[1709] | 1 | #!/bin/bash |
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| 2 | |
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| 3 | |
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| 4 | #on veut archiver les fichiers restart |
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| 5 | #Dans le cadre du demenagement ils seront renommes |
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| 6 | #ATM/Restart/****.nc |
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| 7 | #OCE/Restart/****.nc |
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| 8 | #... |
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| 9 | #sous la forme |
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| 10 | #RESTART/ATM_****.nc |
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| 11 | #RESTART/OCE_****.nc |
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| 12 | #Attention de bien conserver les dates d'origines |
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| 13 | # |
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| 14 | #Dans le cadre de la production nouvelle chaine |
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| 15 | #ils auront directement le bon nom |
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| 16 | # |
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| 17 | #On veut egalement que l'archive soit par periode de temps |
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| 18 | # cette periode est definie par la taille du pack donc connue |
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| 19 | # en entree du script (1M, 1Y, 5Y, 10Y etc...) |
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| 20 | # |
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| 21 | |
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| 22 | |
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| 23 | # $1= PATH/config_card d'une simulation avec |
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| 24 | # TagName/JobName/ExperimentName/SpaceName/DateBegin/DateEnd/PATH_SIMUL |
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| 25 | # $2=period_pack en M/m ou Y/y |
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| 26 | |
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| 27 | config_card=${1} |
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| 28 | LISTE_DMNFS=${2} |
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| 29 | |
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| 30 | |
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[1900] | 31 | export JOB_DIR=${JOB_DIR:-${TMP_MIGR_DATA}} |
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[1709] | 32 | export IGCM_DEM=${IGCM_DEM:-${SCRATCHDIR}/IGCM_DEM} |
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| 33 | export IGCM_TMP=${IGCM_TMP:-${IGCM_DEM}/tmp} |
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| 34 | mkdir -p ${IGCM_DEM} |
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| 35 | mkdir -p ${IGCM_TMP} |
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| 36 | clean_tmp=${clean_tmp:-yes} |
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| 37 | EXE_DIR=$(dirname ${0}) |
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| 38 | SCRIPT_NAME=$(basename ${0} ) |
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| 39 | |
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| 40 | source ${EXE_DIR}/DEM_utilities.sh |
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| 41 | |
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[1822] | 42 | # gpdebug : verif si le present script a ete execute jusqu'au bout ######### |
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| 43 | MonitoringInfo="${SCRIPT_NAME}-->OK" |
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| 44 | simuMonitoring_check "$MonitoringInfo" "$config_card" |
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| 45 | |
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[1709] | 46 | DEM_log -0 "Demarrage de ${SCRIPT_NAME}" |
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| 47 | |
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| 48 | |
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| 49 | #### 0- lecture de config.card |
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| 50 | #### on veut les renseignements suivants : |
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| 51 | #### JobName, PATH_SIMUL, DateBegin et DateEnd |
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| 52 | eval $(grep JobName ${config_card}) |
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| 53 | eval $(grep PATH_SIMUL_FULL ${config_card}) |
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| 54 | eval $(grep DateBegin ${config_card}) |
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| 55 | eval $(grep DateEnd ${config_card}) |
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| 56 | eval $(grep IGCM_DEM_SIMU ${config_card}) |
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| 57 | |
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| 58 | |
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| 59 | #### Preparation de l'environnement |
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[1728] | 60 | # repertoire dans lequel seront renommes les fichiers de restart |
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| 61 | STORE_RESTART=$IGCM_DEM_SIMU/RESTART |
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[1709] | 62 | mkdir -p ${STORE_RESTART} |
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| 63 | |
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[1728] | 64 | # repertoire dans lequel nous stockerons les listes de restart a archiver |
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| 65 | RESTART_TAR=$IGCM_DEM_SIMU/restart_tar |
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| 66 | mkdir -p ${RESTART_TAR} |
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| 67 | |
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[1709] | 68 | # lecture de periodpack dans ${IGCM_DEM_SIMU}/period_pack.txt |
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| 69 | period_pack=`awk '{print $0} ' ${IGCM_DEM_SIMU}/period_pack.txt` |
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| 70 | |
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[1754] | 71 | DEM_log -1 "Period pack = ${period_pack}" |
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[1709] | 72 | #### 1- renommer les fichiers ###### |
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| 73 | DEM_log -1 "Renommer les fichiers de Restart" |
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| 74 | |
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| 75 | cd ${STORE_RESTART} |
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[1911] | 76 | if [ "x${STORE_RESTART}" != "x" ] |
