source: CONFIG/UNIFORM/v6/IPSLCM6.5/GENERAL/DRIVER/inca.driver @ 5066

Last change on this file since 5066 was 5066, checked in by cetlod, 4 years ago

First step towards IPSLCM6.5 with the use of NEMOv4 model
File size: 21.4 KB
Line 
1#!/bin/ksh
2
3#D- Driver du script pour INCA
4#-----------------------------------------------------------------
5function INCA_sed_replace
6{
7    IGCM_debug_PushStack "INCA_sed_replace"
8
9    sed -e "s/${2}/${3}/" ${1} > ${1}.tmp
10    RET=$?
11    echo "INCA_sed : ${1} ${2} ${3}"
12    \mv ${1}.tmp ${1}
13
14    IGCM_debug_PopStack "INCA_sed_replace"
15    return $RET
16}
17#-----------------------------------------------------------------
18function CHM_Initialize
19{
20    IGCM_debug_PushStack "CHM_Initialize"
21
22    if [ X$ResolAtm != X ] ; then
23        # ResolAtm is set in config.card
24        RESOL_ATM_3D=${ResolAtm}
25        RESOL_ATM_Z=$( echo ${RESOL_ATM_3D} | awk "-Fx" '{print $3}' )
26        RESOL_ATM_X=$( echo ${RESOL_ATM_3D} | awk "-Fx" '{print $1}' )
27        RESOL_ATM_Y=$( echo ${RESOL_ATM_3D} | awk "-Fx" '{print $2}' )
28
29        RESOL_CHM=${RESOL_ATM_X}${RESOL_ATM_Y}-L${RESOL_ATM_Z}
30    elif [ -f ${SUBMIT_DIR}/../.resol ] ; then
31        [ -f ${SUBMIT_DIR}/../.resol ] && eval $(grep RESOL_ATM_3D ${SUBMIT_DIR}/../.resol) || RESOL_ATM_3D=96x95x19
32        RESOL_CHM_Z=$( echo ${RESOL_ATM_3D} | awk "-Fx" '{print $3}' | awk "-F-" '{print $1}')
33    else
34        IGCM_debug_Exit "ResolAtm is not set in config.card and the .resol file does not exist."
35        IGCM_debug_Verif_Exit
36    fi
37
38    echo 'resol chimie', $RESOL_CHM
39    CHEM=${ConfChem}
40    echo "INCA Tag : LMDZ-INCA" ${config_UserChoices_TagName}
41
42    ##- LMDZ physics version
43    ##  Read LMDZ_Physics option in lmdz.card, if not present take default value AP (old physics)
44    if [ ! X${lmdz_UserChoices_LMDZ_Physics} = X ] ; then
45        LMDZ_Physics=${lmdz_UserChoices_LMDZ_Physics}
46    else
47        LMDZ_Physics=AP
48    fi
49    echo LMDZ physics version : ${LMDZ_Physics}
50
51
52
53
54    IGCM_debug_PopStack "CHM_Initialize"
55}
56
57#-----------------------------------------------------------------
58function CHM_Update
59{
60    IGCM_debug_PushStack "CHM_Update"
61
62    if [ X${inca_UserChoices_output_frequency_chem} = X ] || [ X${inca_UserChoices_output_frequency_chem} = XNONE ] ; then
63        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml chemistry enabled FALSE
64        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml chemistry name inca1d_chem
65        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml chemistry output_freq 1d
66       
67    else
68        if [ X${inca_UserChoices_output_frequency_chem} = X1d ] || [ X${inca_UserChoices_output_frequency_chem} = X1mo ] ; then
69            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml chemistry enabled TRUE
70            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml chemistry name inca${inca_UserChoices_output_frequency_chem}_chem
71            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml chemistry output_freq ${inca_UserChoices_output_frequency_chem}
72        else
73            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml chemistry enabled TRUE
74            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml chemistry name inca1d_chem
75            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml chemistry output_freq ${inca_UserChoices_output_frequency_chem}
76
77        fi
78    fi
79
80    if [ X${inca_UserChoices_output_frequency_emi} = X ] || [ X${inca_UserChoices_output_frequency_emi} = XNONE ] ; then
81        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml emissions enabled FALSE
82        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml emissions name inca1d_emi
83        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml emissions output_freq 1d
84       
85    else
86        if [ X${inca_UserChoices_output_frequency_emi} = X1d ] || [ X${inca_UserChoices_output_frequency_emi} = X1mo ] ; then
87            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml emissions enabled TRUE
88            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml emissions name inca${inca_UserChoices_output_frequency_emi}_emi
89            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml emissions output_freq ${inca_UserChoices_output_frequency_emi}
90        else
91            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml emissions enabled TRUE
92            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml emissions name inca1d_emi
93            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml emissions output_freq ${inca_UserChoices_output_frequency_emi}
94        fi
95    fi
96
97
98    if [ X${inca_UserChoices_output_frequency_species} = X ] || [ X${inca_UserChoices_output_frequency_species} = XNONE ] ; then
99        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml species enabled FALSE
100        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml species name inca1d_species
