| 1 | #!/bin/bash |
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| 2 | #set -vx |
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| 3 | # Default options |
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| 4 | # |
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| 5 | # |
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| 6 | # |
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| 7 | date |
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| 8 | #### 1 Set up the compiling options |
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| 9 | #### Define some directories |
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| 10 | submitdir=$( pwd ) |
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| 11 | modipsl=$submitdir/../.. |
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| 12 | arch_path=$submitdir/ARCH |
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| 13 | mysrc_path=$submitdir/SOURCES |
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| 14 | |
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| 15 | #### Set default options |
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| 16 | # Atmospheric resolution, for LMDZ/ORCHIDEE in regular mode |
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| 17 | resol_atm=144x142x79 |
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| 18 | # Oceanic resolution, for NEMO (ORCA2/ORCA1/ORCA025) |
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| 19 | resol_oce=ORCA1 |
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| 20 | # Version of ice model lim2/lim3 |
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| 21 | icemodel=lim3 |
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| 22 | # Coupled with ocean biogeochemistry (y/n) |
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| 23 | oceanbio=y |
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| 24 | # Version ESM-CYCLE : coupling between INCA and PISCES (y/n) |
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| 25 | esmcycle=n |
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| 26 | # Also compile ce0l subprogram to LMDZ (y/n) |
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| 27 | ce0l=n |
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| 28 | # choose radiative code compilation option |
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| 29 | rad=rrtm |
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| 30 | opt_rad="" |
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| 31 | # choose inca chemistry |
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| 32 | optchimie=AER |
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| 33 | |
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| 34 | # Optimization mode |
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| 35 | # optmode=prod/dev/debug |
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| 36 | optmode=prod |
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| 37 | # fcm_arch |
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| 38 | fcm_arch=default |
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| 39 | # Default values to be overritten |
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| 40 | parallel=mpi_omp |
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| 41 | export fcm_arch parallel xios |
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| 42 | full_flag="" |
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| 43 | full_nemo=n |
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| 44 | full_inca="" |
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| 45 | full_xios="" |
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| 46 | full_lmdz="" |
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| 47 | full_orch="" |
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| 48 | |
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| 49 | |
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| 50 | |
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| 51 | # Output text file for compilation of each component |
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| 52 | datestr=`LC_ALL=C date +"%Y%m%dT%H%M"` |
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| 53 | outfile=$submitdir/out_compile_ipslcm6.$datestr |
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| 54 | echo > $outfile |
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| 55 | echo; echo "Text output from compilation will be stored in file out_compile_ipslcm6.$datestr"; echo |
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| 56 | |
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| 57 | #### Read arguments |
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| 58 | # Loop over all arguments to modify default set up |
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| 59 | while (($# > 0)) ; do |
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| 60 | case $1 in |
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| 61 | "-h") cat <<end_help |
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| 62 | ######################################################################## |
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| 63 | # Usage of the script compile_ipslcm6.sh |
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| 64 | ######################################################################## |
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| 65 | |
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| 66 | ./compile_ipslcm6.sh [Options] |
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| 67 | |
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| 68 | |
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| 69 | Options: [LR / VLR / MR1 / MR025] Model resolution, choose only one. Default: LR. |
