1 | #!/bin/bash |
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2 | #set -vx |
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3 | # Default options |
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4 | # |
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5 | # |
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6 | # |
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7 | date |
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8 | #### 1 Set up the compiling options |
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9 | #### Define some directories |
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10 | submitdir=$( pwd ) |
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11 | modipsl=$submitdir/../.. |
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12 | arch_path=$submitdir/ARCH |
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13 | mysrc_path=$submitdir/SOURCES |
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14 | |
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15 | #### Set default options |
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16 | # Atmospheric resolution, for LMDZ/ORCHIDEE in regular mode |
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17 | resol_atm=144x142x79 |
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18 | # Oceanic resolution, for NEMO (ORCA2/ORCA1/ORCA025) |
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19 | resol_oce=ORCA1 |
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20 | # Version of ice model lim2/lim3 |
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21 | icemodel=lim3 |
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22 | # Coupled with ocean biogeochemistry (y/n) |
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23 | oceanbio=y |
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24 | # Version ESM CO2: CO2 interactif ocean/atmosphere (y/n) |
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25 | esmco2=n |
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26 | # Version ESM AER : Aer interactif chemistry / atmosphere (y/n) |
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27 | esmaer=n |
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28 | # Also compile ce0l subprogram to LMDZ (y/n) |
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29 | ce0l=n |
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30 | # choose radiative code compilation option |
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31 | rad=rrtm |
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32 | opt_rad="" |
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33 | # choose inca chemistry |
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34 | optchimie=AER |
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35 | |
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36 | # Optimization mode |
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37 | # optmode=prod/dev/debug |
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38 | optmode=prod |
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39 | # fcm_arch |
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40 | fcm_arch=default |
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41 | # Default values to be overritten |
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42 | parallel=mpi_omp |
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43 | export fcm_arch parallel xios |
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44 | full_flag="" |
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45 | full_nemo=n |
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46 | full_inca="" |
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47 | full_xios="" |
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48 | full_lmdz="" |
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49 | full_orch="" |
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50 | |
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51 | |
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52 | |
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53 | # Output text file for compilation of each component |
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54 | datestr=`LC_ALL=C date +"%Y%m%dT%H%M"` |
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55 | outfile=$submitdir/out_compile_ipslcm6.$datestr |
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56 | echo > $outfile |
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57 | echo; echo "Text output from compilation will be stored in file out_compile_ipslcm6.$datestr"; echo |
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58 | |
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59 | #### Read arguments |
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60 | # Loop over all arguments to modify default set up |
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61 | while (($# > 0)) ; do |
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62 | case $1 in |
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63 | "-h") cat <<end_help |
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64 | ######################################################################## |
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65 | # Usage of the script compile_ipslcm6.sh |
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66 | # |
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67 | ######################################################################## |
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68 | |
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69 | ./compile_ipslcm6.sh [Options] |
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70 | |
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71 | |
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72 | Options: [LR / VLR / MR1 / MR025] Model resolution, choose only one. Default: LR. |
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73 | [ESMCO2] Compile IPSLCM6 for CO2 interactif ocean/atmosphere. |
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74 | [ESMCHEM] Compile IPSLCM6 for chemistry interactif on atmosphere |
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75 | [ESMCO2AER] Compile IPSLCM6 for both interactive CO2 and chemistry, and also with transfer of species from PISCES to INCA. |
