| 1 | #!/bin/bash |
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| 2 | # Default options |
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| 3 | # |
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| 4 | # |
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| 5 | # |
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| 6 | date |
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| 7 | #### 1 Set up the compiling options |
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| 8 | #### Define some directories |
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| 9 | submitdir=$( pwd ) |
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| 10 | modipsl=$submitdir/../.. |
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| 11 | arch_path=$submitdir/ARCH |
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| 12 | mysrc_path=$submitdir/SOURCES |
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| 13 | export ROOT=$modipsl/modeles/DYNAMICO |
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| 14 | #### Set default options |
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| 15 | # Resolution if compiling LMDZ in regular mode without DYNAMICO |
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| 16 | # Use for example following "./compile_icolmdzor.sh -regular_latlon 144x142x79" |
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| 17 | regular_latlon=no |
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| 18 | # Atmospheric resolution, for LMDZ/ORCHIDEE in regular mode |
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| 19 | resol_atm=144x142x79 |
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| 20 | # Oceanic resolution, for NEMO (ORCA2/ORCA1/ORCA025) |
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| 21 | resol_oce=ORCA1 |
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| 22 | # Version of ice model lim2/lim3 |
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| 23 | icemodel=lim3 |
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| 24 | # Coupled with ocean biogeochemistry (y/n) |
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| 25 | oceanbio=y |
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| 26 | # Version ESM CO2: CO2 interactif ocean/atmosphere (y/n) |
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| 27 | esmco2=n |
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| 28 | # Optimization mode |
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| 29 | # optmode=prod/dev/debug |
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| 30 | optmode=prod |
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| 31 | # Resolution if compiling LMDZ in regular mode without DYNAMICO |
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| 32 | # Use for example following "./compile_icolmdzor.sh -regular_latlon 144x142x79" |
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| 33 | regular_latlon=no |
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| 34 | # fcm_arch |
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| 35 | fcm_arch=default |
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| 36 | # Default values to be overritten |
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| 37 | parallel=mpi_omp |
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| 38 | export fcm_arch parallel xios |
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| 39 | full_flag="" |
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| 40 | full_nemo=n |
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| 41 | full_inca="" |
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| 42 | full_xios="" |
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| 43 | full_lmdz="" |
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| 44 | full_orch="" |
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| 45 | full_dyna="" |
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| 46 | |
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| 47 | # Default netcdf_lib is used for XIOS but can be change by argument |
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| 48 | netcdf_lib="" |
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| 49 | |
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| 50 | # Output text file for compilation of each component |
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| 51 | datestr=`LC_ALL=C date +"%Y%m%dT%H%M"` |
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| 52 | outfile=$submitdir/out_compile_ipslcm7.$datestr |
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| 53 | echo > $outfile |
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| 54 | echo; echo "Text output from compilation will be stored in file out_compile_ipslcm7.$datestr"; echo |
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| 55 | |
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| 56 | #### Read arguments |
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| 57 | # Loop over all arguments to modify default set up |
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| 58 | while (($# > 0)) ; do |
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| 59 | case $1 in |
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| 60 | "-h") cat <<end_help |
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| 61 | ######################################################################## |
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| 62 | # Usage of the script compile_ipslcm7.sh |
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| 63 | # |
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| 64 | ######################################################################## |