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| 70 | [ESMCYCLE] Compile IPSLCM6 for interactive chemistry, and transfer from PISCES to LMDZ and INCA. |
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| 71 | [-full] Full recompilation of all components. This option can be added to all other options. |
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| 72 | [-cleannemo] Full recompilation of NEMO component only. |
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| 73 | [-debug / -dev / -prod] Level of optimization. One of these can be added to all other compile options. Default: -prod. |
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| 74 | |
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| 75 | |
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| 76 | Example 1: Default compilation of IPSLCM6 for resolution LR. |
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| 77 | (Resolution atmos: 144x142x79, ocean: ORCA1) |
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| 78 | ./compile_ipslcm6.sh |
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| 79 | |
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| 80 | Example 2: Compilation of IPSLCM6 for resolution MR025. |
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| 81 | (atmos: 256x256x79, ocean: ORCA025, NOPISCES) |
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| 82 | ./compile_ipslcm6.sh MR025 |
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| 83 | |
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| 84 | Example 3: Default resolution (LR) compiled in debug mode. |
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| 85 | ./compile_ipslcm6.sh -debug |
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| 86 | |
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| 87 | Example 4: Default compilation with full recompilation of all components. No clean is needed. |
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| 88 | ./compile_ipslcm6.sh -full |
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| 89 | |
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| 90 | Example 5: Full recompilation of resolution MR025 in debug mode. |
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| 91 | ./compile_ipslcm6.sh MR025 -debug -full |
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| 92 | |
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| 93 | Example 6: Choose radiative schema for LMDZ (oldrad/rrtm/ecrad). Default is rrtm. |
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| 94 | ./compile_ipslcm6.sh MR025 -rad ecrad |
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| 95 | |
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| 96 | Example 7: Compilation of IPSLCM6 for ESM with coupling between ATM/OCE and INCA chemistry AER. |
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| 97 | ./compile_ipslcm6.sh ESMCYCLE -chimie AER |
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| 98 | |
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| 99 | Example 8: Compilation of IPSLCM6 for ESM with INCA chemistry and choose the chemistry, without coupling between INCA and PISCES. |
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| 100 | ./compile_ipslcm6.sh -chimie GES |
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| 101 | |
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| 102 | end_help |
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| 103 | exit;; |
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| 104 | "VLR") resol_atm=96x95x39; resol_oce=ORCA2 ; icemodel=lim2; oceanbio=y; shift ;; |
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| 105 | "LR") resol_atm=144x142x79; resol_oce=ORCA1 ; icemodel=lim3; oceanbio=y; shift ;; |
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| 106 | "MR1") resol_atm=256x256x79; resol_oce=ORCA1 ; icemodel=lim3; oceanbio=y; shift ;; |
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| 107 | "MR025") resol_atm=256x256x79; resol_oce=ORCA025 ; icemodel=lim3; oceanbio=n; shift ;; |
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| 108 | "ESMCYCLE") esmcycle=y; shift ;; |
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| 109 | "CE0L") ce0l=y ; shift ;; |
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| 110 | "-rad") rad=$2; shift ; shift;; |
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| 111 | "-parallel") parallel=$2 ; shift ; shift ;; |
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| 112 | "-arch") fcm_arch="$2" ; shift ; shift ;; |
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| 113 | "-debug") optmode=debug ; shift ;; |
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| 114 | "-dev") optmode=dev ; shift ;; |
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| 115 | "-prod") optmode=prod ; shift ;; |
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| 116 | "-full") full_flag="-full"; full_nemo=y ; full_xios="--full" ; full_lmdz="-full" ; full_orch="-full" ; shift ;; |
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| 117 | "-full_xios") full_xios="--full" ; shift ;; # Note only full_xios is using double dash: --full |
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| 118 | "-full_lmdz") full_lmdz="-full" ; shift ;; |
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| 119 | "-full_orch") full_orch="-full" ; shift ;; |
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| 120 | "-full_nemo") full_nemo=y ; shift ;; |
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| 121 | "-full_inca") full_inca="-clean"; shift ;; |
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| 122 | "-cleannemo") full_nemo=y ; shift ;; |
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| 123 | "-chimie") optchimie=$2; shift ; shift;; |
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| 124 | |
