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Added option "-lines" for "nag_fcalls95" in "nag_tools.mk". Added documentation. Leading spaces removed in "REPLY" in "etat0_lim.sh". "gcm.sh" does not require "coefoz_LMDZ.nc" to be present.
Removed test on coefoz_LMDZ in gcm.sh. Added test on nbtr in ini_histhf3d and write_histhf3d. Added test on nqmax in phytrac.
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