1 | #!/usr/bin/env python |
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2 | # -*- coding: utf-8 -*- |
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3 | |
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4 | # ==================================================================== # |
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5 | # Author: Sonia Labetoulle # |
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6 | # Contact: sonia.labetoulle _at_ ipsl.jussieu.fr # |
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7 | # Created: 2016 # |
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8 | # History: # |
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9 | # Modification: # |
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10 | # ==================================================================== # |
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11 | |
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12 | # this must come first |
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13 | from __future__ import print_function, unicode_literals, division |
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14 | |
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15 | # standard library imports |
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16 | import socket |
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17 | import os |
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18 | import os.path |
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19 | import glob |
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20 | import shutil |
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21 | import subprocess |
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22 | import datetime as dt |
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23 | import numpy as np |
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24 | import ConfigParser as cp |
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25 | |
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26 | # Application library imports |
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27 | |
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28 | |
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29 | ######################################################################## |
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30 | def dods_cp(img_out, img_name, DODS): |
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31 | """ |
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32 | """ |
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33 | if not DODS["DIR"]: |
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34 | print("DODS directory not defined") |
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35 | return |
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36 | |
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37 | # .. Copy pdf file to dods server .. |
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38 | # ================================== |
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39 | command = [ |
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40 | "scp", |
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41 | img_out, |
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42 | "{}@{}:{}".format( |
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43 | DODS["USER"], |
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44 | DODS["SERVER"], |
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45 | os.path.join(DODS["DIR"], "pdf", img_name + ".pdf") |
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46 | ) |
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47 | ] |
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48 | try : |
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49 | subprocess.call(command) |
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50 | except Exception as rc : |
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51 | print("Error in scp for {}:\n{}".format(command, rc)) |
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52 | |
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53 | # .. Convert pdf to temporary png .. |
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54 | # ================================== |
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55 | img_png = img_out.replace(".pdf", ".png") |
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56 | command = ["convert", "-density", "200", img_out, img_png] |
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57 | |
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58 | try : |
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59 | subprocess.call(command) |
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60 | except Exception as rc : |
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61 | print("Error in convert for {}:\n{}".format(fileout, rc)) |
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62 | |
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63 | # .. Copy png file to dods server .. |
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64 | # ================================== |
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65 | command = [ |
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66 | "scp", |
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67 | img_png, |
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68 | "{}@{}:{}".format( |
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69 | DODS["USER"], |
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70 | DODS["SERVER"], |
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71 | os.path.join(DODS["DIR"], "img", img_name + ".png") |
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72 | ) |
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73 | ] |
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74 | try : |
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75 | subprocess.call(command) |
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76 | except Exception as rc : |
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77 | print("Error in scp for {}:\n{}".format(command, rc)) |
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78 | |
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79 | # .. Delete temporary png file .. |
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80 | # =============================== |
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81 | |
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82 | return |
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83 | |
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84 | basefile = os.path.basename(filein) |
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85 | |
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86 | fileout = os.path.join(DIR["DODS"], basefile) |
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87 | filepng = os.path.join(DIR["DODS"], "img", basefile.split(".")[0] + ".png") |
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88 | |
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89 | #Â Copy file |
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90 | shutil.copy(filein, fileout) |
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91 | |
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92 | # Convert it to png for web page |
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93 | command = ["convert", "-density", "200", fileout, filepng] |
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94 | |
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95 | try : |
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96 | subprocess.call(command) |
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97 | except Exception as rc : |
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98 | print("Error in convert for {}:\n{}".format(fileout, rc)) |
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99 | |
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100 | return |
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101 | |
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102 | |
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103 | ######################################################################## |
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104 | def parse_config(filename): |
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105 | |
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106 | DIR = {} |
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107 | DODS = {} |
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108 | |
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109 | config = cp.ConfigParser(allow_no_value=True) |
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110 | config.optionxform = str |
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111 | config.read(filename) |
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112 | |
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113 | for section in ("projet", "directories"): |
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114 | if not config.has_section(section): |
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115 | print("Missing section {} in {}, we stop".format(section, filename)) |
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116 | exit(1) |