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| 125 | *) echo "unknown option "$1" , exiting..." ; exit |
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| 126 | esac |
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| 127 | done |
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| 128 | |
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| 129 | echo "Following options are set in current compiling:" >> $outfile |
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| 130 | echo " resol_atm=${resol_atm}, resol_oce=${resol_oce}, icemodel=${icemodel}, oceanbio=${oceanbio}" >> $outfile |
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| 131 | echo " esmcycle=${esmcycle}, chemistry=${optchimie}" >> $outfile |
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| 132 | echo " ce0l=${ce0l}" >> $outfile |
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| 133 | echo " optmode = $optmode, parallel = $parallel, fcm_arch = $fcm_arch " >> $outfile |
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| 134 | echo " full_flag=$full_flag, full_xios=$full_xios, full_lmdz=$full_lmdz, full_orch=$full_orch, full_nemo=$full_nemo," >> $outfile |
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| 135 | echo >> $outfile |
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| 136 | |
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| 137 | ### Read host dependent default values |
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| 138 | ### These variables will not be changed if they were set as argument |
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| 139 | ###./host.sh $host |
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| 140 | # Later : Following lines should be set in host.sh file |
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| 141 | # begin host.sh |
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| 142 | if [ $fcm_arch == default ] ; then |
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| 143 | # Find out current host and source specific paths and commands for the host |
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| 144 | case $( hostname -s ) in |
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| 145 | jean-zay*) |
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| 146 | if [[ $( hostname -s ) != *"pp"* ]] ; then |
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| 147 | echo "Warning! You MUST compile on jean-zay-pp." |
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| 148 | echo "EXIT" |
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| 149 | exit |
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| 150 | else |
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| 151 | fcm_arch=X64_JEANZAY |
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| 152 | fi ;; |
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| 153 | irene170|irene171|irene190|irene191|irene192|irene193) |
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| 154 | fcm_arch=X64_IRENE;; |
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| 155 | irene172|irene173|irene194|irene195) |
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| 156 | fcm_arch=X64_IRENE-AMD;; |
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| 157 | asterix*|obelix*) |
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| 158 | fcm_arch=ifort_LSCE |
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| 159 | if [ "${parallel}" == "mpi_omp" ] ; then |
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| 160 | echo "Warning!! Currently at Obelix hybrid mode is not possible." |
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| 161 | echo " Option -parallel mpi_omp is now changed to -parallel mpi" |
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| 162 | echo "" |
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| 163 | parallel=mpi |
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| 164 | else |
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| 165 | echo "You used -parallel" $parallel |
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| 166 | fi ;; |
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| 167 | ciclad*|climserv*|loholt*|camelot*) |
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| 168 | fcm_arch=ifort_CICLAD;; |
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| 169 | *) |
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| 170 | echo Current host is not known. You must use option -arch to specify which architecuture files to use. |
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| 171 | echo Exit now. |
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| 172 | exit |
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| 173 | esac |
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| 174 | fi |
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| 175 | |
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| 176 | # Set a link to arch.env if arch-${fcm_arch}.env file exist for current fcm_arch. |
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| 177 | # The link arch.env is also set in config.card and will be used by libIGCM to ensure the same running environnement. |
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| 178 | if [ -f ARCH/arch-${fcm_arch}.env ] ; then |
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| 179 | echo >> $outfile |
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| 180 | echo "The file ARCH/arch-${fcm_arch}.env will now be sourced with modules needed for compilation for all components." |
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| 181 | echo "Note that this new environement might be kept after compilation." |
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| 182 | echo "If this is the case, source again your personal environment after compilation. " |
