Context Navigation

namelist_pisces_ORCA1_ref @ 2295

Last change on this file since 2295 was 2265, checked in by omamce, 10 years ago

O.M.

Add namelists for ORCA1 LIM2. No diurnal cycle presently.
Add namelists for ORCA1 LIM3 : still not working.

File size: 24.2 KB

Line
1	!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
2	!! PISCES (key_pisces) reference namelist (see below for key_pisces_reduced)
3	!! 1 - air-sea exchange (nampisext)
4	!! 2 - biological parameters (nampisbio)
5	!! 3 - parameters for nutrient limitations (nampislim)
6	!! 4 - parameters for phytoplankton (nampisprod,nampismort)
7	!! 5 - parameters for zooplankton (nampismes,nampiszoo)
8	!! 6 - parameters for remineralization (nampisrem)
9	!! 7 - parameters for calcite chemistry (nampiscal)
10	!! 8 - parameters for inputs deposition (nampissed)
11	!! 9 - parameters for Kriest parameterization (nampiskrp, nampiskrs)
12	!! 10 - additional 2D/3D diagnostics (nampisdia)
13	!! 11 - Damping (nampisdmp)
14	!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
15	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
16	&nampisext ! air-sea exchange
17	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
18	ln_co2int = .false. ! read atm pco2 from a file (T) or constant (F)
19	atcco2 = 280. ! Constant value atmospheric pCO2 - ln_co2int = F
20	clname = 'atcco2.txt' ! Name of atm pCO2 file - ln_co2int = T
21	nn_offset = 0 ! Offset model-data start year - ln_co2int = T
22	! ! If your model year is iyy, nn_offset=(years(1)-iyy)
23	! ! then the first atmospheric CO2 record read is at years(1)
24	/
25	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
26	&nampisatm ! Atmospheric prrssure
27	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
28	! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
29	! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
30	sn_patm = 'presatm' , -1 , 'patm' , .true. , .true. , 'yearly' , '' , '' , ''
31	cn_dir = './' ! root directory for the location of the dynamical files
32	!
33	ln_presatm = .false. ! constant atmopsheric pressure (F) or from a file (T)
34	/
35	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
36	&nampisbio ! biological parameters
37	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
38	nrdttrc = 1 ! time step frequency for biology
39	wsbio = 2. ! POC sinking speed
40	xkmort = 2.E-7 ! half saturation constant for mortality
41	ferat3 = 10.E-6 ! Fe/C in zooplankton
42	wsbio2 = 30. ! Big particles sinking speed
43	niter1max = 1 ! Maximum number of iterations for POC
44	niter2max = 1 ! Maximum number of iterations for GOC
45	/
46	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
47	&nampislim ! parameters for nutrient limitations
48	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
49	concnno3 = 1.e-6 ! Nitrate half saturation of nanophytoplankton
50	concdno3 = 3.E-6 ! Phosphate half saturation for diatoms
51	concnnh4 = 1.E-7 ! NH4 half saturation for phyto
52	concdnh4 = 3.E-7 ! NH4 half saturation for diatoms
53	concnfer = 1.E-9 ! Iron half saturation for phyto
54	concdfer = 3.E-9 ! Iron half saturation for diatoms
55	concbfe = 1.E-11 ! Half-saturation for Fe limitation of Bacteria
56	concbnh4 = 2.E-8 ! NH4 half saturation for phyto
57	concbno3 = 2.E-7 ! Phosphate half saturation for diatoms
58	xsizedia = 1.E-6 ! Minimum size criteria for diatoms
59	xsizephy = 1.E-6 ! Minimum size criteria for phyto
60	xsizern = 3.0 ! Size ratio for nanophytoplankton
