source: CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/file_def_nemo-pisces.xml @ 3758

Last change on this file since 3758 was 3758, checked in by acosce, 3 years ago

update IPSLESM6 to be consistent with CM6.1 (rev 3744)
+ add two flag in lmdz.card to drive iflag_phytrac and ok_bug_cv_trac (mandatory for AER configuration)

File size: 18.4 KB
Line 
1    <!-- $id$ -->
2   
3    <!--
4
5============================================================================================================
6=                                           output files definition                                        =
7=                                            Define your own files ocean biogeochemistry                                         =
8=                                         put the variables you want...                                    =
9============================================================================================================
10    -->
11   
12    <file_definition type="one_file" name="@expname@_@freq@" sync_freq="1d" min_digits="4" compression_level="0" >
13   
14      <file_group id="1ts_pis" output_freq="1ts"  output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
15
16      <file_group id="1h_pis" output_freq="1h"  output_level="10" enabled=".TRUE."/> <!-- 1h files -->
17
18      <file_group id="2h_pis" output_freq="2h"  output_level="10" enabled=".TRUE."/> <!-- 2h files -->
19
20      <file_group id="3h_pis" output_freq="3h"  output_level="10" enabled=".TRUE."/> <!-- 3h files -->     
21
22      <file_group id="4h_pis" output_freq="4h"  output_level="10" enabled=".TRUE."/> <!-- 4h files -->
23
24      <file_group id="6h_pis" output_freq="6h"  output_level="10" enabled=".TRUE."/> <!-- 6h files -->     
25   
26      <file_group id="1d_pis" output_freq="1d"  output_level="_AUTO_" enabled="_AUTO_" >  <!-- 1d files -->   
27
28        <file id="file17" name_suffix="_bioscalar" description="pisces sms variables" >
29          <field field_ref="tdenit"   name="tdenit"   grid_ref="grid_1point" unit="TgN/yr" operation="instant" level="2" > tdenit * 14. * 86400. * 365. / 1e12 </field>
30          <field field_ref="tnfix"    name="tnfix"    grid_ref="grid_1point" unit="TgN/yr" operation="instant" level="2" > tnfix * 14. * 86400. * 365. / 1e12 </field>
31          <field field_ref="tcflx"    name="tcflx"    grid_ref="grid_1point" unit="PgC/yr" operation="instant" level="2" > tcflx * -1. * 12. * 86400. * 365. / 1e15 </field>
32          <field field_ref="tcflxcum" name="tcflxcum" grid_ref="grid_1point" unit="PgC"    operation="instant" level="2" > tcflxcum * -1. * 12. / 1e15 </field>
33          <field field_ref="tcexp"    name="tcexp"    grid_ref="grid_1point" unit="PgC/yr" operation="instant" level="2" > tcexp * 12. * 86400. * 365. / 1e15 </field>
34          <field field_ref="tintpp"   name="tintpp"   grid_ref="grid_1point" unit="PgC/yr" operation="instant" level="2" > tintpp * 12. * 86400. * 365. / 1e15 </field>
35          <field field_ref="pno3tot"  name="pno3tot"  grid_ref="grid_1point" unit="umolN"  operation="instant" level="2" > pno3tot * 16. / 122. * 1e6 </field>
36          <field field_ref="ppo4tot"  name="ppo4tot"  grid_ref="grid_1point" unit="umolP"  operation="instant" level="2" > ppo4tot * 1. / 122. * 1e6 </field>
37          <field field_ref="psiltot"  name="psiltot"  grid_ref="grid_1point" unit="umolC"  operation="instant" level="2" > psiltot * 1e6  </field>
38          <field field_ref="palktot"  name="palktot"  grid_ref="grid_1point" unit="umolC"  operation="instant" level="2" > palktot * 1e6  </field>
39          <field field_ref="pfertot"  name="pfertot"  grid_ref="grid_1point" unit="nmolFe" operation="instant" level="2" > pfertot * 1e9  </field>
40        </file>
41
42      </file_group> 
43
44      <file_group id="5d_pis" output_freq="5d"  output_level="_AUTO_" enabled="_AUTO_" >  <!-- 5d files -->   