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| 183 | echo " Personal module list before sourcing of ARCH/arch.env file:" >> $outfile |
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| 184 | module list >> $outfile 2>&1 |
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| 185 | # Get initial svn version |
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| 186 | svn_version=$(module list -t | grep subversion) |
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| 187 | |
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| 188 | # Make a link to this file, to be used also in config.card |
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| 189 | rm -f ARCH/arch.env |
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| 190 | ln -s arch-${fcm_arch}.env ARCH/arch.env |
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| 191 | |
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| 192 | # Source the file |
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| 193 | source ARCH/arch.env >> $outfile 2>&1 |
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| 194 | if [ X$svn_version != X ] ; then |
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| 195 | # Put back initial version of svn |
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| 196 | module load ${svn_version} |
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| 197 | fi |
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| 198 | echo >> $outfile |
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| 199 | echo " New module list after sourcing of ARCH/arch.env file:" >> $outfile |
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| 200 | module list >> $outfile 2>&1 |
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| 201 | fi |
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| 202 | |
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| 203 | #### 2 Do the compilation |
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| 204 | ## 2.1 Compile ioipsl |
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| 205 | cd $modipsl/modeles/IOIPSL |
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| 206 | echo; echo "NOW COMPILE IOIPSL" |
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| 207 | echo >> $outfile ; echo " NOW COMPILE IOIPSL" >> $outfile |
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| 208 | |
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| 209 | # Check if compilation with fcm is included in IOIPSL |
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| 210 | if [ ! -f makeioipsl_fcm ] ; then |
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| 211 | echo "The file makeiopsl_fcm do not exist. Probably this is not the right version of IOIPSL." |
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| 212 | echo "Version of IOIPSL with fcm compilation is needed to compile with this script. Stop now." |
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| 213 | exit |
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| 214 | fi |
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| 215 | |
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| 216 | echo ./makeioipsl_fcm -$optmode -parallel -arch ${fcm_arch} -arch_path $arch_path -j 8 $full_flag >> $outfile |
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| 217 | ./makeioipsl_fcm -$optmode -parallel -arch ${fcm_arch} -arch_path $arch_path -j 8 $full_flag >> $outfile 2>&1 |
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| 218 | # Test if compiling succeded |
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| 219 | if [[ $? != 0 ]] ; then |
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| 220 | echo "THERE IS A PROBLEM IN IOIPSL COMPILATION - STOP" |
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| 221 | exit |
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| 222 | fi |
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| 223 | |
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| 224 | ## 2.2 Compile oasis3-mct |
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| 225 | cd $modipsl/oasis3-mct/util/make_dir |
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| 226 | echo; echo "NOW COMPILE OASIS3-MCT" |
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| 227 | echo >> $outfile ; echo " NOW COMPILE OASIS3-MCT" >> $outfile |
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| 228 | cp $mysrc_path/OASIS3-MCT/make_${fcm_arch} make.inc |
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| 229 | |
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| 230 | echo make -f TopMakefileOasis3 >> $outfile |
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| 231 | make -f TopMakefileOasis3 >> $outfile 2>&1 |
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| 232 | |
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| 233 | |
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| 234 | ## 2.3 Compile xios |
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| 235 | cd $modipsl/modeles/XIOS |
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| 236 | echo; echo "NOW COMPILE XIOS" |
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| 237 | echo >> $outfile ; echo " NOW COMPILE XIOS" >> $outfile |
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| 238 | echo ./make_xios --use_oasis oasis3_mct --$optmode --arch $fcm_arch --arch_path $arch_path --job 4 $full_xios >> $outfile |
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| 239 | ./make_xios --use_oasis oasis3_mct --$optmode --arch $fcm_arch --arch_path $arch_path --job 4 $full_xios >> $outfile 2>&1 |
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| 240 | # Test if compiling succeded |
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| 241 | if [[ $? != 0 ]] ; then |
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| 242 | echo "THERE IS A PROBLEM IN XIOS COMPILATION - STOP" |
