# # ChangeLog for codes/icosagcm # # Generated by Trac 1.0.1 # 06/16/24 13:58:55 Thu, 03 May 2018 15:26:18 GMT dubos [691] * codes/icosagcm/devel/Python/dynamico/parallel.py (modified) devel/Python : bugfix, on Irene all2all corrupts its argument ? Thu, 03 May 2018 15:24:02 GMT dubos [690] * codes/icosagcm/devel/Python/test/xml/filedef_simple.xml (modified) devel/Python : fix XML Mon, 09 Apr 2018 13:24:15 GMT dubos [689] * codes/icosagcm/devel/Python/dynamico/meshes.py (modified) * codes/icosagcm/devel/Python/src/functions.h (modified) * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) devel/unstructured : select double or single precision for physical ... Mon, 09 Apr 2018 13:22:10 GMT dubos [688] * codes/icosagcm/devel/src/unstructured/caldyn_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/data_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/timestep_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/transfer_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/transport_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/unstructured.h90 (added) devel/unstructured : select double or single precision for physical ... Thu, 08 Mar 2018 12:05:02 GMT dubos [687] * codes/icosagcm/devel/Python/dynamico/meshes.py (modified) * codes/icosagcm/devel/Python/src/kernels_transport.jin (modified) * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) * codes/icosagcm/devel/Python/test/py/DCMIP2008c5.py (modified) devel/unstructured : piecewise-constant vertical remapping Thu, 08 Mar 2018 11:48:37 GMT dubos [686] * codes/icosagcm/devel/src/icosa_init.f90 (modified) * codes/icosagcm/devel/src/kernels_unst/caldyn_wflux.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/compute_NH_geopot.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/compute_geopot.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/remap_eta.k90 (added) * codes/icosagcm/devel/src/kernels_unst/remap_theta.k90 (added) * codes/icosagcm/devel/src/kernels_unst/remap_u.k90 (added) * codes/icosagcm/devel/src/kernels_unst/theta.k90 (modified) * codes/icosagcm/devel/src/unstructured/transport_unstructured.F90 (added) devel/unstructured : piecewise-constant vertical remapping Wed, 07 Mar 2018 17:43:51 GMT dubos [685] * codes/icosagcm/devel/Python/src/hexagonal/macros.jin (modified) * codes/icosagcm/devel/Python/src/kernels_caldyn_NH.jin (modified) * codes/icosagcm/devel/Python/src/kernels_caldyn_hevi.jin (modified) * codes/icosagcm/devel/Python/src/kernels_caldyn_hydro.jin (modified) * codes/icosagcm/devel/Python/src/kernels_transport.jin (modified) * codes/icosagcm/devel/Python/src/unstructured/macros.jin (modified) devel/unstructured : towards vertical remapping Wed, 07 Mar 2018 11:58:33 GMT dubos [684] * codes/icosagcm/devel/src/unstructured/transfer_unstructured.F90 (modified) devel/unstructured : fix no-MPI Wed, 07 Mar 2018 10:18:39 GMT dubos [683] * codes/icosagcm/devel/src/kernels_unst/coriolis.k90 (modified) * codes/icosagcm/devel/src/unstructured/data_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/timestep_unstructured.F90 (modified) devel/unstructured : cleanup Fri, 16 Feb 2018 17:06:01 GMT dubos [682] * codes/icosagcm/devel/Python/dynamico/meshes.py (modified) * codes/icosagcm/devel/Python/dynamico/parallel.py (modified) * codes/icosagcm/devel/Python/test/fig_DCMIP2008c5 (modified) * codes/icosagcm/devel/Python/test/fig_morton (modified) * codes/icosagcm/devel/Python/test/py/test_xios.py (modified) * codes/icosagcm/devel/Python/test/xml/field_def_simple.xml (modified) * codes/icosagcm/devel/Python/test/xml/filedef_simple.xml (modified) devel/unstructured : XIOS output with MPI Tue, 13 Feb 2018 23:06:52 GMT dubos [681] * codes/icosagcm/devel/Python/dynamico/meshes.py (modified) * codes/icosagcm/devel/Python/dynamico/parallel.py (modified) * codes/icosagcm/devel/Python/dynamico/util.py (modified) * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) * codes/icosagcm/devel/Python/test/py/RSW2_MPAS_W02.py (modified) * codes/icosagcm/devel/src/unstructured/data_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/timestep_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/transfer_unstructured.F90 (added) devel/unstructured : local mesh setup + halo exchange Fri, 09 Feb 2018 15:24:33 GMT dubos [680] * codes/icosagcm/devel/Python/dynamico/meshes.py (modified) * codes/icosagcm/devel/Python/dynamico/util.py (added) * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) * codes/icosagcm/devel/Python/test/py/DCMIP2008c5.py (modified) * codes/icosagcm/devel/Python/test/py/NH_3D_DCMIP31.py (modified) * codes/icosagcm/devel/Python/test/py/RSW2_MPAS_W02.py (modified) * codes/icosagcm/devel/Python/test/py/RSW_MPAS_W02.py (modified) * codes/icosagcm/devel/Python/test/py/partition.py (modified) * codes/icosagcm/devel/Python/test/py/test_xios.py (modified) devel/unstructured : moved mesh partitioning code into meshes.py Thu, 08 Feb 2018 14:36:37 GMT dubos [679] * codes/icosagcm/devel/Python/test/fig_DCMIP2008c5 (added) * codes/icosagcm/devel/Python/test/py/DCMIP2008c5.py (added) devel/unstructured : orographic Rossby wave test case from DCMIP 2008 Thu, 08 Feb 2018 14:35:25 GMT dubos [678] * codes/icosagcm/devel/Python/test/py/NH_3D_DCMIP31.py (modified) devel/unstructured : fixed scaling factors in DCMIP31 Thu, 08 Feb 2018 14:28:09 GMT dubos [677] * codes/icosagcm/devel/src/unstructured/timestep_unstructured.F90 (modified) devel/unstructured : bugfix for mass coordinate + hydrostatic Wed, 31 Jan 2018 17:48:48 GMT dubos [676] * codes/icosagcm/devel/Python/test/py/NH_3D_DCMIP31.py (modified) * codes/icosagcm/devel/Python/test/python.sh (modified) devel/unstructured : update DCMIP 3.1 test case Wed, 31 Jan 2018 17:46:37 GMT dubos [675] * codes/icosagcm/devel/src/unstructured/data_unstructured.F90 (modified) devel/unstructured : bugfix profiling Wed, 31 Jan 2018 14:14:35 GMT dubos [674] * codes/icosagcm/devel/Python/dynamico/meshes.py (modified) * codes/icosagcm/devel/Python/src/partition.c (modified) * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) * codes/icosagcm/devel/Python/test/fig_morton (added) * codes/icosagcm/devel/Python/test/py/reorder.py (added) devel/unstructured : mesh reordering (Morton) Wed, 31 Jan 2018 14:12:00 GMT dubos [673] * codes/icosagcm/devel/Python/test/py/NH_3D_DCMIP31.py (modified) devel/unstructured : update DCMIP 3.1 test case Tue, 30 Jan 2018 16:58:02 GMT dubos [672] * codes/icosagcm/devel/Python/dynamico/meshes.py (modified) * codes/icosagcm/devel/Python/test/py/RSW_MPAS_W02.py (modified) * codes/icosagcm/devel/Python/test/py/partition.py (modified) devel/unstructured : Fix partitioning Tue, 30 Jan 2018 16:56:59 GMT dubos [671] * codes/icosagcm/devel/Python/env/X64_OSX.env (modified) devel/unstructured : Fix MacOSX environment Tue, 30 Jan 2018 16:56:22 GMT dubos [670] * codes/icosagcm/devel/Python/dynamico/__init__.py (modified) * codes/icosagcm/devel/src/unstructured/data_unstructured.F90 (modified) devel/unstructured : print fine-grained profile info every second at ... Tue, 30 Jan 2018 14:28:08 GMT dubos [669] * codes/icosagcm/trunk/src/base/earth_const.f90 (modified) * codes/icosagcm/trunk/src/vertical/disvert_std.f90 (modified) trunk/disvert : set pa=preff/2 rather than hard-coded pa=50000 Fri, 26 Jan 2018 23:10:07 GMT dubos [668] * codes/icosagcm/trunk/src/diagnostics/observable.f90 (modified) * codes/icosagcm/trunk/src/diagnostics/wind.F90 (modified) * codes/icosagcm/trunk/src/icosa_init.f90 (modified) * codes/icosagcm/trunk/src/physics/physics.f90 (modified) trunk : compute and output physics tendencies on the dynamics side Wed, 24 Jan 2018 17:49:49 GMT dubos [667] * codes/icosagcm/trunk/src/base/profiling.f90 (added) * codes/icosagcm/trunk/src/icosa_init.f90 (modified) * codes/icosagcm/trunk/src/output/output_field.f90 (modified) * codes/icosagcm/trunk/src/parallel/mpipara.F90 (modified) * codes/icosagcm/trunk/src/parallel/transfert_mpi.f90 (modified) * codes/icosagcm/trunk/src/time/timeloop_gcm.f90 (modified) trunk : basic coarse-grain profiling Sat, 20 Jan 2018 17:47:41 GMT dubos [666] * codes/icosagcm/devel/Python/dynamico/__init__.py (modified) * codes/icosagcm/devel/Python/test/py/RSW2_MPAS_W02.py (modified) * codes/icosagcm/devel/Python/test/py/slice_GW_NH.py (modified) devel/unstructured : python fixes Sat, 20 Jan 2018 17:46:10 GMT