[3856] | 1 | [Compatibility] |
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| 2 | libIGCM=1.0 |
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| 3 | |
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| 4 | [UserChoices] |
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| 5 | #============================================================== |
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| 6 | #-- Name of directory for COMMON ACCOUNT at idris or CCRT |
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| 7 | #-- available directories are: v3, v3_1, v3_2 |
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| 8 | #-- related to NEMO_tag_revision (nemo_v3, nemo_v3_1, nemo_v3_2_beta) |
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| 9 | #-- NOTE: if you use COMMON ACCOUNT you have to de-comment it |
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| 10 | OPA_version=v3.6_stable |
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| 11 | mesh_mask=n |
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| 12 | OutputLevel=10 |
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| 13 | #================================================================================================== |
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| 14 | #-- Surface Boundary Condition. For interannual run, needs 3 consecutives years for each forcing file |
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| 15 | #-- Structure : to simulate year 2000, needs u_10_y1999.nc, u_10_y2000.nc & u_10_y2001.nc |
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| 16 | #================================================================================================== |
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| 17 | forcing=jra |
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[4683] | 18 | R_FORCING=${R_IN}/OCE/NEMO/FORCINGS/MRI-JRA55-do-1-4-0 |
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[6072] | 19 | ListForcing=(u_10 v_10 t_10 q_10 rsds rlds precip snow) |
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[3856] | 20 | YearForcingInit=1958 |
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[4683] | 21 | YearForcingEnd=2016 |
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[3856] | 22 | |
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| 23 | [InitialStateFiles] |
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| 24 | List= (${SUBMIT_DIR}/PARAM/NAMELIST/EMPave_old.dat, EMPave_old.dat) |
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| 25 | |
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| 26 | [BoundaryFiles] |
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[3860] | 27 | List= (${opa9_UserChoices_R_FORCING}/weights_JRA55_ORCA2_bilinear.nc, weights_bilinear.nc), \ |
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| 28 | (${opa9_UserChoices_R_FORCING}/weights_JRA55_ORCA2_bicubic.nc , weights_bicubic.nc) |
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[3856] | 29 | |
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| 30 | |
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| 31 | ListNonDel= (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/ahmcoef.nc, .), \ |
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| 32 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/bathy_level.nc, .), \ |
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| 33 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/bathy_meter.nc, .), \ |
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| 34 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/coordinates.nc, .), \ |
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| 35 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/potT_PHC3WOA_ORCA2_IOVI.nc, data_1m_potential_temperature_nomask.nc), \ |
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| 36 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/Salt_corr_PHC3WOA09.nc, data_1m_salinity_nomask.nc), \ |
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| 37 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/geothermal_heating.nc, .),\ |
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| 38 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/runoff_core_monthly.nc, .),\ |
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| 39 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/sss_corr_PHC3WOA09.nc, sss_data.nc),\ |
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| 40 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/sst_PHC3WOA_ORCA2_IOVI.nc, sst_data.nc),\ |
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| 41 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/sali_ref_clim_monthly.nc, .),\ |
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| 42 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/chlorophyll.nc, .),\ |
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| 43 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/mixing_power_bot.nc, .),\ |
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| 44 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/mixing_power_pyc.nc, .),\ |
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| 45 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/mixing_power_cri.nc, .),\ |
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| 46 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/decay_scale_bot.nc, .),\ |
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| 47 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/decay_scale_cri.nc, .),\ |
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| 48 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/K1rowdrg.nc, .),\ |
