source: CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/DRIVER/opa9.driver @ 2639

Last change on this file since 2639 was 2639, checked in by cetlod, 9 years ago

Add new NEMO configurations in v6
File size: 10.1 KB
Line 
1#!/bin/ksh
2#-----------------------------------------------------------------
3function OCE_Initialize
4{
5    IGCM_debug_PushStack "OCE_Initialize"
6
7    JOB_NAME=${config_UserChoices_JobName}
8
9#?? RESOL_OCE=$( echo $RESOL | awk "-Fx" '{print $2}' | awk "-F-" '{print $1}')
10#?? [ -f ${SUBMIT_DIR}/../.resol ] && eval $(grep RESOL_OCE_3D ${SUBMIT_DIR}/../.resol) || RESOL_OCE_3D=96x95x39
11
12    OPA_NDT_DAY=${opa9_UserChoices_OPA_NDT_DAY:=24}
13
14# Local function to find namelists parameters
15supergrep () {
16    grep "^ *$1 *=" $2 | sed -e "s% *\!.*%%"
17}
18
19    OPA_RDT=$( supergrep rn_rdt  ${SUBMIT_DIR}/PARAM/namelist_cfg | sed 's/ *rn_rdt *=//' | sed 's/\. *,//' )
20
21    # Period Length In Days between DateBegin and first day of calendar 0001 01 01
22    # /!\ Needed by OPA namelist to compute file names /!\
23    (( DaysSinceJC = $( IGCM_date_DaysSinceJC ${DateBegin} ) + 1 ))
24
25    # Definition from opa9.card of List_jobsbc and List_runsbc used to do to interannual and climatological runs
26        IGCM_card_DefineArrayFromOption ${SUBMIT_DIR}/COMP/opa9.card Interannual List_jobsbc
27        set -A ListFormulationJobsbc -- \${opa9_Interannual_Listjobsc${opa9_Interannual_List_jobsbc}[*]}
28
29    IGCM_debug_PopStack "OCE_Initialize"
30}
31
32#-----------------------------------------------------------------
33function OCE_Update
34{
35    IGCM_debug_PushStack "OCE_Update"
36
37    # Interannual run
38    # In this case job need to calculate previous and following year and give, and if every run needs to add "_y" before every year
39    if [ X${opa9_UserChoices_Interannual_Run} = Xy ] ; then
40
41        typeset file
42
43        (( PeriodCumulPeriod =  ${CumulPeriod} - 1 )) 
44        (( PeriodInitYear =${InitYear} + ${PeriodCumulPeriod} * ${PeriodLengthInYears} ))
45        (( PeriodFinalYear =${InitYear} + ${PeriodLengthInYears}*${CumulPeriod} - 1 ))
46
47        NbFileInter=${#opa9_Interannual_List_jobsbc[*]}
48        (( NbFileInter_tot=${#opa9_Interannual_List_jobsbc[*]} * ${PeriodLengthInYears} ))
49        (( i = 0 ))
50
51        while [ ${year} -le ${PeriodFinalYear} ] ; do #copy in ONCE of ALL necessary files for all PeriodLength
52           
53            while [ $i -lt ${NbFileInter} ] ; do
54               
55                eval file=${opa9_Interannual_List_jobsbc[$i]}
56                if [ X${year} = X${PeriodInitYear} ] ; then 
57                                if [ ${month} -eq 01 ] ; then
58                                        # if year-1 does not exist we create a file _noym1.nc copy of year
59                                        eval jobsbc_file_ym1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year_m1}.nc
60                                        if  [ ! -f ${jobsbc_file_ym1} ] ; then
61                                                eval jobsbc_file_ym1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year}.nc
62                                                eval runsbc_file_ym1=${file}_noym1.nc
63                                        else
64                                            eval jobsbc_file_ym1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year_m1}.nc
65                                            eval runsbc_file_ym1=${file}_y${year_m1}.nc
66                                        fi
67
68                            IGCM_sys_Get ${jobsbc_file_ym1} ${runsbc_file_ym1}
69                                fi
70                fi
71               
72                # download year
73                eval jobsbc_file_y=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year}.nc
74                eval runsbc_file_y=${file}_y${year}.nc
75               
76                if [ ! -f ${runsbc_file_y} ] ; then
77                    IGCM_sys_Get ${jobsbc_file_y} ${runsbc_file_y}
78                fi
79               
80                # download (year+1) if it is last year of run
81                if [ X${year} = X${PeriodFinalYear} ] ; then   
82       
83                    eval jobsbc_file_yp1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year_p1}.nc
84                    eval runsbc_file_yp1=${file}_y${year_p1}.nc
85                   
86                    if  [ ! -f ${runsbc_file_yp1} ] ; then
87                       
88                        # if year+1 does not exist we create a file _noyp1.nc copy of year
89                        eval jobsbc_file_yp1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year_p1}.nc