dubos [665] * codes/icosagcm/devel/src/unstructured/caldyn_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/data_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/timestep_unstructured.F90 (modified) devel/unstructured : OpenMP fixes Fri, 19 Jan 2018 22:44:27 GMT dubos [664] * codes/icosagcm/devel/Python/dynamico/libs.py (added) devel/Python : fix numpy messing up OpenMP Fri, 19 Jan 2018 22:43:11 GMT dubos [663] * codes/icosagcm/devel/Python/dynamico/__init__.py (modified) * codes/icosagcm/devel/Python/dynamico/wrap.py (modified) * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) * codes/icosagcm/devel/Python/src/xios.pyx (modified) * codes/icosagcm/devel/Python/test/py/test_xios.py (modified) * codes/icosagcm/devel/src/unstructured/data_unstructured.F90 (modified) devel/Python : fix numpy messing up OpenMP Fri, 19 Jan 2018 22:42:11 GMT dubos [662] * codes/icosagcm/devel/make_python (modified) devel/Python : force python to use our libraries Fri, 19 Jan 2018 22:33:00 GMT dubos [661] * codes/icosagcm/devel/Python/test/python.sh (modified) * codes/icosagcm/devel/Python/test/strace.sh (added) * codes/icosagcm/devel/arch/arch-X64_CURIE.path (modified) devel/Python : force python to use our libraries Fri, 19 Jan 2018 22:29:46 GMT dubos [660] * codes/icosagcm/devel/Python/test/fig_slice_GW_NH (added) devel/Python/test : missing output dir Sat, 30 Dec 2017 01:01:51 GMT dubos [659] * codes/icosagcm/devel/Python/src/kernels_caldyn_NH.jin (modified) devel/codegen : update NH kernels Sat, 30 Dec 2017 01:00:38 GMT dubos [658] * codes/icosagcm/devel/src/kernels_unst/caldyn_dmass.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/caldyn_fast.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/caldyn_mil.k90 (added) * codes/icosagcm/devel/src/kernels_unst/caldyn_slow_NH.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/caldyn_slow_hydro.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/caldyn_solver.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/caldyn_vert.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/caldyn_vert_NH.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/compute_NH_geopot.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/coriolis.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/div.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/gradient.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/pvort_only.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/theta.k90 (modified) * codes/icosagcm/devel/src/unstructured/caldyn_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/data_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/timestep_unstructured.F90 (modified) devel/unstructured : updated kernels Sat, 30 Dec 2017 00:56:49 GMT dubos [657] * codes/icosagcm/devel/src/dynamics/caldyn_kernels_hevi.F90 (modified) * codes/icosagcm/devel/src/kernels_hex/caldyn_mil.k90 (added) * codes/icosagcm/devel/src/kernels_hex/caldyn_solver.k90 (modified) * codes/icosagcm/devel/src/kernels_hex/compute_NH_geopot.k90 (modified) devel/hex : updated kernels Sat, 30 Dec 2017 00:06:26 GMT dubos [656] * codes/icosagcm/devel/Python/test/py/NH_3D_bubble.py (modified) * codes/icosagcm/devel/Python/test/py/slice_GW_NH.py (modified) * codes/icosagcm/devel/Python/test/py/slice_GW_hydro.py (modified) devel/unstructured : some improvement of test cases Sat, 30 Dec 2017 00:03:56 GMT dubos [655] * codes/icosagcm/devel/arch/arch-X64_CURIE.env (modified) * codes/icosagcm/devel/arch/arch-X64_CURIE.fcm (modified) devel : upgrade Curie config to ifort 18 Fri, 29 Dec 2017 09:52:14 GMT dubos [654] * codes/icosagcm/devel/make_python (modified) devel : minor bigfix make_python Thu, 28 Dec 2017 13:57:54 GMT dubos [653] * codes/icosagcm/devel/Python/src/unstructured/macros.jin (modified) devel/unstructured : streamline loop unrolling Thu, 28 Dec 2017 11:42:54 GMT dubos [652] * codes/icosagcm/devel/src/unstructured/timestep_unstructured.F90 (modified) devel/unstructured : basic profiling Thu, 28 Dec 2017 11:42:10 GMT dubos [651] * codes/icosagcm/devel/src/unstructured/data_unstructured.F90 (modified) devel/unstructured : basic profiling Fri, 22 Dec 2017 00:35:23 GMT