[2639] | 1 | #!/bin/ksh |
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| 2 | #----------------------------------------------------------------- |
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| 3 | function OCE_Initialize |
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| 4 | { |
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| 5 | IGCM_debug_PushStack "OCE_Initialize" |
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| 6 | |
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[2647] | 7 | RESOL_OCE=$( echo ${config_UserChoices_ExperimentName} | cut -c1-5 ) |
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[2663] | 8 | EXPTYPE=$( echo ${config_UserChoices_ExperimentName} | cut -c6- ) |
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[2639] | 9 | |
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| 10 | # Local function to find namelists parameters |
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| 11 | supergrep () { |
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| 12 | grep "^ *$1 *=" $2 | sed -e "s% *\!.*%%" |
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| 13 | } |
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| 14 | |
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[2663] | 15 | OPA_RDT=$( supergrep rn_rdt ${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}${EXPTYPE}_cfg | sed 's/ *rn_rdt *=//' | sed 's/\. *,//' ) |
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[2639] | 16 | |
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| 17 | # Period Length In Days between DateBegin and first day of calendar 0001 01 01 |
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| 18 | # /!\ Needed by OPA namelist to compute file names /!\ |
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| 19 | (( DaysSinceJC = $( IGCM_date_DaysSinceJC ${DateBegin} ) + 1 )) |
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| 20 | |
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[2647] | 21 | (( OPA_NDT_DAY = 86400 / OPA_RDT )) |
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| 22 | |
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[2639] | 23 | # Definition from opa9.card of List_jobsbc and List_runsbc used to do to interannual and climatological runs |
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| 24 | IGCM_card_DefineArrayFromOption ${SUBMIT_DIR}/COMP/opa9.card Interannual List_jobsbc |
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| 25 | set -A ListFormulationJobsbc -- \${opa9_Interannual_Listjobsc${opa9_Interannual_List_jobsbc}[*]} |
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| 26 | |
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| 27 | IGCM_debug_PopStack "OCE_Initialize" |
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| 28 | } |
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| 29 | |
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| 30 | #----------------------------------------------------------------- |
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| 31 | function OCE_Update |
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| 32 | { |
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| 33 | IGCM_debug_PushStack "OCE_Update" |
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| 34 | |
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| 35 | # Interannual run |
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| 36 | # In this case job need to calculate previous and following year and give, and if every run needs to add "_y" before every year |
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| 37 | if [ X${opa9_UserChoices_Interannual_Run} = Xy ] ; then |
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| 38 | |
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| 39 | typeset file |
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| 40 | |
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| 41 | (( PeriodCumulPeriod = ${CumulPeriod} - 1 )) |
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| 42 | (( PeriodInitYear =${InitYear} + ${PeriodCumulPeriod} * ${PeriodLengthInYears} )) |
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| 43 | (( PeriodFinalYear =${InitYear} + ${PeriodLengthInYears}*${CumulPeriod} - 1 )) |
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| 44 | |
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| 45 | NbFileInter=${#opa9_Interannual_List_jobsbc[*]} |
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| 46 | (( NbFileInter_tot=${#opa9_Interannual_List_jobsbc[*]} * ${PeriodLengthInYears} )) |
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| 47 | (( i = 0 )) |
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| 48 | |
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| 49 | while [ ${year} -le ${PeriodFinalYear} ] ; do #copy in ONCE of ALL necessary files for all PeriodLength |
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| 50 | |
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| 51 | while [ $i -lt ${NbFileInter} ] ; do |
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| 52 | |
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| 53 | eval file=${opa9_Interannual_List_jobsbc[$i]} |
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| 54 | if [ X${year} = X${PeriodInitYear} ] ; then |
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| 55 | if [ ${month} -eq 01 ] ; then |
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| 56 | # if year-1 does not exist we create a file _noym1.nc copy of year |
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| 57 | eval jobsbc_file_ym1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year_m1}.nc |
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| 58 | if [ ! -f ${jobsbc_file_ym1} ] ; then |
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| 59 | eval jobsbc_file_ym1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year}.nc |
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| 60 | eval runsbc_file_ym1=${file}_noym1.nc |
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| 61 | else |
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| 62 | eval jobsbc_file_ym1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year_m1}.nc |
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| 63 | eval runsbc_file_ym1=${file}_y${year_m1}.nc |
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| 64 | fi |
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| 65 | |
