1 | slurmstepd-irene1019: error: task/cgroup: task[0] unable to set taskset '0x0' |
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2 | + SCRIPT_PID=21591 |
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3 | + set +x |
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4 | + /bin/ksh -x /tmp/jobstart.21497 |
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5 | Mon May 27 18:57:44 CEST 2019 |
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6 | |
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7 | ==================================================== |
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8 | Where do we run ? irene1019 |
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9 | Linux irene1019 3.10.0-957.5.1.el7.x86_64 #1 SMP Wed Dec 19 10:46:58 EST 2018 x86_64 x86_64 x86_64 GNU/Linux |
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10 | ==================================================== |
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11 | |
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12 | Source machine dependent settings for irene Intel X-64 at TGCC |
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13 | 2019-05-27 18:57:46 --Debug1--> List of loaded modules: |
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14 | Currently Loaded Modulefiles: |
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15 | 1) ccc/1.0(default) 24) nco/4.6.0(default) |
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16 | 2) datadir/gen7403 25) cdo/1.7.2rc6(default) |
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17 | 3) dfldatadir/gen7403 26) ghostscript/9.19(default) |
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18 | 4) flavor/buildcompiler/intel/17(default) 27) ferret/7.2(default) |
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19 | 5) feature/mkl/lp64 |
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20 | 6) feature/mkl/sequential |
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21 | 7) mkl/17.0.6.256(default) |
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22 | 8) licsrv/intel |
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23 | 9) c/intel/17.0.6.256(default) |
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24 | 10) c++/intel/17.0.6.256(default) |
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25 | 11) fortran/intel/17.0.6.256(default) |
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26 | 12) intel/17.0.6.256(default) |
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27 | 13) flavor/buildmpi/openmpi/2.0 |
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28 | 14) feature/openmpi/mpi_compiler/intel(default) |
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29 | 15) hwloc/1.11.3(default) |
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30 | 16) feature/openmpi/net/auto(default) |
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31 | 17) .tuning/openmpi/2.0.4 |
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32 | 18) mpi/openmpi/2.0.4(default) |
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33 | 19) flavor/hdf5/parallel |
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34 | 20) netcdf-c/4.6.0(default) |
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35 | 21) netcdf-fortran/4.4.4(default) |
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36 | 22) hdf5/1.8.20(default) |
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37 | 23) feature/bridge/heterogenous_mpmd |
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38 | IGCM_sys_MkdirWork : /ccc/scratch/cont003/gen7403/p86ggas/RUN_DIR/1913357_21591 |
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39 | IGCM_sys_Cd : /ccc/scratch/cont003/gen7403/p86ggas/RUN_DIR/1913357_21591 |
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40 | |
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41 | 2019-05-27 18:57:47 --Debug1--> IGCM_config_CommonConfiguration |
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42 | 2019-05-27 18:57:47 --Debug1--> /ccc/cont003/home/gencmip6/p86ggas/PAMIP/26042019/modipsl/config/LMDZOR_v6/CM619-pamip-STD/config.card |
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43 | |
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44 | 2019-05-27 18:57:47 --Debug1--> DefineArrayFromOption : config_UserChoices |
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45 | 2019-05-27 18:57:47 --------------Debug3--> JobName : CM619-pamip-STD |
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46 | 2019-05-27 18:57:47 --------------Debug3--> ExperimentName : piClim-histall |
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47 | 2019-05-27 18:57:47 --------------Debug3--> SpaceName : PROD |
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48 | 2019-05-27 18:57:47 --------------Debug3--> TagName : LMDZOR |
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49 | 2019-05-27 18:57:47 --------------Debug3--> LongName : IPSLCM6.1.9-LR |
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50 | 2019-05-27 18:57:47 --------------Debug3--> ModelName : IPSL-CM6A-LR |
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51 | 2019-05-27 18:57:47 --------------Debug3--> Member : r1i1p1f1 |
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52 | 2019-05-27 18:57:47 --------------Debug3--> ExpType : LMDZOR/amip_CMIP6 |
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53 | 2019-05-27 18:57:47 --------------Debug3--> DataProject : gencmip6 |
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54 | 2019-05-27 18:57:47 --------------Debug3--> CalendarType : leap |
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55 | 2019-05-27 18:57:47 --------------Debug3--> DateBegin : 2000-03-01 |
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56 | 2019-05-27 18:57:47 --------------Debug3--> DateEnd : 2001-05-31 |
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57 | 2019-05-27 18:57:47 --------------Debug3--> PeriodLength : 5M |
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58 | |
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59 | 2019-05-27 18:57:47 --Debug1--> DefineArrayFromOption : config_Ensemble |
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60 | |
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61 | 2019-05-27 18:57:47 --Debug1--> Warning with readding of config_Ensemble variable in /ccc/cont003/home/gencmip6/p86ggas/PAMIP/26042019/modipsl/config/LMDZOR_v6/CM619-pamip-STD/config.card. |
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62 | 2019-05-27 18:57:47 --Debug1--> Warning: Section Ensemble not found |
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63 | |
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64 | 2019-05-27 18:57:47 --Debug1--> DefineArrayFromOption : config_Post |