90                        if  [ ! -f ${jobsbc_file_yp1} ] ; then
91                            eval jobsbc_file_yp1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year}.nc
92                            eval runsbc_file_yp1=${file}_noyp1.nc
93                        else
94                            eval jobsbc_file_yp1=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}_${year_p1}.nc
95                            eval runsbc_file_yp1=${file}_y${year_p1}.nc
96                        fi
97                        IGCM_sys_Get ${jobsbc_file_yp1} ${runsbc_file_yp1}
98                    fi
99                   
100                fi
101                (( i = i + 1 ))
102       
103            done
104       
105            (( year = year + 1 ))
106         
107            (( i = 0 ))
108        done
109
110    # End interannual
111    elif [ X${opa9_UserChoices_Interannual_Run} = Xn ] ; then
112    # Climatological run
113       typeset file
114
115       eval NbFileInter=${#opa9_Interannual_List_jobsbc[*]}
116
117        (( i = 0 ))
118        while [ $i -lt ${NbFileInter} ] ; do
119            eval file=${opa9_Interannual_List_jobsbc[$i]}
120            eval jobsbc_file=${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/${file}.nc
121            eval runsbc_file=${file}.nc
122
123            IGCM_sys_Get ${jobsbc_file} ${runsbc_file}
124            (( i = i + 1 ))
125        done
126    fi
127    # End climatological
128   
129    # TEST year for EMPave_old.dat file
130    # Needed if in namelist fwb=2 after firts year, because in EMPave_old.dat file first year is 0
131    eval year_EMPave_old=`awk '{ print $1 }' ${RUN_DIR}/EMPave_old.dat`
132    (( PeriodCumulPeriod =  ${CumulPeriod} - 1 )) 
133    (( PeriodInitYear =${InitYear} + ${PeriodCumulPeriod} * ${PeriodLengthInYears} ))
134    echo "value year: X${year}"
135    echo "value PeriodInitYear: X${PeriodInitYear}"
136#    if [ "${CumulPeriod}" -ne 1 ] ; then
137#       if [ ${year_m1} = ${year_EMPave_old} ] ; then
138#               echo "OK. Date in EMPave_old.dat ${year_EMPave_old} is equal to date in EMPave.dat minus 1 : ${year_m1}"
139#       else
140#               echo "NOT CORRECT. Date in EMPave_old.dat ${year_EMPave_old} is not equal to date in EMPave.dat minus 1: ${year_m1} exit."
141#               exit
142#       fi
143#   fi
144    # END OF TEST
145
146    NbFreq=$( echo ${config_OCE_WriteFrequency} | wc -w )
147    ##--Write Frequency Purpose ....
148    typeset -Z1 i=1
149    while [ $i -le ${NbFreq} ]; do
150        frequency=$( echo ${config_OCE_WriteFrequency} | awk -v var="$i" "-F " '{print $var}' )
151        factor=$( echo ${frequency} | sed -e "s/[yYmMdD]//" )
152
153        case ${frequency} in
154            *Y|*y)
155                eval PREFIX_WF${i}=${config_UserChoices_JobName}_${factor}y_${DatesPeriod} ;
156                eval R_OUT_OCE_WF${i}=${R_OUT_OCE_O_Y} ;
157                eval WF${i}=${factor}Y ;;
158            *M|*m)
159                eval PREFIX_WF${i}=${config_UserChoices_JobName}_${factor}m_${DatesPeriod} ;
160                eval R_OUT_OCE_WF${i}=${R_OUT_OCE_O_M} ;
161                eval WF${i}=${factor}M ;;
162            *D|*d)
163                eval PREFIX_WF${i}=${config_UserChoices_JobName}_${factor}d_${DatesPeriod} ;
164                eval R_OUT_OCE_WF${i}=${R_OUT_OCE_O_D} ;
165                eval WF${i}=${factor}D ;;
166            *)
167        esac
168        let i=$i+1
169
170    done
171    # Period Length In Days between DateBegin and first day of calendar 0001 01 01
172    # Needed by OPA namelist to compute correct file names
173    (( PeriodDaysSinceJC =  $( IGCM_date_DaysSinceJC ${PeriodDateBegin} ) + 1  ))
174
175    ## Count of number of time steps from begin of OPA job
176    (( OPA_NIT000 = ( PeriodDaysSinceJC - DaysSinceJC ) * OPA_NDT_DAY + 1 ))
177    (( OPA_NDT   = PeriodLengthInDays * OPA_NDT_DAY ))
178    (( OPA_NITEND = OPA_NIT000 + OPA_NDT - 1))
179
180    ## Forcing to write one restart file at the end of period
181    OPA_NSTOCK="${OPA_NITEND}"
182
183    ## Verification of number of time steps per day
184    (( NB_SEC_DAY_MODEL = OPA_NDT_DAY * OPA_RDT ))
185    (( NB_SEC_DAY = 60 * 60 * 24 ))
186
187    if [ ${NB_SEC_DAY_MODEL} -ne ${NB_SEC_DAY} ]
188        then
189        echo " NB_SEC_DAY_MODEL "${NB_SEC_DAY_MODEL} "NB_SEC_DAY" ${NB_SEC_DAY} "OPA_NDT_DAY" ${OPA_NDT_DAY} "OPA_RDT" ${OPA_RDT}
190        echo " VERIFY OPA_NDT_DAY in opa9.card "
191        exit
192    fi
193
194    ##-- Restart configuration
195    if ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_OCE_Restart}" = "n" ] ) ; then
196
197        #echo "NO OPA RESTART"
