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Move Sources/* to root directory.
Removed intermediary objects of cv_thermo_m, access suphec_m directly. Procedure cv_thermo disappeared, all objects are named constants. In cv_driver and below, limited extents of arrays to what is needed. lv, cpn and th in cv30_compress were set at level nl + 1 but lv1, cpn1 and th1 are not defined at this level. This did not lead to an error because values at nl + 1 were not used. Removed test on ok_sync in phystokenc because it is not read at run time. Printing min and max of output NetCDF variables is heavy and archaic. Used histwrite_phy in phytrac.
Removed variables nk1 and nk in cv_driver and below. These arrays were just equal to the constant minorig. (This is also the case in LMDZ.) In cv_thermo, removed some variables which were copies of variables of suphec_m. Changed some variables to named constants.
Removed argument icbmax of cv30_feed, not used in cv_driver (not used in LMDZ either). Clearer to have iflag1 = 0 in cv30_feed than in cv_driver. Clearer to have iflag1 = 42 in cv30_uncompress than in cv_driver. Removed argument iflag of cv30_compress. Since there is iflag1 = 42 in cv30_uncompress, iflag1 that comes out of cv_driver is disconnected from iflag1 computed by cv30_feed and cv30_trigger. Removed some references to convect3 and convect4 in comments. This program derives from the convect3 version, we do not need to know about other versions. Bug fix in cv30_undilute1: icbs1 was not made >= 2.
Created module cv_thermo_m around procedure cv_thermo. Moved variables from module cvthermo to module cv_thermo_m, where they are defined. In ini_histins and initphysto, using part of rlon and rlat from phyetat0_m is pretending that we do not know about the dynamical grid, while the way we extract zx_lon(:, 1) and zx_lat(1, :) depends on ordering inside rlon and rlat. So we might as well simplify and clarify by using directly rlonv and rlatu. Removed intermediary variables in write_histins and phystokenc.
Replaced integer variable iflag_con of module clesphys2 by logical variable conv_emanuel.
Sources inside, compilation outside.
Changed all ".f90" suffixes to ".f".
Moved everything out of libf.
Deleted files cvparam3.f90 and nuagecom.f90. Moved variables from module cvparam3 to module cv3_param_m. Moved variables rad_chau1 and rad_chau2 from module nuagecom to module conf_phys_m. Read clesphys2_nml from conf_phys instead of gcm. Removed argument iflag_con from several procedures. Access module variable instead.
LMDZE now uses library Jumble. Removed all calls to "flinget". Replaced calls to "flinget", "flininfo", "flinopen_nozoom" by calls to NetCDF95 and Jumble. Split file "cv_driver.f" into "cv_driver.f90", "cv_flag.f90" and "cv_thermo.f90". Bug fix: "QANCIEN" was read twice in "phyeytat0". In "physiq", initialization of "d_t", "d_u", "d_v" was useless.
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