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76 | [-full] Full recompilation of all components. This option can be added to all other options. |
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77 | [-cleannemo] Full recompilation of NEMO component only. |
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78 | [-debug / -dev / -prod] Level of optimization. One of these can be added to all other compile options. Default: -prod. |
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79 | |
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80 | |
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81 | Example 1: Default compilation of IPSLCM6 for resoltion LR |
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82 | (Resolution atmos: 144x142x79, ocean: ORCA1) |
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83 | ./compile_ipslcm6.sh |
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84 | |
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85 | Example 2: Compilation of IPSLCM6 for resolution MR025 |
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86 | (atmos: 256x256x79, ocean: ORCA025, NOPISCES) |
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87 | ./compile_ipslcm6.sh MR025 |
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88 | |
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89 | Example 3: Compilation of IPSLCM6 for ESM CO2 |
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90 | ./compile_ipslcm6.sh ESMCO2 -cleannemo |
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91 | |
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92 | Example 4: Default resoltuion (LR) compiled in debug mode |
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93 | ./compile_ipslcm6.sh -debug |
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94 | |
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95 | Example 5: Default compilation with full recompilation of all components. No clean is needed. |
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96 | ./compile_ipslcm6.sh -full |
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97 | |
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98 | Example 6: Full recompilation of resolution MR05 in debug mode |
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99 | ./compile_ipslcm6.sh MR025 -debug -full |
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100 | |
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101 | Example 7: choose radiative schema for LMDZ (oldrad/rrtm/ecrad). Default is rrtm |
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102 | ./compile_ipslcm6.sh MR025 -rad ecrad |
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103 | |
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104 | Example 8: Compilation of IPSLCM6 for ESM with INCA chemistry (default CHEMISTRY=AER) |
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105 | ./compile_ipslcm6.sh ESMCHEM |
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106 | |
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107 | Example 9: Compilation of IPSLCM6 for ESM with INCA chemistry and choose the chemistry |
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108 | ./compile_ipslcm6.sh ESMCHEM -chimie GES |
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109 | |
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110 | |
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111 | end_help |
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112 | exit;; |
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113 | "VLR") resol_atm=96x95x39; resol_oce=ORCA2 ; icemodel=lim2; oceanbio=y; shift ;; |
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114 | "LR") resol_atm=144x142x79; resol_oce=ORCA1 ; icemodel=lim3; oceanbio=y; shift ;; |
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115 | "MR1") resol_atm=256x256x79; resol_oce=ORCA1 ; icemodel=lim3; oceanbio=y; shift ;; |
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116 | "MR025") resol_atm=256x256x79; resol_oce=ORCA025 ; icemodel=lim3; oceanbio=n; shift ;; |
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117 | "ESMCO2") esmco2=y; shift ;; |
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118 | "ESMCHEM") esmchem=y; shift ;; |
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119 | "ESMCO2AER") esmco2=y; esmchem=y; shift ;; |
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120 | "CE0L") ce0l=y ; shift ;; |
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121 | "-rad") rad=$2; shift ; shift;; |
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122 | "-parallel") parallel=$2 ; shift ; shift ;; |
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123 | "-arch") fcm_arch="$2" ; shift ; shift ;; |
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124 | "-debug") optmode=debug ; shift ;; |
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125 | "-dev") optmode=dev ; shift ;; |
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126 | "-prod") optmode=prod ; shift ;; |
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127 | "-full") full_flag="-full"; full_nemo=y ; full_xios="--full" ; full_lmdz="-full" ; full_orch="-full" ; shift ;; |
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128 | "-full_xios") full_xios="--full" ; shift ;; # Note only full_xios is using double dash: --full |
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129 | "-full_lmdz") full_lmdz="-full" ; shift ;; |
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130 | "-full_orch") full_orch="-full" ; shift ;; |
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131 | "-full_nemo") full_nemo=y ; shift ;; |
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132 | "-full_inca") full_inca="-clean"; shift ;; |
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133 | "-cleannemo") full_nemo=y ; shift ;; |
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134 | "-chimie") optchimie=$2; shift ; shift;; |
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135 | |
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136 | *) echo "unknown option "$1" , exiting..." ; exit |
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137 | esac |
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138 | done |
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139 | |
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140 | echo "Following options are set in current compiling:" >> $outfile |