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| 66 | IGCM_sys_Get ${jobsbc_file_ym1} ${runsbc_file_ym1} |
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| 67 | fi |
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| 68 | fi |
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| 69 | |
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| 70 | # download year |
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| 71 | eval jobsbc_file_y=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year}.nc |
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| 72 | eval runsbc_file_y=${file}_y${year}.nc |
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| 73 | |
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| 74 | if [ ! -f ${runsbc_file_y} ] ; then |
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| 75 | IGCM_sys_Get ${jobsbc_file_y} ${runsbc_file_y} |
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| 76 | fi |
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| 77 | |
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| 78 | # download (year+1) if it is last year of run |
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| 79 | if [ X${year} = X${PeriodFinalYear} ] ; then |
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| 80 | |
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| 81 | eval jobsbc_file_yp1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year_p1}.nc |
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| 82 | eval runsbc_file_yp1=${file}_y${year_p1}.nc |
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| 83 | |
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| 84 | if [ ! -f ${runsbc_file_yp1} ] ; then |
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| 85 | |
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| 86 | # if year+1 does not exist we create a file _noyp1.nc copy of year |
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| 87 | eval jobsbc_file_yp1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year_p1}.nc |
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| 88 | if [ ! -f ${jobsbc_file_yp1} ] ; then |
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| 89 | eval jobsbc_file_yp1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year}.nc |
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| 90 | eval runsbc_file_yp1=${file}_noyp1.nc |
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| 91 | else |
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| 92 | eval jobsbc_file_yp1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year_p1}.nc |
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| 93 | eval runsbc_file_yp1=${file}_y${year_p1}.nc |
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| 94 | fi |
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| 95 | IGCM_sys_Get ${jobsbc_file_yp1} ${runsbc_file_yp1} |
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| 96 | fi |
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| 97 | |
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| 98 | fi |
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| 99 | (( i = i + 1 )) |
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| 100 | |
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| 101 | done |
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| 102 | |
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| 103 | (( year = year + 1 )) |
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| 104 | |
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| 105 | (( i = 0 )) |
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| 106 | done |
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| 107 | |
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| 108 | # End interannual |
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| 109 | elif [ X${opa9_UserChoices_Interannual_Run} = Xn ] ; then |
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| 110 | # Climatological run |
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| 111 | typeset file |
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| 112 | |
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| 113 | eval NbFileInter=${#opa9_Interannual_List_jobsbc[*]} |
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| 114 | |
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| 115 | (( i = 0 )) |
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| 116 | while [ $i -lt ${NbFileInter} ] ; do |
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| 117 | eval file=${opa9_Interannual_List_jobsbc[$i]} |
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| 118 | eval jobsbc_file=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}.nc |
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| 119 | eval runsbc_file=${file}.nc |
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| 120 | |
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| 121 | IGCM_sys_Get ${jobsbc_file} ${runsbc_file} |
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| 122 | (( i = i + 1 )) |
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| 123 | done |
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| 124 | fi |
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| 125 | # End climatological |
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| 126 | |
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| 127 | # TEST year for EMPave_old.dat file |
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| 128 | # Needed if in namelist fwb=2 after firts year, because in EMPave_old.dat file first year is 0 |
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[2647] | 129 | # eval year_EMPave_old=`awk '{ print $1 }' ${RUN_DIR}/EMPave_old.dat` |
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| 130 | # (( PeriodCumulPeriod = ${CumulPeriod} - 1 )) |
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| 131 | # (( PeriodInitYear =${InitYear} + ${PeriodCumulPeriod} * ${PeriodLengthInYears} )) |
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| 132 | # echo "value year: X${year}" |
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| 133 | # echo "value PeriodInitYear: X${PeriodInitYear}" |
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[2639] | 134 | # if [ "${CumulPeriod}" -ne 1 ] ; then |
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| 135 | # if [ ${year_m1} = ${year_EMPave_old} ] ; then |
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| 136 | # echo "OK. Date in EMPave_old.dat ${year_EMPave_old} is equal to date in EMPave.dat minus 1 : ${year_m1}" |