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| 49 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/M2rowdrg.nc, .),\ |
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| 50 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/mask_itf.nc, .),\ |
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| 51 | (${R_IN}/OCE/NEMO/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/resto.nc, .) |
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| 52 | |
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| 53 | |
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| 54 | [ParametersFiles] |
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| 55 | List= (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_ref , namelist_ref ), \ |
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| 56 | (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/context_nemo.xml , context_nemo.xml ), \ |
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| 57 | (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/domain_def_nemo.xml , domain_def_nemo.xml ), \ |
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| 58 | (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/axis_def_nemo.xml , axis_def_nemo.xml ), \ |
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| 59 | (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/grids_def_nemo.xml , grids_def_nemo.xml ), \ |
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| 60 | (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-opa.xml , field_def_nemo-opa.xml ), \ |
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| 61 | (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_${opa9_UserChoices_forcing}_${exptype}_cfg, namelist_cfg), \ |
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[3992] | 62 | (${SUBMIT_DIR}/PARAM/XML/iodef.xml , iodef.xml ), \ |
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[3856] | 63 | (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-opa.xml , file_def_nemo-opa.xml ) |
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| 64 | |
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| 65 | [RestartFiles] |
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| 66 | List= (${config_UserChoices_JobName}_${NEMO_END}_restart.nc, restart.nc, restart.nc), \ |
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| 67 | (EMPave.dat, EMPave.dat, EMPave_old.dat) |
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| 68 | |
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| 69 | [OutputText] |
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| 70 | List= (ocean.output, solver.stat, STRAIT.dat, namelist_ref, namelist_cfg ) |
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| 71 | |
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| 72 | |
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| 73 | [OutputFiles] |
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| 74 | List= (${config_UserChoices_JobName}_1y_scalar.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_scalar.nc , NONE ),\ |
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| 75 | (${config_UserChoices_JobName}_1y_grid_T.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_grid_T.nc , NONE ),\ |
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| 76 | (${config_UserChoices_JobName}_1y_grid_U.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_grid_U.nc , NONE ),\ |
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| 77 | (${config_UserChoices_JobName}_1y_grid_V.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_grid_V.nc , NONE ),\ |
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| 78 | (${config_UserChoices_JobName}_1y_grid_W.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_grid_W.nc , NONE ),\ |
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[3860] | 79 | (${config_UserChoices_JobName}_1y_diaptr_T.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_diaptr_T.nc , NONE ),\ |
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| 80 | (${config_UserChoices_JobName}_1y_diaptr_W.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_diaptr_W.nc , NONE ),\ |
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[3856] | 81 | (${config_UserChoices_JobName}_1y_trdtra.nc , ${R_OUT_OCE_O_Y}/${PREFIX}_1Y_trdtra.nc , NONE ),\ |
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| 82 | (${config_UserChoices_JobName}_1m_scalar.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_scalar.nc , Post_1M_scalar),\ |
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| 83 | (${config_UserChoices_JobName}_1m_grid_T.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_grid_T.nc , Post_1M_grid_T),\ |
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| 84 | (${config_UserChoices_JobName}_1m_grid_U.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_grid_U.nc , Post_1M_grid_U),\ |
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| 85 | (${config_UserChoices_JobName}_1m_grid_V.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_grid_V.nc , Post_1M_grid_V),\ |
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| 86 | (${config_UserChoices_JobName}_1m_grid_W.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_grid_W.nc , Post_1M_grid_W),\ |
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| 87 | (${config_UserChoices_JobName}_1m_diaptr_T.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_diaptr_T.nc , Post_1M_diaptr_T),\ |
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| 88 | (${config_UserChoices_JobName}_1m_diaptr_W.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_diaptr_W.nc , Post_1M_diaptr_W),\ |
