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Move Sources/* to root directory.
LMDZE is now in Fortran 2003 (use of allocatable arguments). gradsdef was not used. Change names: [uv]10m to [uv]10m_srf in clmain, y[uv]1 to [uv]1lay. Remove useless complication: zx_alf[12]. Do not modify [uv]1lay after initial definition from [uv]. Add [uv]10m_srf to output. Change names in physiq: [uv]10m to [uv]10m_srf, z[uv]10m to [uv]10m, corresponding to NetCDF output names. Remove unused complication couchelimite and useless variable inirnpb in phytrac.
dynetat0 read rlonu, rlatu, rlonv, rlatv, cu_2d, cv_2d, aire_2d from "start.nc" and then these variables were overwritten by inigeom. Corrected this. Now, inigeom does not compute rlonu, rlatu, rlonv and rlatv. Moreover, cu_2d, cv_2d, aire_2d are not written to "restart.nc". Since xprimu, xprimv, xprimm025, xprimp025, rlatu1, rlatu2, yprimu1, yprimu2 are computed at the same time as rlonu, rlatu, rlonv, rlatv, and since it would not be convenient to separate those computations, we decide to write xprimu, xprimv, xprimm025, xprimp025, rlatu1, rlatu2, yprimu1, yprimu2 into "restart.nc", read them from "start.nc" and not compute them in inigeom. So, in summary, "start.nc" contains all the coordinates and their derivatives, and inigeom only computes the 2D-variables. Technical details: Moved variables rlatu, rlonv, rlonu, rlatv, xprimu, xprimv from module comgeom to module dynetat0_m. Upgraded local variables rlatu1, yprimu1, rlatu2, yprimu2, xprimm025, xprimp025 of procedure inigeom to variables of module dynetat0_m. Removed unused local variable yprimu of procedure inigeom and corresponding argument yyprimu of fyhyp. Moved variables clat, clon, grossismx, grossismy, dzoomx, dzoomy, taux, tauy from module serre to module dynetat0_m (since they are read from "start.nc"). The default values are now defined in read_serre instead of in the declarations. Changed name of module serre to read_serre_m, no more module variable here. The calls to fxhyp and fyhyp are moved from inigeom to etat0. Side effects in programs other than gcm: etat0 and read_serre write variables of module dynetat0; the programs test_fxyp and test_inter_barxy need more source files. Removed unused arguments len and nd of cv3_tracer. Removed unused argument PPSOL of LWU. Bug fix in test_inter_barxy: forgotten call to read_serre.
Sources inside, compilation outside.
Changed all ".f90" suffixes to ".f".
Moved procedure inigeom into module comgeom. In disvert, renamed s_sampling to vert_sampling, following LMDZ. Removed choice strato1. In case read, read ap and bp instead of s (following LMDZ). Added argument phis to start_init_orog and start_init_dyn, and removed variable phis of module start_init_orog_m. In etat0 and start_init_orog, renamed relief to zmea_2d. In start_init_dyn, renamed psol to ps. In start_init_orog, renamed relief_hi to relief. No need to set phis(iim + 1, :) = phis(1, :), already done in grid_noro. Documentation for massbar out of SVN, in massbar.txt. Documentation was duplicated in massdair, but not relevant in massdair. In conflx, no need to initialize pen_[ud] and pde_[ud]. In flxasc, used intermediary variable fact (following LMDZ). In grid_noro, added local variable zmea0 for zmea not smoothed and computed zphi from zmea instead of zmea0 (following LMDZ). This changes the results of ce0l. Removed arguments pen_u and pde_d of phytrac and nflxtr, which were not used.
Moved everything out of libf.
Renamed tpot to teta and psol to ps in etat0. Replaced calls to flincom by calls to NetCDF95 in startdyn. lon_ini, lat_ini and levdyn_ini are now pointers.
Split "flincom.f90" into "flinclo.f90", "flinfindcood.f90",
"flininfo.f90" and "flinopen_nozoom.f90", in directory
"IOIPSL/Flincom".
Renamed "etat0_lim" to "ce0l", as in LMDZ.
Split "readsulfate.f" into "readsulfate.f90", "readsulfate_preind.f90"
and "getso4fromfile.f90".
In etat0, renamed variable q3d to q, as in "dynredem1". Replaced calls
to Flicom procedures by calls to NetCDF95.
In leapfrog, added call to writehist.
Extracted ASCII art from "grid_noro" into a file
"grid_noro.txt". Transformed explicit-shape local arrays into
automatic arrays, so that test on values of iim and jjm is no longer
needed. Test on weight:
IF (weight(ii, jj) /= 0.) THEN
is useless. There is already a test before:
if (any(weight == 0.)) stop "zero weight in grid_noro"
In "aeropt", replaced duplicated lines with different values of inu by
a loop on inu.
Removed arguments of "conf_phys". Corresponding variables are now
defined in "physiq", in a namelist. In "conf_phys", read a namelist
instead of using getin.