45
46       <file id="file24" name_suffix="_bioscalar" description="pisces sms variables" >
47          <field field_ref="tdenit"   name="tdenit"   grid_ref="grid_1point" unit="TgN/yr" operation="instant" level="2" > tdenit * 14. * 86400. * 365. / 1e12 </field>
48          <field field_ref="tnfix"    name="tnfix"    grid_ref="grid_1point" unit="TgN/yr" operation="instant" level="2" > tnfix * 14. * 86400. * 365. / 1e12 </field>
49          <field field_ref="tcflx"    name="tcflx"    grid_ref="grid_1point" unit="PgC/yr" operation="instant" level="2" > tcflx * -1. * 12. * 86400. * 365. / 1e15 </field>
50          <field field_ref="tcflxcum" name="tcflxcum" grid_ref="grid_1point" unit="PgC"    operation="instant" level="2" > tcflxcum * -1. * 12. / 1e15 </field>
51          <field field_ref="tcexp"    name="tcexp"    grid_ref="grid_1point" unit="PgC/yr" operation="instant" level="2" > tcexp * 12. * 86400. * 365. / 1e15 </field>
52          <field field_ref="tintpp"   name="tintpp"   grid_ref="grid_1point" unit="PgC/yr" operation="instant" level="2" > tintpp * 12. * 86400. * 365. / 1e15 </field>
53          <field field_ref="pno3tot"  name="pno3tot"  grid_ref="grid_1point" unit="umolN"  operation="instant" level="2" > pno3tot * 16. / 122. * 1e6 </field>
54          <field field_ref="ppo4tot"  name="ppo4tot"  grid_ref="grid_1point" unit="umolP"  operation="instant" level="2" > ppo4tot * 1. / 122. * 1e6 </field>
55          <field field_ref="psiltot"  name="psiltot"  grid_ref="grid_1point" unit="umolC"  operation="instant" level="2" > psiltot * 1e6  </field>
56          <field field_ref="palktot"  name="palktot"  grid_ref="grid_1point" unit="umolC"  operation="instant" level="2" > palktot * 1e6  </field>
57          <field field_ref="pfertot"  name="pfertot"  grid_ref="grid_1point" unit="nmolFe" operation="instant" level="2" > pfertot * 1e9  </field>
58        </file>
59
60      </file_group> 
61
62       
63      <file_group id="1m_pis" output_freq="1mo" output_level="_AUTO_" enabled="_AUTO_" > <!-- real monthly files -->
64
65
66        <file id="file18" name_suffix="_ptrc_T" description="pisces sms variables" >
67          <field field_ref="DIC"       name="DIC"      operation="average" freq_op="1mo" level="2" > @DIC_E3T / @e3t </field>
68          <field field_ref="Alkalini"  name="Alkalini" operation="average" freq_op="1mo" level="2" > @Alkalini_E3T / @e3t </field>
69          <field field_ref="O2"        name="O2"       operation="average" freq_op="1mo" level="2" > @O2_E3T / @e3t </field>
70          <field field_ref="CaCO3"     name="CaCO3"    operation="average" freq_op="1mo" level="2" > @CaCO3_E3T / @e3t </field>
71          <field field_ref="PO4"       name="PO4"      operation="average" freq_op="1mo" level="2" > @PO4_E3T / @e3t </field>
72          <field field_ref="POC"       name="POC"      operation="average" freq_op="1mo" level="2" > @POC_E3T / @e3t </field>
73          <field field_ref="Si"        name="Si"       operation="average" freq_op="1mo" level="2" > @Si_E3T / @e3t </field>
74          <field field_ref="PHY"       name="PHY"      operation="average" freq_op="1mo" level="2" > @PHY_E3T / @e3t </field>
75          <field field_ref="ZOO"       name="ZOO"      operation="average" freq_op="1mo" level="2" > @ZOO_E3T / @e3t </field>
76          <field field_ref="DOC"       name="DOC"      operation="average" freq_op="1mo" level="2" > @DOC_E3T / @e3t </field>
77          <field field_ref="PHY2"      name="PHY2"     operation="average" freq_op="1mo" level="2" > @PHY2_E3T / @e3t </field>
78          <field field_ref="ZOO2"      name="ZOO2"     operation="average" freq_op="1mo" level="2" > @ZOO2_E3T / @e3t </field>
79          <field field_ref="DSi"       name="DSi"      operation="average" freq_op="1mo" level="2" > @DSi_E3T / @e3t </field>
80          <field field_ref="Fer"       name="Fer"      operation="average" freq_op="1mo" level="2" > @Fer_E3T / @e3t </field>
