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Change all `.f` suffixes to `.f90`. (The opposite was done in revision 82.) Because of change of philosopy in GNUmakefile: we already had a rewritten rule for `.f`, so it does not make the makefile longer to replace it by a rule for `.f90`. And it spares us options of makedepf90 and of the compiler. Also we prepare the way for a simpler `CMakeLists.txt`.
Move Sources/* to root directory.
Sources inside, compilation outside.
Changed all ".f90" suffixes to ".f".
Moved everything out of libf.
"alpha" useless, always 0, in "exner_hyb".
Created intermediary variable for meridional wind in "calfis". Removed unused variables. Removed argument "firstcal" of "physiq", made it a local variable. Removed unused argument "v" of "phytrac".
Imported Source files of the external library "IOIPSL_Lionel" into "libf/IOIPSL". Split "cray.f90" into "scopy.f90" and "ssum.f90". Rewrote "leapfrog" in order to have a clearer algorithmic structure.
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