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| 65 | |
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| 66 | ./compile_ipslcm7.sh [Options] |
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| 67 | |
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| 68 | |
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| 69 | Options: [-full] Full recompilation of all components. This option can be added to all other options. |
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| 70 | [-cleannemo] Full recompilation of NEMO component only. |
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| 71 | [-regular_latlon] |
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| 72 | [-debug / -dev / -prod] Level of optimization. One of these can be added to all other compile options. Default: -prod. |
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| 73 | |
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| 74 | |
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| 75 | Example 1: Default compilation of IPSLCM7 for resolution LR |
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| 76 | (Resolution atmos: nbp40, ocean: ORCA1) |
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| 77 | ./compile_ipslcm7.sh |
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| 78 | |
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| 79 | Example 2: Default resoltuion (LR) compiled in debug mode |
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| 80 | ./compile_ipslcm7.sh -debug |
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| 81 | |
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| 82 | Example 3: Default compilation with full recompilation of all components. No clean is needed. |
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| 83 | ./compile_ipslcm7.sh -full |
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| 84 | |
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| 85 | Example 4: Compilation of LMDZ in regular lat-lon for dimension 144x142x79. |
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| 86 | The dimension can be changed to any other 3d dimension. DYNAMICO is also compiled as default. |
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| 87 | ./compile_ipslcm7.sh -regular_latlon 144x142x79 |
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| 88 | |
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| 89 | end_help |
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| 90 | exit;; |
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| 91 | |
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| 92 | "-parallel") parallel=$2 ; shift ; shift ;; |
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| 93 | "-arch") fcm_arch="$2" ; shift ; shift ;; |
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| 94 | "-debug") optmode=debug ; shift ;; |
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| 95 | "-dev") optmode=dev ; shift ;; |
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| 96 | "-prod") optmode=prod ; shift ;; |
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| 97 | "-regular_latlon") regular_latlon=yes ; resol_atm=$2 ; shift ; shift ;; |
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| 98 | "-full") full_flag="-full"; full_nemo=y ; full_xios="--full" ; full_lmdz="-full" ; full_orch="-full" ; shift ;; |
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| 99 | "-full_xios") full_xios="--full" ; shift ;; # Note only full_xios is using double dash: --full |
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| 100 | "-full_lmdz") full_lmdz="-full" ; shift ;; |
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| 101 | "-full_orch") full_orch="-full" ; shift ;; |
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| 102 | "-full_nemo") full_nemo=y ; shift ;; |
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| 103 | "-full_inca") full_inca="-clean"; shift ;; |
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| 104 | "-cleannemo") full_nemo=y ; shift ;; |
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| 105 | *) echo "unknown option "$1" , exiting..." ; exit |
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| 106 | esac |
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| 107 | done |
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| 108 | |
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| 109 | echo "Following options are set in current compiling:" >> $outfile |
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| 110 | echo " regular_latlon=$regular_latlon (if yes, then resol_atm=${resol_atm})" >> $outfile |
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| 111 | echo " resol_atm=${resol_atm}, resol_oce=${resol_oce}, icemodel=${icemodel}, oceanbio=${oceanbio}" >> $outfile |
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| 112 | echo " optmode = $optmode, parallel = $parallel, fcm_arch = $fcm_arch " >> $outfile |
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| 113 | echo " full_flag=$full_flag, full_xios=$full_xios, full_lmdz=$full_lmdz, full_orch=$full_orch, full_nemo=$full_nemo, full_dyna=$full_dyna" >> $outfile |
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| 114 | echo >> $outfile |
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| 115 | |
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| 116 | ### Read host dependent default values |
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| 117 | ### These variables will not be changed if they were set as argument |
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| 118 | ###./host.sh $host |