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117 | |
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118 | # ... Project name ... |
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119 | # -------------------- |
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120 | section = "projet" |
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121 | option = "name" |
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122 | project_name = config.get(section, option) |
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123 | |
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124 | # ... Common directories ... |
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125 | # -------------------------- |
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126 | section = "directories" |
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127 | for option in config.options(section): |
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128 | DIR[option] = config.get(section, option) |
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129 | |
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130 | if DIR[option] and not os.path.isdir(DIR[option]): |
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131 | print("mkdir {}".format(DIR[option])) |
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132 | try : |
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133 | os.makedirs(DIR[option]) |
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134 | except Exception as rc : |
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135 | print("Could not create {}:\n{}".format(DIR[option], rc)) |
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136 | |
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137 | # .. DODS configuration ... |
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138 | # ------------------------- |
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139 | section = "dods" |
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140 | for option in config.options(section): |
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141 | DODS[option] = config.get(section, option) |
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142 | |
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143 | return (DIR, DODS) |
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144 | |
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145 | |
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146 | ######################################################################## |
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147 | def string_to_percent(x): |
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148 | """ |
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149 | """ |
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150 | return float(x.strip("%"))/100. |
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151 | |
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152 | |
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153 | ######################################################################## |
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154 | def string_to_size_unit(x): |
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155 | """ |
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156 | """ |
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157 | if unicode(x).isdecimal(): |
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158 | x = x + "o" |
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159 | |
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160 | (size, unit) = (float(x[:-1]), x[-1]) |
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161 | |
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162 | return SizeUnit(size, unit) |
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163 | |
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164 | |
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165 | ######################################################################## |
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166 | def string_to_float(x): |
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167 | """ |
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168 | """ |
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169 | return float(x.strip("h")) |
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170 | |
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171 | |
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172 | ######################################################################## |
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173 | def string_to_date(ssaammjj, fmt="%Y%m%d"): |
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174 | """ |
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175 | """ |
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176 | fmts = ["%Y%m%d", "%Y-%m-%d", "%Y_%m_%d"] |
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177 | |
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178 | for fmt in fmts: |
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179 | try: |
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180 | res = dt.datetime.strptime(ssaammjj, fmt) |
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181 | except Exception as rc: |
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182 | pass |
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183 | else: |
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184 | break |
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185 | |
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186 | return res.date() |
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187 | |
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188 | |
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189 | ######################################################################## |
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190 | def string_to_datetime(string, fmt="%Y-%m-%d-%H:%M"): |
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191 | """ |
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192 | """ |
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193 | return dt.datetime.strptime(string, fmt) |
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194 | |
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195 | |
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196 | # ######################################################################## |
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197 | # def date_to_string(dtdate, fmt="%Y-%m-%d"): |
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198 | # """ |
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199 | # """ |
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200 | # return dt.datetime.strftime(dtdate, fmt) |
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201 | |
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202 | |
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203 | ######################################################################## |
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204 | def where_we_run(): |
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205 | |
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206 | res = "" |
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207 | if "curie" in socket.getfqdn(): |
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208 | res = "curie" |
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209 | elif "ipsl" in socket.getfqdn(): |
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210 | res = "ipsl" |
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211 | else: |
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212 | res = "default" |
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213 | |
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214 | return res |
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215 | |
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216 | |
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217 | ######################################################################## |
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218 | def get_last_file(dir_data, pattern): |
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219 | """ |
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220 | """ |
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221 | current_dir = os.getcwd() |
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222 | os.chdir(dir_data) |
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223 | filename = pattern + "*" |
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224 | file_list = glob.glob(os.path.join(dir_data, filename)) |
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225 | if file_list: |
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226 | res = sorted(file_list)[-1] |
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227 | else: |
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228 | res = None |
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229 | os.chdir(current_dir) |
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230 | return res |
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231 | |
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232 | |
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233 | ######################################################################## |