81          <field field_ref="BFe"       name="BFe"      operation="average" freq_op="1mo" level="2" > @BFe_E3T / @e3t </field>
82          <field field_ref="GOC"       name="GOC"      operation="average" freq_op="1mo" level="2" > @GOC_E3T / @e3t </field>
83          <field field_ref="SFe"       name="SFe"      operation="average" freq_op="1mo" level="2" > @SFe_E3T / @e3t </field>
84          <field field_ref="DFe"       name="DFe"      operation="average" freq_op="1mo" level="2" > @DFe_E3T / @e3t </field>
85          <field field_ref="GSi"       name="GSi"      operation="average" freq_op="1mo" level="2" > @GSi_E3T / @e3t </field>
86          <field field_ref="NFe"       name="NFe"      operation="average" freq_op="1mo" level="2" > @NFe_E3T / @e3t </field>
87          <field field_ref="NCHL"      name="NCHL"     operation="average" freq_op="1mo" level="2" > @NCHL_E3T / @e3t </field>
88          <field field_ref="DCHL"      name="DCHL"     operation="average" freq_op="1mo" level="2" > @DCHL_E3T / @e3t </field>
89          <field field_ref="NO3"       name="NO3"      operation="average" freq_op="1mo" level="2" > @NO3_E3T / @e3t </field>
90          <field field_ref="NH4"       name="NH4"      operation="average" freq_op="1mo" level="2" > @NH4_E3T / @e3t </field>
91       </file>
92
93
94
95       <file id="file19" name_suffix="_diad_T" description="additional pisces diagnostics" >
96
97        <field field_ref="PH"         name="PH"       level="2" />
98        <field field_ref="CO3"        name="CO3"      level="2" />
99        <field field_ref="CO3sat"     name="CO3sat"   level="2" />
100        <field field_ref="PAR"        name="PAR"      level="2" />
101        <field field_ref="PCAL"       name="PCAL"     level="2"  />
102        <field field_ref="Cflx"       name="Cflx"     level="2"  />
103        <field field_ref="Oflx"       name="Oflx"     level="2"  />
104        <field field_ref="Dpco2"      name="Dpco2"    level="2"   />
105        <field field_ref="Dpo2"       name="Dpo2"     level="2"  />
106        <field field_ref="Heup"       name="Heup"     level="2" />
107        <field field_ref="Irondep"    name="Irondep"  level="2" />
108        <field field_ref="Ironsed"    name="Ironsed"  level="2" />
109        <field field_ref="Nfix"       name="Nfix"     level="2" />
110        <field field_ref="LNnut"      name="LNnut"    level="2" />
111        <field field_ref="LDnut"      name="LDnut"    level="2" />
112        <field field_ref="LNFe"       name="LNFe"     level="2" />
113        <field field_ref="LDFe"       name="LDFe"     level="2" />
114        <field field_ref="LNlight"    name="LNlight"  level="2"  />
115        <field field_ref="LDlight"    name="LDlight"  level="2"  />
116        <field field_ref="TPP"        name="TPP"      level="2" />
117        <field field_ref="INTPP"      name="INTPP"    level="2" />
118        <field field_ref="INTPNEW"    name="INTPNEW"  level="2"  />
119        <field field_ref="TPNEW"      name="TPNEW"    level="2" />
120        <field field_ref="EPC100"     name="EPC100"   level="2" />
121        <field field_ref="EPFE100"    name="EPFE100"  level="2"  />
122        <field field_ref="EPSI100"    name="EPSI100"  level="2"  />
123        <field field_ref="EPCAL100"   name="EPCAL100" level="2"  />
124        <field field_ref="xfracal"    name="xfracal"  level="2" />
125
126       </file>
127       
128       <file id="file20" name_suffix="_bioscalar" description="pisces sms variables" >
129          <field field_ref="tdenit"   name="tdenit"   grid_ref="grid_1point" unit="TgN/yr" operation="instant" level="1" > tdenit * 14. * 86400. * 365. / 1e12 </field>
130          <field field_ref="tnfix"    name="tnfix"    grid_ref="grid_1point" unit="TgN/yr" operation="instant" level="1" > tnfix * 14. * 86400. * 365. / 1e12 </field>
