1 | [Compatibility] |
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2 | libIGCM=1.0 |
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3 | |
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4 | [UserChoices] |
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5 | #============================================================== |
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6 | #-- Name of directory for COMMON ACCOUNT at idris or CCRT |
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7 | #-- available directories are: v3, v3_1, v3_2 |
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8 | #-- related to NEMO_tag_revision (nemo_v3, nemo_v3_1, nemo_v3_2_beta) |
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9 | #-- NOTE: if you use COMMON ACCOUNT you have to de-comment it |
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10 | OPA_version=v4.0.2 |
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11 | mesh_mask=n |
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12 | OutputLevel=10 |
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13 | # |
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14 | # On ADA |
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15 | #================================================================================================== |
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16 | #-- Surface Boundary Condition. For interannual run, needs 3 consecutives years for each forcing file |
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17 | #-- Structure : to simulate year 2000, needs u_10_y1999.nc, u_10_y2000.nc & u_10_y2001.nc |
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18 | #================================================================================================== |
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19 | forcing=core |
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20 | R_FORCING=${R_IN}/OCE/NEMO/FORCINGS/COREII |
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21 | #============================================================== |
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22 | |
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23 | [InitialStateFiles] |
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24 | List= (${SUBMIT_DIR}/PARAM/NAMELIST/EMPave_old.dat, EMPave_old.dat) |
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25 | |
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26 | |
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27 | [BoundaryFiles] |
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28 | List= (${opa9_UserChoices_R_FORCING}/u_10.15JUNE2009_fill.nc , u_10_CORE2_fill.nc), \ |
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29 | (${opa9_UserChoices_R_FORCING}/v_10.15JUNE2009_fill.nc , v_10_CORE2_fill.nc), \ |
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30 | (${opa9_UserChoices_R_FORCING}/t_10.15JUNE2009_fill.nc , t_10_CORE2_fill.nc), \ |
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31 | (${opa9_UserChoices_R_FORCING}/q_10.15JUNE2009_fill.nc , q_10_CORE2_fill.nc), \ |
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32 | (${opa9_UserChoices_R_FORCING}/ncar_rad.15JUNE2009_fill.nc , ncar_rad_CORE2_fill), \ |
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33 | (${opa9_UserChoices_R_FORCING}/ncar_precip.15JUNE2009_fill.nc , ncar_precip_CORE2_fill), \ |
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34 | (${opa9_UserChoices_R_FORCING}/slp.15JUNE2009_fill.nc , slp_CORE2_fill), \ |
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35 | (${opa9_UserChoices_R_FORCING}/weights_core_orca2_bilinear_noc.nc , weights_bilinear.nc), \ |
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36 | (${opa9_UserChoices_R_FORCING}/weights_core_orca2_bicubic_noc.nc , weights_bicubic.nc) |
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37 | |
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38 | |
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39 | ListNonDel= (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/coordinates.nc, . ), \ |
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40 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/ORCA_R2_zps_domcfg.nc, domain_cfg.nc), \ |
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41 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/ORCA2_coordinates_xios.nc, coordinates_xios.nc ), \ |
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42 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/maskMFO_ORCA2.nc, maskMFO.nc ), \ |
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43 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/eddy_viscosity_2D.nc, .),\ |
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44 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/eddy_viscosity_3D.nc, .),\ |
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45 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/potT_PHC3WOA_ORCA2_IOVI.nc, data_1m_potential_temperature_nomask.nc), \ |
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46 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/Salt_corr_PHC3WOA09.nc, data_1m_salinity_nomask.nc), \ |
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47 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/geothermal_heating.nc, .),\ |
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48 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/runoff_core_monthly.nc, .),\ |
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49 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/sss_corr_PHC3WOA09.nc, sss_data.nc),\ |
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50 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/sst_PHC3WOA_ORCA2_IOVI.nc, sst_data.nc),\ |
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51 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/sali_ref_clim_monthly.nc, .),\ |
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52 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/chlorophyll.nc, .),\ |
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53 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/mixing_power_bot.nc, .),\ |
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54 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/mixing_power_pyc.nc, .),\ |
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55 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/mixing_power_cri.nc, .),\ |
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56 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/decay_scale_bot.nc, .),\ |