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| 119 | # Later : Following lines should be set in host.sh file |
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| 120 | # begin host.sh |
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| 121 | if [ $fcm_arch == default ] ; then |
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| 122 | # Find out current host and source specific paths and commands for the host |
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| 123 | case $( hostname -s ) in |
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| 124 | jean-zay*) |
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| 125 | fcm_arch=X64_JEANZAY;; |
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| 126 | irene170|irene171|irene190|irene191|irene192|irene193) |
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| 127 | fcm_arch=X64_IRENE;; |
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| 128 | irene172|irene173|irene194|irene195) |
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| 129 | fcm_arch=X64_IRENE-AMD;; |
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| 130 | asterix*|obelix*) |
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| 131 | fcm_arch=ifort_LSCE |
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| 132 | if [ "${parallel}" == "mpi_omp" ] ; then |
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| 133 | echo "Warning!! Currently at Obelix hybrid mode is not possible." |
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| 134 | echo " Option -parallel mpi_omp is now changed to -parallel mpi" |
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| 135 | echo "" |
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| 136 | parallel=mpi |
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| 137 | else |
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| 138 | echo "You used -parallel" $parallel |
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| 139 | fi ;; |
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| 140 | ciclad*|climserv*|loholt*|camelot*) |
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| 141 | fcm_arch=ifort_CICLAD;; |
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| 142 | *) |
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| 143 | echo Current host is not known. You must use option -arch to specify which architecuture files to use. |
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| 144 | echo Exit now. |
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| 145 | exit |
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| 146 | esac |
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| 147 | fi |
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| 148 | |
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| 149 | # Set a link to arch.env if arch-${fcm_arch}.env file exist for current fcm_arch. |
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| 150 | # The link arch.env is also set in config.card and will be used by libIGCM to ensure the same running environnement. |
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| 151 | if [ -f ARCH/arch-${fcm_arch}.env ] ; then |
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| 152 | echo >> $outfile |
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| 153 | echo "The file ARCH/arch-${fcm_arch}.env will now be sourced with modules needed for compilation for all components." |
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| 154 | echo "Note that this new environement might be kept after compilation." |
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| 155 | echo "If this is the case, source again your personal environment after compilation. " |
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| 156 | echo " Personal module list before sourcing of ARCH/arch.env file:" >> $outfile |
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| 157 | module list >> $outfile 2>&1 |
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| 158 | |
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| 159 | # Make a link to this file, to be used also in config.card |
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| 160 | rm -f ARCH/arch.env |
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| 161 | ln -s arch-${fcm_arch}.env ARCH/arch.env |
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| 162 | |
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| 163 | # Source the file |
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| 164 | source ARCH/arch.env >> $outfile 2>&1 |
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| 165 | echo >> $outfile |
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| 166 | echo " New module list after sourcing of ARCH/arch.env file:" >> $outfile |
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| 167 | module list >> $outfile 2>&1 |
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| 168 | fi |
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| 169 | |
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| 170 | #### 2 Do the compilation |
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| 171 | ## 2.1 Compile ioipsl |
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| 172 | cd $modipsl/modeles/IOIPSL |
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| 173 | echo; echo "NOW COMPILE IOIPSL" |
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| 174 | echo >> $outfile ; echo " NOW COMPILE IOIPSL" >> $outfile |
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| 175 | |
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| 176 | # Check if compilation with fcm is included in IOIPSL |
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| 177 | if [ ! -f makeioipsl_fcm ] ; then |