Removed Numerical Recipes procedure "ran1". Replaced calls to "ran1" in "inidissip" by calls to intrinsic procedures. Split file "interface_surf.f90" into a file with a module containing only variables, "interface_surf", and single-procedure files. Gathered files into directory "Interface_surf". Added argument "cdivu" to "gradiv" and "gradiv2", "cdivh" to "divgrad2" and "divgrad", and "crot" to "nxgraro2" and "nxgrarot". "dissip" now uses variables "cdivu", "cdivh" and "crot" from module "inidissip_m", so it can pass them to "gradiv2", etc. Thanks to this modification, we avoid a circular dependency betwwen "inidissip.f90" and "gradiv2.f90", etc. The value -1. used by "gradiv2", for instance, during computation of eigenvalues is not the value "cdivu" computed by "inidissip". Extracted procedure "start_inter_3d" from module "startdyn", to its own module. In "inidissip", unrolled loop on "ii". I find it clearer now. Moved variables "matriceun", "matriceus", "matricevn", "matricevs", "matrinvn" and "matrinvs" from module "parafilt" to module "inifilr_m". Moved variables "jfiltnu", "jfiltnv", "jfiltsu", "jfiltsv" from module "coefils" to module "inifilr_m".
Replaced calls to "flinget" by calls to "NetCDF95".
"start_init_phys" is now called directly by "etat0" instead of through "start_init_dyn". "qsol_2d" is no longer a variable of module "start_init_phys_m", it is an argument of "start_init_phys". "start_init_dyn" now receives "tsol_2d" from "etat0". Split file "vlspltqs.f" into "vlspltqs.f90", "vlxqs.f90" and ""vlyqs.f90". In "start_init_orog", replaced calls to "flin*" by calls to NetCDF95.
Removed programs "test_inter_barxy" and "test_disvert". Added option "read" for "s_sampling" in "disvert".
"alpha" useless, always 0, in "exner_hyb".
"pi" comes from "nr_util". Removed subroutine "initialize" in module "comconst". Copied the content of "fxy_sin.h" into "fxysinus", instead of getting it from an "include" line. Removed file "fxy_sin.h". "ps" has rank 2 in "gcm" and "dynetat0". Assumed-shape for argument "q" of "integrd".
Now using the library "NR_util".
Split "stringop.f90" into single-procedure files. Gathered files in directory "IOIPSL/Stringop". Split "flincom.f90" into "flincom.f90" and "flinget.f90". Removed unused procedures from module "flincom". Removed unused argument "filename" of procedure "flinopen_nozoom". Removed unused files. Split "grid_change.f90" into "grid_change.f90" and "gr_phy_write_3d.f90". Removed unused procedures from modules "calendar", "ioipslmpp", "grid_atob", "gath_cpl" and "getincom". Removed unused procedures in files "ppm3d.f" and "thermcell.f". Split "mathelp.f90" into "mathelp.f90" and "mathop.f90". Removed unused variable "dpres" of module "comvert". Use argument "itau" instead of local variables "iadvtr" and "first" to control algorithm in procedure "fluxstokenc". Removed unused arguments of procedure "integrd". Removed useless computations at the end of procedure "leapfrog". Merged common block "matrfil" into module "parafilt".
Imported Source files of the external library "IOIPSL_Lionel" into "libf/IOIPSL". Split "cray.f90" into "scopy.f90" and "ssum.f90". Rewrote "leapfrog" in order to have a clearer algorithmic structure.
Created directory "phylmd/Radlwsw". Split "radlwsw.f" in files containing a single procedure. Removed variable "itaufinp1" in "leapfrog".
Split "orografi.f": one file for each procedure. Put the created files in new directory "Orography". Removed argument "vcov" of procedure "sortvarc". Removed arguments "itau" and "time" of procedure "caldyn0". Removed arguments "itau", "time" and "vcov" of procedure "sortvarc0". Removed argument "time" of procedure "dynredem1". Removed NetCDF variable "temps" in files "start.nc" and "restart.nc", because its value is always 0. Removed argument "nq" of procedures "iniadvtrac" and "leapfrog". The number of "tracers read in "traceur.def" must now be equal to "nqmx", or "nqmx" must equal 4 if there is no file "traceur.def". Replaced variable "nq" by constant "nqmx" in "leapfrog". NetCDF variable for ozone field in "coefoz.nc" must now be called "tro3" instead of "r". Fixed bug in "zenang".
Deleted argument "presnivs" of "physiq", "ini_histhf", "ini_histhf3d", "ini_histday", "ini_histins", "ini_histrac", "phytrac". Access it from "comvert" instead. Replaced calls to NetCDF Fortran 77 interface by calls to Fortran 90 interface or to NetCDF95. Procedure "gr_phy_write_3d" now works with a variable of arbitrary size in the second dimension. Annotated use statements with "only" clause. Replaced calls to NetCDF interface version 2 by calls to Fortran 90 interface in "guide.f90" and "read_reanalyse.f". In "write_histrac", replaced calls to "gr_fi_ecrit" by calls to "gr_phy_write_2d" and "gr_phy_write_3d".
-- Minor change of behaviour: "etat0" does not compute "rugsrel" nor "radpas". Deleted arguments "radpas" and "rugsrel" of "phyredem". Deleted argument "rugsrel" of "phyetat0". "startphy.nc" does not contain the variable "RUGSREL". In "physiq", "rugoro" is set to 0 if not "ok_orodr". The whole program "etat0_lim" does not use "clesphys2". -- Minor modification of input/output: Created subroutine "read_clesphys2". Variables of "clesphys2" are read in "read_clesphys2" instead of "conf_gcm". "printflag" does not print variables of "clesphys2". -- Should not change any result at run time: References to module "numer_rec" instead of individual modules of "Numer_rec_Lionel". Deleted argument "clesphy0" of "calfis", "physiq", "conf_gcm", "leapfrog", "phyetat0". Deleted variable "clesphy0" in "gcm". "phyetat0" does not modify variables of "clesphys2". The program unit "gcm" does not modify "itau_phy". Added some "intent" attributes. "regr11_lint" does not call "polint".
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