61	xsizerd = 3.0 ! Size ratio for diatoms
62	xksi1 = 2.E-6 ! half saturation constant for Si uptake
63	xksi2 = 20E-6 ! half saturation constant for Si/C
64	xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization
65	qnfelim = 7.E-6 ! Optimal quota of phyto
66	qdfelim = 7.E-6 ! Optimal quota of diatoms
67	caco3r = 0.3 ! mean rain ratio
68	/
69	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
70	&nampisopt ! parameters for optics
71	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
72	! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
73	! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
74	sn_par = 'par.orca' , 24 , 'fr_par' , .true. , .true. , 'yearly' , '' , '' , ''
75	cn_dir = './' ! root directory for the location of the dynamical files
76	ln_varpar = .true. ! boolean for PAR variable
77	parlux = 0.43 ! Fraction of shortwave as PAR
78	/
79	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
80	&nampisprod ! parameters for phytoplankton growth
81	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
82	pislope = 2. ! P-I slope
83	pislope2 = 2. ! P-I slope for diatoms
84	xadap = 0. ! Adaptation factor to low light
85	excret = 0.05 ! excretion ratio of phytoplankton
86	excret2 = 0.05 ! excretion ratio of diatoms
87	ln_newprod = .true. ! Enable new parame. of production (T/F)
88	bresp = 0.00333 ! Basal respiration rate
89	chlcnm = 0.033 ! Minimum Chl/C in nanophytoplankton
90	chlcdm = 0.05 ! Minimum Chl/C in diatoms
91	chlcmin = 0.004 ! Maximum Chl/c in phytoplankton
92	fecnm = 40E-6 ! Maximum Fe/C in nanophytoplankton
93	fecdm = 40E-6 ! Minimum Fe/C in diatoms
94	grosip = 0.159 ! mean Si/C ratio
95	/
96	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
97	&nampismort ! parameters for phytoplankton sinks
98	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
99	wchl = 0.01 ! quadratic mortality of phytoplankton
100	wchld = 0.01 ! maximum quadratic mortality of diatoms
101	wchldm = 0.03 ! maximum quadratic mortality of diatoms
102	mprat = 0.01 ! phytoplankton mortality rate
103	mprat2 = 0.01 ! Diatoms mortality rate
104	/
105	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
106	&nampismes ! parameters for mesozooplankton
107	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
108	part2 = 0.75 ! part of calcite not dissolved in mesozoo guts
109	grazrat2 = 0.75 ! maximal mesozoo grazing rate
110	resrat2 = 0.005 ! exsudation rate of mesozooplankton
111	mzrat2 = 0.03 ! mesozooplankton mortality rate
112	xprefc = 1. ! zoo preference for phyto
113	xprefp = 0.3 ! zoo preference for POC
114	xprefz = 1. ! zoo preference for zoo
115	xprefpoc = 0.3 ! zoo preference for poc
116	xthresh2zoo = 1E-8 ! zoo feeding threshold for mesozooplankton
117	xthresh2dia = 1E-8 ! diatoms feeding threshold for mesozooplankton
118	xthresh2phy = 1E-8 ! nanophyto feeding threshold for mesozooplankton
119	xthresh2poc = 1E-8 ! poc feeding threshold for mesozooplankton
120	xthresh2 = 3E-7 ! Food threshold for grazing
121	xkgraz2 = 20.E-6 ! half sturation constant for meso grazing
122	epsher2 = 0.35 ! Efficicency of Mesozoo growth
123	sigma2 = 0.6 ! Fraction of mesozoo excretion as DOM
124	unass2 = 0.3 ! non assimilated fraction of P by mesozoo
125	grazflux = 2.e3 ! flux-feeding rate
126	/
127	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
128	&nampiszoo ! parameters for microzooplankton
129	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
130	part = 0.5 ! part of calcite not dissolved in microzoo gutsa