101        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml species output_freq 1d
102       
103    else
104        if [ X${inca_UserChoices_output_frequency_species} = X1d ] || [ X${inca_UserChoices_output_frequency_species} = X1mo ] ; then
105            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml species enabled TRUE
106            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml species name inca${inca_UserChoices_output_frequency_species}_species
107            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml species output_freq ${inca_UserChoices_output_frequency_species}
108        else
109            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml species enabled TRUE
110            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml species name inca1d_species
111            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml species output_freq ${inca_UserChoices_output_frequency_species}
112        fi
113    fi
114
115
116    if [ X${inca_UserChoices_output_frequency_forcage} = X ] || [ X${inca_UserChoices_output_frequency_forcage} = XNONE ] ; then
117        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml forcage enabled FALSE
118        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml forcage name inca1d_forcage
119        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml forcage output_freq 1d
120       
121    else
122        if [ X${inca_UserChoices_output_frequency_forcage} = X1d ] || [ X${inca_UserChoices_output_frequency_forcage} = X1mo ] ; then
123            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml forcage enabled TRUE
124            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml forcage name inca${inca_UserChoices_output_frequency_forcage}_forcage
125            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml forcage output_freq ${inca_UserChoices_output_frequency_forcage}
126        else
127            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml forcage enabled TRUE
128            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml forcage name inca1d_forcage
129            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml forcage output_freq ${inca_UserChoices_output_frequency_forcage}
130        fi
131    fi
132
133
134    if [ X${inca_UserChoices_output_frequency_aero} = X ] || [ X${inca_UserChoices_output_frequency_aero} = XNONE ] ; then
135        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero enabled FALSE
136        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero name inca1d_aero
137        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero output_freq 1d
138       
139    else
140        if [ X${inca_UserChoices_output_frequency_aero} = X1d ] || [ X${inca_UserChoices_output_frequency_aero} = X1mo ] ; then
141            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero enabled TRUE
142            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero name inca${inca_UserChoices_output_frequency_aero}_aero
143            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero output_freq ${inca_UserChoices_output_frequency_aero}
144        else
145            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero enabled TRUE
146            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero name inca1d_aero
147            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero output_freq ${inca_UserChoices_output_frequency_aero}
148        fi
149    fi
150
151
152    if [ X${inca_UserChoices_output_frequency_dep} = X ] || [ X${inca_UserChoices_output_frequency_dep} = XNONE ] ; then
153        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml dvel enabled FALSE
154        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml dvel name inca1d_dep
155        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml dvel output_freq 1d
156       
157    else
158        if [ X${inca_UserChoices_output_frequency_dep} = X1d ] || [ X${inca_UserChoices_output_frequency_dep} = X1mo ] ; then
159            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml dvel enabled TRUE
160            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml dvel name inca${inca_UserChoices_output_frequency_dep}_dep
161            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml dvel output_freq ${inca_UserChoices_output_frequency_dep}
162        else
163            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml dvel enabled TRUE
164            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml dvel name inca1d_dep
165            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml dvel output_freq ${inca_UserChoices_output_frequency_dep}
166        fi
167    fi
168
169    if [ X${inca_UserChoices_output_frequency_washrate} = X ] || [ X${inca_UserChoices_output_frequency_washrate} = XNONE ] ; then
170        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml washout enabled FALSE
171        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml washout name inca1d_washrate
