1 | #!/bin/bash |
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2 | |
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3 | # LHS experiment number (corresponds to the line number in the matrix of experiments) |
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4 | #runnum="100" # should be a 3 digit number. |
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5 | runnum="XIXIXIXIXIX" |
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6 | |
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7 | # name of the run: |
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8 | namerun="AN40T"$runnum |
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9 | |
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10 | tmodelend="100000." |
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11 | tmodelbegin="0." |
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12 | tmodellength="100000." |
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13 | |
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14 | |
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15 | parallel="no" # "yes or no?" |
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16 | proc_number="4" # number of processor used |
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17 | ppn_number=$proc_number # number of cpus (ppn) |
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18 | exename="Ant-40" |
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19 | |
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20 | queue="long" # specify queue used : short, medium, long, xlong... |
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21 | |
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22 | # Files used |
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23 | grisli_run_file="Master-files/grisli.run.lsce" |
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24 | param_file="Master-files/Param/anteis1_param_list_lhs-nolin.dat" # param file |
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25 | TEMPS_NETCDF_file="Master-files/Param/lhs_TEMPS-NETCDF.dat" # TEMPS-NETCDF.dat |
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26 | module_choix_file="Master-files/module_choix-antar40-0.4-nolin.f90" # module choix |
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27 | |
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28 | #Revision number : |
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29 | rev=`svn info | grep "vision" | awk '{print $2}'` |
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30 | echo "Code revision svn "$rev |
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31 | |
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32 | |
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33 | echo "-------------------------------------" |
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34 | echo " Now launching run: " $namerun |
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35 | echo " ------------------------- " |
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36 | |
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37 | #-------------------------------------------------- |
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38 | # Check if times are ok: |
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39 | #-------------------------------------------------- |
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40 | |
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41 | tcheck=`echo "$tmodelbegin + $tmodellength" | bc -l` |
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42 | tcheckbis=`echo "$tmodelend + 0" | bc -l` |
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43 | if [ $tcheck != $tcheckbis ]; then |
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44 | echo "The times provided are wrong!" |
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45 | echo $tcheck $tcheckbis |
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46 | echo "Tbegin:" $tmodelbegin ", Tend:" $tmodelend ", length:" $tmodellength |
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47 | exit 0 |
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48 | else |
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49 | echo "The times provided are correct." |
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50 | fi |
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51 | |
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52 | #-------------------------------------------------- |
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53 | # The different directories: |
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54 | #-------------------------------------------------- |
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55 | |
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56 | LAUNCHING_DIR=`pwd` |
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57 | GRISLI_DIR=${LAUNCHING_DIR%%/launching_area} |
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58 | RUNDIR=${GRISLI_DIR}"/RUNS/"${namerun} |
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59 | MODELMASTER=${GRISLI_DIR}"/SOURCES" |
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60 | MODEL=${RUNDIR}"/SOURCES" |
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61 | |
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62 | |
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63 | if [ -d $RUNDIR ]; then |
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64 | echo "This run exists, do you really want to overwrite?" |
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65 | echo "You have 3 sec. to do a ctr+c..." |
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66 | sleep 3 |
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67 | echo "Ok, your choice." |
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68 | else |
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69 | mkdir $RUNDIR |
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70 | echo " Run will be in:" |
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71 | echo " " $RUNDIR |
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72 | fi |
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73 | |
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74 | if [ -d $MODEL ]; then |
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75 | echo "model dir already created, cleaning up before copying files" |
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76 | rm -rf $MODEL"/"* |
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77 | else |
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78 | mkdir $MODEL |
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79 | fi |
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80 | |
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81 | cp -R $MODELMASTER"/"* $MODEL"/." |
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82 | svn status $MODELMASTER > $MODEL"/svn.status.txt" |
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83 | svn diff $MODELMASTER > $MODEL"/svn.diff.txt" |
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84 | |
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85 | |
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86 | if [ -d $RUNDIR"/bin" ]; then |
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87 | echo "exe in bin/" |
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88 | else |
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89 | mkdir $RUNDIR"/bin" |
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90 | fi |
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91 | |
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92 | if [ -d $RUNDIR"/RESULTATS" ]; then |
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93 | echo "exe in RESULTATS/" |
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94 | else |
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95 | mkdir $RUNDIR"/RESULTATS" |
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96 | fi |
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97 | |
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98 | if [ -d $RUNDIR"/INPUT" ]; then |
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99 | echo "inputs are linked to model master" |
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100 | else |
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101 | echo "inputs will be linked to model master" |
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102 | mkdir $RUNDIR"/INPUT" |
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103 | fi |
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104 | |
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105 | |
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106 | |
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107 | echo "Now copying master files to the working directory:" |
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108 | echo $RUNDIR |