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141 | echo " resol_atm=${resol_atm}, resol_oce=${resol_oce}, icemodel=${icemodel}, oceanbio=${oceanbio}" >> $outfile |
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142 | echo " esmco2=${esmco2}, esmchem=${esmchem}, chemistry=${optchimie}" >> $outfile |
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143 | echo " ce0l=${ce0l}" >> $outfile |
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144 | echo " optmode = $optmode, parallel = $parallel, fcm_arch = $fcm_arch " >> $outfile |
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145 | echo " full_flag=$full_flag, full_xios=$full_xios, full_lmdz=$full_lmdz, full_orch=$full_orch, full_nemo=$full_nemo," >> $outfile |
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146 | echo >> $outfile |
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147 | |
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148 | ### Read host dependent default values |
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149 | ### These variables will not be changed if they were set as argument |
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150 | ###./host.sh $host |
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151 | # Later : Following lines should be set in host.sh file |
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152 | # begin host.sh |
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153 | if [ $fcm_arch == default ] ; then |
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154 | # Find out current host and source specific paths and commands for the host |
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155 | case $( hostname -s ) in |
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156 | jean-zay*) |
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157 | fcm_arch=X64_JEANZAY;; |
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158 | irene170|irene171|irene190|irene191|irene192|irene193) |
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159 | fcm_arch=X64_IRENE;; |
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160 | irene172|irene173|irene194|irene195) |
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161 | fcm_arch=X64_IRENE-AMD;; |
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162 | asterix*|obelix*) |
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163 | fcm_arch=ifort_LSCE |
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164 | if [ "${parallel}" == "mpi_omp" ] ; then |
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165 | echo "Warning!! Currently at Obelix hybrid mode is not possible." |
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166 | echo " Option -parallel mpi_omp is now changed to -parallel mpi" |
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167 | echo "" |
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168 | parallel=mpi |
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169 | else |
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170 | echo "You used -parallel" $parallel |
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171 | fi ;; |
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172 | ciclad*|climserv*|loholt*|camelot*) |
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173 | fcm_arch=ifort_CICLAD;; |
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174 | *) |
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175 | echo Current host is not known. You must use option -arch to specify which architecuture files to use. |
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176 | echo Exit now. |
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177 | exit |
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178 | esac |
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179 | fi |
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180 | |
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181 | # Set a link to arch.env if arch-${fcm_arch}.env file exist for current fcm_arch. |
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182 | # The link arch.env is also set in config.card and will be used by libIGCM to ensure the same running environnement. |
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183 | if [ -f ARCH/arch-${fcm_arch}.env ] ; then |
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184 | echo >> $outfile |
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185 | echo "The file ARCH/arch-${fcm_arch}.env will now be sourced with modules needed for compilation for all components." |
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186 | echo "Note that this new environement might be kept after compilation." |
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187 | echo "If this is the case, source again your personal environment after compilation. " |
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188 | echo " Personal module list before sourcing of ARCH/arch.env file:" >> $outfile |
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189 | module list >> $outfile 2>&1 |
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190 | # Get initial svn version |
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191 | svn_version=$(module list -t | grep subversion) |
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192 | |
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193 | # Make a link to this file, to be used also in config.card |
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194 | rm -f ARCH/arch.env |
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195 | ln -s arch-${fcm_arch}.env ARCH/arch.env |
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196 | |
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197 | # Source the file |
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198 | source ARCH/arch.env >> $outfile 2>&1 |
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199 | if [ X$svn_version != X ] ; then |
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200 | # Put back initial version of svn |
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201 | module load ${svn_version} |
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202 | fi |
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203 | echo >> $outfile |
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204 | echo " New module list after sourcing of ARCH/arch.env file:" >> $outfile |
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205 | module list >> $outfile 2>&1 |