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| 178 | echo "The file makeiopsl_fcm do not exist. Probably this is not the right version of IOIPSL." |
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| 179 | echo "Version of IOIPSL with fcm compilation is needed to compile with this script. Stop now." |
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| 180 | exit |
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| 181 | fi |
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| 182 | |
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| 183 | echo ./makeioipsl_fcm -$optmode -parallel -arch ${fcm_arch} -arch_path $arch_path -j 8 $full_flag >> $outfile |
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| 184 | ./makeioipsl_fcm -$optmode -parallel -arch ${fcm_arch} -arch_path $arch_path -j 8 $full_flag >> $outfile 2>&1 |
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| 185 | # Test if compiling succeded |
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| 186 | if [[ $? != 0 ]] ; then |
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| 187 | echo "THERE IS A PROBLEM IN IOIPSL COMPILATION - STOP" |
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| 188 | exit |
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| 189 | fi |
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| 190 | |
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| 191 | ## 2.2 Compile oasis3-mct |
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| 192 | cd $modipsl/oasis3-mct/util/make_dir |
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| 193 | echo; echo "NOW COMPILE OASIS3-MCT" |
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| 194 | echo >> $outfile ; echo " NOW COMPILE OASIS3-MCT" >> $outfile |
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| 195 | cp $mysrc_path/OASIS3-MCT/make_${fcm_arch} make.inc |
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| 196 | |
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| 197 | echo make -f TopMakefileOasis3 >> $outfile |
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| 198 | make -f TopMakefileOasis3 >> $outfile 2>&1 |
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| 199 | |
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| 200 | |
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| 201 | ## 2.3 Compile xios |
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| 202 | cd $modipsl/modeles/XIOS |
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| 203 | echo; echo "NOW COMPILE XIOS" |
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| 204 | echo >> $outfile ; echo " NOW COMPILE XIOS" >> $outfile |
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| 205 | echo ./make_xios --use_oasis oasis3_mct --$optmode --arch $fcm_arch --arch_path $arch_path ${netcdf_lib} --job 4 $full_xios >> $outfile |
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| 206 | ./make_xios --use_oasis oasis3_mct --$optmode --arch $fcm_arch --arch_path $arch_path ${netcdf_lib} --job 4 $full_xios >> $outfile 2>&1 |
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| 207 | # Test if compiling succeded |
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| 208 | if [[ $? != 0 ]] ; then |
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| 209 | echo "THERE IS A PROBLEM IN XIOS COMPILATION - STOP" |
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| 210 | exit |
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| 211 | fi |
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| 212 | # Move executables to modipsl/bin |
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| 213 | if [ -f $modipsl/modeles/XIOS/bin/xios_server.exe ] ; then |
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| 214 | mv $modipsl/modeles/XIOS/bin/xios_server.exe $modipsl/bin/xios_server_${optmode}.exe |
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| 215 | else |
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| 216 | echo "THERE IS A PROBLEM IN XIOS COMPILATION EXECUTABLE MISSING - STOP" |
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| 217 | exit |
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| 218 | fi |
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| 219 | |
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| 220 | |
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| 221 | ## 2.4 Compile orchidee |
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| 222 | cd $modipsl/modeles/ORCHIDEE |
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| 223 | echo; echo "NOW COMPILE ORCHIDEE" |
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| 224 | echo >> $outfile ; echo " NOW COMPILE ORCHIDEE" >> $outfile |
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| 225 | |
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| 226 | # Check if the compilation of ORCHIDEE was previsouly interupted prematured. |
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| 227 | # In that case, the files fcm.bld.lock exist. If the file exist, it is here removed to avoid makeorchidee_fcm |
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| 228 | # to ask question and wait for interactivly answer from the user. |
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| 229 | if [ -f build/fcm.bld.lock ] ; then |
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| 230 | echo >> $outfile |
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| 231 | echo " WARNING!! The file ORCHIDEE/build/fcm.bld.lock exist. " >> $outfile |
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| 232 | echo " This means that the compilation is either currently on going in another terminal was previous interupted before the end." >> $outfile |