dubos [650] * codes/icosagcm/devel/Python/src/macros.jin (modified) * codes/icosagcm/devel/Python/src/unstructured/macros.jin (modified) * codes/icosagcm/devel/src/unstructured/caldyn_unstructured.F90 (modified) devel/unstructured : more loop unrolling Thu, 21 Dec 2017 21:55:38 GMT aslmd [649] * codes/icosagcm/trunk/src/diagnostics/check_conserve.f90 (modified) added angular momentum diagnostics associated with either positive or ... Thu, 21 Dec 2017 21:38:57 GMT aslmd [648] * codes/icosagcm/trunk/src/dissip/dissip_gcm.f90 (modified) added an option for simple Rayleigh friction at bottom (giant planets, ... Thu, 21 Dec 2017 14:13:40 GMT dubos [647] * codes/icosagcm/devel/Python/src/unstructured/macros.jin (modified) devel/unstructured : more unrolling of stencil loops + bugfix (TRiSK ... Thu, 21 Dec 2017 14:11:18 GMT dubos [646] * codes/icosagcm/devel/Python/test/py/NH_3D_bubble.py (modified) * codes/icosagcm/devel/Python/test/py/slice_GW_NH.py (modified) * codes/icosagcm/devel/Python/test/py/slice_GW_hydro.py (modified) devel/unstructured : update some test cases Wed, 20 Dec 2017 14:47:20 GMT dubos [645] * codes/icosagcm/devel/src/unstructured/caldyn_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/timestep_unstructured.F90 (modified) devel/unstructured : OpenMP bugfix Wed, 20 Dec 2017 14:40:06 GMT dubos [644] * codes/icosagcm/devel/Python/src/unstructured/macros.jin (modified) devel/unstructured : unroll loops over stencils Tue, 19 Dec 2017 15:27:19 GMT dubos [643] * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) devel/unstructured : workaround cython bug Tue, 19 Dec 2017 14:26:51 GMT dubos [642] * codes/icosagcm/devel/Python/dynamico/meshes.py (modified) * codes/icosagcm/devel/Python/src/functions.h (modified) * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) * codes/icosagcm/devel/Python/test/fig_RSW2_MPAS_W02 (modified) * codes/icosagcm/devel/Python/test/py/NH_3D_bubble.py (modified) * codes/icosagcm/devel/Python/test/py/RSW2_MPAS_W02.py (modified) * codes/icosagcm/devel/Python/test/py/slice_GW_hydro.py (modified) * codes/icosagcm/devel/src/icosa_init.f90 (modified) * codes/icosagcm/devel/src/unstructured/caldyn_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/timestep_unstructured.F90 (modified) devel/unstructured : bubble test case with Fortran time stepping Mon, 18 Dec 2017 11:48:10 GMT dubos [641] * codes/icosagcm/devel/Python/test/fig_RSW2_MPAS_W02 (added) * codes/icosagcm/devel/Python/test/py/RSW2_MPAS_W02.py (added) * codes/icosagcm/devel/make_python (modified) devel/unstructured : test Python interface to ARK time scheme Mon, 18 Dec 2017 11:43:01 GMT dubos [640] * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) devel/unstructured : Python interface to ARK time scheme Mon, 18 Dec 2017 11:41:52 GMT dubos [639] * codes/icosagcm/devel/Python/dynamico/meshes.py (modified) * codes/icosagcm/devel/Python/src/functions.h (modified) devel/unstructured : Python interface to ARK time scheme Mon, 18 Dec 2017 11:33:31 GMT dubos [638] * codes/icosagcm/devel/src/unstructured/caldyn_unstructured.F90 (modified) * codes/icosagcm/devel/src/unstructured/data_unstructured.F90 (added) * codes/icosagcm/devel/src/unstructured/timestep_unstructured.F90 (added) devel/unstructured : code reorganization Tue, 12 Dec 2017 21:55:18 GMT dubos [637] * codes/icosagcm/devel/build (modified) * codes/icosagcm/devel/make_icosa (modified) devel : fix PATH in make_icosa / build Tue, 12 Dec 2017 21:45:46 GMT dubos [636] * codes/icosagcm/devel/Python/dynamico/meshes.py (modified) devel/Python : fix computation of hybrid coefs for periodic-box domain Tue, 12 Dec 2017 21:44:52 GMT dubos [635] * codes/icosagcm/devel/src/unstructured/caldyn_unstructured.F90 (modified) devel : set nb_threads to OMP_NUM_THREADS by default Tue, 12 Dec 2017 21:43:44 GMT dubos [634] * codes/icosagcm/devel/arch/arch-X64_OSX.fcm (modified) devel : fix arch for OSX+OpenMP Tue, 12 Dec 2017 21:42:38 GMT dubos [633] * codes/icosagcm/devel/Python/test/fig_NH_3D_DCMIP31 (added) * codes/icosagcm/devel/Python/test/fig_NH_3D_bubble (added) devel/Python : add 3D test cases Tue, 12 Dec 2017 21:42:06 GMT dubos [632] * codes/icosagcm/devel/Python/test/py/NH_3D_DCMIP31.py (added) * codes/icosagcm/devel/Python/test/py/NH_3D_bubble.py (added) * codes/icosagcm/devel/Python/test/py/RSW_2D.py (modified) * codes/icosagcm/devel/Python/test/py/RSW_MPAS_W02.py (modified) devel/Python : cosmetic changes to test cases Tue, 12 Dec 2017 15:04:23 GMT dubos [631] * codes/icosagcm/devel/Python/dynamico/meshes.py (added) * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) * codes/icosagcm/devel/Python/test/py/RSW_2D.py (modified) * codes/icosagcm/devel/Python/test/py/RSW_MPAS_W02.py (modified) * codes/icosagcm/devel/Python/test/py/bubble.py (modified) * codes/icosagcm/devel/Python/test/py/slice_GW_NH.py (modified) * codes/icosagcm/devel/Python/test/py/slice_GW_hydro.py (modified) * codes/icosagcm/devel/Python/test/py/test_xios.py (modified) * codes/icosagcm/devel/make_python (modified) devel/Python : extract pure Python stuff from cython module ... Tue, 12 Dec 2017 15:03:39 GMT dubos [630] * codes/icosagcm/devel/Python/src/functions.h (modified) * codes/icosagcm/devel/Python/src/xios.pyx (modified) devel/Python : more cythonic interface to XIOS Mon, 11 Dec 2017 13:39:35 GMT dubos [628] * codes/icosagcm/devel/src/base/earth_const.f90 (modified) * codes/icosagcm/devel/src/dynamics/caldyn_gcm.F90 (modified) * codes/icosagcm/devel/src/dynamics/caldyn_kernels_base.F90 (modified) devel : new "conservative" variant for vertical transport of momentum Mon, 11 Dec 2017 13:01:07 GMT dubos [627] * codes/icosagcm/devel/src/dynamics/caldyn_kernels_base.F90 (modified) devel : bugfix after 624 Fri, 08 Dec 2017 14:11:38 GMT dubos [626] * codes/icosagcm/devel/Python/codegen (modified) * codes/icosagcm/devel/Python/src/setup.py (modified) * codes/icosagcm/devel/make_python (modified) devel : some improvements to build Python part Fri, 08 Dec 2017 14:10:22 GMT dubos [625] * codes/icosagcm/devel/Python/src/kernels_caldyn_hevi.jin (modified) devel : introduced kernels for caldyn_vert (optional) Fri, 08 Dec 2017 14:08:49 GMT dubos [624] * codes/icosagcm/devel/src/base/earth_const.f90 (modified) * codes/icosagcm/devel/src/dynamics/caldyn_gcm.F90 (modified) * codes/icosagcm/devel/src/dynamics/caldyn_kernels_base.F90 (modified) * codes/icosagcm/devel/src/kernels_hex/caldyn_vert.k90 (added) * codes/icosagcm/devel/src/kernels_hex/caldyn_wflux.k90 (added) * codes/icosagcm/devel/src/kernels_unst/caldyn_dmass.k90 (added) * codes/icosagcm/devel/src/kernels_unst/caldyn_vert.k90 (modified) * codes/icosagcm/devel/src/kernels_unst/caldyn_wflux.k90 (added) * codes/icosagcm/devel/src/unstructured/caldyn_unstructured.F90 (modified) devel : introduced kernels for caldyn_vert (optional) Fri, 08 Dec 2017 11:50:02 GMT dubos [623] * codes/icosagcm/devel/Python/env/X64_OSX.env (moved) * codes/icosagcm/devel/arch/arch-X64_OSX.env (added) * codes/icosagcm/devel/arch/arch-X64_OSX.fcm (modified) * codes/icosagcm/devel/arch/arch-X64_OSX.path (modified) devel : refresh arch files for OSX Sat, 25 Nov 2017 21:31:31 GMT dubos [622] * codes/icosagcm/devel (modified) * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) * codes/icosagcm/devel/Python/test (modified) * codes/icosagcm/devel/Python/test/py/test_xios.py (added) * codes/icosagcm/devel/Python/test/xml (added) * codes/icosagcm/devel/Python/test/xml/context_icosa.xml (added) * codes/icosagcm/devel/Python/test/xml/context_icosa_simple.xml (added) * codes/icosagcm/devel/Python/test/xml/field_def_full.xml (added) * codes/icosagcm/devel/Python/test/xml/field_def_simple.xml (added) * codes/icosagcm/devel/Python/test/xml/filedef_dcmip2016.xml (added) * codes/icosagcm/devel/Python/test/xml/filedef_simple.xml (added) * codes/icosagcm/devel/Python/test/xml/iodef.xml (added) devel/unstructured : XIOS interface + test Sat, 25 Nov 2017 16:23:07 GMT dubos [621] * codes/icosagcm/devel/make_python (modified) devel/unstructured : mesh partitioning Sat, 25 Nov 2017 16:22:38 GMT dubos [620] * codes/icosagcm/devel/Python/env/X64_CURIE.env (modified) * codes/icosagcm/devel/Python/env/linux.env (modified) * codes/icosagcm/devel/Python/src/partition.c (added) * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) * codes/icosagcm/devel/Python/test/fig_partition (added) * codes/icosagcm/devel/Python/test/py/partition.py (added) devel/unstructured : mesh partitioning Sat, 25 Nov 2017 16:13:40 GMT dubos [619] * codes/icosagcm/devel/arch/arch-X64_CURIE.env (modified) * codes/icosagcm/devel/arch/arch-X64_CURIE.path (modified) devel : Curie arch files Sat, 25 Nov 2017 00:28:45 GMT dubos [618] * codes/icosagcm/devel/Python/dynamico/__init__.py (modified) * codes/icosagcm/devel/Python/env/X64_CURIE.env (modified) * codes/icosagcm/devel/Python/env/linux.env (modified) * codes/icosagcm/devel/Python/src (modified) * codes/icosagcm/devel/Python/src/functions.h (modified) * codes/icosagcm/devel/Python/src/hexagonal (modified) * codes/icosagcm/devel/Python/src/unstructured (modified) * codes/icosagcm/devel/Python/src/unstructured.pyx (modified) devel : get unstructured/slice test cases to work Sat, 25 Nov 2017 00:25:23 GMT dubos [617] * codes/icosagcm/devel/Python/test (added) * codes/icosagcm/devel/Python/test/clean.sh (added) * codes/icosagcm/devel/Python/test/fig_RSW_2D (added) * codes/icosagcm/devel/Python/test/fig_RSW_MPAS_W02 (added) * codes/icosagcm/devel/Python/test/fig_bubble (added) * codes/icosagcm/devel/Python/test/fig_slice_GW_hydro (added) * codes/icosagcm/devel/Python/test/fig_slice_orographic (added) * codes/icosagcm/devel/Python/test/get_MPAS_grids.sh (added) * codes/icosagcm/devel/Python/test/grids (added) * codes/icosagcm/devel/Python/test/py (added) * codes/icosagcm/devel/Python/test/py/RSW_2D.py (added) * codes/icosagcm/devel/Python/test/py/RSW_MPAS_W02.py (added) * codes/icosagcm/devel/Python/test/py/bubble.py (added) * codes/icosagcm/devel/Python/test/py/slice_GW_NH.py (added) * codes/icosagcm/devel/Python/test/py/slice_GW_hydro.py (added) * codes/icosagcm/devel/Python/test/py/slice_orographic.py (added) * codes/icosagcm/devel/Python/test/python.sh (added) devel : tests for unstructured-mesh prototype Wed, 22 Nov 2017 00:54:47 GMT dubos [616] * codes/icosagcm/devel/Python/src/hexagonal (modified) * codes/icosagcm/devel/Python/src/unstructured (modified) * codes/icosagcm/devel/arch/arch-X64_CURIE.fcm (modified) * codes/icosagcm/devel/make_python (modified) devel/unstructured : add -fPIC, minor improvements Wed, 22 Nov 2017 00:31:20 GMT dubos [615] * codes/icosagcm/devel/Python (added) * codes/icosagcm/devel/Python/codegen (added) * codes/icosagcm/devel/Python/dynamico (added) * codes/icosagcm/devel/Python/dynamico/DCMIP.py (added) * codes/icosagcm/devel/Python/dynamico/__init__.py (added) * codes/icosagcm/devel/Python/dynamico/advect.py (added) * codes/icosagcm/devel/Python/dynamico/dyn.py (added) * codes/icosagcm/devel/Python/dynamico/kessler.py (added) * codes/icosagcm/devel/Python/dynamico/parallel.py (added) * codes/icosagcm/devel/Python/dynamico/time_step.py (added) * codes/icosagcm/devel/Python/dynamico/wrap.py (added) * codes/icosagcm/devel/Python/env (added) * codes/icosagcm/devel/Python/env/CICLAD.env (added) * codes/icosagcm/devel/Python/env/OSX.env (added) * codes/icosagcm/devel/Python/env/X64_CURIE.env (added) * codes/icosagcm/devel/Python/env/linux.env (added) * codes/icosagcm/devel/Python/jinja (added) * codes/icosagcm/devel/Python/src (added) * codes/icosagcm/devel/Python/src/functions.h (added) * codes/icosagcm/devel/Python/src/hexagonal (added) * codes/icosagcm/devel/Python/src/hexagonal/macros.jin (added) * codes/icosagcm/devel/Python/src/kernels_caldyn_NH.jin (added) * codes/icosagcm/devel/Python/src/kernels_caldyn_hevi.jin (added) * codes/icosagcm/devel/Python/src/kernels_caldyn_hydro.jin (added) * codes/icosagcm/devel/Python/src/kernels_transport.jin (added) * codes/icosagcm/devel/Python/src/macros.jin (added) * codes/icosagcm/devel/Python/src/setup.py (added) * codes/icosagcm/devel/Python/src/unstructured (added) * codes/icosagcm/devel/Python/src/unstructured.pyx (added) * codes/icosagcm/devel/Python/src/unstructured/macros.jin (added) * codes/icosagcm/devel/Python/src/xios.pyx (added) * codes/icosagcm/devel/arch/arch-X64_CURIE.env (modified) * codes/icosagcm/devel/arch/arch-X64_CURIE.fcm (modified) * codes/icosagcm/devel/arch/arch-X64_CURIE.path (modified) * codes/icosagcm/devel/bld.cfg (modified) * codes/icosagcm/devel/make_python (added) * codes/icosagcm/devel/src/unstructured (added) * codes/icosagcm/devel/src/unstructured/caldyn_unstructured.F90 (added) devel/unstructured : import Python layer from HEAT Tue, 21 Nov 2017 23:46:46 GMT dubos [614] * codes/icosagcm/devel/src/kernels_unst (added) * codes/icosagcm/devel/src/kernels_unst/caldyn_fast.k90 (added) * codes/icosagcm/devel/src/kernels_unst/caldyn_slow_NH.k90 (added) * codes/icosagcm/devel/src/kernels_unst/caldyn_slow_hydro.k90 (added) * codes/icosagcm/devel/src/kernels_unst/caldyn_solver.k90 (added) * codes/icosagcm/devel/src/kernels_unst/caldyn_vert.k90 (added) * codes/icosagcm/devel/src/kernels_unst/caldyn_vert_NH.k90 (added) * codes/icosagcm/devel/src/kernels_unst/compute_NH_geopot.k90 (added) * codes/icosagcm/devel/src/kernels_unst/compute_geopot.k90 (added) * codes/icosagcm/devel/src/kernels_unst/coriolis.k90 (added) * codes/icosagcm/devel/src/kernels_unst/div.k90 (added) * codes/icosagcm/devel/src/kernels_unst/gradient.k90 (added) * codes/icosagcm/devel/src/kernels_unst/pvort_only.k90 (added) * codes/icosagcm/devel/src/kernels_unst/theta.k90 (added) devel : added unstructured-mesh kernels Tue, 21 Nov 2017 23:12:54 GMT dubos [613] * codes/icosagcm/devel/bld.cfg (modified) * codes/icosagcm/devel/src/kernels_hex (moved) devel : rename directory kernels as kernels_hex Tue, 21 Nov 2017 23:06:57 GMT dubos [612] * codes/icosagcm/devel/src/diagnostics/diagflux.F90 (modified) * codes/icosagcm/devel/src/diagnostics/wind.F90 (modified) * codes/icosagcm/devel/src/dynamics/caldyn_kernels_base.F90 (modified) * codes/icosagcm/devel/src/dynamics/caldyn_kernels_hevi.F90 (modified) * codes/icosagcm/devel/src/transport/advect.F90 (modified) devel : rename directory kernels as kernels_hex Tue, 21 Nov 2017 23:03:35 GMT dubos [611] * codes/icosagcm/devel/arch/arch-X64_CURIE.fcm (modified) * codes/icosagcm/devel/arch/arch-ifort_CICLAD.env (added) * codes/icosagcm/devel/arch/arch-ifort_CICLAD.fcm (added) * codes/icosagcm/devel/arch/arch-ifort_CICLAD.path (added) devel : update arch files from trunk Tue, 21 Nov 2017 14:09:25 GMT dubos [609] * codes/icosagcm/devel/src/diagnostics/check_conserve.f90 (modified) * codes/icosagcm/devel/src/initial/etat0_heldsz.f90 (modified) * codes/icosagcm/devel/src/time/timeloop_gcm.f90 (modified) * codes/icosagcm/devel/src/vertical/disvert.f90 (modified) * codes/icosagcm/devel/src/vertical/disvert_strato.f90 (modified) devel : backported commits 606 and 607 from trunk Tue, 21 Nov 2017 14:03:47 GMT dubos [608] * codes/icosagcm/devel/src/kernels/energetics.k90 (deleted) devel : removed unused kernel Sat, 18 Nov 2017 23:18:39 GMT dubos [607] * codes/icosagcm/trunk/src/diagnostics/check_conserve.f90 (modified) * codes/icosagcm/trunk/src/initial/etat0_heldsz.f90 (modified) * codes/icosagcm/trunk/src/time/timeloop_gcm.f90 (modified) trunk : added AAM_tot to detailed AAM budget Wed, 25 Oct 2017 15:00:32 GMT dubos [606] * codes/icosagcm/trunk/src/vertical/disvert.f90 (modified) * codes/icosagcm/trunk/src/vertical/disvert_strato.f90 (modified) trunk : new disvert strato_custom Mon, 23 Oct 2017 23:46:15 GMT dubos [605] * codes/icosagcm/trunk/src/diagnostics/observable.f90 (modified) trunk : backported r600 from devel Mon, 23 Oct 2017 23:32:57 GMT dubos [604] * codes/icosagcm/trunk/src/diagnostics/diagflux.F90 (modified) * codes/icosagcm/trunk/src/diagnostics/observable.f90 (modified) * codes/icosagcm/trunk/src/dynamics/caldyn_kernels_base.F90 (modified) * codes/icosagcm/trunk/src/dynamics/caldyn_kernels_hevi.F90 (modified) * codes/icosagcm/trunk/src/kernels/energy_fluxes.k90 (modified) * codes/icosagcm/trunk/src/parallel/omp_para.F90 (modified) * codes/icosagcm/trunk/src/parallel/transfert_mpi.f90 (modified) * codes/icosagcm/trunk/src/sphere/geometry.f90 (modified) * codes/icosagcm/trunk/src/time/timeloop_gcm.f90 (modified) trunk : backported r600-603 from devel Mon, 23 Oct 2017 23:22:08 GMT dubos [603] * codes/icosagcm/devel/src/diagnostics/diagflux.F90 (modified) * codes/icosagcm/devel/src/diagnostics/observable.f90 (modified) * codes/icosagcm/devel/src/dynamics/caldyn_kernels_base.F90 (modified) * codes/icosagcm/devel/src/dynamics/caldyn_kernels_hevi.F90 (modified) * codes/icosagcm/devel/src/parallel/omp_para.F90 (modified) * codes/icosagcm/devel/src/parallel/transfert_mpi.f90 (modified) devel : output theta and momentum fluxes Mon, 23 Oct 2017 23:20:12 GMT dubos [602] * codes/icosagcm/devel/src/sphere/geometry.f90 (modified) devel : make sure le_de is 0 for 6th edge of pentagons Mon, 23 Oct 2017 16:25:46 GMT dubos [601] * codes/icosagcm/devel/src/diagnostics/diagflux.F90 (modified) * codes/icosagcm/devel/src/kernels/energy_fluxes.k90 (modified) * codes/icosagcm/devel/src/kernels/gradient.k90 (deleted) * codes/icosagcm/devel/src/time/timeloop_gcm.f90 (modified) devel : compute horizontal fluxes of ulon and theta Mon, 23 Oct 2017 16:21:27 GMT dubos [600] * codes/icosagcm/devel/src/diagnostics/observable.f90 (modified) devel : remove unused buffers in diagnostics/observable.f90 Thu, 19 Oct 2017 15:04:26 GMT dubos [599] * codes/icosagcm/trunk/src/diagnostics/check_conserve.f90 (modified) * codes/icosagcm/trunk/src/diagnostics/diagflux.F90 (added) * codes/icosagcm/trunk/src/diagnostics/observable.f90 (modified) * codes/icosagcm/trunk/src/diagnostics/wind.F90 (moved) * codes/icosagcm/trunk/src/dynamics/caldyn_gcm.F90 (modified) * codes/icosagcm/trunk/src/icosa_init.f90 (modified) * codes/icosagcm/trunk/src/kernels/advect_horiz.k90 (added) * codes/icosagcm/trunk/src/kernels/energy_fluxes.k90 (added) * codes/icosagcm/trunk/src/kernels/flux_centered.k90 (added) * codes/icosagcm/trunk/src/kernels/gradient.k90 (deleted) * codes/icosagcm/trunk/src/kernels/wind_centered.k90 (added) * codes/icosagcm/trunk/src/physics/physics.f90 (modified) * codes/icosagcm/trunk/src/physics/physics_lmdz_generic.F90 (modified) * codes/icosagcm/trunk/src/time/timeloop_gcm.f90 (modified) * codes/icosagcm/trunk/src/transport/advect.F90 (moved) * codes/icosagcm/trunk/src/transport/advect_tracer.f90 (modified) trunk : backported commits r582-r598 (transport diagnostics) Thu, 19 Oct 2017 14:56:56 GMT dubos [598] * codes/icosagcm/devel/src/diagnostics/observable.f90 (modified) devel : minor cleanup in observable.f90 Thu, 19 Oct 2017 08:32:52 GMT dubos [595] * codes/icosagcm/devel/src/diagnostics/diagflux.F90 (modified) * codes/icosagcm/devel/src/diagnostics/observable.f90 (modified) * codes/icosagcm/devel/src/time/timeloop_gcm.f90 (modified) devel : fix halo issues with computation of energy fluxes Wed, 18 Oct 2017 16:46:11 GMT dubos [594] * codes/icosagcm/devel/src/diagnostics/diagflux.F90 (modified) * codes/icosagcm/devel/src/diagnostics/observable.f90 (modified) * codes/icosagcm/devel/src/kernels/energy_fluxes.k90 (added) * codes/icosagcm/devel/src/time/timeloop_gcm.f90 (modified) * codes/icosagcm/devel/src/transport/advect.F90 (modified) devel : diagnose energy fluxes Tue, 17 Oct 2017 22:42:50 GMT dubos [593] * codes/icosagcm/devel/src/diagnostics/diagflux.F90 (moved) * codes/icosagcm/devel/src/kernels/energetics.k90 (added) devel : fields for energy fluxes (diagflux) Tue, 17 Oct 2017 21:11:14 GMT dubos [592] * codes/icosagcm/devel/src/diagnostics/diagflux.f90 (modified) * codes/icosagcm/devel/src/diagnostics/observable.f90 (modified) * codes/icosagcm/devel/src/time/timeloop_gcm.f90 (modified) * codes/icosagcm/devel/src/transport/advect_tracer.f90 (modified) devel : finalize diagnostics of tracer fluxes Mon, 16 Oct 2017 18:45:02 GMT dubos [590] * codes/icosagcm/devel/src/diagnostics/diagflux.f90 (modified) * codes/icosagcm/devel/src/transport/advect.F90 (modified) devel : fix previous commit Mon, 16 Oct 2017 13:23:49 GMT dubos [588] * codes/icosagcm/devel/src/diagnostics/observable.f90 (modified) devel : output time- averaged tracer fluxes Mon, 16 Oct 2017 13:22:59 GMT dubos [587] * codes/icosagcm/devel/src/diagnostics/diagflux.f90 (modified) * codes/icosagcm/devel/src/diagnostics/wind.F90 (modified) * codes/icosagcm/devel/src/kernels/flux_centered.k90 (modified) * codes/icosagcm/devel/src/kernels/wind_centered.k90 (modified) devel : multiplicative factor in flux/wind reconstructions Mon, 16 Oct 2017 13:16:00 GMT dubos [586] * codes/icosagcm/devel/src/dynamics/caldyn_gcm.F90 (modified) devel : cleanup caldyn_gcm.F90