131	grazrat = 3.0 ! maximal zoo grazing rate
132	resrat = 0.03 ! exsudation rate of zooplankton
133	mzrat = 0.004 ! zooplankton mortality rate
134	xpref2c = 0.1 ! Microzoo preference for POM
135	xpref2p = 1. ! Microzoo preference for Nanophyto
136	xpref2d = 0.5 ! Microzoo preference for Diatoms
137	xthreshdia = 1.E-8 ! Diatoms feeding threshold for microzooplankton
138	xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton
139	xthreshpoc = 1.E-8 ! POC feeding threshold for microzooplankton
140	xthresh = 3.E-7 ! Food threshold for feeding
141	xkgraz = 20.E-6 ! half sturation constant for grazing
142	epsher = 0.3 ! Efficiency of microzoo growth
143	sigma1 = 0.6 ! Fraction of microzoo excretion as DOM
144	unass = 0.3 ! non assimilated fraction of phyto by zoo
145	/
146	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
147	&nampisfer ! parameters for iron chemistry
148	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
149	ln_fechem = .false. ! complex iron chemistry ( T/F )
150	ln_ligvar = .false. ! variable ligand concentration
151	xlam1 = 0.005 ! scavenging rate of Iron
152	xlamdust = 150.0 ! Scavenging rate of dust
153	ligand = 0.6E-9 ! Ligands concentration
154	/
155	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
156	&nampisrem ! parameters for remineralization
157	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
158	xremik = 0.35 ! remineralization rate of DOC
159	xremip = 0.025 ! remineralisation rate of POC
160	nitrif = 0.05 ! NH4 nitrification rate
161	xsirem = 0.003 ! remineralization rate of Si
162	xsiremlab = 0.03 ! fast remineralization rate of Si
163	xsilab = 0.5 ! Fraction of labile biogenic silica
164	oxymin = 1.E-6 ! Half-saturation constant for anoxia
165	/
166	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
167	&nampiscal ! parameters for Calcite chemistry
168	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
169	kdca = 6. ! calcite dissolution rate constant (1/time)
170	nca = 1. ! order of dissolution reaction (dimensionless)
171	/
172	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
173	&nampissbc ! parameters for inputs deposition
174	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
175	! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
176	! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
177	sn_dust = 'dust.orca' , -1 , 'dust' , .true. , .true. , 'yearly' , '' , '' , ''
178	sn_solub = 'solubility.orca' , -12 , 'solubility1' , .false. , .true. , 'yearly' , '' , '' , ''
179	sn_riverdic = 'river.orca' , 120 , 'riverdic' , .true. , .true. , 'yearly' , '' , '' , ''
180	sn_riverdoc = 'river.orca' , 120 , 'riverdoc' , .true. , .true. , 'yearly' , '' , '' , ''
181	sn_riverdin = 'river.orca' , 120 , 'riverdin' , .true. , .true. , 'yearly' , '' , '' , ''
182	sn_riverdon = 'river.orca' , 120 , 'riverdon' , .true. , .true. , 'yearly' , '' , '' , ''
183	sn_riverdip = 'river.orca' , 120 , 'riverdip' , .true. , .true. , 'yearly' , '' , '' , ''
184	sn_riverdop = 'river.orca' , 120 , 'riverdop' , .true. , .true. , 'yearly' , '' , '' , ''
185	sn_riverdsi = 'river.orca' , 120 , 'riverdsi' , .true. , .true. , 'yearly' , '' , '' , ''
186	sn_ndepo = 'ndeposition.orca', -12 , 'ndep' , .false. , .true. , 'yearly' , '' , '' , ''
187	sn_ironsed = 'bathy.orca' , -12 , 'bathy' , .false. , .true. , 'yearly' , '' , '' , ''
188	sn_hydrofe = 'hydrofe.orca' , -12 , 'epsdb' , .false. , .true. , 'yearly' , '' , '' , ''
189	!
