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Move Sources/* to root directory.
LMDZE is now in Fortran 2003 (use of allocatable arguments). gradsdef was not used. Change names: [uv]10m to [uv]10m_srf in clmain, y[uv]1 to [uv]1lay. Remove useless complication: zx_alf[12]. Do not modify [uv]1lay after initial definition from [uv]. Add [uv]10m_srf to output. Change names in physiq: [uv]10m to [uv]10m_srf, z[uv]10m to [uv]10m, corresponding to NetCDF output names. Remove unused complication couchelimite and useless variable inirnpb in phytrac.
run_off_lic downgraded from variable of module interface_surf to local variable of fonte_neige. Code could not work with ok_aie set to true, so removed this possibility. tauae, piz_ae, cg_ae, topswai, solswai were then 0. cldtaupi was the same as cldtaupd. In sw and procedures called by sw, flag_aer did not need to be double precision, changed it to logical. Downgraded re and fl from arguments of newmicro to local variables. Added output of re and fl (following LMDZ).
Removed module conema3_m. Moved variables epmax and iflag_clw of conema3_m to conf_phys_m, where they are defined. Removed unused variable ok_adj_ema of conema3_m. Added variables d_t_ec, dtsw0 and dtlw0 to histins.nc (following LMDZ). Removed case not lessivage in phytrac. (Not used in LMDZ without INCA either.)
Added argument itau_phy to ini_histins, phyetat0, phytrac and phyredem0. Removed variable itau_phy of module temps. Avoiding side effect in etat0 and phyetat0. The procedures ini_histins, phyetat0, phytrac and phyredem0 are all called by physiq so there is no cascading variable penalty. In procedure inifilr, made the condition on colat0 weaker to allow for rounding error. Removed arguments flux_o, flux_g and t_slab of clmain, flux_o and flux_g of clqh and interfsurf_hq, tslab and seaice of phyetat0 and phyredem. NetCDF variables TSLAB and SEAICE no longer in restartphy.nc. All these variables were related to the not-implemented slab ocean. seaice and tslab were just set to 0 in phyetat0 and never used nor changed. flux_o and flux_g were computed in clmain but never used in physiq. Removed argument swnet of clqh. Was used only to compute a local variable, swdown, which was not used.
In inifilr_hemisph, colat0 is necessarily >= 1. / rlamda(iim) (see notes) so we simplify the definition of jfilt. No need to keep modfrst values at other latitudes than the current one, and we can have one loop on latitudes instead of two. Just encapsulated transp into a module.
Sources inside, compilation outside.
Removed intermediate variables in calcul_fluxs.
Changed all ".f90" suffixes to ".f".
Moved everything out of libf.
Split "conflx.f" into single-procedure files in directory "Conflx". Split "cv_routines.f" into single-procedure files in directory "CV_routines". Made module "cvparam" from included file "cvparam.h". No included file other than "netcdf.inc" left in LMDZE.
Split "getincom.f90" into "getincom.f90" and "getincom2.f90". Split "nuage.f" into "nuage.f90", "diagcld1.f90" and "diagcld2.f90". Created module "chem" from included file "chem.h". Moved "YOEGWD.f90" to directory "Orography". In "physiq", for evaporation of water, "zlsdcp" was equal to "zlvdc". Removed useless variables.
Extracted ASCII art from "inigeom" into a separate text file in the documentation. "test_disvert" now creates a separate file for layer thicknesses. Moved variables from module "yomcst" to module "suphec_m" because this is where those variables are defined. Kept in "yomcst" only parameters of Earth orbit. Gave the attribute "parameter" to some variables of module "suphec_m". Variables of module "yoethf" were defined in procedure "suphec". Moved these definitions to a new procedure "yoethf" in module "yoethf_m".
Added NetCDF directory "/home/guez/include" in "g95.mk" and "nag_tools.mk". Added some "intent" attributes in "PVtheta", "advtrac", "caladvtrac", "calfis", "diagedyn", "dissip", "vlspltqs", "aeropt", "ajsec", "calltherm", "clmain", "cltrac", "cltracrn", "concvl", "conema3", "conflx", "fisrtilp", "newmicro", "nuage", "diagcld1", "diagcld2", "drag_noro", "lift_noro", "SUGWD", "physiq", "phytrac", "radlwsw", "thermcell". Removed the case "ierr == 0" in "abort_gcm"; moved call to "histclo" and messages for end of run from "abort_gcm" to "gcm"; replaced call to "abort_gcm" in "leapfrog" by exit from outer loop. In "calfis": removed argument "pp" and variable "unskap"; changed "pksurcp" from scalar to rank 2; use "pressure_var"; rewrote computation of "zplev", "zplay", "ztfi", "pcvgt" using "dyn_phy"; added computation of "pls". Removed unused variable in "dynredem0". In "exner_hyb": changed "dellta" from scalar to rank 1; replaced call to "ssum" by call to "sum"; removed variables "xpn" and "xps"; replaced some loops by array expressions. In "leapfrog": use "pressure_var"; deleted variables "p", "longcles". Converted common blocks "YOECUMF", "YOEGWD" to modules. Removed argument "pplay" in "cvltr", "diagetpq", "nflxtr". Created module "raddimlw" from include file "raddimlw.h". Corrected call to "new_unit" in "test_disvert".
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