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| 243 | exit |
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| 244 | fi |
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| 245 | # Move executables to modipsl/bin |
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| 246 | if [ -f $modipsl/modeles/XIOS/bin/xios_server.exe ] ; then |
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| 247 | mv $modipsl/modeles/XIOS/bin/xios_server.exe $modipsl/bin/xios_server_${optmode}.exe |
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| 248 | else |
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| 249 | echo "THERE IS A PROBLEM IN XIOS COMPILATION EXECUTABLE MISSING - STOP" |
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| 250 | exit |
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| 251 | fi |
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| 252 | |
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| 253 | |
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| 254 | ## 2.4 Compile orchidee |
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| 255 | cd $modipsl/modeles/ORCHIDEE |
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| 256 | echo; echo "NOW COMPILE ORCHIDEE" |
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| 257 | echo >> $outfile ; echo " NOW COMPILE ORCHIDEE" >> $outfile |
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| 258 | |
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| 259 | # Check if the compilation of ORCHIDEE was previsouly interupted prematured. |
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| 260 | # In that case, the files fcm.bld.lock exist. If the file exist, it is here removed to avoid makeorchidee_fcm |
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| 261 | # to ask question and wait for interactivly answer from the user. |
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| 262 | if [ -f build/fcm.bld.lock ] ; then |
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| 263 | echo >> $outfile |
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| 264 | echo " WARNING!! The file ORCHIDEE/build/fcm.bld.lock exist. " >> $outfile |
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| 265 | echo " This means that the compilation is either currently on going in another terminal was previous interupted before the end." >> $outfile |
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| 266 | echo " The file will now be removed. " >> $outfile |
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| 267 | echo >> $outfile |
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| 268 | rm -f build/fcm.bld.lock |
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| 269 | fi |
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| 270 | |
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| 271 | echo ./makeorchidee_fcm -j 8 -xios -parallel $parallel -$optmode -arch ${fcm_arch} -arch_path $arch_path $full_orch >> $outfile |
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| 272 | ./makeorchidee_fcm -j 8 -xios -parallel $parallel -$optmode -arch ${fcm_arch} -arch_path $arch_path $full_orch >> $outfile 2>&1 |
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| 273 | # Test if compiling finished |
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| 274 | if [[ $? != 0 ]] ; then |
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| 275 | echo "THERE IS A PROBLEM IN ORCHIDEE COMPILATION - STOP" |
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| 276 | exit |
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| 277 | fi |
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| 278 | |
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| 279 | |
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| 280 | ## 2.5 Compile NEMO |
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| 281 | nemo_root=$modipsl/modeles/NEMOGCM/CONFIG |
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| 282 | if [ ${icemodel} == lim2 ] ; then |
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| 283 | addkeys="key_lim2_vp key_diahth key_oasis3" |
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| 284 | delkeys="key_nosignedzero key_mpp_rep" |
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| 285 | else |
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| 286 | addkeys="key_top key_pisces key_age key_cfc key_cpl_carbon_cycle key_gas key_oasis3" |
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| 287 | if [ ${oceanbio} == y ] ; then |
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| 288 | if [ ${esmcycle} == y ] ; then |
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| 289 | delkeys="key_nosignedzero key_mpp_rep key_cpl_carbon_cycle" |
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| 290 | else |
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| 291 | delkeys="key_nosignedzero key_mpp_rep key_cpl_carbon_cycle key_gas" |
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| 292 | fi |
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| 293 | else |
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| 294 | delkeys="key_nosignedzero key_mpp_rep key_top key_pisces key_cfc key_age key_cpl_carbon_cycle key_gas" |
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| 295 | fi |
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| 296 | fi |
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| 297 | |
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| 298 | if [ ${oceanbio} == n ] ; then |
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| 299 | echo; echo "NOW COMPILE NEMO. Resolution = ${resol_oce} with icemodel ${icemodel} and without PISCES" |
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| 300 | echo >> $outfile ; echo " NOW COMPILE NEMO. Resolution = ${resol_oce} with icemodel ${icemodel} and without PISCES" >> $outfile |