190	cn_dir = './' ! root directory for the location of the dynamical files
191	ln_dust = .true. ! boolean for dust input from the atmosphere
192	ln_solub = .true. ! boolean for variable solubility of atm. Iron
193	ln_river = .true. ! boolean for river input of nutrients
194	ln_ndepo = .true. ! boolean for atmospheric deposition of N
195	ln_ironsed = .true. ! boolean for Fe input from sediments
196	ln_ironice = .true. ! boolean for Fe input from sea ice
197	ln_hydrofe = .false. ! boolean for from hydrothermal vents
198	sedfeinput = 2.e-9 ! Coastal release of Iron
199	dustsolub = 0.02 ! Solubility of the dusta
200	mfrac = 0.035 ! Fe mineral fraction of dust
201	wdust = 2.0 ! Dust sinking speed
202	icefeinput = 15.e-9 ! Iron concentration in sea ice
203	nitrfix = 1.e-7 ! Nitrogen fixation rate
204	diazolight = 50. ! Diazotrophs sensitivity to light (W/m2)
205	concfediaz = 1.e-10 ! Diazotrophs half-saturation Cste for Iron
206	hratio = 1.e+7 ! Fe to 3He ratio assumed for vent iron supply
207	/
208	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
209	&nampiskrp ! Kriest parameterization : parameters "key_kriest"
210	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
211	xkr_eta = 1.17 ! Sinking exponent
212	xkr_zeta = 2.28 ! N content exponent
213	xkr_ncontent = 5.7E-6 ! N content factor
214	xkr_mass_min = 0.0002 ! Minimum mass for Aggregates
215	xkr_mass_max = 1. ! Maximum mass for Aggregates
216	/
217	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
218	&nampiskrs ! Kriest parameterization : size classes "key_kriest"
219	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
220	xkr_sfact = 942. ! Sinking factor
221	xkr_stick = 0.5 ! Stickiness
222	xkr_nnano = 2.337 ! Nbr of cell in nano size class
223	xkr_ndiat = 3.718 ! Nbr of cell in diatoms size class
224	xkr_nmeso = 7.147 ! Nbr of cell in mesozoo size class
225	xkr_naggr = 9.877 ! Nbr of cell in aggregates size class
226	/
227	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
228	&nampisdia ! additional 2D/3D tracers diagnostics
229	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
230	! ! name ! title of the field ! units !
231	! ! ! ! !
232	pisdia2d(1) = 'Cflx ' , 'DIC flux ', 'molC/m2/s '
233	pisdia2d(2) = 'Oflx ' , 'Oxygen flux ', 'molC/m2/s '
234	pisdia2d(3) = 'Kg ' , 'Gas transfer ', 'mol/m2/s/uatm'
235	pisdia2d(4) = 'Delc ' , 'Delta CO2 ', 'uatm '
236	pisdia2d(5) = 'PMO ' , 'POC export ', 'molC/m2/s '
237	pisdia2d(6) = 'PMO2 ' , 'GOC export ', 'molC/m2/s '
238	pisdia2d(7) = 'ExpFe1 ' , 'Nano iron export ', 'molFe/m2/s '
239	pisdia2d(8) = 'ExpFe2 ' , 'Diatoms iron export ', 'molFe/m2/s '
240	pisdia2d(9) = 'ExpSi ' , 'Silicate export ', 'molSi/m2/s '
241	pisdia2d(10) = 'ExpCaCO3 ' , 'Calcite export ', 'molC/m2/s '
242	pisdia2d(11) = 'heup ' , 'euphotic layer depth ', 'm '
243	pisdia2d(12) = 'Fedep ' , 'Iron dep ', 'molFe/m2/s '
244	pisdia2d(13) = 'Nfix ' , 'Nitrogen Fixation ', 'molN/m2/s '
245	pisdia3d(1) = 'PH ' , 'PH ', '- '
246	pisdia3d(2) = 'CO3 ' , 'Bicarbonates ', 'mol/l '
247	pisdia3d(3) = 'CO3sat ' , 'CO3 saturation ', 'mol/l '
248	pisdia3d(4) = 'PAR ' , 'light penetration ', 'W/m2 '
249	pisdia3d(5) = 'PPPHY ' , 'Primary production of nanophyto ', 'molC/m3/s '
250	pisdia3d(6) = 'PPPHY2 ' , 'Primary production of diatoms ', 'molC/m3/s '
251	pisdia3d(7) = 'PPNEWN ' , 'New Primary production of nano ', 'molC/m3/s '