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109 | echo "And to the model directory:" |
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110 | echo $MODEL |
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111 | |
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112 | |
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113 | cp $TEMPS_NETCDF_file $MODEL"/Fichiers-parametres/TEMPS-NETCDF.dat" |
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114 | cp $module_choix_file $MODEL"/Ant40_files/module_choix-antar40-0.4.f90" |
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115 | cp $param_file $RUNDIR"/bin/anteis1_param_list.dat" |
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116 | cp $grisli_run_file $RUNDIR"/bin/grisli.run" |
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117 | |
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118 | |
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119 | cd $RUNDIR"/INPUT" |
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120 | ln -sf $MODELMASTER"/../INPUT/ANTEIS1" . |
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121 | ln -sf $MODELMASTER"/../INPUT/Forcage" . |
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122 | ln -sf $MODELMASTER"/../INPUT/tracer.dat" . |
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123 | |
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124 | |
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125 | #-------------------------------------------------- |
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126 | # parameter values: |
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127 | #-------------------------------------------------- |
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128 | |
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129 | mnolin_fact="3." |
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130 | nbiternolin_fact="5" |
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131 | |
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132 | fichlhs=$LAUNCHING_DIR"/Master-files/LHS/LHS_values_4-params.dat" |
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133 | expnum=`echo $runnum "* 1." | bc` |
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134 | echo "LHS exp. number: " $expnum |
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135 | head -$expnum $fichlhs | tail -1 > prov |
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136 | # Keep a record of the values: |
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137 | cp prov $RUNDIR"/bin/LHS_values_4-params_run-"$expnum".dat" |
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138 | |
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139 | enh_fact=`awk '{print $2}' prov` |
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140 | bslope_fact=`awk '{print $3*100}' prov` |
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141 | ob_fact=`awk '{print (((($3*1000-2.75))/2.25)*0.5)+1.}' prov` # pour le Ob du beta de PISM (simple hydro) (ici entre 0.5 et 1.5) |
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142 | kond0_fact=`awk '{print $4}' prov` |
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143 | kt_fact=`awk '{print $5*25}' prov` |
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144 | |
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145 | bexpo_fact="1." |
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146 | |
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147 | infiltr_fact="1.e-3" #"1.e-3" |
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148 | |
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149 | |
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150 | |
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151 | #-------------------------------------------------- |
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152 | # Replacing key words: |
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153 | #-------------------------------------------------- |
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154 | |
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155 | # run spec.: |
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156 | sed -i "s/RUNNAME/$namerun/" $RUNDIR"/bin/anteis1_param_list.dat" |
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157 | sed -i "s/RUNTBEGIN/$tmodelbegin/" $RUNDIR"/bin/anteis1_param_list.dat" |
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158 | sed -i "s/RUNTEND/$tmodelend/" $RUNDIR"/bin/anteis1_param_list.dat" |
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159 | |
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160 | # submission script: |
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161 | sed -i "s|SOURCESREP|$MODEL|" $RUNDIR"/bin/grisli.run" |
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162 | sed -i "s|EXEREP|$RUNDIR\/bin|" $RUNDIR"/bin/grisli.run" |
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163 | sed -i "s/RUNNAME/$namerun/" $RUNDIR"/bin/grisli.run" |
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164 | sed -i "s/EXE_NAME/$exename/g" $RUNDIR"/bin/grisli.run" |
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165 | |
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166 | if [ $parallel = "yes" ]; then |
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167 | sed -i "s/QUEUE/${queue}p/" $RUNDIR"/bin/grisli.run" |
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168 | sed -i "s/PROC_NUMBER/$proc_number/" $RUNDIR"/bin/grisli.run" |
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169 | sed -i "s/PPN_NUMBER/$ppn_number/" $RUNDIR"/bin/grisli.run" |
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170 | else |
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171 | sed -i "s/QUEUE/$queue/" $RUNDIR"/bin/grisli.run" |
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172 | sed -i "s/PROC_NUMBER/1/" $RUNDIR"/bin/grisli.run" |
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173 | sed -i "s/PPN_NUMBER/1/" $RUNDIR"/bin/grisli.run" |
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174 | sed -i "/export\ MKL_NUM_THREADS/d" $RUNDIR"/bin/grisli.run" |
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175 | sed -i "/export\ OMP_NUM_THREADS/d" $RUNDIR"/bin/grisli.run" |
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176 | sed -i "/export\ KMP_STACKSIZE/d" $RUNDIR"/bin/grisli.run" |
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177 | fi |
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178 | |
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179 | # param values: |
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180 | sed -i "s/PARAMMNOLIN/$mnolin_fact/" $RUNDIR"/bin/anteis1_param_list.dat" |
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181 | sed -i "s/PARAMNBITERNOLIN/$nbiternolin_fact/" $RUNDIR"/bin/anteis1_param_list.dat" |
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182 | sed -i "s/PARAMENHFACT/$enh_fact/" $RUNDIR"/bin/anteis1_param_list.dat" |
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183 | sed -i "s/PARAMINFILTR/$infiltr_fact/" $RUNDIR"/bin/anteis1_param_list.dat" |
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184 | sed -i "s/PARAMKOND0/$kond0_fact/" $RUNDIR"/bin/anteis1_param_list.dat" |
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185 | sed -i "s/PARAMBSLOPE/$bslope_fact/" $RUNDIR"/bin/anteis1_param_list.dat" |
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186 | sed -i "s/PARAMBEXPO/$bexpo_fact/" $RUNDIR"/bin/anteis1_param_list.dat" |
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187 | sed -i "s/PARAMOB/$ob_fact/" $RUNDIR"/bin/anteis1_param_list.dat" |
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188 | sed -i "s/PARAMKT/$kt_fact/" $RUNDIR"/bin/anteis1_param_list.dat" |
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189 | |
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190 | #-------------------------------------------------- |
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191 | # Submitting the job: |
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192 | #-------------------------------------------------- |
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193 | cd $RUNDIR"/bin" |
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194 | echo "submitting the job" |
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195 | qsub grisli.run |
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196 | echo "-------------------------------------" |
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197 | |
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198 | |
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199 | |
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200 | |
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201 | |
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202 | |
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203 | |
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204 | |
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