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| 301 | else |
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| 302 | echo; echo "NOW COMPILE NEMO. Resolution = ${resol_oce} with icemodel ${icemodel} and PISCES" |
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| 303 | echo >> $outfile ; echo " NOW COMPILE NEMO. Resolution = ${resol_oce} with icemodel ${icemodel} and PISCES" >> $outfile |
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| 304 | fi |
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| 305 | echo >> $outfile ; echo cd $nemo_root >> $outfile |
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| 306 | echo >> $outfile ; echo cp $modipsl/config/IPSLCM6/SOURCES/NEMO/arch-${fcm_arch}.fcm ../ARCH/. >> $outfile |
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| 307 | echo >> $outfile |
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| 308 | |
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| 309 | cd $nemo_root ; cp $mysrc_path/NEMO/arch-${fcm_arch}.fcm ../ARCH/. |
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| 310 | |
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| 311 | |
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| 312 | if [ ${resol_oce} == ORCA2 ] ; then cfg_wrk=ORCA2_LIM_PISCES ; fi |
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| 313 | if [ ${resol_oce} == ORCA1 ] ; then cfg_wrk=ORCA1_LIM3_PISCES ; fi |
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| 314 | if [ ${resol_oce} == ORCA025 ] ; then cfg_wrk=ORCA025_LIM3_PISCES ; fi |
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| 315 | |
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| 316 | |
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| 317 | echo cp $modipsl/config/IPSLCM6/SOURCES/NEMO/*.*90 $nemo_root/$cfg_wrk/MY_SRC/ >> $outfile |
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| 318 | echo >> $outfile |
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| 319 | cp $mysrc_path/NEMO/*.*90 $nemo_root/$cfg_wrk/MY_SRC/ |
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| 320 | |
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| 321 | if [ $full_nemo == y ] ; then |
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| 322 | # To make a full compilation, first make a clean to remove all files produced during previous compilation |
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| 323 | echo ./makenemo -m ${fcm_arch} -n $cfg_wrk clean >> $outfile |
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| 324 | echo >> $outfile |
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| 325 | ./makenemo -m ${fcm_arch} -n $cfg_wrk clean >> $outfile 2>&1 |
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| 326 | fi |
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| 327 | echo ./makenemo -m ${fcm_arch} -n $cfg_wrk -j16 add_key "$addkeys" del_key "$delkeys" >> $outfile |
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| 328 | echo >> $outfile |
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| 329 | ./makenemo -m ${fcm_arch} -n $cfg_wrk -j16 add_key "$addkeys" del_key "$delkeys" >> $outfile 2>&1 |
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| 330 | |
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| 331 | |
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| 332 | # Test if compiling finished |
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| 333 | if [[ $? != 0 ]] ; then |
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| 334 | echo "THERE IS A PROBLEM IN NEMO COMPILATION - STOP" |
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| 335 | exit |
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| 336 | fi |
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| 337 | |
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| 338 | echo >> $outfile |
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| 339 | echo "Move NEMO executable to modipsl/bin" >> $outfile |
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| 340 | echo ls -lrt $nemo_root/$cfg_wrk/BLD/bin >> $outfile |
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| 341 | ls -lrt $nemo_root/$cfg_wrk/BLD/bin >> $outfile |
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| 342 | echo >> $outfile |
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| 343 | |
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| 344 | if [ -f $nemo_root/$cfg_wrk/BLD/bin/nemo.exe ] ; then |
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| 345 | if [ ${esmcycle} == y ] ; then |
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| 346 | mv $nemo_root/$cfg_wrk/BLD/bin/nemo.exe $modipsl/bin/opa.ESMCYCLE_${resol_oce}_${optmode} |
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| 347 | else |
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| 348 | mv $nemo_root/$cfg_wrk/BLD/bin/nemo.exe $modipsl/bin/opa_${resol_oce}_${optmode} |
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| 349 | fi |
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| 350 | fi |
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| 351 | |
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| 352 | |
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| 353 | ## 2.6 Compile LMDZ for regular latlon configuration |
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| 354 | # If necessary compile INCA modele with AER configuration |
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| 355 | cd $modipsl/modeles/INCA |
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| 356 | #compile INCA regulat lat_lon chimie library |
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| 357 | echo; echo "NOW COMPILE INCA ${optchimie} on resolution = ${resol_atm}" |
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| 358 | |
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| 359 | if [ ${esmcycle} == y ] ; then |