198        OPA_LRSTAR=.FALSE.
199        OPA_NRSTDT=0
200        #Put OPA_NMSH=0 when OPA runnig in parallel mode
201        OPA_NMSH=1
202        ( [ X${BATCH_NUM_PROC_TOT} != X ] && [ "${BATCH_NUM_PROC_TOT}" -gt 1 ] ) && OPA_NMSH=0
203
204    elif ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_OCE_Restart}" = "y" ] ) ; then
205
206        #echo "OPA RESTART"
207        OPA_LRSTAR=.TRUE.
208        OPA_NRSTDT=1
209        OPA_NMSH=0
210
211    else
212
213        #echo "OPA RESTART"
214        OPA_LRSTAR=.TRUE.
215        OPA_NRSTDT=2
216        OPA_NMSH=0
217
218    fi
219   
220     ## nleapy configuration
221        case ${config_UserChoices_CalendarType} in
222                leap)
223                OPA_NLEAPY=1;;
224                noleap)
225                OPA_NLEAPY=0;;
226                360d)
227                OPA_NLEAPY=30;;
228        esac
229
230
231        typeset -r PRECIS=8
232        NEMO_END=$( echo $( awk "BEGIN { printf \"%0${PRECIS}d\",${OPA_NITEND} }" ) ) 
233
234   IGCM_comp_modifyNamelist blocker    namelist_cfg cn_exp    ${config_UserChoices_JobName}
235   IGCM_comp_modifyNamelist blocker    namelist_cfg nn_it000  ${OPA_NIT000}
236   IGCM_comp_modifyNamelist blocker    namelist_cfg nn_itend  ${OPA_NITEND}
237   IGCM_comp_modifyNamelist blocker    namelist_cfg ln_rstart ${OPA_LRSTAR}
238   IGCM_comp_modifyNamelist blocker    namelist_cfg nn_stock ${OPA_NSTOCK}
239   IGCM_comp_modifyNamelist blocker    namelist_cfg nn_rstctl ${OPA_NRSTDT}
240   IGCM_comp_modifyNamelist blocker    namelist_cfg nn_date0 ${PeriodDateBegin}
241   IGCM_comp_modifyNamelist nonblocker namelist_cfg nn_msh    ${OPA_NMSH}
242   IGCM_comp_modifyNamelist blocker    namelist_cfg nn_leapy  ${OPA_NLEAPY} 
243
244
245
246
247    # update xmlio_server.def
248
249#SF: commented for now, thinking at it for new version wityh xio server, sed in iodef.xml
250  #  if [ X${opa9_UserChoices_io_server} = Xy ] ; then
251  #      sed -e "s/${PAT_SERVER}/  using_server = .TRUE./" \
252  #      xmlio_server.def > xmlio_server.def.tmp
253  #      IGCM_sys_Mv xmlio_server.def.tmp xmlio_server.def
254  #  fi
255       
256    IGCM_debug_PopStack "OCE_Update"
257}
258
259#-----------------------------------
260function OCE_Finalize
261{
262    IGCM_debug_PushStack "OCE_Finalize"
263
264    if [ -f date.file ] ; then
265        # Prefix use in opa.card AND in lim2.card :
266        DATE_OPA=$( cat date.file | \
267            sed "s/\ ${config_UserChoices_JobName}_[0-9]*[a-z]_\([0-9]*_[0-9]*\)_\ */\1/g" )
268        ###DATE_OPA=$( $DATE_OPABF | cut -c1-30 )
269        MainPrefix=${config_UserChoices_JobName}_1d_${DATE_OPA}
270        SecondPrefix=${config_UserChoices_JobName}_5d_${DATE_OPA}
271    fi
272
273    echo FINALIZE OCE !!!
274
275    IGCM_debug_PopStack "OCE_Finalize"
276}
277
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