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[3860] | 89 | (${config_UserChoices_JobName}_1m_trdtra.nc , ${R_OUT_OCE_O_M}/${PREFIX}_1M_trdtra.nc , NONE ),\ |
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[3856] | 90 | (${config_UserChoices_JobName}_5d_grid_T.nc , ${R_OUT_OCE_O_D}/${PREFIX}_5D_grid_T.nc , NONE ),\ |
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| 91 | (${config_UserChoices_JobName}_5d_grid_U.nc , ${R_OUT_OCE_O_D}/${PREFIX}_5D_grid_U.nc , NONE ),\ |
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| 92 | (${config_UserChoices_JobName}_5d_grid_V.nc , ${R_OUT_OCE_O_D}/${PREFIX}_5D_grid_V.nc , NONE ),\ |
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| 93 | (${config_UserChoices_JobName}_5d_grid_W.nc , ${R_OUT_OCE_O_D}/${PREFIX}_5D_grid_W.nc , NONE ),\ |
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| 94 | (${config_UserChoices_JobName}_5d_trdtra.nc , ${R_OUT_OCE_O_D}/${PREFIX}_5D_trdtra.nc , NONE ),\ |
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[3860] | 95 | (${config_UserChoices_JobName}_1d_grid_T.nc , ${R_OUT_OCE_O_D}/${PREFIX}_1D_grid_T.nc , NONE ),\ |
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| 96 | (${config_UserChoices_JobName}_1d_grid_U.nc , ${R_OUT_OCE_O_D}/${PREFIX}_1D_grid_U.nc , NONE ),\ |
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[3856] | 97 | (${config_UserChoices_JobName}_1d_grid_W.nc , ${R_OUT_OCE_O_D}/${PREFIX}_1D_grid_W.nc , NONE ),\ |
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| 98 | (${config_UserChoices_JobName}_1d_SBC.nc , ${R_OUT_OCE_O_D}/${PREFIX}_1D_SBC.nc , NONE ),\ |
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| 99 | (${config_UserChoices_JobName}_1d_diaptr_T.nc , ${R_OUT_OCE_O_D}/${PREFIX}_1D_diaptr_T.nc , NONE ),\ |
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| 100 | (${config_UserChoices_JobName}_1d_diaptr_W.nc , ${R_OUT_OCE_O_D}/${PREFIX}_1D_diaptr_W.nc , NONE ),\ |
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| 101 | (${config_UserChoices_JobName}_1d_scalar.nc , ${R_OUT_OCE_O_D}/${PREFIX}_1D_scalar.nc , NONE ),\ |
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[3861] | 102 | (mesh_mask.nc , ${R_OUT_OCE_O}/${config_UserChoices_JobName}_mesh_mask.nc , NONE ),\ |
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| 103 | (runoffs.nc , ${R_OUT_OCE_O}/${config_UserChoices_JobName}_runoffs.nc , NONE ),\ |
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| 104 | (damping.coeff.nc , ${R_OUT_OCE_O_D}/${PREFIX}_damping.coeff.nc , NONE ),\ |
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| 105 | (output.abort.nc , ${R_OUT_OCE_D}/${PREFIX}_output.abort.nc , NONE ),\ |
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| 106 | (output.init.nc , ${R_OUT_OCE_O_I}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE ) |
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[3856] | 107 | |
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[3861] | 108 | |
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[3856] | 109 | # Monthly analysis |
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| 110 | |
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| 111 | [Post_1M_scalar] |
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| 112 | Patches = () |
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| 113 | GatherWithInternal = (time_counter, time_centered, time_centered_bounds) |
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| 114 | TimeSeriesVars2D = (scmastot, scvoltot, scsshtot, scsshste, scsshtst, sctemtot, scsaltot, ibgheat_tot, sbgheat_tot) |
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| 115 | ChunckJob2D = NONE |
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| 116 | TimeSeriesVars3D = () |
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| 117 | ChunckJob3D = NONE |
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| 118 | Seasonal=OFF |
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| 119 | |
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| 120 | [Post_1M_grid_T] |
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| 121 | Patches = () |
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| 122 | GatherWithInternal = (nav_lon, nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 123 | TimeSeriesVars2D = (zos, zossq, tos, sos, tossq, omlmax, mldkz5, mldr10_1, nshfls, rsntds, rsds, friver, hc300, wfo) |
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| 124 | ChunckJob2D = NONE |
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| 125 | TimeSeriesVars3D = (e3t, thetao, so) |
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| 126 | ChunckJob3D = 100Y |
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| 127 | Seasonal=ON |
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| 128 | |
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| 129 | [Post_1M_grid_U] |
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| 130 | Patches = () |
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| 131 | GatherWithInternal = (nav_lon, nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 132 | TimeSeriesVars2D = (tauuo, sozohetr, sozosatr) |
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| 133 | ChunckJob2D = NONE |
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| 134 | TimeSeriesVars3D = (e3u, uo) |
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| 135 | ChunckJob3D = 100Y |
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| 136 | Seasonal=ON |
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| 137 | |