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206 | fi |
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207 | |
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208 | #### 2 Do the compilation |
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209 | ## 2.1 Compile ioipsl |
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210 | cd $modipsl/modeles/IOIPSL |
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211 | echo; echo "NOW COMPILE IOIPSL" |
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212 | echo >> $outfile ; echo " NOW COMPILE IOIPSL" >> $outfile |
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213 | |
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214 | # Check if compilation with fcm is included in IOIPSL |
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215 | if [ ! -f makeioipsl_fcm ] ; then |
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216 | echo "The file makeiopsl_fcm do not exist. Probably this is not the right version of IOIPSL." |
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217 | echo "Version of IOIPSL with fcm compilation is needed to compile with this script. Stop now." |
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218 | exit |
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219 | fi |
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220 | |
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221 | echo ./makeioipsl_fcm -$optmode -parallel -arch ${fcm_arch} -arch_path $arch_path -j 8 $full_flag >> $outfile |
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222 | ./makeioipsl_fcm -$optmode -parallel -arch ${fcm_arch} -arch_path $arch_path -j 8 $full_flag >> $outfile 2>&1 |
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223 | # Test if compiling succeded |
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224 | if [[ $? != 0 ]] ; then |
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225 | echo "THERE IS A PROBLEM IN IOIPSL COMPILATION - STOP" |
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226 | exit |
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227 | fi |
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228 | |
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229 | ## 2.2 Compile oasis3-mct |
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230 | cd $modipsl/oasis3-mct/util/make_dir |
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231 | echo; echo "NOW COMPILE OASIS3-MCT" |
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232 | echo >> $outfile ; echo " NOW COMPILE OASIS3-MCT" >> $outfile |
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233 | cp $mysrc_path/OASIS3-MCT/make_${fcm_arch} make.inc |
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234 | |
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235 | echo make -f TopMakefileOasis3 >> $outfile |
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236 | make -f TopMakefileOasis3 >> $outfile 2>&1 |
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237 | |
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238 | |
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239 | ## 2.3 Compile xios |
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240 | cd $modipsl/modeles/XIOS |
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241 | echo; echo "NOW COMPILE XIOS" |
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242 | echo >> $outfile ; echo " NOW COMPILE XIOS" >> $outfile |
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243 | echo ./make_xios --use_oasis oasis3_mct --$optmode --arch $fcm_arch --arch_path $arch_path --job 4 $full_xios >> $outfile |
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244 | ./make_xios --use_oasis oasis3_mct --$optmode --arch $fcm_arch --arch_path $arch_path --job 4 $full_xios >> $outfile 2>&1 |
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245 | # Test if compiling succeded |
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246 | if [[ $? != 0 ]] ; then |
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247 | echo "THERE IS A PROBLEM IN XIOS COMPILATION - STOP" |
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248 | exit |
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249 | fi |
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250 | # Move executables to modipsl/bin |
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251 | if [ -f $modipsl/modeles/XIOS/bin/xios_server.exe ] ; then |
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252 | mv $modipsl/modeles/XIOS/bin/xios_server.exe $modipsl/bin/xios_server_${optmode}.exe |
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253 | else |
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254 | echo "THERE IS A PROBLEM IN XIOS COMPILATION EXECUTABLE MISSING - STOP" |
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255 | exit |
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256 | fi |
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257 | |
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258 | |
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259 | ## 2.4 Compile orchidee |
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260 | cd $modipsl/modeles/ORCHIDEE |
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261 | echo; echo "NOW COMPILE ORCHIDEE" |
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262 | echo >> $outfile ; echo " NOW COMPILE ORCHIDEE" >> $outfile |
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263 | |
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264 | # Check if the compilation of ORCHIDEE was previsouly interupted prematured. |
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265 | # In that case, the files fcm.bld.lock exist. If the file exist, it is here removed to avoid makeorchidee_fcm |
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266 | # to ask question and wait for interactivly answer from the user. |
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267 | if [ -f build/fcm.bld.lock ] ; then |
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268 | echo >> $outfile |
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269 | echo " WARNING!! The file ORCHIDEE/build/fcm.bld.lock exist. " >> $outfile |
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270 | echo " This means that the compilation is either currently on going in another terminal was previous interupted before the end." >> $outfile |