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| 233 | echo " The file will now be removed. " >> $outfile |
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| 234 | echo >> $outfile |
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| 235 | rm -f build/fcm.bld.lock |
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| 236 | fi |
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| 237 | |
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| 238 | echo ./makeorchidee_fcm -j 8 -xios -parallel $parallel -$optmode -arch ${fcm_arch} -arch_path $arch_path $full_orch >> $outfile |
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| 239 | ./makeorchidee_fcm -j 8 -xios -parallel $parallel -$optmode -arch ${fcm_arch} -arch_path $arch_path $full_orch >> $outfile 2>&1 |
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| 240 | # Test if compiling finished |
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| 241 | if [[ $? != 0 ]] ; then |
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| 242 | echo "THERE IS A PROBLEM IN ORCHIDEE COMPILATION - STOP" |
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| 243 | exit |
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| 244 | fi |
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| 245 | |
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| 246 | |
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| 247 | ## 2.5 Compile NEMO |
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| 248 | nemo_root=$modipsl/modeles/NEMOGCM/CONFIG |
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| 249 | if [ ${icemodel} == lim2 ] ; then |
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| 250 | addkeys="key_lim2_vp key_diahth key_oasis3" |
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| 251 | delkeys="key_nosignedzero key_mpp_rep" |
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| 252 | else |
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| 253 | addkeys="key_top key_pisces key_age key_cfc key_cpl_carbon_cycle key_gas key_oasis3" |
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| 254 | if [ ${oceanbio} == y ] ; then |
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| 255 | if [ ${esmco2} == y ] ; then |
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| 256 | delkeys="key_nosignedzero key_mpp_rep" |
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| 257 | else |
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| 258 | delkeys="key_nosignedzero key_mpp_rep key_cpl_carbon_cycle key_gas" |
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| 259 | fi |
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| 260 | else |
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| 261 | delkeys="key_nosignedzero key_mpp_rep key_top key_pisces key_cfc key_age key_cpl_carbon_cycle key_gas" |
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| 262 | fi |
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| 263 | fi |
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| 264 | |
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| 265 | if [ ${oceanbio} == n ] ; then |
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| 266 | echo; echo "NOW COMPILE NEMO. Resolution = ${resol_oce} with icemodel ${icemodel} and without PISCES" |
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| 267 | echo >> $outfile ; echo " NOW COMPILE NEMO. Resolution = ${resol_oce} with icemodel ${icemodel} and without PISCES" >> $outfile |
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| 268 | else |
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| 269 | echo; echo "NOW COMPILE NEMO. Resolution = ${resol_oce} with icemodel ${icemodel} and PISCES" |
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| 270 | echo >> $outfile ; echo " NOW COMPILE NEMO. Resolution = ${resol_oce} with icemodel ${icemodel} and PISCES" >> $outfile |
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| 271 | fi |
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| 272 | echo >> $outfile ; echo cd $nemo_root >> $outfile |
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| 273 | echo >> $outfile ; echo cp $modipsl/config/IPSLCM7/SOURCES/NEMO/arch-${fcm_arch}.fcm ../ARCH/. >> $outfile |
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| 274 | echo >> $outfile |
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| 275 | |
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| 276 | cd $nemo_root ; cp $mysrc_path/NEMO/arch-${fcm_arch}.fcm ../ARCH/. |
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| 277 | |
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| 278 | if [ ${resol_oce} == ORCA2 ] ; then cfg_wrk=ORCA2_LIM_PISCES ; fi |
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| 279 | if [ ${resol_oce} == ORCA1 ] ; then cfg_wrk=ORCA1_LIM3_PISCES ; fi |
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| 280 | if [ ${resol_oce} == ORCA025 ] ; then cfg_wrk=ORCA025_LIM3_PISCES ; fi |
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| 281 | |
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| 282 | echo cp $modipsl/config/IPSLCM7/SOURCES/NEMO/*.*90 $nemo_root/$cfg_wrk/MY_SRC/ >> $outfile |
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| 283 | echo >> $outfile |
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| 284 | cp $mysrc_path/NEMO/*.*90 $nemo_root/$cfg_wrk/MY_SRC/ |
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| 285 | |
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| 286 | if [ $full_nemo == y ] ; then |
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| 287 | # To make a full compilation, first make a clean to remove all files produced during previous compilation |