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| 138 | [Post_1M_grid_V] |
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| 139 | Patches = () |
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| 140 | GatherWithInternal = (nav_lon, nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 141 | TimeSeriesVars2D = (tauvo, somehetr, somesatr) |
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| 142 | ChunckJob2D = NONE |
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| 143 | TimeSeriesVars3D = (e3v, vo) |
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| 144 | ChunckJob3D = 100Y |
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| 145 | Seasonal=ON |
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| 146 | |
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| 147 | [Post_1M_grid_W] |
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| 148 | Patches = () |
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| 149 | GatherWithInternal = (nav_lon, nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 150 | TimeSeriesVars2D = ( ) |
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| 151 | ChunckJob2D = NONE |
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| 152 | TimeSeriesVars3D = ( ) |
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| 153 | ChunckJob3D = 100Y |
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| 154 | Seasonal=ON |
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| 155 | |
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| 156 | [Post_1M_diaptr_T] |
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| 157 | Patches = () |
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| 158 | GatherWithInternal = (nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 159 | TimeSeriesVars2D = (zotemglo, zotematl, zotempac, zotemind, zotemipc, zosalglo, zosalatl, zosalpac, zosalind, zosalipc, zosrfglo, zosrfatl, zosrfpac, zosrfind, zosrfipc, sophtadv, sophtldf, sopstadv, sopstldf) |
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| 160 | ChunckJob2D = NONE |
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| 161 | TimeSeriesVars3D = () |
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| 162 | ChunckJob3D = NONE |
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| 163 | Seasonal=ON |
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| 164 | |
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| 165 | [Post_1M_diaptr_W] |
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| 166 | Patches = () |
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| 167 | GatherWithInternal = (nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 168 | TimeSeriesVars2D = (zomsfglo, zomsfatl, zomsfpac, zomsfind, zomsfipc) |
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| 169 | ChunckJob2D = NONE |
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| 170 | TimeSeriesVars3D = () |
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| 171 | ChunckJob3D = NONE |
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| 172 | Seasonal=ON |
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| 173 | |
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| 174 | [Post_1M_trdtra] |
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| 175 | Patches = () |
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| 176 | GatherWithInternal = (nav_lon, nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 177 | TimeSeriesVars2D = NONE |
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| 178 | ChunckJob2D = NONE |
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| 179 | TimeSeriesVars3D = (ttrdtr_zdfp, ttrdtr_eivad, ttrdtr_iso, ttrdtr_totad, ttrdtr_tot, strdtr_zdfp, strdtr_eivad, strdtr_iso, strdtr_totad, strdtr_tot) |
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| 180 | ChunckJob3D = 100Y |
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| 181 | Seasonal=ON |
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| 182 | |
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| 183 | # Daily analysis |
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| 184 | |
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| 185 | [Post_1D_grid_T] |
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| 186 | Patches = () |
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| 187 | GatherWithInternal = (nav_lon, nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 188 | TimeSeriesVars2D = (tos, tosstd, sos, zos, zosstd, sstdcy, mldr10_1, mldr10_1dcy, mldkz5) |
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| 189 | ChunckJob2D = OFF |
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| 190 | TimeSeriesVars3D = () |
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| 191 | ChunckJob3D = OFF |
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| 192 | Seasonal=OFF |
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| 193 | |
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| 194 | [Post_1D_grid_U] |
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| 195 | Patches = () |
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| 196 | GatherWithInternal = (nav_lon, nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 197 | TimeSeriesVars2D = () |
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| 198 | ChunckJob2D = 100Y |
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| 199 | TimeSeriesVars3D = () |
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| 200 | ChunckJob3D = OFF |
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| 201 | Seasonal=OFF |
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| 202 | |