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57 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/decay_scale_cri.nc, .),\ |
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58 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/resto.nc, .) |
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59 | |
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60 | |
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61 | [ParametersFiles] |
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62 | List= (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_ref , namelist_ref ), \ |
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63 | (${MODIPSL}/modeles/NEMO/cfgs/SHARED/domain_def_nemo.xml , domain_def_nemo.xml ), \ |
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64 | (${MODIPSL}/modeles/NEMO/cfgs/SHARED/axis_def_nemo.xml , axis_def_nemo.xml ), \ |
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65 | (${MODIPSL}/modeles/NEMO/cfgs/SHARED/grid_def_nemo.xml , grid_def_nemo.xml ), \ |
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66 | (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-oce.xml , field_def_nemo-oce.xml ), \ |
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67 | (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_${opa9_UserChoices_forcing}_${exptype}_cfg, namelist_cfg), \ |
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68 | (${SUBMIT_DIR}/PARAM/XML/context_nemo.xml , context_nemo.xml ), \ |
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69 | (${SUBMIT_DIR}/PARAM/XML/iodef.xml , iodef.xml ), \ |
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70 | (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-oce.xml , file_def_nemo-oce.xml ) |
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71 | |
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72 | |
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73 | [RestartFiles] |
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74 | List= (${config_UserChoices_JobName}_${NEMO_END}_restart.nc, restart.nc, restart.nc), \ |
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75 | (EMPave.dat, EMPave.dat, EMPave_old.dat) |
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76 | |
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77 | [OutputText] |
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78 | List= (ocean.output, run.stat, STRAIT.dat, namelist_ref, namelist_cfg ) |
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79 | |
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80 | [OutputFiles] |
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81 | List= (${config_UserChoices_JobName}_1y_scalar.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_scalar.nc , NONE ),\ |
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82 | (${config_UserChoices_JobName}_1y_grid_T.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_grid_T.nc , NONE ),\ |
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83 | (${config_UserChoices_JobName}_1y_grid_U.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_grid_U.nc , NONE ),\ |
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84 | (${config_UserChoices_JobName}_1y_grid_V.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_grid_V.nc , NONE ),\ |
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85 | (${config_UserChoices_JobName}_1y_grid_W.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_grid_W.nc , NONE ),\ |
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86 | (${config_UserChoices_JobName}_1y_diaptr_T_2D.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_diaptr_T.nc , NONE ),\ |
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87 | (${config_UserChoices_JobName}_1y_diaptr_T_3D.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_diaptr_T.nc , NONE ),\ |
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88 | (${config_UserChoices_JobName}_1y_diaptr_W.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_diaptr_W.nc , NONE ),\ |
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89 | (${config_UserChoices_JobName}_1y_trdtra.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_trdtra.nc , NONE ),\ |
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90 | (${config_UserChoices_JobName}_1m_scalar.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_scalar.nc , Post_1M_scalar),\ |
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91 | (${config_UserChoices_JobName}_1m_grid_T.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_grid_T.nc , Post_1M_grid_T),\ |
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92 | (${config_UserChoices_JobName}_1m_grid_U.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_grid_U.nc , Post_1M_grid_U),\ |
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93 | (${config_UserChoices_JobName}_1m_grid_V.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_grid_V.nc , Post_1M_grid_V),\ |
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94 | (${config_UserChoices_JobName}_1m_grid_W.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_grid_W.nc , Post_1M_grid_W),\ |
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95 | (${config_UserChoices_JobName}_1m_diaptr_T_2D.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_diaptr_T_2D.nc, NONE),\ |
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96 | (${config_UserChoices_JobName}_1m_diaptr_T_3D.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_diaptr_T_3D.nc, NONE),\ |
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97 | (${config_UserChoices_JobName}_1m_diaptr_W.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_diaptr_W.nc , Post_1M_diaptr_W),\ |
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98 | (${config_UserChoices_JobName}_1m_strait_oce.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_strait_oce.nc , NONE ),\ |
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99 | (${config_UserChoices_JobName}_1m_trdtra.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_trdtra.nc , NONE ),\ |
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100 | (${config_UserChoices_JobName}_5d_grid_T.nc , ${R_OUT_OCE_O_D}/${PREFIX}_5D_grid_T.nc , NONE ),\ |
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101 | (${config_UserChoices_JobName}_5d_grid_U.nc , ${R_OUT_OCE_O_D}/${PREFIX}_5D_grid_U.nc , NONE ),\ |
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102 | (${config_UserChoices_JobName}_5d_grid_V.nc , ${R_OUT_OCE_O_D}/${PREFIX}_5D_grid_V.nc , NONE ),\ |
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103 | (${config_UserChoices_JobName}_5d_grid_W.nc , ${R_OUT_OCE_O_D}/${PREFIX}_5D_grid_W.nc , NONE ),\ |
