| 1 | #!/bin/bash |
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| 2 | set -e |
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| 3 | set -x |
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| 4 | |
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| 5 | |
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| 6 | InDir=. |
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| 7 | |
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| 8 | ncks -h -O -4 ${InDir}/cerfacs_grids.nc cerfacs_grids_netcdf4.nc |
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| 9 | ncks -4 -h -O -v nogh.lon,nogh.lat,nogh.clo,nogh.cla cerfacs_grids_netcdf4.nc ORCA025_coordinates_mask.nc |
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| 10 | ncrename -h -v nogh.lon,nav_lon_grid_T ORCA025_coordinates_mask.nc |
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| 11 | ncrename -h -v nogh.lat,nav_lat_grid_T ORCA025_coordinates_mask.nc |
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| 12 | ncrename -h -v nogh.clo,bounds_lon_grid_T ORCA025_coordinates_mask.nc |
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| 13 | ncrename -h -v nogh.cla,bounds_lat_grid_T ORCA025_coordinates_mask.nc |
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| 14 | |
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| 15 | ncks -h -O -4 ${InDir}/cerfacs_masks.nc cerfacs_masks_netcdf4.nc |
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| 16 | ncks -4 -h -A -v nogh.msk cerfacs_masks_netcdf4.nc ORCA025_coordinates_mask.nc |
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| 17 | ncrename -h -v nogh.msk,mask_T ORCA025_coordinates_mask.nc |
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| 18 | |
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| 19 | ncks -h -O -4 ${InDir}/cerfacs_areas.nc cerfacs_areas_netcdf4.nc |
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| 20 | ncks -4 -h -A -v nogh.srf cerfacs_areas_netcdf4.nc ORCA025_coordinates_mask.nc |
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| 21 | ncrename -h -v nogh.srf,area ORCA025_coordinates_mask.nc |
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| 22 | |
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| 23 | ncatted -h \ |
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| 24 | -a history,global,d,c,"" \ |
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| 25 | -a history_of_appended_files,global,d,c,"" \ |
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| 26 | ORCA025_coordinates_mask.nc |
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| 27 | |
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| 28 | ncpdq -O -h --permute nj,ni,jpcr ORCA025_coordinates_mask.nc tmp_ORCA025_coordinates_mask.nc ; mv tmp_ORCA025_coordinates_mask.nc ORCA025_coordinates_mask.nc |
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| 29 | |
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| 30 | ncrename -d jpcr,nvertex_grid_T ORCA025_coordinates_mask.nc |
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| 31 | ncrename -d ni,x_grid_T ORCA025_coordinates_mask.nc |
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| 32 | ncrename -d nj,y_grid_T ORCA025_coordinates_mask.nc |
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| 33 | |
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| 34 | #ncks -4 -O -h ORCA025_coordinates_mask.nc tmp_ORCA025_coordinates_mask.nc ; mv tmp_ORCA025_coordinates_mask.nc ORCA025_coordinates_mask.nc |
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| 35 | |
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| 36 | ncatted -h \ |
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| 37 | -a bounds,nav_lon_grid_T,c,c,"bounds_lon_grid_T" \ |
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| 38 | -a bounds,nav_lat_grid_T,c,c,"bounds_lat_grid_T" \ |
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| 39 | -a units,nav_lon_grid_T,c,c,"degrees_east" \ |
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| 40 | -a standard_name,nav_lon_grid_T,c,c,"Longitude" \ |
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| 41 | -a long_name,nav_lon_grid_T,c,c,"Longitude" \ |
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| 42 | -a units,nav_lat_grid_T,c,c,"degrees_north" \ |
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| 43 | -a standard_name,nav_lat_grid_T,c,c,"Latitude" \ |
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| 44 | -a long_name,nav_lat_grid_T,c,c,"Latitude" \ |
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| 45 | -a long_name,area,c,c,"Grid area" \ |
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| 46 | -a units,area,c,c,"m^2" \ |
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| 47 | -a online_operation,area,c,c,"once" \ |
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| 48 | -a coordinates,area,c,c,"nav_lat_grid_T nav_lon_grid_T" \ |
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| 49 | ORCA025_coordinates_mask.nc |
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| 50 | |
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| 51 | cat <<EOF > add_mask.nco |
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| 52 | mask_T = 1.0d - mask_T ; |
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| 53 | maskutil_T [y_grid_T,x_grid_T] = mask_T(:,:) ; |
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| 54 | maskutil_T ( : , 0) = 0.0d ; |
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| 55 | maskutil_T ( : , 1441) = 0.0d ; |
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| 56 | maskutil_T ( 1049, : ) = 0.0d ; |
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| 57 | maskutil_T ( 1048, 740:1441) = 0.0d ; |
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| 58 | EOF |
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| 59 | |
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| 60 | ncap2 -O -h -S add_mask.nco ORCA025_coordinates_mask.nc tmp_ORCA025_coordinates_mask.nc ; mv tmp_ORCA025_coordinates_mask.nc ORCA025_coordinates_mask.nc |
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| 61 | ncatted -h \ |
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| 62 | -a coordinates,mask_T,c,c,"nav_lat_grid_T nav_lon_grid_T" \ |
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| 63 | -a coordinates,maskutil_T,c,c,"nav_lat_grid_T nav_lon_grid_T" \ |
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| 64 | ORCA025_coordinates_mask.nc |
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| 65 | |
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| 66 | |
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| 67 | |
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| 68 | |
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