#!/bin/bash function log() { echo $* $* } function full_dir() { (cd -P $1 ; pwd) } #--------------- Generate kernels, invoked by : './make_python kernels' --------------- function update() { diff $2 $1 || log cp -pr $1 $2 } function cmd_clean() # this function is invoked by : './make_python clean' { rm -f lib/*.so lib/dynamico cd $KERNELS/src rm -rf *.o *.so build/ } function cmd_kernels() # this function is invoked by : './make_python kernels' { cd $KERNELS ./codegen hexagonal unstructured cd $KERNELS/src/hexagonal for x in *.k90 ; do update "$x" "$DYNAMICO_ROOT/src/kernels_hex/$x" done cd $KERNELS/src/unstructured for x in *.k90 ; do update "$x" "$DYNAMICO_ROOT/src/kernels_unst/$x" done # make sure to recompile dynamics cd $DYNAMICO_ROOT touch src/dynamics/*.F90 src/diagnostics/*.F90 src/transport/*.F90 src/unstructured/*.F90 } #------------------ Default action , invoked by : './make_python' -------------------- function make_so() { ARLIB=$1 SOLIB=$2 if [[ $ARLIB -nt $SOLIB ]]; then echo $ARLIB is newer than $SOLIB rm -f tmp.a cp $ARLIB tmp.a if [[ "$4" != "" ]] ; then ar vd tmp.a $4 ; fi if [[ "$5" != "" ]] ; then ar vr tmp.a $5 ; fi log $LINK $SOFLAGS $WHOLE_ARCHIVE tmp.a $NO_WHOLE_ARCHIVE $3 -o $SOLIB rm -f tmp.a $LDD $SOLIB fi } function cmd_() { echo "XIOS_ROOTDIR : $XIOS_ROOTDIR" MISSING="" for module in netCDF4 jinja2 mpi4py; do echo "import $module" python -c "import $module" || MISSING="$MISSING $module" done if [[ "$MISSING" == "" ]] ; then echo "All required Python modules seem present." else echo "Missing/dysfunctional python modules : $MISSING" echo "Please fix your Python configuration" exit fi log mpicc -c -std=c99 -fPIC $PARMETIS_CFLAGS Python/src/partition.c -o obj/partition.o make_so $XIOS_ROOTDIR/lib/libxios.a $LIBDIR/libxios.so "$NETCDF_LDFLAGS" make_so $LIBDIR/libicosa.a $LIBDIR/libicosa.so "-L$LIBDIR -lxios $KERNELS_LDFLAGS" "physics_external_mod.o physics_mod.o timeloop_gcm_mod.o icosa_init_mod.o" obj/partition.o # Cythonize Python modules cd $DYNAMICO_ROOT/Python/src NUMPY=$(python -c 'import numpy as np ; print np.get_include()') CYTHONFLAGS="$SOFLAGS $LDFLAGS -L$LIBDIR -licosa $KERNELS_LDFLAGS" LDSHARED="$LINK" CFLAGS="-fno-strict-aliasing -O2 -I$NUMPY" LDFLAGS="$CYTHONFLAGS" log python setup.py build_ext --inplace || exit cp -fpr $DYNAMICO_ROOT/Python/dynamico $DYNAMICO_ROOT/lib cp -fp *.so $DYNAMICO_ROOT/lib/dynamico/ cd $DYNAMICO_ROOT for module in xios meshes dyn time_step DCMIP; do echo "from dynamico import $module" python -c "from dynamico import $module" done } #------------------------- script starts here ------------------------ DYNAMICO_ROOT=$PWD LIBDIR=$DYNAMICO_ROOT/lib KERNELS=$DYNAMICO_ROOT/Python . arch.env . arch.path echo "Selected architecture : $CURRENT_ARCH" if [[ "$CURRENT_ARCH" == "" ]] ; then echo "Current architecture undefined or unsupported" ; exit ; fi . Python/env/${CURRENT_ARCH}.env cmd_$1