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271 | echo " The file will now be removed. " >> $outfile |
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272 | echo >> $outfile |
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273 | rm -f build/fcm.bld.lock |
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274 | fi |
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275 | |
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276 | echo ./makeorchidee_fcm -j 8 -xios -parallel $parallel -$optmode -arch ${fcm_arch} -arch_path $arch_path $full_orch >> $outfile |
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277 | ./makeorchidee_fcm -j 8 -xios -parallel $parallel -$optmode -arch ${fcm_arch} -arch_path $arch_path $full_orch >> $outfile 2>&1 |
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278 | # Test if compiling finished |
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279 | if [[ $? != 0 ]] ; then |
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280 | echo "THERE IS A PROBLEM IN ORCHIDEE COMPILATION - STOP" |
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281 | exit |
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282 | fi |
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283 | |
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284 | |
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285 | ## 2.5 Compile NEMO |
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286 | nemo_root=$modipsl/modeles/NEMOGCM/CONFIG |
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287 | if [ ${icemodel} == lim2 ] ; then |
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288 | addkeys="key_lim2_vp key_diahth key_oasis3" |
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289 | delkeys="key_nosignedzero key_mpp_rep" |
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290 | else |
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291 | addkeys="key_top key_pisces key_age key_cfc key_cpl_carbon_cycle key_gas key_oasis3" |
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292 | if [ ${oceanbio} == y ] ; then |
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293 | if [ ${esmco2} == y ] ; then |
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294 | if [ ${esmchem} == y ] ; then |
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295 | delkeys="key_nosignedzero key_mpp_rep" |
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296 | else |
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297 | delkeys="key_nosignedzero key_mpp_rep" |
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298 | fi |
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299 | else |
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300 | delkeys="key_nosignedzero key_mpp_rep key_cpl_carbon_cycle key_gas" |
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301 | fi |
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302 | else |
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303 | delkeys="key_nosignedzero key_mpp_rep key_top key_pisces key_cfc key_age key_cpl_carbon_cycle key_gas" |
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304 | fi |
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305 | fi |
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306 | |
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307 | if [ ${oceanbio} == n ] ; then |
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308 | echo; echo "NOW COMPILE NEMO. Resolution = ${resol_oce} with icemodel ${icemodel} and without PISCES" |
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309 | echo >> $outfile ; echo " NOW COMPILE NEMO. Resolution = ${resol_oce} with icemodel ${icemodel} and without PISCES" >> $outfile |
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310 | else |
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311 | echo; echo "NOW COMPILE NEMO. Resolution = ${resol_oce} with icemodel ${icemodel} and PISCES" |
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312 | echo >> $outfile ; echo " NOW COMPILE NEMO. Resolution = ${resol_oce} with icemodel ${icemodel} and PISCES" >> $outfile |
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313 | fi |
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314 | echo >> $outfile ; echo cd $nemo_root >> $outfile |
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315 | echo >> $outfile ; echo cp $modipsl/config/IPSLCM6/SOURCES/NEMO/arch-${fcm_arch}.fcm ../ARCH/. >> $outfile |
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316 | echo >> $outfile |
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317 | |
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318 | cd $nemo_root ; cp $mysrc_path/NEMO/arch-${fcm_arch}.fcm ../ARCH/. |
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319 | |
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320 | |
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321 | if [ ${resol_oce} == ORCA2 ] ; then cfg_wrk=ORCA2_LIM_PISCES ; fi |
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322 | if [ ${resol_oce} == ORCA1 ] ; then cfg_wrk=ORCA1_LIM3_PISCES ; fi |
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323 | if [ ${resol_oce} == ORCA025 ] ; then cfg_wrk=ORCA025_LIM3_PISCES ; fi |
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324 | |
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325 | |
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326 | echo cp $modipsl/config/IPSLCM6/SOURCES/NEMO/*.*90 $nemo_root/$cfg_wrk/MY_SRC/ >> $outfile |
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327 | echo >> $outfile |
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328 | cp $mysrc_path/NEMO/*.*90 $nemo_root/$cfg_wrk/MY_SRC/ |
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329 | |
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330 | if [ $full_nemo == y ] ; then |
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331 | # To make a full compilation, first make a clean to remove all files produced during previous compilation |
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332 | echo ./makenemo -m ${fcm_arch} -n $cfg_wrk clean >> $outfile |
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333 | echo >> $outfile |
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334 | ./makenemo -m ${fcm_arch} -n $cfg_wrk clean >> $outfile 2>&1 |