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| 77 | then |
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[2045] | 78 | rm -rf * |
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[1911] | 79 | fi |
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[1709] | 80 | # On les copie sur le scratchdir en changeant le nom et conservant la date |
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[1754] | 81 | awk '{print $2}' ${IGCM_DEM_SIMU}/liste_restart_files_config.txt > ${IGCM_TMP}/${$}.liste_restart_files.txt |
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| 82 | #grep ${PATH_SIMUL_FULL} ${LISTE_DMNFS} | grep Restart | awk '{print $3}' | sed '/^.*Restart$/d' >> ${IGCM_TMP}/${$}.liste_restart_files.txt |
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[1709] | 83 | |
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| 84 | |
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[1730] | 85 | gawk -F/ '{dest_name=$(NF-2)("_") $(NF); system("ln -s " $0 " "dest_name)}' ${IGCM_TMP}/${$}.liste_restart_files.txt |
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[1709] | 86 | |
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[1730] | 87 | ls -l ${STORE_RESTART} > ${IGCM_TMP}/${$}.new_liste_restart_files.txt |
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[1709] | 88 | |
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[2045] | 89 | ### creation de liste en fonction du type de restart |
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| 90 | if [ "x${ON_IDRIS}" == "xno" ] |
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| 91 | then |
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| 92 | awk '{if (NR >1) print $9}' ${IGCM_TMP}/${$}.new_liste_restart_files.txt > ${IGCM_TMP}/${$}.new_liste_restart_files.txt_tmp |
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| 93 | else |
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| 94 | awk '{if (NR >1) print $8}' ${IGCM_TMP}/${$}.new_liste_restart_files.txt > ${IGCM_TMP}/${$}.new_liste_restart_files.txt_tmp |
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| 95 | fi |
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| 96 | sort ${IGCM_TMP}/${$}.new_liste_restart_files.txt_tmp > ${IGCM_TMP}/${$}.order_new_liste_restart_files.txt |
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| 97 | ref=`awk -F_ '{if (NR==1) print $1}' ${IGCM_TMP}/${$}.order_new_liste_restart_files.txt` |
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| 98 | |
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| 99 | i=1 |
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| 100 | for new_file in `awk '{print $0}' ${IGCM_TMP}/${$}.order_new_liste_restart_files.txt`; do |
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| 101 | new_ref=$( echo ${new_file} | sed -e "s/_.*//") |
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| 102 | |
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| 103 | if [ ${new_ref} == ${ref} ]; then |
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| 104 | echo ${new_file} >> ${IGCM_TMP}/${$}.restart_list_${i}.txt |
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| 105 | else |
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| 106 | ref=${new_ref} |
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| 107 | (( i = $i + 1 )) |
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| 108 | echo ${new_file} >> ${IGCM_TMP}/${$}.restart_list_${i}.txt |
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| 109 | fi |
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| 110 | done |
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| 111 | |
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| 112 | |
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| 113 | |
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| 114 | j=1 |
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| 115 | while [[ $j -le $i ]]; do |
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| 116 | |
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[1709] | 117 | ### 2- creer les listes de fichiers par periode #### |
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[2045] | 118 | DEM_log -1 "Creation des listes de fichiers par periode" |
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[1709] | 119 | ### 2.1- extraire l'annee et le mois de DateBegin ### |
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[2045] | 120 | date_begin=${DateBegin} |
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| 121 | date_end=${DateEnd} |
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[1709] | 122 | |
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[2045] | 123 | year_begin=$(echo ${date_begin} | cut -c 1-4 ) |
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| 124 | month_begin=$(echo ${date_begin} | cut -c 5-6 ) |
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| 125 | year_end=$(echo ${date_end} | cut -c 1-4 ) |
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| 126 | month_end=$(echo ${date_end} | cut -c 5-6 ) |
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[1709] | 127 | |
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| 128 | |
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| 129 | ### 2.2- creation des listes ### |
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[2045] | 130 | date_begin_pack=${date_begin} |
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| 131 | date_end_simulation=${date_end} |
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[1709] | 132 | |
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[2045] | 133 | month_begin_pack=${month_begin} |
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| 134 | year_begin_pack=${year_begin} |
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[1709] | 135 | |
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[2045] | 136 | number_pack=1 |
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| 137 | echo date_end_simulation : $date_end_simulation |
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| 138 | while [ ${date_begin_pack} -le ${date_end_simulation} ] |
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| 139 | do |
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| 140 | |
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| 141 | echo "On calcule la date de fin du pack " |
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[1709] | 142 | |
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[2045] | 143 | month_end_pack=${month_begin_pack} |
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| 144 | year_end_pack=`expr ${year_begin_pack} + ${period_pack}` |
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[1709] | 145 | |
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| 146 | |