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234 | def get_input_files(dir_data, file_list): |
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235 | """ |
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236 | """ |
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237 | res = [] |
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238 | |
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239 | for filename in file_list: |
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240 | res.append(get_last_file(dir_data, filename)) |
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241 | |
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242 | if None in res: |
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243 | print("\nMissing one or more input files, we stop.") |
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244 | for f_in, f_out in zip(file_list, res): |
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245 | print("=> {}: {}".format(f_in, f_out)) |
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246 | exit(1) |
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247 | |
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248 | return res |
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249 | |
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250 | |
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251 | ######################################################################## |
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252 | def plot_save(img_out, title): |
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253 | """ |
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254 | """ |
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255 | from matplotlib.backends.backend_pdf import PdfPages |
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256 | |
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257 | dpi = 200. |
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258 | |
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259 | dirname = os.path.dirname(img_out) |
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260 | if not os.path.isdir(dirname): |
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261 | print("mkdir {}".format(dirname)) |
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262 | try : |
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263 | os.makedirs(dirname) |
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264 | except Exception as rc : |
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265 | print("Could not create {}:\n{}".format(dirname, rc)) |
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266 | |
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267 | with PdfPages(img_out) as pdf: |
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268 | pdf.savefig(dpi=dpi) |
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269 | |
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270 | # ... pdf file's metadata ... |
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271 | # --------------------------- |
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272 | d = pdf.infodict() |
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273 | d["Title"] = title |
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274 | d["Author"] = os.path.basename(__file__) |
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275 | # d["Subject"] = "Time spent over specific commands during create_ts \ |
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276 | # jobs at IDRIS and four configurations at TGCC" |
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277 | # d["Keywords"] = "bench create_ts TGCC IDRIS ncrcat" |
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278 | # d["CreationDate"] = dt.datetime(2009, 11, 13) |
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279 | # d["ModDate"] = dt.datetime.today() |
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280 | |
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281 | |
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282 | ######################################################################## |
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283 | class AllocItem(object): |
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284 | |
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285 | #--------------------------------------------------------------------- |
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286 | def __init__( |
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287 | self, |
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288 | alloc_id, |
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289 | machine, |
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290 | node_type, |
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291 | start_date, |
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292 | end_date, |
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293 | alloc |
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294 | ): |
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295 | |
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296 | self.alloc_id = alloc_id |
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297 | self.machine = machine |
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298 | self.node_type = node_type |
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299 | self.start_date = start_date |
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300 | self.end_date = end_date |
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301 | self.alloc = alloc |
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302 | |
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303 | delta = self.end_date - self.start_date |
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304 | self.days = delta.days + 1 |
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305 | |
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306 | self.daily_conso = self.alloc / self.days |
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307 | |
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308 | #--------------------------------------------------------------------- |
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309 | def __repr__(self): |
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310 | return "{} ({:%Y%m%d}/{:%Y%m%d}): {}".format( |
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311 | self.machine, |
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312 | self.start_date, |
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313 | self.end_date, |
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314 | self.alloc, |
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315 | ) |
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316 | |
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317 | |
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318 | ######################################################################## |
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319 | class Project(object): |
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320 | |
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321 | #--------------------------------------------------------------------- |
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322 | def __init__(self, project_name, center): |
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323 | self.project = project_name |
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324 | self.centre = center |
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325 | self.alloc_items = [] |
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326 | |
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327 | #--------------------------------------------------------------------- |
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328 | def __repr__(self): |
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329 | return "{}/{}: {}".format( |
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330 | self.project, |
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331 | self.centre, |
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332 | self.alloc_items, |
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333 | ) |
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334 | |
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335 | #--------------------------------------------------------------------- |
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336 | def add_alloc( |
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337 | self, |
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338 | alloc_id, |
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339 | machine, |
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340 | node_type, |
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341 | start_date, |
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342 | end_date, |
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343 | alloc |
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344 | ): |
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345 | |
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346 | alloc_item = AllocItem( |
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347 | alloc_id, |
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348 | machine, |