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| 137 | # else |
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| 138 | # echo "NOT CORRECT. Date in EMPave_old.dat ${year_EMPave_old} is not equal to date in EMPave.dat minus 1: ${year_m1} exit." |
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| 139 | # exit |
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| 140 | # fi |
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| 141 | # fi |
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| 142 | # END OF TEST |
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| 143 | |
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| 144 | NbFreq=$( echo ${config_OCE_WriteFrequency} | wc -w ) |
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| 145 | ##--Write Frequency Purpose .... |
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| 146 | typeset -Z1 i=1 |
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| 147 | while [ $i -le ${NbFreq} ]; do |
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| 148 | frequency=$( echo ${config_OCE_WriteFrequency} | awk -v var="$i" "-F " '{print $var}' ) |
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[2719] | 149 | factor=$( echo ${frequency} | sed -e "s/[yYmMdDhH]//" ) |
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[2639] | 150 | |
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| 151 | case ${frequency} in |
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| 152 | *Y|*y) |
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| 153 | eval PREFIX_WF${i}=${config_UserChoices_JobName}_${factor}y_${DatesPeriod} ; |
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| 154 | eval R_OUT_OCE_WF${i}=${R_OUT_OCE_O_Y} ; |
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| 155 | eval WF${i}=${factor}Y ;; |
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| 156 | *M|*m) |
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| 157 | eval PREFIX_WF${i}=${config_UserChoices_JobName}_${factor}m_${DatesPeriod} ; |
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| 158 | eval R_OUT_OCE_WF${i}=${R_OUT_OCE_O_M} ; |
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| 159 | eval WF${i}=${factor}M ;; |
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| 160 | *D|*d) |
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| 161 | eval PREFIX_WF${i}=${config_UserChoices_JobName}_${factor}d_${DatesPeriod} ; |
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| 162 | eval R_OUT_OCE_WF${i}=${R_OUT_OCE_O_D} ; |
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| 163 | eval WF${i}=${factor}D ;; |
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[2719] | 164 | *H|*h) |
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| 165 | eval PREFIX_WF${i}=${config_UserChoices_JobName}_${factor}h_${DatesPeriod} ; |
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| 166 | eval R_OUT_OCE_WF${i}=${R_OUT_OCE_O_H} ; |
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| 167 | eval WF${i}=${factor}H ;; |
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[2639] | 168 | *) |
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| 169 | esac |
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| 170 | let i=$i+1 |
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| 171 | |
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| 172 | done |
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| 173 | # Period Length In Days between DateBegin and first day of calendar 0001 01 01 |
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| 174 | # Needed by OPA namelist to compute correct file names |
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| 175 | (( PeriodDaysSinceJC = $( IGCM_date_DaysSinceJC ${PeriodDateBegin} ) + 1 )) |
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| 176 | |
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| 177 | ## Count of number of time steps from begin of OPA job |
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| 178 | (( OPA_NIT000 = ( PeriodDaysSinceJC - DaysSinceJC ) * OPA_NDT_DAY + 1 )) |
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| 179 | (( OPA_NDT = PeriodLengthInDays * OPA_NDT_DAY )) |
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| 180 | (( OPA_NITEND = OPA_NIT000 + OPA_NDT - 1)) |
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| 181 | |
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| 182 | ## Forcing to write one restart file at the end of period |
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| 183 | OPA_NSTOCK="${OPA_NITEND}" |
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| 184 | |
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| 185 | ## Verification of number of time steps per day |
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| 186 | (( NB_SEC_DAY_MODEL = OPA_NDT_DAY * OPA_RDT )) |
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| 187 | (( NB_SEC_DAY = 60 * 60 * 24 )) |
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| 188 | |
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| 189 | if [ ${NB_SEC_DAY_MODEL} -ne ${NB_SEC_DAY} ] |
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| 190 | then |
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| 191 | echo " NB_SEC_DAY_MODEL "${NB_SEC_DAY_MODEL} "NB_SEC_DAY" ${NB_SEC_DAY} "OPA_NDT_DAY" ${OPA_NDT_DAY} "OPA_RDT" ${OPA_RDT} |
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| 192 | echo " VERIFY OPA_NDT_DAY in opa9.card " |
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| 193 | exit |
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| 194 | fi |
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| 195 | |
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| 196 | ##-- Restart configuration |
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| 197 | if ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_OCE_Restart}" = "n" ] ) ; then |
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| 198 | |
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| 199 | #echo "NO OPA RESTART" |
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| 200 | OPA_LRSTAR=.FALSE. |
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| 201 | OPA_NRSTDT=0 |
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| 202 | #Put OPA_NMSH=0 when OPA runnig in parallel mode |
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| 203 | OPA_NMSH=1 |