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[2045] | 147 | date_end_pack=${year_end_pack}${month_end_pack}01 |
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| 148 | echo date_end_pack $date_end_pack |
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| 149 | |
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| 150 | for file in `awk '{print $1}' ${IGCM_TMP}/${$}.restart_list_${j}.txt`; do |
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| 151 | extract_date_file=`echo ${file} | sed -e "s/.*\${JobName}_//"` |
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| 152 | date_file=`echo ${extract_date_file}| sed 's/\([0-9]\{8\}\)_.*$/\1/g'` |
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| 153 | |
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| 154 | if [ ${date_file} -lt ${date_end_pack} ] |
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| 155 | then |
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| 156 | if [ ${date_file} -ge ${date_begin_pack} ] |
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| 157 | then |
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| 158 | echo ${file} >> ${IGCM_TMP}/${$}.liste_pack_restart_${number_pack}.txt |
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| 159 | grep -v ${file} ${IGCM_TMP}/${$}.restart_list_${j}.txt > ${IGCM_TMP}/${$}.restart_list_${j}.txt.tmp |
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| 160 | mv ${IGCM_TMP}/${$}.restart_list_${j}.txt.tmp ${IGCM_TMP}/${$}.restart_list_${j}.txt |
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| 161 | fi |
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| 162 | |
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| 163 | fi |
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| 164 | if [ ${date_file} -gt ${date_end_pack} ] |
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| 165 | then |
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| 166 | break |
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| 167 | fi |
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| 168 | done |
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[1709] | 169 | |
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| 170 | |
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| 171 | |
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[2045] | 172 | DEM_log -1 "On definit le datebegin de la prochaine periode pack" |
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| 173 | #on definit la periode pack suivante |
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| 174 | month_begin_pack=${month_end_pack} |
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| 175 | year_begin_pack=${year_end_pack} |
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| 176 | |
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| 177 | date_begin_pack=${year_begin_pack}${month_begin_pack}01 |
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| 178 | |
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| 179 | number_pack=`expr ${number_pack} + 1` |
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[1875] | 180 | |
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[2045] | 181 | done |
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| 182 | |
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| 183 | ((j = $j + 1 )) |
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| 184 | done |
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| 185 | |
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| 186 | compt_pack=1 |
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| 187 | while [[ $compt_pack -le $number_pack ]]; do |
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[1709] | 188 | #on archive les restart - le nom de l'archive contiendra ${yearbegin}${monthbegin}_${yearend}${monthend} |
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| 189 | # end etant la date du dernier fichier contenu et non pas la premiere date suivant |
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[2045] | 190 | DEM_log -1 "Recherche de la date de fin reel pour nommer l'archive " |
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[1709] | 191 | #On classe par ordre alphabetique les fichiers contenus dans liste_pack_restart |
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| 192 | #la date du dernier fichier donnera la date de fin du pack |
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[2045] | 193 | if [[ -f ${IGCM_TMP}/${$}.liste_pack_restart_${compt_pack}.txt ]] ; then |
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| 194 | sort ${IGCM_TMP}/${$}.liste_pack_restart_${compt_pack}.txt > ${IGCM_TMP}/${$}.liste_pack_restart_${compt_pack}.txt.tmp |
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[1922] | 195 | |
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[2045] | 196 | first_file=$(head -n 1 ${IGCM_TMP}/${$}.liste_pack_restart_${compt_pack}.txt.tmp ) |
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| 197 | extract_date_file=$( echo ${first_file} | sed -e "s/.*${JobName}_//" ) |
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| 198 | DateBegin_Restart=$(echo ${extract_date_file}| sed 's%\([0-9]\{8\}\)_.*$%\1%g' ) |
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| 199 | |
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| 200 | last_file=$(tail -n 1 ${IGCM_TMP}/${$}.liste_pack_restart_${compt_pack}.txt.tmp ) |
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| 201 | extract_date_file=$( echo ${last_file} | sed -e "s/.*${JobName}_//" ) |
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| 202 | DateEnd_Restart=$( echo ${extract_date_file}| sed 's/\([0-9]\{8\}\)_.*$/\1/g' ) |
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[2139] | 203 | mv ${IGCM_TMP}/${$}.liste_pack_restart_${compt_pack}.txt.tmp ${RESTART_TAR}/${JobName}_${DateBegin_Restart}_${DateEnd_Restart}_restart.list |
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[2045] | 204 | fi |
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[1922] | 205 | |
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[2045] | 206 | compt_pack=`expr ${compt_pack} + 1` |
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| 207 | done |
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[1709] | 208 | |
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| 209 | |
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[1728] | 210 | cd ${EXE_DIR} |
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[1822] | 211 | |
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| 212 | # gpdebug : le script n'a pas rencontre d'erreur. On l'inscrit dans le fichier de suivi |
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| 213 | simuMonitoring_OK "$MonitoringInfo" "$config_card" |
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