252	pisdia3d(8) = 'PPNEWD ' , 'New Primary production of diat ', 'molC/m3/s '
253	pisdia3d(9) = 'PBSi ' , 'Primary production of Si diatoms ', 'molSi/m3/s '
254	pisdia3d(10) = 'PFeN ' , 'Primary production of nano iron ', 'molFe/m3/s '
255	pisdia3d(11) = 'PFeD ' , 'Primary production of diatoms iron', 'molFe/m3/s '
256	/
257	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
258	&nampisdmp ! Damping
259	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
260	ln_pisdmp = .true. ! Relaxation fo some tracers to a mean value
261	nn_pisdmp = 5475 ! Frequency of Relaxation
262	/
263	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
264	&nampismass ! Mass conservation
265	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
266	ln_check_mass = .false. ! Check mass conservation
267	/
268	!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
269	!! PISCES reduced (key_pisces_reduced, ex LOBSTER) : namelists
270	!! 1 - biological parameters for phytoplankton (namlobphy)
271	!! 2 - biological parameters for nutrients (namlobnut)
272	!! 3 - biological parameters for zooplankton (namlobzoo)
273	!! 4 - biological parameters for detritus (namlobdet)
274	!! 5 - biological parameters for DOM (namlobdom)
275	!! 6 - parameters from aphotic layers to sediment (namlobsed)
276	!! 7 - general coefficients (namlobrat)
277	!! 8 - optical parameters (namlobopt)
278
279	!! 10 - biological diagnostics trends (namlobdbi)
280	!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
281	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
282	&namlobphy ! biological parameters for phytoplankton
283	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
284	tmumax = 1.21e-5 ! maximal phytoplankton growth rate [s-1]
285	rgamma = 0.05 ! phytoplankton exudation fraction [%]
286	fphylab = 0.75 ! NH4 fraction of phytoplankton exsudation
287	tmminp = 5.8e-7 ! minimal phytoplancton mortality rate [0.05/86400 s-1=20 days]
288	aki = 33. ! light photosynthesis half saturation constant[W/m2]
289	/
290	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
291	&namlobnut ! biological parameters for nutrients
292	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
293	akno3 = 0.7 ! nitrate limitation half-saturation value [mmol/m3]
294	aknh4 = 0.001 ! ammonium limitation half-saturation value [mmol/m3]
295	taunn = 5.80e-7 ! nitrification rate [s-1]
296	psinut = 3. ! inhibition of nitrate uptake by ammonium
297	/
298	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
299	&namlobzoo ! biological parameters for zooplankton
300	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
301	rppz = 0.8 ! zooplankton nominal preference for phytoplancton food [%]
302	taus = 9.26E-6 ! specific zooplankton maximal grazing rate [s-1]
303	! ! 0.75/86400 s-1=8.680555E-6 1/86400 = 1.15e-5
304	aks = 1. ! half-saturation constant for total zooplankton grazing [mmolN.m-3]
305	rpnaz = 0.3 ! non-assimilated phytoplankton by zooplancton [%]
306	rdnaz = 0.3 ! non-assimilated detritus by zooplankton [%]
307	tauzn = 8.1e-7 ! zooplancton specific excretion rate [0.1/86400 s-1=10 days]
308	fzoolab = 0.5 ! NH4 fraction of zooplankton excretion
309	fdbod = 0.5 ! zooplankton mortality fraction that goes to detritus
310	tmminz = 2.31e-6 ! minimal zooplankton mortality rate [(mmolN/m3)-1 d-1]
311	/
312	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