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349 | node_type, |
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350 | start_date, |
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351 | end_date, |
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352 | alloc |
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353 | ) |
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354 | |
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355 | self.alloc_items.append(alloc_item) |
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356 | |
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357 | self.start_date = min( |
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358 | [item.start_date for item in self.alloc_items] |
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359 | ) |
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360 | self.end_date = max( |
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361 | [item.end_date for item in self.alloc_items] |
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362 | ) |
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363 | |
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364 | self.alloc = sum( |
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365 | [item.alloc for item in self.alloc_items] |
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366 | ) |
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367 | self.max_daily_conso = max( |
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368 | [item.daily_conso for item in self.alloc_items] |
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369 | ) |
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370 | |
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371 | |
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372 | self.days = sum( |
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373 | [item.days for item in self.alloc_items] |
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374 | ) |
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375 | |
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376 | self.nb_alloc = len(self.alloc_items) |
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377 | |
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378 | #--------------------------------------------------------------------- |
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379 | def get_theo_eq(self, dates): |
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380 | |
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381 | x0 = 0 |
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382 | y0 = 0. |
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383 | |
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384 | for item in self.alloc_items: |
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385 | yi = y0 |
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386 | yf = y0 + item.alloc / self.alloc |
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387 | |
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388 | if item.start_date.date() in dates: |
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389 | xi = dates.index(item.start_date.date()) |
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390 | else: |
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391 | xi = 0 |
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392 | |
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393 | if item.end_date.date() in dates: |
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394 | xf = dates.index(item.end_date.date()) |
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395 | else: |
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396 | xf = len(dates) + 1 |
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397 | |
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398 | m = np.array([[xi, 1.], [xf+1, 1.]]) |
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399 | n = np.array([yi, yf]) |
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400 | |
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401 | try: |
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402 | polynome = np.poly1d(np.linalg.solve(m, n)) |
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403 | except np.linalg.linalg.LinAlgError: |
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404 | print("error poly") |
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405 | item.theo_eq = None |
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406 | else: |
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407 | item.theo_eq = polynome |
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408 | item.xi = xi |
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409 | item.xf = xf |
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410 | item.yi = yi |
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411 | item.yf = yf |
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412 | |
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413 | y0 = yf |
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414 | |
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415 | #--------------------------------------------------------------------- |
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416 | def fill_data(self, row): |
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417 | # self.id = row["id"] |
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418 | # self.machine = row["machine"] |
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419 | # self.node = row["node_type"] |
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420 | # self.start_date = row["start_date"] |
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421 | # self.end_date = row["end_date"] |
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422 | # self.alloc = row["total_hrs"] |
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423 | |
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424 | delta = self.end_date - self.start_date |
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425 | self.days = delta.days + 1 |
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426 | |
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427 | |
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428 | ######################################################################## |
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429 | class SizeUnit(object): |
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430 | #--------------------------------------------------------------------- |
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431 | def __init__(self, size, unit): |
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432 | self.size = size |
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433 | self.unit = unit |
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434 | |
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435 | #--------------------------------------------------------------------- |
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436 | def __repr__(self): |
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437 | return "{:6.2f}{}o".format(self.size, self.unit) |
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438 | |
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439 | #--------------------------------------------------------------------- |
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440 | def convert_size(self, unit_out): |
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441 | """ |
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442 | """ |
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443 | prefixes = ["o", "K", "M", "G", "T", "P", "H"] |
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444 | |
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445 | if not self.size or \ |
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446 | self.unit == unit_out: |
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447 | size_out = self.size |
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448 | else: |
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449 | idx_deb = prefixes.index(self.unit) |
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450 | idx_fin = prefixes.index(unit_out) |
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451 | size_out = self.size |
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452 | for i in xrange(abs(idx_fin-idx_deb)): |
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453 | if idx_fin > idx_deb: |
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454 | size_out = size_out / 1024 |
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455 | else: |
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456 | size_out = size_out * 1024 |
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457 | |
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458 | return SizeUnit(size_out, unit_out) |
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459 | |
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460 | |
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461 | ######################################################################## |
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462 | if __name__ == '__main__': |
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463 | pass |
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