131          <field field_ref="tcflx"    name="tcflx"    grid_ref="grid_1point" unit="PgC/yr" operation="instant" level="1" > tcflx * -1. * 12. * 86400. * 365. / 1e15 </field>
132          <field field_ref="tcflxcum" name="tcflxcum" grid_ref="grid_1point" unit="PgC"    operation="instant" level="1" > tcflxcum * -1. * 12. / 1e15 </field>
133          <field field_ref="tcexp"    name="tcexp"    grid_ref="grid_1point" unit="PgC/yr" operation="instant" level="1" > tcexp * 12. * 86400. * 365. / 1e15 </field>
134          <field field_ref="tintpp"   name="tintpp"   grid_ref="grid_1point" unit="PgC/yr" operation="instant" level="1" > tintpp * 12. * 86400. * 365. / 1e15 </field>
135          <field field_ref="pno3tot"  name="pno3tot"  grid_ref="grid_1point" unit="umolN"  operation="instant" level="1" > pno3tot * 16. / 122. * 1e6 </field>
136          <field field_ref="ppo4tot"  name="ppo4tot"  grid_ref="grid_1point" unit="umolP"  operation="instant" level="1" > ppo4tot * 1. / 122. * 1e6 </field>
137          <field field_ref="psiltot"  name="psiltot"  grid_ref="grid_1point" unit="umolC"  operation="instant" level="1" > psiltot * 1e6  </field>
138          <field field_ref="palktot"  name="palktot"  grid_ref="grid_1point" unit="umolC"  operation="instant" level="1" > palktot * 1e6  </field>
139          <field field_ref="pfertot"  name="pfertot"  grid_ref="grid_1point" unit="nmolFe" operation="instant" level="1" > pfertot * 1e9  </field>
140        </file>
141
142      </file_group>
143
144
145      <file_group id="2m_pis" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
146      <file_group id="3m_pis" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
147      <file_group id="4m_pis" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
148      <file_group id="6m_pis" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
149
150      <file_group id="1y_pis"  output_freq="1y" output_level="_AUTO_" enabled="_AUTO_"> <!-- real yearly files -->
151
152 
153       <file id="file21" name_suffix="_ptrc_T" description="pisces sms variables" >
154          <field field_ref="DIC"       name="DIC"      operation="average" freq_op="1y" level="1"  > @DIC_E3T / @e3t </field>
155          <field field_ref="Alkalini"  name="Alkalini" operation="average" freq_op="1y" level="1"  > @Alkalini_E3T / @e3t </field>
156          <field field_ref="O2"        name="O2"       operation="average" freq_op="1y" level="1"  > @O2_E3T / @e3t </field>
157          <field field_ref="CaCO3"     name="CaCO3"    operation="average" freq_op="1y" level="2" > @CaCO3_E3T / @e3t </field>
158          <field field_ref="PO4"       name="PO4"      operation="average" freq_op="1y" level="1"  > @PO4_E3T / @e3t </field>
159          <field field_ref="POC"       name="POC"      operation="average" freq_op="1y" level="1"  > @POC_E3T / @e3t </field>
160          <field field_ref="Si"        name="Si"       operation="average" freq_op="1y" level="1"  > @Si_E3T / @e3t </field>
161          <field field_ref="PHY"       name="PHY"      operation="average" freq_op="1y" level="2" > @PHY_E3T / @e3t </field>
162          <field field_ref="ZOO"       name="ZOO"      operation="average" freq_op="1y" level="2" > @ZOO_E3T / @e3t </field>
163          <field field_ref="DOC"       name="DOC"      operation="average" freq_op="1y" level="2" > @DOC_E3T / @e3t </field>
164          <field field_ref="PHY2"      name="PHY2"     operation="average" freq_op="1y" level="2" > @PHY2_E3T / @e3t </field>
165          <field field_ref="ZOO2"      name="ZOO2"     operation="average" freq_op="1y" level="2" > @ZOO2_E3T / @e3t </field>
166          <field field_ref="DSi"       name="DSi"      operation="average" freq_op="1y" level="2" > @DSi_E3T / @e3t </field>
167          <field field_ref="Fer"       name="Fer"      operation="average" freq_op="1y" level="1"  > @Fer_E3T / @e3t </field>
168          <field field_ref="BFe"       name="BFe"      operation="average" freq_op="1y" level="2" > @BFe_E3T / @e3t </field>