172        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml washout output_freq 1d
173       
174    else
175        if [ X${inca_UserChoices_output_frequency_washrate} = X1d ] || [ X${inca_UserChoices_output_frequency_washrate} = X1mo ] ; then
176            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml washout enabled TRUE
177            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml washout name inca${inca_UserChoices_output_frequency_washrate}_washrate
178            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml washout output_freq ${inca_UserChoices_output_frequency_washrate}
179        else
180            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml washout enabled TRUE
181            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml washout name inca1d_washrate
182            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml washout output_freq ${inca_UserChoices_output_frequency_washrate}
183        fi
184    fi
185
186    if [ X${inca_UserChoices_output_frequency_veget} = X ] || [ X${inca_UserChoices_output_frequency_veget} = XNONE ] ; then
187        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml vegetation enabled FALSE
188        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml vegetation name inca1d_veget
189        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml vegetation output_freq 1d
190       
191    else
192        if [ X${inca_UserChoices_output_frequency_veget} = X1d ] || [ X${inca_UserChoices_output_frequency_veget} = X1mo ] ; then
193            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml vegetation enabled TRUE
194            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml vegetation name inca${inca_UserChoices_output_frequency_veget}_veget
195            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml vegetation output_freq ${inca_UserChoices_output_frequency_veget}
196        else
197            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml vegetation enabled TRUE
198            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml vegetation name inca1d_veget
199            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml vegetation output_freq ${inca_UserChoices_output_frequency_veget}
200        fi
201    fi
202
203
204    if [ X${inca_UserChoices_output_frequency_reacflux} = X ] || [ X${inca_UserChoices_output_frequency_reacflux} = XNONE ] ; then
205        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml reacflux enabled FALSE
206        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml reacflux name inca1d_reacflux
207        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml reacflux output_freq 1d
208       
209    else
210        if [ X${inca_UserChoices_output_frequency_reacflux} = X1d ] || [ X${inca_UserChoices_output_frequency_reacflux} = X1mo ] ; then
211            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml reacflux enabled TRUE
212            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml reacflux name inca${inca_UserChoices_output_frequency_reacflux}_reacflux
213            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml reacflux output_freq ${inca_UserChoices_output_frequency_reacflux}
214        else
215            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml reacflux enabled TRUE
216            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml reacflux name inca1d_reacflux
217            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml reacflux output_freq ${inca_UserChoices_output_frequency_reacflux}
218        fi
219    fi
220
221
222    if [ X${inca_UserChoices_output_frequency_phtrate} = X ] || [ X${inca_UserChoices_output_frequency_phtrate} = XNONE ] ; then
223        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml phtrate enabled FALSE
224        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml phtrate name inca1d_phtrate
225        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml phtrate output_freq 1d
226       
227    else
228        if [ X${inca_UserChoices_output_frequency_phtrate} = X1d ] || [ X${inca_UserChoices_output_frequency_phtrate} = X1mo ] ; then
229            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml phtrate enabled TRUE
230            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml phtrate name inca${inca_UserChoices_output_frequency_phtrate}_phtrate
231            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml phtrate output_freq ${inca_UserChoices_output_frequency_phtrate}
232        else
233            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml phtrate enabled TRUE
234            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml phtrate name inca1d_phtrate
235            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml phtrate output_freq ${inca_UserChoices_output_frequency_phtrate}
236        fi
237    fi
238
239    if [ X${inca_UserChoices_output_frequency_ges} = X ] || [ X${inca_UserChoices_output_frequency_ges} = XNONE ] ; then