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335 | fi |
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336 | echo ./makenemo -m ${fcm_arch} -n $cfg_wrk -j16 add_key "$addkeys" del_key "$delkeys" >> $outfile |
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337 | echo >> $outfile |
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338 | ./makenemo -m ${fcm_arch} -n $cfg_wrk -j16 add_key "$addkeys" del_key "$delkeys" >> $outfile 2>&1 |
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339 | |
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340 | |
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341 | # Test if compiling finished |
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342 | if [[ $? != 0 ]] ; then |
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343 | echo "THERE IS A PROBLEM IN NEMO COMPILATION - STOP" |
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344 | exit |
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345 | fi |
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346 | |
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347 | echo >> $outfile |
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348 | echo "Move nemo executable to modipsl/bin" >> $outfile |
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349 | echo ls -lrt $nemo_root/$cfg_wrk/BLD/bin >> $outfile |
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350 | ls -lrt $nemo_root/$cfg_wrk/BLD/bin >> $outfile |
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351 | echo >> $outfile |
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352 | |
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353 | if [ -f $nemo_root/$cfg_wrk/BLD/bin/nemo.exe ] ; then |
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354 | if [ ${esmco2} == y ] && [ ${esmchem} == n ] ; then |
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355 | mv $nemo_root/$cfg_wrk/BLD/bin/nemo.exe $modipsl/bin/opa.ESMCO2_${resol_oce}_${optmode} |
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356 | elif [ ${esmco2} == y ] && [ ${esmchem} == y ] ; then |
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357 | mv $nemo_root/$cfg_wrk/BLD/bin/nemo.exe $modipsl/bin/opa.ESMCO2AER_${resol_oce}_${optmode} |
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358 | else |
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359 | mv $nemo_root/$cfg_wrk/BLD/bin/nemo.exe $modipsl/bin/opa_${resol_oce}_${optmode} |
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360 | fi |
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361 | fi |
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362 | |
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363 | |
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364 | ## 2.6 Compile LMDZ for regular latlon configuration |
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365 | # If necessary compile INCA modele with AER configuration |
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366 | if [ ${esmchem} == y ] ; then |
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367 | cd $modipsl/modeles/INCA |
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368 | #compile INCA regulat lat_lon chimie library |
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369 | echo; echo "NOW COMPILE INCA ${optchimie} on resolution = ${resol_atm}" |
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370 | echo ./makeinca_fcm -chimie ${optchimie} -$optmode -xios -parallel mpi_omp -j 8 -arch ${fcm_arch} -arch_path $arch_path $full_flag $full_inca -cplocninca >> $outfile |
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371 | ./makeinca_fcm -chimie ${optchimie} -$optmode -xios -parallel mpi_omp -j 8 -arch ${fcm_arch} -arch_path $arch_path $full_flag $full_inca -cplocninca >> $outfile 2>&1 |
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372 | |
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373 | # Test if compiling finished |
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374 | if [[ $? != 0 ]] ; then |
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375 | echo "THERE IS A PROBLEM IN INCA COMPILATION - STOP" |
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376 | exit |
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377 | fi |
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378 | |
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379 | echo "Move inca.dat modipsl/bin" |
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380 | if [[ -f $modipsl/modeles/INCA/SIMULATIONS/$optchimie/inca.dat ]] ; then |
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381 | mv $modipsl/modeles/INCA/SIMULATIONS/$optchimie/inca.dat $modipsl/bin/inca_${optchimie}.dat ; |
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382 | else |
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383 | echo "THERE IS A PROBLEM IN INCA COMPILATION - STOP" |
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384 | exit |
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385 | fi |
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386 | |
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387 | echo "Move tracer.def to modipsl/bin" |
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388 | if [[ -f $modipsl/modeles/INCA/tracer.def ]] ; then |
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389 | mv $modipsl/modeles/INCA/tracer.def $modipsl/bin/tracer_${optchimie}.def ; |
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390 | fi |
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391 | |
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392 | |
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393 | |
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394 | fi |
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395 | |
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396 | |
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397 | # Compile LMDZ regular lat-lon executable |
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398 | cd $modipsl/modeles/LMDZ |
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399 | echo; echo "NOW COMPILE LMDZ REGULAR LAT-LON MODE. Resolution = ${resol_atm}" |
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400 | echo >> $outfile ; echo " NOW COMPILE LMDZ REGULAR LAT-LON MODE. Resolution = ${resol_atm}" >> $outfile |
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401 | |