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65 | 2019-05-27 18:57:47 --------------Debug3--> RebuildFrequency : NONE |
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66 | 2019-05-27 18:57:47 --------------Debug3--> PackFrequency : 15M |
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67 | 2019-05-27 18:57:47 --------------Debug3--> TimeSeriesFrequency : NONE |
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68 | 2019-05-27 18:57:47 --------------Debug3--> SeasonalFrequency : NONE |
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69 | 2019-05-27 18:57:47 --------------Debug3--> SeasonalFrequencyOffset : 0 |
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70 | 2019-05-27 18:57:47 --------------Debug3--> MetricsPCMDI : FALSE |
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71 | |
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72 | unload module dfldatadir/gen7403 (Data Directory) |
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73 | unload module datadir/gen7403 (Data Directory) |
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74 | load module datadir/gencmip6 (Data Directory) |
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75 | load module dfldatadir/gencmip6 (Data Directory) |
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76 | 2019-05-27 18:57:48 --Debug1--> Load dfldatadir for DataProject red in config.card : gencmip6 |
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77 | 2019-05-27 18:57:48 --Debug1--> R_OUT has been defined = /ccc/store/cont003/gencmip6/p86ggas/IGCM_OUT |
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78 | 2019-05-27 18:57:48 --Debug1--> R_BUF has been defined = /ccc/scratch/cont003/gencmip6/p86ggas/IGCM_OUT |
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79 | 2019-05-27 18:57:48 --Debug1--> R_FIG has been defined = /ccc/work/cont003/gencmip6/p86ggas/IGCM_OUT |
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80 | IGCM_sys_MkdirWork : /ccc/scratch/cont003/gencmip6/p86ggas/IGCM_OUT/LMDZOR/PROD/piClim-histall/CM619-pamip-STD/REBUILD |
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81 | IGCM_sys_TestDirArchive : /ccc/store/cont003/gencmip6/p86ggas/IGCM_OUT/LMDZOR/PROD/piClim-histall/CM619-pamip-STD |
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82 | CM619-pamip-STD 20000401 20010531 |
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83 | 2019-05-27 18:57:48 --Debug1--> Check coherence between PackFrequency and PeriodLength |
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84 | 2019-05-27 18:57:48 --------Debug2--> IGCM_post_CheckModuloFrequency : Master=14M Slave=5M |
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85 | 2019-05-27 18:57:48 --Debug1--> config_UserChoices_PeriodLength frequency 5M not compatbile with |
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86 | 2019-05-27 18:57:48 --Debug1--> PeriodPack frequency : 14M |
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87 | IGCM_debug_Exit : Check your frequency |
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88 | |
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89 | !!!!!!!!!!!!!!!!!!!!!!!!!! |
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90 | !! ERROR TRIGGERED !! |
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91 | !! EXIT FLAG SET !! |
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92 | !------------------------! |
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93 | |
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94 | IGCM_debug_Verif_Exit : Something wrong happened previously. |
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95 | IGCM_debug_Verif_Exit : ERROR and EXIT keyword will help find out where. |
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96 | EXIT THE POST-PROCESSING JOB. |
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97 | |
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98 | Mon May 27 18:57:48 CEST 2019 |
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99 | ########## ########## ########## ########## ########## ########## ########## ########## |
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100 | Execution Sum Up |
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101 | ########## ########## ########## ########## ########## ########## ########## ########## |
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102 | Jobid : 1913357 |
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103 | Jobname : PACKOUTPUT |
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104 | User : p86ggas |
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105 | Account : dcpcmip6@skylake |
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106 | Limits : time = 10:00:00 , memory/task = 3750 Mo |
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107 | Date : submit = 27/05/2019 18:57:23 , start = 27/05/2019 18:57:41 , end = 28/05/2019 04:57:44 |
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108 | Execution : partition = skylake , QoS = normal , Comment = (null) |
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109 | Resources : ntasks = 1 , cpus/task = 4 , ncpus = 4 , nodes = 1 |
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110 | Nodes=irene1019 CPU_IDs=0-1,5-6 Mem=15000 GRES_IDX= |
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111 | |
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112 | Memory / step |
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113 | -------------- |
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114 | Resident Size (Mo) Virtual Size (Go) |
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115 | JobID Max (Node:Task) AveTask Max (Node:Task) AveTask |
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116 | ----------- ------------------------ ------- -------------------------- ------- |
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117 | |
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118 | Accounting / step |
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119 | ------------------ |
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120 | |
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121 | JobID JobName Ntasks Ncpus Nnodes Layout Elapsed User System Eff State |
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122 | ------------ ------------ ------ ----- ------ ------- ------- ------- ------ --- ----- |
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123 | 1913357 PACKOUTPUT - 4 1 - 00:00:07 (100%) - - - - |
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124 | ########## ########## ########## ########## ########## ########## ########## ########## |
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