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| 360 | |
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| 361 | echo ./makeinca_fcm -chimie ${optchimie} -cplocninca -$optmode -xios -parallel mpi_omp -j 8 -arch ${fcm_arch} -arch_path $arch_path $full_flag $full_inca -cplocninca >> $outfile |
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| 362 | ./makeinca_fcm -chimie ${optchimie} -cplocninca -$optmode -xios -parallel mpi_omp -j 8 -arch ${fcm_arch} -arch_path $arch_path $full_flag $full_inca -cplocninca >> $outfile 2>&1 |
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| 363 | else |
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| 364 | echo ./makeinca_fcm -chimie ${optchimie} -$optmode -xios -parallel mpi_omp -j 8 -arch ${fcm_arch} -arch_path $arch_path $full_flag $full_inca -cplocninca >> $outfile |
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| 365 | ./makeinca_fcm -chimie ${optchimie} -$optmode -xios -parallel mpi_omp -j 8 -arch ${fcm_arch} -arch_path $arch_path $full_flag $full_inca -cplocninca >> $outfile 2>&1 |
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| 366 | fi |
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| 367 | |
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| 368 | # Test if compiling finished |
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| 369 | if [[ $? != 0 ]] ; then |
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| 370 | echo "THERE IS A PROBLEM IN INCA COMPILATION - STOP" |
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| 371 | exit |
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| 372 | fi |
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| 373 | |
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| 374 | echo "Move inca.dat to modipsl/bin" |
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| 375 | if [[ -f $modipsl/modeles/INCA/SIMULATIONS/$optchimie/inca.dat ]] ; then |
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| 376 | mv $modipsl/modeles/INCA/SIMULATIONS/$optchimie/inca.dat $modipsl/bin/inca_${optchimie}.dat ; |
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| 377 | else |
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| 378 | echo "THERE IS A PROBLEM IN INCA COMPILATION - STOP" |
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| 379 | exit |
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| 380 | fi |
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| 381 | |
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| 382 | echo "Move tracer.def to modipsl/bin/tracer_${optchimie}.def" |
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| 383 | if [[ -f $modipsl/modeles/INCA/tracer.def ]] ; then |
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| 384 | mv $modipsl/modeles/INCA/tracer.def $modipsl/bin/tracer_${optchimie}.def ; |
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| 385 | fi |
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| 386 | |
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| 387 | |
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| 388 | # Compile LMDZ regular lat-lon executable |
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| 389 | cd $modipsl/modeles/LMDZ |
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| 390 | echo; echo "NOW COMPILE LMDZ REGULAR LAT-LON MODE. Resolution = ${resol_atm}" |
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| 391 | echo >> $outfile ; echo " NOW COMPILE LMDZ REGULAR LAT-LON MODE. Resolution = ${resol_atm}" >> $outfile |
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| 392 | |
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| 393 | # Temporary use of SOURCES/LMDZ to handle modifications needed by LMDZ rev 4515 |
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| 394 | cp $mysrc_path/LMDZ/*.*90 libf/phylmd/. |
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| 395 | |
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| 396 | |
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| 397 | # Check if the compilation of LMDZ was previsouly interupted prematured. |
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| 398 | # In that case, the files dimension.h and .lock exist. If the files exist, they are here removed to avoid makelmdz_fcm |
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| 399 | # to ask question and wait for interactivly answer from the user. |
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| 400 | if [ -f libf/grid/dimensions.h ] || [ -f .lock ] ; then |
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| 401 | echo >> $outfile |
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| 402 | echo " WARNING!! The file LMDZ/libf/grid/dimension.h and/or the LMDZ/.lock exist. " >> $outfile |
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| 403 | echo " This means that the compilation is either currently on going in another terminal was previous interupted before the end." >> $outfile |
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| 404 | echo " The files dimension.h and .lock will now be removed. " >> $outfile |
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| 405 | echo >> $outfile |
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| 406 | rm -f libf/grid/dimensions.h |
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| 407 | rm -f .lock |
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| 408 | fi |
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| 409 | |
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| 410 | # Need to define the proper option for radiative code compilation. By default, we use rrtm |
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| 411 | case $rad in |
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| 412 | oldrad) opt_rad="" ;; |