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402 | # Temporary use of SOURCES/LMDZ to handle modifications needed by LMDZ rev 4515 |
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403 | cp $mysrc_path/LMDZ/*.*90 libf/phylmd/. |
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404 | |
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405 | |
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406 | # Check if the compilation of LMDZ was previsouly interupted prematured. |
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407 | # In that case, the files dimension.h and .lock exist. If the files exist, they are here removed to avoid makelmdz_fcm |
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408 | # to ask question and wait for interactivly answer from the user. |
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409 | if [ -f libf/grid/dimensions.h ] || [ -f .lock ] ; then |
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410 | echo >> $outfile |
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411 | echo " WARNING!! The file LMDZ/libf/grid/dimension.h and/or the LMDZ/.lock exist. " >> $outfile |
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412 | echo " This means that the compilation is either currently on going in another terminal was previous interupted before the end." >> $outfile |
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413 | echo " The files dimension.h and .lock will now be removed. " >> $outfile |
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414 | echo >> $outfile |
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415 | rm -f libf/grid/dimensions.h |
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416 | rm -f .lock |
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417 | fi |
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418 | |
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419 | # Need to define the proper option for radiative code compilation. By default, we use rrtm |
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420 | case $rad in |
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421 | oldrad) opt_rad="" ;; |
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422 | rrtm) opt_rad="-rad rrtm" ;; |
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423 | ecrad) opt_rad="-rad ecrad" ;; |
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424 | *) echo Only oldrad rrtm ecrad for rad option ; exit |
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425 | esac |
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426 | |
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427 | if [ ${esmchem} == n ] ; then |
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428 | echo ./makelmdz_fcm -d ${resol_atm} -c OMCT -cosp true $opt_rad -$optmode -mem -parallel $parallel -io xios -v orchidee2.1 -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz gcm >> $outfile |
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429 | ./makelmdz_fcm -d ${resol_atm} -c OMCT -cosp true $opt_rad -$optmode -mem -parallel $parallel -io xios -v orchidee2.1 -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz gcm >> $outfile 2>&1 |
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430 | else |
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431 | #in esm aer case add chemistry option to lmdz compilation |
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432 | echo ./makelmdz_fcm -d ${resol_atm} -c OMCT -cosp true $opt_rad -rrtm true -$optmode -mem -parallel $parallel -chimie INCA -io xios -v orchidee2.1 -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz gcm >> $outfile |
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433 | ./makelmdz_fcm -d ${resol_atm} -c OMCT -cosp true $opt_rad -rrtm true -$optmode -mem -parallel $parallel -chimie INCA -io xios -v orchidee2.1 -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz gcm >> $outfile 2>&1 |
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434 | fi |
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435 | |
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436 | # Test if compiling finished |
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437 | if [[ $? != 0 ]] ; then |
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438 | echo "THERE IS A PROBLEM IN LMDZ REGULAR LATLON COMPILATION - STOP" |
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439 | exit |
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440 | fi |
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441 | |
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442 | |
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443 | # Move executables to modipsl/bin folder |
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444 | echo >> $outfile |
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445 | echo "Move gcm.e executable to modipsl/bin" >> $outfile |
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446 | echo ls -lrt $modipsl/modeles/LMDZ/bin >> $outfile |
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447 | ls -lrt $modipsl/modeles/LMDZ/bin >> $outfile |
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448 | echo >> $outfile |
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449 | |
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450 | |
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451 | suffix=_${resol_atm}_phylmd |
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452 | suffix=${suffix}_${rad} |
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453 | suffix=${suffix}_para_mem_orch_couple |
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454 | if [ ${esmchem} == n ] ; then |
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455 | suffix=${suffix}.e |
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456 | else |
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457 | suffix=${suffix}_inca.e |
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458 | fi |
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459 | |
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460 | echo gcm suffix = $suffix |
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461 | |
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462 | if [ -f $modipsl/modeles/LMDZ/bin/gcm${suffix} ] ; then |
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463 | if [ ${esmchem} == n ] ; then |
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464 | mv $modipsl/modeles/LMDZ/bin/gcm${suffix} $modipsl/bin/gcm_${resol_atm}_${optmode}.e |