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| 288 | echo ./makenemo -m ${fcm_arch} -n $cfg_wrk clean >> $outfile |
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| 289 | echo >> $outfile |
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| 290 | ./makenemo -m ${fcm_arch} -n $cfg_wrk clean >> $outfile 2>&1 |
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| 291 | fi |
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| 292 | echo ./makenemo -m ${fcm_arch} -n $cfg_wrk -j16 add_key "$addkeys" del_key "$delkeys" >> $outfile |
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| 293 | echo >> $outfile |
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| 294 | ./makenemo -m ${fcm_arch} -n $cfg_wrk -j16 add_key "$addkeys" del_key "$delkeys" >> $outfile 2>&1 |
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| 295 | |
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| 296 | |
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| 297 | # Test if compiling finished |
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| 298 | if [[ $? != 0 ]] ; then |
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| 299 | echo "THERE IS A PROBLEM IN NEMO COMPILATION - STOP" |
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| 300 | exit |
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| 301 | fi |
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| 302 | |
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| 303 | echo >> $outfile |
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| 304 | echo "Move nemo executable to modipsl/bin" >> $outfile |
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| 305 | echo ls -lrt $nemo_root/$cfg_wrk/BLD/bin >> $outfile |
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| 306 | ls -lrt $nemo_root/$cfg_wrk/BLD/bin >> $outfile |
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| 307 | echo >> $outfile |
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| 308 | |
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| 309 | if [ -f $nemo_root/$cfg_wrk/BLD/bin/nemo.exe ] ; then |
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| 310 | if [ ${esmco2} == y ] ; then |
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| 311 | mv $nemo_root/$cfg_wrk/BLD/bin/nemo.exe $modipsl/bin/opa.ESMCO2_${resol_oce}_${optmode} |
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| 312 | else |
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| 313 | mv $nemo_root/$cfg_wrk/BLD/bin/nemo.exe $modipsl/bin/opa_${resol_oce}_${optmode} |
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| 314 | fi |
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| 315 | fi |
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| 316 | |
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| 317 | # Compile LMDZ |
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| 318 | cd $modipsl/modeles/LMDZ |
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| 319 | # Compile LMDZ as library to couple to DYNAMICO |
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| 320 | echo; echo "NOW COMPILE LMDZ FOR COUPLING TO DYNAMICO" |
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| 321 | echo >> $outfile ; echo " NOW COMPILE LMDZ FOR COUPLING TO DYNAMICO" >> $outfile |
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| 322 | |
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| 323 | # Temporary use of SOURCES/LMDZ to handle modifications needed by IPSLCM7 |
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| 324 | cp $mysrc_path/LMDZ/*.*90 libf/phylmd/. |
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| 325 | |
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| 326 | # Check if the compilation of LMDZ was previsouly interupted prematured. |
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| 327 | # In that case, the files dimension.h and .lock exist. If the files exist, they are here removed to avoid makelmdz_fcm |
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| 328 | # to ask question and wait for interactivly answer from the user. |
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| 329 | if [ -f libf/grid/dimensions.h ] || [ -f .lock ] ; then |
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| 330 | echo >> $outfile |
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| 331 | echo " WARNING!! The file LMDZ/libf/grid/dimension.h and/or the LMDZ/.lock exist. " >> $outfile |
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| 332 | echo " This means that the compilation is either currently on going in another terminal was previous interupted before the end." >> $outfile |
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| 333 | echo " The files dimension.h and .lock will now be removed. " >> $outfile |
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| 334 | echo >> $outfile |
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| 335 | rm -f libf/grid/dimensions.h |
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| 336 | rm -f .lock |
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| 337 | fi |
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| 338 | |
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| 339 | echo ./makelmdz_fcm -p lmd -c OMCT -rrtm true -$optmode -mem -parallel $parallel -libphy -v orchidee2.1 -io xios -arch $fcm_arch -j 8 $full_lmdz >> $outfile |
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| 340 | ./makelmdz_fcm -p lmd -c OMCT -rrtm true -$optmode -mem -parallel $parallel -libphy -v orchidee2.1 -io xios -arch $fcm_arch -j 8 $full_lmdz >> $outfile 2>&1 |