240        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml ges enabled FALSE
241        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml ges name inca1d_ges
242        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml ges output_freq 1d
243       
244    else
245        if [ X${inca_UserChoices_output_frequency_ges} = X1d ] || [ X${inca_UserChoices_output_frequency_ges} = X1mo ] ; then
246            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml ges enabled TRUE
247            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml ges name inca${inca_UserChoices_output_frequency_ges}_ges
248            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml ges output_freq ${inca_UserChoices_output_frequency_ges}
249        else
250            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml ges enabled TRUE
251            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml ges name inca1d_ges
252            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml ges output_freq ${inca_UserChoices_output_frequency_ges}
253        fi
254    fi
255
256    if [ X${inca_UserChoices_output_frequency_invariants} = X ] || [ X${inca_UserChoices_output_frequency_invariants} = XNONE ] ; then
257        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml invariants enabled FALSE
258        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml invariants name inca1d_invariants
259        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml invariants output_freq 1d
260       
261    else
262        if [ X${inca_UserChoices_output_frequency_invariants} = X1d ] || [ X${inca_UserChoices_output_frequency_invariants} = X1mo ] ; then
263            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml invariants enabled TRUE
264            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml invariants name inca${inca_UserChoices_output_frequency_invariants}_invariants
265            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml invariants output_freq ${inca_UserChoices_output_frequency_invariants}
266        else
267            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml invariants enabled TRUE
268            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml invariants name inca1d_invariants
269            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml invariants output_freq ${inca_UserChoices_output_frequency_invariants}
270        fi
271    fi
272
273    if [ X${inca_UserChoices_output_frequency_aero_chem} = X ] || [ X${inca_UserChoices_output_frequency_aero_chem} = XNONE ] ; then
274        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero_chem enabled FALSE
275        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero_chem name inca1d_aero_chem
276        IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero_chem output_freq 1d
277       
278    else
279        if [ X${inca_UserChoices_output_frequency_aero_chem} = X1d ] || [ X${inca_UserChoices_output_frequency_aero_chem} = X1mo ] || [ X${inca_UserChoices_output_frequency_aero_chem} = X1ts ] ; then
280            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero_chem enabled TRUE
281            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero_chem name inca${inca_UserChoices_output_frequency_aero_chem}_aero_chem
282            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero_chem output_freq ${inca_UserChoices_output_frequency_aero_chem}
283        else
284            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero_chem enabled TRUE
285            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero_chem name inca1ts_aero_chem
286            IGCM_comp_modifyXmlFile nonblocker file_def_inca.xml aero_chem output_freq ${inca_UserChoices_output_frequency_aero_chem}
287        fi
288    fi
289
290    case ${CHEM} in
291        AER)
292
293            if [ X${LMDZ_Physics} = X"AP" ] ; then
294                IGCM_comp_modifyDefFile nonblocker run.def config_inca aero
295            else
296                IGCM_comp_modifyDefFile nonblocker run.def config_inca aeNP
297            fi
298        ;;
299        DUSS)
300
301            if [ X${LMDZ_Physics} = X"AP" ] ; then
302                IGCM_comp_modifyDefFile nonblocker run.def config_inca aero
303            else
304                IGCM_comp_modifyDefFile nonblocker run.def config_inca aeNP
305            fi
306        ;;
307        NMHC) 
308
309            IGCM_comp_modifyDefFile nonblocker run.def config_inca chem
310            ;;
311        NMHC_AER)
312
313            if [ X${LMDZ_Physics} = X"AP" ] ; then
314                IGCM_comp_modifyDefFile nonblocker run.def config_inca aero
315            else
316                IGCM_comp_modifyDefFile nonblocker run.def config_inca aeNP
317            fi
318        ;;
319
320        NMHC_AER_S)
321
322            if [ X${LMDZ_Physics} = X"AP" ] ; then
323                IGCM_comp_modifyDefFile nonblocker run.def config_inca aero
324            else
325                IGCM_comp_modifyDefFile nonblocker run.def config_inca aeNP
326            fi