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| 413 | rrtm) opt_rad="-rad rrtm" ;; |
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| 414 | ecrad) opt_rad="-rad ecrad" ;; |
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| 415 | *) echo Only oldrad rrtm ecrad for rad option ; exit |
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| 416 | esac |
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| 417 | |
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| 418 | # In ESM AER case add chemistry option to LMDZ compilation |
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| 419 | echo ./makelmdz_fcm -d ${resol_atm} -c OMCT -cosp true $opt_rad -rrtm true -$optmode -mem -parallel $parallel -chimie INCA -io xios -v orchidee2.1 -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz gcm >> $outfile |
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| 420 | ./makelmdz_fcm -d ${resol_atm} -c OMCT -cosp true $opt_rad -rrtm true -$optmode -mem -parallel $parallel -chimie INCA -io xios -v orchidee2.1 -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz gcm >> $outfile 2>&1 |
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| 421 | |
|---|
| 422 | # Test if compiling finished |
|---|
| 423 | if [[ $? != 0 ]] ; then |
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| 424 | echo "THERE IS A PROBLEM IN LMDZ REGULAR LATLON COMPILATION - STOP" |
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| 425 | exit |
|---|
| 426 | fi |
|---|
| 427 | |
|---|
| 428 | # Move executables to modipsl/bin folder |
|---|
| 429 | echo >> $outfile |
|---|
| 430 | echo "Move gcm.e executable to modipsl/bin" >> $outfile |
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| 431 | echo ls -lrt $modipsl/modeles/LMDZ/bin >> $outfile |
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| 432 | ls -lrt $modipsl/modeles/LMDZ/bin >> $outfile |
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| 433 | echo >> $outfile |
|---|
| 434 | |
|---|
| 435 | suffix=_${resol_atm}_phylmd |
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| 436 | suffix=${suffix}_${rad} |
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| 437 | suffix=${suffix}_para_mem_orch_couple |
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| 438 | suffix=${suffix}_inca.e |
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| 439 | |
|---|
| 440 | echo gcm suffix = $suffix |
|---|
| 441 | |
|---|
| 442 | if [ -f $modipsl/modeles/LMDZ/bin/gcm${suffix} ] ; then |
|---|
| 443 | mv $modipsl/modeles/LMDZ/bin/gcm${suffix} $modipsl/bin/gcm_${resol_atm}_${optmode}_${optchimie}.e |
|---|
| 444 | cd $modipsl/bin |
|---|
| 445 | rm -f gcm_${resol_atm}_${optmode}.e |
|---|
| 446 | ln -s gcm_${resol_atm}_${optmode}_${optchimie}.e gcm_${resol_atm}_${optmode}.e |
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| 447 | else |
|---|
| 448 | echo "ERROR gcm${suffix} executable does not exist." |
|---|
| 449 | echo "THERE IS A PROBLEM IN LMDZ REGULAR LATLON COMPILATION - STOP" |
|---|
| 450 | exit |
|---|
| 451 | fi |
|---|
| 452 | |
|---|
| 453 | # Compile ce0l initialization program for LMDZ regular lat-lon executable |
|---|
| 454 | if [ $ce0l == y ] ; then |
|---|
| 455 | echo; echo "NOW COMPILE CE0L OF LMDZ. Resolution = ${resol_atm}" |
|---|
| 456 | echo >> $outfile ; echo " NOW COMPILE CE0L OF LMDZ. Resolution = ${resol_atm}" >> $outfile |
|---|
| 457 | |
|---|
| 458 | echo ./makelmdz_fcm -d ${resol_atm} $opt_rad -$optmode -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz ce0l >> $outfile |
|---|
| 459 | ./makelmdz_fcm -d ${resol_atm} $opt_rad -$optmode -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz ce0l >> $outfile 2>&1 |
|---|
| 460 | |
|---|
| 461 | # 1er aout - remove XIOS from ce0l compilation # |
|---|
| 462 | # echo ./makelmdz_fcm -d ${resol_atm} $opt_rad -$optmode -io xios -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz ce0l >> $outfile |
|---|
| 463 | # ./makelmdz_fcm -d ${resol_atm} $opt_rad -$optmode -io xios -arch $fcm_arch -arch_path $arch_path -j 8 $full_lmdz ce0l >> $outfile 2>&1 |
|---|
| 464 | |
|---|
| 465 | # Test if compiling finished |
|---|
| 466 | if [[ $? != 0 ]] ; then |
|---|
| 467 | echo "THERE IS A PROBLEM IN CE0L (LMDZ) REGULAR LATLON COMPILATION - STOP" |
|---|
| 468 | exit |
|---|
| 469 | fi |
|---|
| 470 | |
|---|
| 471 | # Move executables to modipsl/bin folder |
|---|
| 472 | echo >> $outfile |
|---|
| 473 | echo "Move ce0l.e executable to modipsl/bin" >> $outfile |
|---|
| 474 | echo ls -lrt $modipsl/modeles/LMDZ/bin >> $outfile |
|---|
| 475 | ls -lrt $modipsl/modeles/LMDZ/bin >> $outfile |
|---|
| 476 | echo >> $outfile |
|---|
| 477 | |
|---|
| 478 | suffix=_${resol_atm}_phylmd_seq.e |
|---|
| 479 | if [ $lmdzsvn -ge 4186 ] ; then suffix=_${resol_atm}_phylmd_${rad}_seq.e ; fi |
|---|
| 480 | echo ce0l suffix = $suffix |
|---|
| 481 | |
|---|
| 482 | if [ -f $modipsl/modeles/LMDZ/bin/ce0l${suffix} ] ; then |
|---|
| 483 | mv $modipsl/modeles/LMDZ/bin/ce0l${suffix} $modipsl/bin/ce0l_${resol_atm}_${optmode}.e |
|---|
| 484 | else |
|---|
| 485 | echo "ERROR ce0l${suffix} executable does not exist." |
|---|
| 486 | echo "THERE IS A PROBLEM IN CE0L (LMDZ) REGULAR LATLON COMPILATION - STOP" |
|---|
| 487 | exit |
|---|
| 488 | fi |
|---|
| 489 | fi |
|---|
| 490 | |
|---|
| 491 | echo >>$outfile ; echo "ALL COMPILING FINISHED" >> $outfile |
|---|
| 492 | echo ls -lrt modipsl/bin >> $outfile |
|---|
| 493 | ls -lrt $modipsl/bin >> $outfile |
|---|
| 494 | |
|---|
| 495 | echo; echo "ALL COMPILING FINISHED" ; echo |
|---|
| 496 | echo "Executables are found in modipsl/bin" |
|---|
| 497 | echo "Check that executable names correspond with the name set in config.card before launching the job" |
|---|
| 498 | echo ls -lrt modipsl/bin |
|---|
| 499 | ls -lrt $modipsl/bin |
|---|
| 500 | |
|---|
| 501 | date |
|---|
| 502 | |
|---|
| 503 | exit |
|---|
| 504 | |
|---|
| 505 | |
|---|