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465 | else |
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466 | mv $modipsl/modeles/LMDZ/bin/gcm${suffix} $modipsl/bin/gcm_${resol_atm}_${optmode}_${optchimie}.e |
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467 | fi |
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468 | else |
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469 | echo "ERROR gcm${suffix} executable does not exist." |
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470 | echo "THERE IS A PROBLEM IN LMDZ REGULAR LATLON COMPILATION - STOP" |
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471 | exit |
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472 | fi |
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473 | |
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474 | |
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475 | |
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476 | |
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477 | |
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478 | # Compile ce0l initialization program for LMDZ regular lat-lon exectuable |
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479 | if [ $ce0l == y ] ; then |
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480 | echo; echo "NOW COMPILE CE0L OF LMDZ. Resolution = ${resol_atm}" |
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481 | echo >> $outfile ; echo " NOW COMPILE CE0L OF LMDZ. Resolution = ${resol_atm}" >> $outfile |
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482 | |
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483 | echo ./makelmdz_fcm -d ${resol_atm} $opt_rad -$optmode -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz ce0l >> $outfile |
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484 | ./makelmdz_fcm -d ${resol_atm} $opt_rad -$optmode -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz ce0l >> $outfile 2>&1 |
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485 | |
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486 | # 1er aout - remove xios from ce0l compilation # |
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487 | # echo ./makelmdz_fcm -d ${resol_atm} $opt_rad -$optmode -io xios -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz ce0l >> $outfile |
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488 | # ./makelmdz_fcm -d ${resol_atm} $opt_rad -$optmode -io xios -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz ce0l >> $outfile 2>&1 |
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489 | |
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490 | # Test if compiling finished |
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491 | if [[ $? != 0 ]] ; then |
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492 | echo "THERE IS A PROBLEM IN CE0L (LMDZ) REGULAR LATLON COMPILATION - STOP" |
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493 | exit |
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494 | fi |
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495 | |
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496 | |
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497 | # Move executables to modipsl/bin folder |
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498 | echo >> $outfile |
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499 | echo "Move ce0l.e executable to modipsl/bin" >> $outfile |
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500 | echo ls -lrt $modipsl/modeles/LMDZ/bin >> $outfile |
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501 | ls -lrt $modipsl/modeles/LMDZ/bin >> $outfile |
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502 | echo >> $outfile |
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503 | |
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504 | suffix=_${resol_atm}_phylmd_seq.e |
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505 | if [ $lmdzsvn -ge 4186 ] ; then suffix=_${resol_atm}_phylmd_${rad}_seq.e ; fi |
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506 | echo ce0l suffix = $suffix |
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507 | |
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508 | if [ -f $modipsl/modeles/LMDZ/bin/ce0l${suffix} ] ; then |
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509 | mv $modipsl/modeles/LMDZ/bin/ce0l${suffix} $modipsl/bin/ce0l_${resol_atm}_${optmode}.e |
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510 | else |
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511 | echo "ERROR ce0l${suffix} executable does not exist." |
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512 | echo "THERE IS A PROBLEM IN CE0L (LMDZ) REGULAR LATLON COMPILATION - STOP" |
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513 | exit |
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514 | fi |
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515 | fi |
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516 | |
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517 | echo >>$outfile ; echo "ALL COMPILING FINISHED" >> $outfile |
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518 | echo ls -lrt modipsl/bin >> $outfile |
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519 | ls -lrt $modipsl/bin >> $outfile |
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520 | |
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521 | echo; echo "ALL COMPILING FINISHED" ; echo |
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522 | echo "Executables are found in modipsl/bin" |
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523 | echo "Check that executable names correspond with the name set in config.card before launching the job" |
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524 | echo ls -lrt modipsl/bin |
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525 | ls -lrt $modipsl/bin |
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526 | |
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527 | date |
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528 | |
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529 | exit |
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530 | |
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531 | |
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