327        ;;
328        GES)
329
330            IGCM_comp_modifyDefFile nonblocker run.def config_inca chem
331        esac
332
333
334    # inca.def : Activate reading of 10m wind in files if LMDZ_10m_winds=n in inca.card
335    if [ ! X${inca_UserChoices_LMDZ_10m_winds} = X ] ; then
336        IGCM_comp_modifyDefFile nonblocker inca.def LMDZ_10m_winds  ${inca_UserChoices_LMDZ_10m_winds}
337    else
338        IGCM_comp_modifyDefFile nonblocker inca.def LMDZ_10m_winds  n
339    fi
340
341
342    if [ ! X${inca_UserChoices_wind_parameter} = X ] ; then
343        IGCM_comp_modifyDefFile nonblocker inca.def  tref ${inca_UserChoices_wind_parameter}
344    else
345        IGCM_comp_modifyDefFile nonblocker inca.def  tref DEFAULT
346    fi
347
348    if [  X${inca_UserChoices_seasalt_corr} = X ] ; then
349    IGCM_comp_modifyDefFile nonblocker inca.def  ss_corr  DEFAULT
350    else
351    IGCM_comp_modifyDefFile nonblocker inca.def  ss_corr ${inca_UserChoices_seasalt_corr}
352    fi
353
354
355
356    # inca.def : choose write frequency for inca_avgr in inca.card
357    if [ ! X${inca_UserChoices_freq_write_chem} = X ] ; then
358        IGCM_comp_modifyDefFile nonblocker inca.def freq_write_chem  ${inca_UserChoices_freq_write_chem}
359    else
360        IGCM_comp_modifyDefFile nonblocker inca.def  freq_write_chem  86400
361    fi
362
363    #inca.def : choose aerosol effect with feedback variable
364    if [ ! X${inca_UserChoices_feedb} = X ] ; then
365        IGCM_comp_modifyDefFile nonblocker inca.def  feedb  ${inca_UserChoices_feedb}
366    else
367        IGCM_comp_modifyDefFile nonblocker inca.def feedb  0
368    fi
369   
370    #inca.def : choose coupled model with orchidee 
371    if [ ! X${inca_UserChoices_CoupOrchInca} = X ]; then
372        IGCM_comp_modifyDefFile nonblocker inca.def CoupOrchInca ${inca_UserChoices_CoupOrchInca}
373    else
374        IGCM_comp_modifyDefFile nonblocker inca.def CoupOrchInca n
375    fi
376
377    #inca.def : choose sedimentation schema
378    if [ ! X${inca_UserChoices_multilayer_sedim} = X ]; then
379        IGCM_comp_modifyDefFile nonblocker inca.def multilayer_sediment ${inca_UserChoices_multilayer_sedim}
380    else
381        IGCM_comp_modifyDefFile nonblocker inca.def multilayer_sediment y
382    fi
383
384    #inca.def : choose calcul interactif des diagnostiques flux chimique ou non 
385    if [ ! X${inca_UserChoices_calcul_flux} = X ]; then
386        IGCM_comp_modifyDefFile nonblocker inca.def calcul_flux ${inca_UserChoices_calcul_flux}
387    else
388        IGCM_comp_modifyDefFile nonblocker inca.def calcul_flux n
389    fi
390
391    #inca.def : choose aircraft emission
392    if [ ! X${inca_UserChoices_flag_plane} = X ]; then
393        IGCM_comp_modifyDefFile nonblocker inca.def flag_plane ${inca_UserChoices_flag_plane}
394    else
395        IGCM_comp_modifyDefFile nonblocker inca.def flag_plane 0
396    fi
397   
398    #inca.def : choose time interpolation for sflx.nc
399    if [ ! X${inca_UserChoices_emi_interp_time} = X ]; then
400        IGCM_comp_modifyDefFile nonblocker inca.def emi_interp_time ${inca_UserChoices_emi_interp_time}
401    else
402        IGCM_comp_modifyDefFile nonblocker inca.def emi_interp_time 1
403    fi
404
405
406
407    #inca.def : choose which xml will be use (with group or no = cmip files)
408    if [ X${inca_UserChoices_cmip_xml} = Xy ] ; then
409       
410        IGCM_comp_modifyDefFile nonblocker inca.def  cmip_xml  y
411    else
412        IGCM_comp_modifyDefFile nonblocker inca.def  cmip_xml  n
413    fi
414       
415
416
417    # Add include of INCA context in iodef.xml
418    # In iodef.xml add on next line after "COMPONENT CONTEXT"
419    #  <context id="inca" src="./context_inca.xml"/>
420    echo '<context id="inca" src="./context_inca.xml"/>' > add.tmp
421    cp iodef.xml iodef.xml.tmp
422    sed -e "/COMPONENT CONTEXT/r add.tmp" \
423        iodef.xml.tmp > iodef.xml
424    rm iodef.xml.tmp add.tmp
425
426
427    # Add LongName as global attribute in XIOS output files (if LongName is not empty)
428    if [ ! "X${config_UserChoices_LongName}" = "X" ] ; then
429        listfile=$(ls file_def*inca.xml)
430        echo "<variable id=\"LongName\" type=\"string\">${config_UserChoices_LongName}</variable>" > add.tmp
431        for file in ${listfile}
432        do
433            cp ${file} ${file}.tmp
434            sed -e "/<file id/r add.tmp" \
435                ${file}.tmp > ${file}
436            rm ${file}.tmp
437        done
438        rm add.tmp
439    fi
440
441    IGCM_debug_PopStack "CHM_Update"
442}
443
444#-----------------------------------------------------------------
445function CHM_Finalize
446{
447    IGCM_debug_PushStack "CHM_Finalize"
448
449    echo FINALIZE CHM !!!
450#
451#    IGCM_sys_Mkdir ${R_OUT_EXE}
452#    cd ${MODIPSL}
453#    tar cf src_${config_UserChoices_JobName}.tar  modeles
454#    IGCM_sys_Mv src_${config_UserChoices_JobName}.tar ${R_OUT_EXE}/.
455#    cd -
456#
457
458    IGCM_debug_PopStack "CHM_Finalize"
459}
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