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| 203 | [Post_1D_grid_V] |
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| 204 | Patches = () |
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| 205 | GatherWithInternal = (nav_lon, nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 206 | TimeSeriesVars2D = () |
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| 207 | ChunckJob2D = 200Y |
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| 208 | TimeSeriesVars3D = () |
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| 209 | ChunckJob3D = OFF |
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| 210 | Seasonal=OFF |
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| 211 | |
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| 212 | ## Yearly analysis |
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| 213 | |
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| 214 | [Post_1Y_scalar] |
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| 215 | Patches = () |
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| 216 | GatherWithInternal = (time_counter, time_centered, time_centered_bounds) |
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| 217 | TimeSeriesVars2D = (scmastot, scvoltot, scsshtot, scsshste, scsshtst, sctemtot, scsaltot, ibgheat_tot, sbgheat_tot) |
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| 218 | ChunckJob2D = NONE |
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| 219 | TimeSeriesVars3D = () |
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| 220 | ChunckJob3D = NONE |
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| 221 | Seasonal=OFF |
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| 222 | |
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| 223 | [Post_1Y_grid_T] |
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| 224 | Patches = () |
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| 225 | GatherWithInternal = (nav_lon, nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 226 | TimeSeriesVars2D = ( ) |
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| 227 | ChunckJob2D = NONE |
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| 228 | TimeSeriesVars3D = (thetao, so) |
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| 229 | ChunckJob3D = 50Y |
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| 230 | Seasonal=OFF |
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| 231 | |
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| 232 | [Post_1Y_grid_U] |
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| 233 | Patches = () |
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| 234 | GatherWithInternal = (nav_lon, nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 235 | TimeSeriesVars2D = (hfx, hfxba, hfxdiff, sozotaux) |
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| 236 | ChunckJob2D = NONE |
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| 237 | TimeSeriesVars3D = (umo, vozocrtx,vozoeivu) |
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| 238 | ChunckJob3D = 50Y |
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| 239 | Seasonal=OFF |
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| 240 | |
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| 241 | [Post_1Y_grid_V] |
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| 242 | Patches = () |
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| 243 | GatherWithInternal = (nav_lon, nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 244 | TimeSeriesVars2D = ( ) |
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| 245 | ChunckJob2D = NONE |
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| 246 | TimeSeriesVars3D = ( ) |
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| 247 | ChunckJob3D = 50Y |
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| 248 | Seasonal=OFF |
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| 249 | |
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| 250 | [Post_1Y_diaptr_T] |
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| 251 | Patches = () |
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| 252 | GatherWithInternal = (nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 253 | TimeSeriesVars2D = (zotemglo, zotematl, zotempac, zotemind, zotemipc, zosalglo, zosalatl, zosalpac, zosalind, zosalipc, zosrfglo, zosrfatl, zosrfpac, zosrfind, zosrfipc, sophtadv, sophtldf, sopstadv, sopstldf) |
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| 254 | ChunckJob2D = NONE |
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| 255 | TimeSeriesVars3D = () |
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| 256 | ChunckJob3D = NONE |
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| 257 | Seasonal=OFF |
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| 258 | |
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| 259 | [Post_1Y_diaptr_W] |
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| 260 | Patches = () |
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| 261 | GatherWithInternal = (nav_lat, olevel, time_counter, time_centered, time_centered_bounds) |
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| 262 | TimeSeriesVars2D = (zomsfglo, zomsfatl, zomsfpac, zomsfind, zomsfipc) |
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| 263 | ChunckJob2D = NONE |
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| 264 | TimeSeriesVars3D = () |
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| 265 | ChunckJob3D = NONE |
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| 266 | Seasonal=OFF |
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