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No reason to call inidissip in ce0l. In inidissip, set random seed to 1 beacuse PGI compiler does not accept all zeros. dq was computed needlessly in caladvtrac. Arguments masse and dq of calfis not used. Replaced real*8 by double precision. Pass arrays with inverted order of vertical levels to conflx instead of creating local variables for this inside conflx.
In procedure, "addfi" access directly the module variable "dtphys" instead of going through an argument. In "conflx", do not create a local variable for temperature with reversed order of vertical levels. Instead, give an actual argument with reversed order in "physiq". Changed names of variables "rmd" and "rmv" from module "suphec_m" to "md" and "mv". In "hgardfou", print only the first temperature out of range found.
Changed handling of compiler in compilation system. Removed the prefix letters "y", "p", "t" or "z" in some names of variables. Replaced calls to NetCDF by calls to NetCDF95. Extracted "ioget_calendar" procedures from "calendar.f90" into a separate file. Extracted to a separate file, "mathop2.f90", procedures that were not part of the generic interface "mathop" in "mathop.f90". Removed computation of "dq" in "bilan_dyn", which was not used. In "iniadvtrac", removed schemes 20 Slopes and 30 Prather. Was not compatible with declarations of array sizes. In "clcdrag", "ustarhb", "vdif_kcay", "yamada4" and "coefkz", changed the size of some arrays from "klon" to "knon". Removed possible call to "conema3" in "physiq". Removed unused argument "cd" in "yamada".
Split "conflx.f" into single-procedure files in directory "Conflx". Split "cv_routines.f" into single-procedure files in directory "CV_routines". Made module "cvparam" from included file "cvparam.h". No included file other than "netcdf.inc" left in LMDZE.
Split "getincom.f90" into "getincom.f90" and "getincom2.f90". Split "nuage.f" into "nuage.f90", "diagcld1.f90" and "diagcld2.f90". Created module "chem" from included file "chem.h". Moved "YOEGWD.f90" to directory "Orography". In "physiq", for evaporation of water, "zlsdcp" was equal to "zlvdc". Removed useless variables.
Extracted ASCII art from "inigeom" into a separate text file in the documentation. "test_disvert" now creates a separate file for layer thicknesses. Moved variables from module "yomcst" to module "suphec_m" because this is where those variables are defined. Kept in "yomcst" only parameters of Earth orbit. Gave the attribute "parameter" to some variables of module "suphec_m". Variables of module "yoethf" were defined in procedure "suphec". Moved these definitions to a new procedure "yoethf" in module "yoethf_m".
-- Minor modification of input/output: Created procedure "read_logic". Variables of module "logic" are read by "read_logic" instead of "conf_gcm". Variable "offline" of module "conf_gcm" is read from namelist instead of "*.def". Deleted arguments "dtime", "co2_ppm_etat0", "solaire_etat0", "tabcntr0" and local variables "radpas", "tab_cntrl" of "phyetat0". "phyetat0" does not read "controle" in "startphy.nc" any longer. "phyetat0" now reads global attribute "itau_phy" from "startphy.nc". "phyredem" does not create variable "controle" in "startphy.nc" any longer. "phyredem" now writes global attribute "itau_phy" of "startphy.nc". Deleted argument "tabcntr0" of "printflag". Removed diagnostic messages written by "printflag" for comparison of the variable "controle" of "startphy.nc" and the variables read from "*.def" or namelist input. -- Removing unwanted functionality: Removed variable "lunout" from module "iniprint", replaced everywhere by standard output. Removed case "ocean == 'couple'" in "clmain", "interfsurf_hq" and "physiq". Removed procedure "interfoce_cpl". -- Should not change anything at run time: Automated creation of graphs in documentation. More documentation on input files. Converted Fortran files to free format: "phyredem.f90", "printflag.f90". Split module "clesphy" into "clesphys" and "clesphys2". Removed variables "conser", "leapf", "forward", "apphys", "apdiss" and "statcl" from module "logic". Added arguments "conser" to "advect", "leapf" to "integrd". Added local variables "forward", "leapf", "apphys", "conser", "apdiss" in "leapfrog". Added intent attributes. Deleted arguments "dtime" of "phyredem", "pdtime" of "flxdtdq", "sh" of "phytrac", "dt" of "yamada". Deleted local variables "dtime", "co2_ppm_etat0", "solaire_etat0", "length", "tabcntr0" in "physiq". Replaced all references to "dtime" by references to "pdtphys".
Added NetCDF directory "/home/guez/include" in "g95.mk" and "nag_tools.mk". Added some "intent" attributes in "PVtheta", "advtrac", "caladvtrac", "calfis", "diagedyn", "dissip", "vlspltqs", "aeropt", "ajsec", "calltherm", "clmain", "cltrac", "cltracrn", "concvl", "conema3", "conflx", "fisrtilp", "newmicro", "nuage", "diagcld1", "diagcld2", "drag_noro", "lift_noro", "SUGWD", "physiq", "phytrac", "radlwsw", "thermcell". Removed the case "ierr == 0" in "abort_gcm"; moved call to "histclo" and messages for end of run from "abort_gcm" to "gcm"; replaced call to "abort_gcm" in "leapfrog" by exit from outer loop. In "calfis": removed argument "pp" and variable "unskap"; changed "pksurcp" from scalar to rank 2; use "pressure_var"; rewrote computation of "zplev", "zplay", "ztfi", "pcvgt" using "dyn_phy"; added computation of "pls". Removed unused variable in "dynredem0". In "exner_hyb": changed "dellta" from scalar to rank 1; replaced call to "ssum" by call to "sum"; removed variables "xpn" and "xps"; replaced some loops by array expressions. In "leapfrog": use "pressure_var"; deleted variables "p", "longcles". Converted common blocks "YOECUMF", "YOEGWD" to modules. Removed argument "pplay" in "cvltr", "diagetpq", "nflxtr". Created module "raddimlw" from include file "raddimlw.h". Corrected call to "new_unit" in "test_disvert".
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