313	&namlobdet ! biological parameters for detritus
314	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
315	taudn = 5.80e-7 ! detritus breakdown rate [0.1/86400 s-1=10 days]
316	fdetlab = 0. ! NH4 fraction of detritus dissolution
317	/
318	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
319	&namlobdom ! biological parameters for DOM
320	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
321	taudomn = 6.43e-8 ! DOM breakdown rate [s-1]
322	! ! slow remineralization rate of semi-labile dom to nh4 (1 month)
323	/
324	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
325	&namlobsed ! parameters from aphotic layers to sediment
326	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
327	sedlam = 3.86e-7 ! time coefficient of POC remineralization in sediments [s-1]
328	sedlostpoc = 0. ! mass of POC lost in sediments
329	vsed = 3.47e-5 ! detritus sedimentation speed [m/s]
330	xhr = -0.858 ! coeff for martin''s remineralisation profile
331	/
332	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
333	&namlobrat ! general coefficients
334	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
335	rcchl = 60. ! Carbone/Chlorophyl ratio [mgC.mgChla-1]
336	redf = 6.56 ! redfield ratio (C:N) for phyto
337	reddom = 6.56 ! redfield ratio (C:N) for DOM
338	/
339	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
340	&namlobopt ! optical parameters
341	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
342	xkg0 = 0.0232 ! green absorption coefficient of water
343	xkr0 = 0.225 ! red absorption coefficent of water
344	xkgp = 0.074 ! green absorption coefficient of chl
345	xkrp = 0.037 ! red absorption coefficient of chl
346	xlg = 0.674 ! green chl exposant for absorption
347	xlr = 0.629 ! red chl exposant for absorption
348	rpig = 0.7 ! chla/chla+pheo ratio
349	/
350	!'''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''
351	&nampisdbi ! biological diagnostics trends
352	!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
353	! ! 2D bio diagnostics units : mmole/m2/s ("key_trdmld_trc")
354	! ! name ! title of the field ! units !
355	pisdiabio(1) = 'NO3PHY' , 'Flux from NO3 to PHY ', 'mmole/m3/s'
356	pisdiabio(2) = 'NH4PHY' , 'Flux from NH4 to PHY ', 'mmole/m3/s'
357	pisdiabio(3) = 'PHYNH4' , 'Flux from PHY to NH4 ', 'mmole/m3/s'
358	pisdiabio(4) = 'PHYDOM' , 'Flux from PHY to DOM ', 'mmole/m3/s'
359	pisdiabio(5) = 'PHYZOO' , 'Flux from PHY to ZOO ', 'mmole/m3/s'
360	pisdiabio(6) = 'PHYDET' , 'Flux from PHY to DET ', 'mmole/m3/s'
361	pisdiabio(7) = 'DETZOO' , 'Flux from DET to ZOO ', 'mmole/m3/s'
362	pisdiabio(8) = 'DETSED' , 'Flux from DET to SED ', 'mmole/m3/s'
363	pisdiabio(9) = 'ZOODET' , 'Flux from ZOO to DET ', 'mmole/m3/s'
364	pisdiabio(10) = 'ZOOBOD' , 'Zooplankton closure ', 'mmole/m3/s'
365	pisdiabio(11) = 'ZOONH4' , 'Flux from ZOO to NH4 ', 'mmole/m3/s'
366	pisdiabio(12) = 'ZOODOM' , 'Flux from ZOO to DOM ', 'mmole/m3/s'
367	pisdiabio(13) = 'NH4NO3' , 'Flux from NH4 to NO3 ', 'mmole/m3/s'
368	pisdiabio(14) = 'DOMNH4' , 'Flux from DOM to NH4 ', 'mmole/m3/s'
369	pisdiabio(15) = 'DETNH4' , 'Flux from DET to NH4 ', 'mmole/m3/s'
370	pisdiabio(16) = 'DETDOM' , 'Flux from DET to DOM ', 'mmole/m3/s'
371	pisdiabio(17) = 'SEDNO3' , 'NO3 remineralization from SED', 'mmole/m3/s'
372	/

Note: See TracBrowser for help on using the repository browser.

Download in other formats:

Original Format