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| 341 | # Test if compiling finished |
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| 342 | if [[ $? != 0 ]] ; then |
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| 343 | echo "THERE IS A PROBLEM IN LMDZ PHYSICS COMPILATION - STOP" |
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| 344 | exit |
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| 345 | fi |
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| 346 | |
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| 347 | |
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| 348 | ## 2.5 Compile DYNAMICO |
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| 349 | cd $modipsl/modeles/DYNAMICO |
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| 350 | echo; echo "NOW COMPILE DYNAMICO " |
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| 351 | echo >> $outfile ; echo " NOW COMPILE DYNAMICO" >> $outfile |
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| 352 | |
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| 353 | echo ./make_icosa -$optmode -parallel $parallel -external_ioipsl -with_oasis -with_xios -arch $fcm_arch -arch_path $arch_path -job 8 $full_dyna >> $outfile |
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| 354 | ./make_icosa -$optmode -parallel $parallel -external_ioipsl -with_oasis -with_xios -arch $fcm_arch -arch_path $arch_path -job 8 $full_dyna >> $outfile 2>&1 |
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| 355 | # Test if compiling finished |
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| 356 | if [[ $? != 0 ]] ; then |
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| 357 | echo "THERE IS A PROBLEM IN DYNAMICO COMPILATION - STOP" |
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| 358 | exit |
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| 359 | fi |
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| 360 | |
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| 361 | ## 2.6 Compile interface ICOSA_LMDZ |
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| 362 | cd $modipsl/modeles/ICOSA_LMDZ |
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| 363 | echo; echo "NOW COMPILE ICOSA_LMDZ " |
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| 364 | echo >> $outfile ; echo " NOW COMPILE ICOSA_LMDZ" >> $outfile |
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| 365 | |
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| 366 | echo ./make_icosa_lmdz -nodeps -p lmd -$optmode -parallel $parallel -with_oasis -with_orchidee -arch ${fcm_arch} -arch_path ${arch_path} -job 8 $full_dyna >> $outfile |
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| 367 | ./make_icosa_lmdz -nodeps -p lmd -$optmode -parallel $parallel -with_oasis -with_orchidee -arch ${fcm_arch} -arch_path ${arch_path} -job 8 $full_dyna >> $outfile 2>&1 |
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| 368 | # Test if compiling finished |
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| 369 | if [[ $? != 0 ]] ; then |
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| 370 | echo "THERE IS A PROBLEM IN ICOSA_LMDZ COMPILATION - STOP" |
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| 371 | exit |
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| 372 | fi |
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| 373 | # Move executables to modipsl/bin |
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| 374 | if [ -f $modipsl/modeles/ICOSA_LMDZ/bin/icosa_lmdz.exe ] ; then |
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| 375 | mv $modipsl/modeles/ICOSA_LMDZ/bin/icosa_lmdz.exe $modipsl/bin/icosa_lmdz_${optmode}.exe |
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| 376 | else |
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| 377 | echo "THERE IS A PROBLEM IN ICOSA_LMDZ COMPILATION EXECUTABLE MISSING - STOP" |
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| 378 | exit |
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| 379 | fi |
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| 380 | |
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| 381 | |
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| 382 | |
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| 383 | ## 2.7 Compile LMDZ for regular latlon configuration |
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| 384 | if [ $regular_latlon = yes ] ; then |
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| 385 | |
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| 386 | cd $modipsl/modeles/LMDZ |
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| 387 | # Compile LMDZ regular lat-lon exectuable |
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| 388 | echo; echo "NOW COMPILE LMDZ REGULAR LAT-LON MODE. Resolution = ${resol_atm}" |
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| 389 | echo >> $outfile ; echo " NOW COMPILE LMDZ REGULAR LAT-LON MODE. Resolution = ${resol_atm}" >> $outfile |
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| 390 | |
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| 391 | # Check if the compilation of LMDZ was previsouly interupted prematured. |
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| 392 | # In that case, the files dimension.h and .lock exist. If the files exist, they are here removed to avoid makelmdz_fcm |
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| 393 | # to ask question and wait for interactivly answer from the user. |
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| 394 | if [ -f libf/grid/dimensions.h ] || [ -f .lock ] ; then |
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| 395 | echo >> $outfile |