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104 | (${config_UserChoices_JobName}_5d_trdtra.nc , ${R_OUT_OCE_O_D}/${PREFIX}_5D_trdtra.nc , NONE ),\ |
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105 | (${config_UserChoices_JobName}_1d_grid_T.nc , ${R_OUT_OCE_O_D}/${PREFIX}_1D_grid_T.nc , NONE ),\ |
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106 | (${config_UserChoices_JobName}_1d_grid_U.nc , ${R_OUT_OCE_O_D}/${PREFIX}_1D_grid_U.nc , NONE ),\ |
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107 | (${config_UserChoices_JobName}_1d_grid_W.nc , ${R_OUT_OCE_O_D}/${PREFIX}_1D_grid_W.nc , NONE ),\ |
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108 | (${config_UserChoices_JobName}_1d_SBC.nc , ${R_OUT_OCE_O_D}/${PREFIX}_1D_SBC.nc , NONE ),\ |
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109 | (${config_UserChoices_JobName}_1d_scalar.nc , ${R_OUT_OCE_O_D}/${PREFIX}_1D_scalar.nc , NONE ),\ |
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110 | (mesh_mask.nc , ${R_OUT_OCE_O}/${config_UserChoices_JobName}_mesh_mask.nc , NONE ),\ |
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111 | (runoffs.nc , ${R_OUT_OCE_O}/${config_UserChoices_JobName}_runoffs.nc , NONE ),\ |
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112 | (damping.coeff.nc , ${R_OUT_OCE_O_D}/${PREFIX}_damping.coeff.nc , NONE ),\ |
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113 | (output.abort.nc , ${R_OUT_OCE_D}/${PREFIX}_output.abort.nc , NONE ),\ |
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114 | (output.init.nc , ${R_OUT_OCE_O_I}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE ) |
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115 | |
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116 | # Monthly analysis |
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117 | |
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118 | [Post_1M_scalar] |
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119 | Patches = () |
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120 | GatherWithInternal = (time_counter, time_centered, time_centered_bounds) |
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121 | TimeSeriesVars2D = (scmastot, scvoltot, scsshtot, scsshste, scsshtst, sctemtot, scsaltot, ibgheat_tot, sbgheat_tot) |
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122 | ChunckJob2D = NONE |
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123 | TimeSeriesVars3D = () |
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124 | ChunckJob3D = NONE |
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125 | Seasonal=OFF |
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126 | |
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127 | [Post_1M_grid_T] |
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128 | Patches = () |
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129 | GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) |
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130 | TimeSeriesVars2D = (zos, tos, sos, mldr10_1, nshfls, rsntds, rsds, friver, hc300, wfo) |
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131 | ChunckJob2D = NONE |
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132 | TimeSeriesVars3D = (e3t, thetao, so) |
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133 | ChunckJob3D = 100Y |
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134 | Seasonal=ON |
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135 | |
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136 | [Post_1M_grid_U] |
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137 | Patches = () |
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138 | GatherWithInternal = (nav_lon, nav_lat, depthu, time_counter, time_centered, time_centered_bounds) |
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139 | TimeSeriesVars2D = (tauuo) |
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140 | ChunckJob2D = NONE |
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141 | TimeSeriesVars3D = (e3u, uocetr_eff) |
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142 | ChunckJob3D = 100Y |
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143 | Seasonal=ON |
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144 | |
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145 | [Post_1M_grid_V] |
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146 | Patches = () |
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147 | GatherWithInternal = (nav_lon, nav_lat, depthv, time_counter, time_centered, time_centered_bounds) |
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148 | TimeSeriesVars2D = (tauvo) |
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149 | ChunckJob2D = NONE |
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150 | TimeSeriesVars3D = (e3v, vocetr_eff) |
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151 | ChunckJob3D = 100Y |
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152 | Seasonal=ON |
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153 | |
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154 | [Post_1M_grid_W] |
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155 | Patches = () |
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156 | GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) |
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157 | TimeSeriesVars2D = ( ) |
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158 | ChunckJob2D = NONE |
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159 | TimeSeriesVars3D = ( ) |
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160 | ChunckJob3D = 100Y |
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161 | Seasonal=OFF |
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162 | |
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163 | [Post_1M_diaptr_W] |
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164 | Patches = () |
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165 | GatherWithInternal = (nav_lat, depthw, time_counter, time_centered, time_centered_bounds) |
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166 | TimeSeriesVars2D = (msftyz_glo, msftyz_atl, msftyz_ind) |
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167 | ChunckJob2D = NONE |
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168 | TimeSeriesVars3D = () |
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169 | ChunckJob3D = NONE |
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170 | Seasonal=OFF |
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171 | |
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