169          <field field_ref="GOC"       name="GOC"      operation="average" freq_op="1y" level="1"  > @GOC_E3T / @e3t </field>
170          <field field_ref="SFe"       name="SFe"      operation="average" freq_op="1y" level="2" > @SFe_E3T / @e3t </field>
171          <field field_ref="DFe"       name="DFe"      operation="average" freq_op="1y" level="2" > @DFe_E3T / @e3t </field>
172          <field field_ref="GSi"       name="GSi"      operation="average" freq_op="1y" level="2" > @GSi_E3T / @e3t </field>
173          <field field_ref="NFe"       name="NFe"      operation="average" freq_op="1y" level="2" > @NFe_E3T / @e3t </field>
174          <field field_ref="NCHL"      name="NCHL"     operation="average" freq_op="1y" level="1"  > @NCHL_E3T / @e3t </field>
175          <field field_ref="DCHL"      name="DCHL"     operation="average" freq_op="1y" level="1"  > @DCHL_E3T / @e3t </field>
176          <field field_ref="NO3"       name="NO3"      operation="average" freq_op="1y" level="1"  > @NO3_E3T / @e3t </field>
177          <field field_ref="NH4"       name="NH4"      operation="average" freq_op="1y" level="2" > @NH4_E3T / @e3t </field>
178       </file>
179
180      <file id="file22" name_suffix="_diad_T" description="additional pisces diagnostics"  >
181
182        <field field_ref="PH"         name="PH"       level="2" />
183        <field field_ref="CO3"        name="CO3"      level="2" />
184        <field field_ref="CO3sat"     name="CO3sat"   level="2" />
185        <field field_ref="PAR"        name="PAR"      level="2" />
186        <field field_ref="PCAL"       name="PCAL"     level="2"  />
187        <field field_ref="Cflx"       name="Cflx"     level="1"  />
188        <field field_ref="Oflx"       name="Oflx"     level="2"  />
189        <field field_ref="Dpco2"      name="Dpco2"    level="1"   />
190        <field field_ref="Dpo2"       name="Dpo2"     level="2"  />
191        <field field_ref="Heup"       name="Heup"     level="1" />
192        <field field_ref="Irondep"    name="Irondep"  level="2" />
193        <field field_ref="Ironsed"    name="Ironsed"  level="2" />
194        <field field_ref="Nfix"       name="Nfix"     level="1" />
195        <field field_ref="LNnut"      name="LNnut"    level="2" />
196        <field field_ref="LDnut"      name="LDnut"    level="2" />
197        <field field_ref="LNFe"       name="LNFe"     level="2" />
198        <field field_ref="LDFe"       name="LDFe"     level="2" />
199        <field field_ref="LNlight"    name="LNlight"  level="2"  />
200        <field field_ref="LDlight"    name="LDlight"  level="2"  />
201        <field field_ref="TPP"        name="TPP"      level="1" />
202        <field field_ref="INTPP"      name="INTPP"    level="1" />
203        <field field_ref="INTPNEW"    name="INTPNEW"  level="2"  />
204        <field field_ref="TPNEW"      name="TPNEW"    level="2" />
205        <field field_ref="EPC100"     name="EPC100"   level="1" />
206        <field field_ref="EPFE100"    name="EPFE100"  level="1"  />
207        <field field_ref="EPSI100"    name="EPSI100"  level="1"  />
208        <field field_ref="EPCAL100"   name="EPCAL100" level="1"  />
209        <field field_ref="xfracal"    name="xfracal"  level="2" />
210
211        </file>
212
213       <file id="file23" name_suffix="_age" description="Age inert tracer" >
214          <field field_ref="Age"       name="Age"      operation="average" freq_op="1y"  level="1"  > @Age_E3T / @e3t </field>
215       </file>
216
217      </file_group>
218
219      <file_group id="2y_pis"  output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
220      <file_group id="5y_pis"  output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
221      <file_group id="10y_pis" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
222
223   </file_definition>
224
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