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| 396 | echo " WARNING!! The file LMDZ/libf/grid/dimension.h and/or the LMDZ/.lock exist. " >> $outfile |
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| 397 | echo " This means that the compilation is either currently on going in another terminal was previous interupted before the end." >> $outfile |
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| 398 | echo " The files dimension.h and .lock will now be removed. " >> $outfile |
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| 399 | echo >> $outfile |
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| 400 | rm -f libf/grid/dimensions.h |
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| 401 | rm -f .lock |
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| 402 | fi |
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| 403 | echo ./makelmdz_fcm -d ${resol_atm} -c OMCT -p lmd -rrtm true -$optmode -mem -parallel $parallel -io xios -v orchidee2.1 -arch $fcm_arch -j 8 $full_lmdz gcm >> $outfile |
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| 404 | ./makelmdz_fcm -d ${resol_atm} -c OMCT -p lmd -rrtm true -$optmode -mem -parallel $parallel -io xios -v orchidee2.1 -arch $fcm_arch -j 8 $full_lmdz gcm >> $outfile 2>&1 |
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| 405 | # Test if compiling finished |
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| 406 | if [[ $? != 0 ]] ; then |
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| 407 | echo "THERE IS A PROBLEM IN LMDZ REGULAR LATLON COMPILATION - STOP" |
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| 408 | exit |
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| 409 | fi |
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| 410 | |
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| 411 | # Compile ce0l initialization program for LMDZ regular lat-lon exectuable |
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| 412 | echo; echo "NOW COMPILE CE0L OF LMDZ. Resolution = ${resol_atm}" |
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| 413 | echo >> $outfile ; echo " NOW COMPILE CE0L OF LMDZ. Resolution = ${resol_atm}" >> $outfile |
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| 414 | |
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| 415 | echo ./makelmdz_fcm -d ${resol_atm} -p lmd -rrtm true -$optmode -mem -parallel $parallel -io xios -v orchidee2.1 -arch $fcm_arch -j 8 $full_lmdz ce0l >> $outfile |
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| 416 | ./makelmdz_fcm -d ${resol_atm} -p lmd -rrtm true -$optmode -mem -parallel $parallel -io xios -v orchidee2.1 -arch $fcm_arch -j 8 $full_lmdz ce0l >> $outfile 2>&1 |
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| 417 | # Test if compiling finished |
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| 418 | if [[ $? != 0 ]] ; then |
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| 419 | echo "THERE IS A PROBLEM IN CE0L (LMDZ) REGULAR LATLON COMPILATION - STOP" |
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| 420 | exit |
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| 421 | fi |
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| 422 | |
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| 423 | # Find executable suffix |
|---|
| 424 | if [ $parallel == seq ] || [ $parallel == none ] ; then |
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| 425 | suffix=_${resol_atm}_phylmd_seq_orch.e |
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| 426 | else |
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| 427 | suffix=_${resol_atm}_phylmd_para_mem_orch.e |
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| 428 | fi |
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| 429 | echo gcm suffix = $suffix |
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| 430 | |
|---|
| 431 | # Move executables to modipsl/bin folder |
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| 432 | echo "Move gcm.e and ce0l executable to modipsl/bin" |
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| 433 | if [ -f $modipsl/modeles/LMDZ/bin/gcm${suffix} ] ; then |
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| 434 | mv $modipsl/modeles/LMDZ/bin/gcm${suffix} $modipsl/bin/gcm_${resol_atm}_${optmode}.e |
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| 435 | else |
|---|
| 436 | echo "ERROR gcm${suffix} executable does not exist." |
|---|
| 437 | echo "THERE IS A PROBLEM IN LMDZ REGULAR LATLON COMPILATION - STOP" |
|---|
| 438 | exit |
|---|
| 439 | fi |
|---|
| 440 | |
|---|
| 441 | if [ -f $modipsl/modeles/LMDZ/bin/ce0l${suffix} ] ; then |
|---|
| 442 | mv $modipsl/modeles/LMDZ/bin/ce0l${suffix} $modipsl/bin/ce0l_${resol_atm}_${optmode}.e |
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| 443 | else |
|---|
| 444 | echo "ERROR ce0l${suffix} executable does not exist." |
|---|
| 445 | echo "THERE IS A PROBLEM IN LMDZ REGULAR LATLON COMPILATION - STOP" |
|---|
| 446 | exit |
|---|
| 447 | fi |
|---|
| 448 | fi |
|---|
| 449 | |
|---|
| 450 | echo >>$outfile ; echo "ALL COMPILING FINISHED" >> $outfile |
|---|
| 451 | echo ls -lrt modipsl/bin >> $outfile |
|---|
| 452 | ls -lrt $modipsl/bin >> $outfile |
|---|
| 453 | |
|---|
| 454 | echo; echo "ALL COMPILING FINISHED" ; echo |
|---|
| 455 | echo "Executables are found in modipsl/bin" |
|---|
| 456 | echo "Check that executable names correspond with the name set in config.card before launching the job" |
|---|
| 457 | echo ls -lrt modipsl/bin |
|---|
| 458 | ls -lrt $modipsl/bin |
|---|
| 459 | |
|---|
| 460 | date |
|---|
| 461 | |
|---|
| 462 | exit |
|---|
| 463 | |
|---|
| 464 | |
|---|