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[2655] | 204 | ( [ X${mpiTasks} != X ] && [ "${mpiTasks}" -gt 1 ] ) && OPA_NMSH=0 |
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[2639] | 205 | |
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| 206 | elif ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_OCE_Restart}" = "y" ] ) ; then |
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| 207 | |
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| 208 | #echo "OPA RESTART" |
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| 209 | OPA_LRSTAR=.TRUE. |
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[2718] | 210 | OPA_NRSTDT=0 |
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[2639] | 211 | OPA_NMSH=0 |
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| 212 | |
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| 213 | else |
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| 214 | |
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| 215 | #echo "OPA RESTART" |
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| 216 | OPA_LRSTAR=.TRUE. |
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| 217 | OPA_NRSTDT=2 |
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| 218 | OPA_NMSH=0 |
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| 219 | |
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| 220 | fi |
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| 221 | |
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| 222 | ## nleapy configuration |
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| 223 | case ${config_UserChoices_CalendarType} in |
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| 224 | leap) |
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| 225 | OPA_NLEAPY=1;; |
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| 226 | noleap) |
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| 227 | OPA_NLEAPY=0;; |
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| 228 | 360d) |
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| 229 | OPA_NLEAPY=30;; |
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| 230 | esac |
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| 231 | |
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| 232 | |
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| 233 | typeset -r PRECIS=8 |
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| 234 | NEMO_END=$( echo $( awk "BEGIN { printf \"%0${PRECIS}d\",${OPA_NITEND} }" ) ) |
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| 235 | |
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| 236 | IGCM_comp_modifyNamelist blocker namelist_cfg cn_exp ${config_UserChoices_JobName} |
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| 237 | IGCM_comp_modifyNamelist blocker namelist_cfg nn_it000 ${OPA_NIT000} |
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| 238 | IGCM_comp_modifyNamelist blocker namelist_cfg nn_itend ${OPA_NITEND} |
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| 239 | IGCM_comp_modifyNamelist blocker namelist_cfg ln_rstart ${OPA_LRSTAR} |
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| 240 | IGCM_comp_modifyNamelist blocker namelist_cfg nn_stock ${OPA_NSTOCK} |
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| 241 | IGCM_comp_modifyNamelist blocker namelist_cfg nn_rstctl ${OPA_NRSTDT} |
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| 242 | IGCM_comp_modifyNamelist blocker namelist_cfg nn_date0 ${PeriodDateBegin} |
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| 243 | IGCM_comp_modifyNamelist nonblocker namelist_cfg nn_msh ${OPA_NMSH} |
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| 244 | IGCM_comp_modifyNamelist blocker namelist_cfg nn_leapy ${OPA_NLEAPY} |
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| 245 | |
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[2647] | 246 | # update domain_def.xml file |
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| 247 | case ${RESOL_OCE} in |
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| 248 | ( *ORCA2* ) |
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| 249 | sed -e 's/<domain id="1point" zoom_ibegin="150" zoom_jbegin="150"/<domain id="1point" zoom_ibegin="10" zoom_jbegin="10"/' domain_def.xml > domain_def.xml.tmp |
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| 250 | IGCM_sys_Mv domain_def.xml.tmp domain_def.xml ; |
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| 251 | esac |
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[2639] | 252 | |
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| 253 | IGCM_debug_PopStack "OCE_Update" |
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| 254 | } |
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| 255 | |
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| 256 | #----------------------------------- |
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| 257 | function OCE_Finalize |
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| 258 | { |
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| 259 | IGCM_debug_PushStack "OCE_Finalize" |
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| 260 | |
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| 261 | if [ -f date.file ] ; then |
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| 262 | # Prefix use in opa.card AND in lim2.card : |
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| 263 | DATE_OPA=$( cat date.file | \ |
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| 264 | sed "s/\ ${config_UserChoices_JobName}_[0-9]*[a-z]_\([0-9]*_[0-9]*\)_\ */\1/g" ) |
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| 265 | ###DATE_OPA=$( $DATE_OPABF | cut -c1-30 ) |
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| 266 | MainPrefix=${config_UserChoices_JobName}_1d_${DATE_OPA} |
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| 267 | SecondPrefix=${config_UserChoices_JobName}_5d_${DATE_OPA} |
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| 268 | fi |
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| 269 | |
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| 270 | echo FINALIZE OCE !!! |
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| 271 | |
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| 272 | IGCM_debug_PopStack "OCE_Finalize" |
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| 273 | } |
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| 274 | |
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