#!/bin/bash # But : trouver la taille ideale de pack pour une simulation donnee # on part sur une base de 10 ans et on augmente par 0.5 ou on divise # par 2 suivant un critère de taille # on passe en revue tous les types de fichiers d'Output et on conserve # la taille de pack la plus petite (hors HF) # $1= PATH/config_card d'une simulation avec # TagName/JobName/ExperimentName/SpaceName/DateBegin/DateEnd/PATH_SIMUL # pour commencer on travaille avec le fichier information_dmnfs #/cscratch/cont003/p86mart/FROM_CCRT_INFORMATIONS_DMNFS/information_dmnfs_2011-09-21 config_card=${1} LISTE_DMNFS=${2} # ---- export JOB_DIR=${JOB_DIR:-${TMP_MIGR_DATA}} export IGCM_DEM=${IGCM_DEM:-${SCRATCHDIR}/IGCM_DEM} export IGCM_TMP=${IGCM_TMP:-${IGCM_DEM}/tmp} mkdir -p ${IGCM_DEM} mkdir -p ${IGCM_TMP} clean_tmp=${clean_tmp:-yes} EXE_DIR=$(dirname ${0}) SCRIPT_NAME=$(basename ${0} ) source ${EXE_DIR}/DEM_utilities.sh # gpdebug : verif si le present script a ete execute jusqu'au bout ######### MonitoringInfo="${SCRIPT_NAME}-->OK" simuMonitoring_check "$MonitoringInfo" "$config_card" # gpdebug : Execute la function errorReceive() si reception d'un signal TERM trap 'DEM_errorReceive' TERM ######## # gpdebug : on augmente la liste des proc à détruire en cas d'erreur bloquante du présent proc export listPID="$$ ${listPID}" ######### DEM_log -0 "Demmarrage de ${SCRIPT_NAME}" cd ${EXE_DIR} # ---- eval $(grep JobName ${config_card} ) eval $(grep PATH_SIMUL_FULL ${config_card} ) eval $(grep DateBegin ${config_card} ) eval $(grep DateEnd ${config_card} ) eval $(grep IGCM_DEM_SIMU ${config_card} ) DEM_state=$( DEM_read_state ${IGCM_DEM}/config_card.liste ${config_card} ) # gpdebug : si c'est une premiere exec (pas une reprise) if [[ "x${execEveryStep}" == "1" ]] && [[ "${DEM_state}" != "ListToBeDone" ]] ; then echo "gpdebug : DEM_state=${DEM_state}" DEM_errorSend "${SCRIPT_NAME}:${LINENO}:Etat incorrect dans ${IGCM_DEM}/config_card.liste" fi DEM_write_state ${IGCM_DEM}/config_card.liste ${config_card} FindSizePackRunning # Periodicite du pack (20 ans par defaut) period_pack=20Y periodpackinyear=$( echo ${period_pack} | sed -e 's/[yY]//' ) # Taille max et min que devra avoir un pack en octet (20Go - 70Go) size_pack_max=70000000000 size_pack_min=20000000000 SIMUL=${PATH_SIMUL_FULL}/ # Nettoyons les tests precedents .... rm -f ${IGCM_DEM_SIMU}/info_Output.txt rm -f ${IGCM_DEM_SIMU}/info_name_file.txt # 1- Trouver tous les repertoires d'Output DEM_log -1 "Recherche des repertoires Output" #grep ${SIMUL} ${LISTE_DMNFS} > ${IGCM_TMP}/${$}.info_tmp.txt #grep "/Output/" ${IGCM_TMP}/${$}.info_tmp.txt > ${IGCM_TMP}/${$}.info_tmp_2.txt #awk '{print $(NF-2) " " $(NF-1)}' ${IGCM_TMP}/${$}.info_tmp_2.txt > ${IGCM_DEM_SIMU}/info_Output.txt [[ "${clean_tmp}" = "yes" ]] && rm -f ${IGCM_TMP}/${$}.info_tmp.txt ${IGCM_TMP}/${$}.info_tmp_2.txt # 2- Trouver la liste des noms des fichiers d'Output DEM_log -1 "Recherche des noms de fichiers Output" sed -e "s%.*_\([0-9]\{8\}\)_\([0-9]\{8\}\)_%%" ${IGCM_DEM_SIMU}/liste_output_files_config.txt | awk '/.nc/{print $0}' > ${IGCM_TMP}/${$}.info_tmp.txt #on enleve si des fichiers ne repondent pas au critere et sont donc encore en / cat ${IGCM_TMP}/${$}.info_tmp.txt | grep -v "/" > ${IGCM_TMP}/${$}.info_tmp_bis.txt ## On enleve mesh_mask qui est un cas particulier a traiter ulterieurement #sed '/mesh_mask/d' ${IGCM_TMP}/${$}.info_tmp_bis.txt > ${IGCM_TMP}/${$}.info_tmp_2.txt # On retire les doublons de la liste précédent awk '{if (x[$0] != "") next ; print $0 ; x[$0]=$0}' < ${IGCM_TMP}/${$}.info_tmp_bis.txt >> ${IGCM_DEM_SIMU}/info_name_file.txt [[ "${clean_tmp}" = "yes" ]] && rm -f ${IGCM_TMP}/${$}.info_tmp.txt ${IGCM_TMP}/${$}.info_tmp_bis.txt #!!!# Reduction de la taille du probleme pour test # grep 1M_cpl_atm.nc ${IGCM_DEM_SIMU}/info_name_file.txt > ${IGCM_DEM_SIMU}/info_name_file.txt.tmp # grep 1M_grid_T.nc ${IGCM_DEM_SIMU}/info_name_file.txt >> ${IGCM_DEM_SIMU}/info_name_file.txt.tmp # mv ${IGCM_DEM_SIMU}/info_name_file.txt.tmp ${IGCM_DEM_SIMU}/info_name_file.txt # On cree la liste des fichiers pour chaque type_file DEM_log -1 "Creation de la liste des fichiers" for type_file in `awk '{print $0}' ${IGCM_DEM_SIMU}/info_name_file.txt` do #for type_file in 1D_cpl_atm.nc ; do DEM_log -1 "Traitement type de fichier = ${type_file}" grep ${type_file} ${IGCM_DEM_SIMU}/liste_output_files_config.txt > ${IGCM_TMP}/${$}.info_${type_file}.txt # cette liste comporte en premiere colonne la taille et en deuxieme le path du fichier # on classe la liste par ordre alphabetique des path des fichiers sort -k 2 ${IGCM_TMP}/${$}.info_${type_file}.txt > ${IGCM_TMP}/${$}.tmp_info_${type_file}.txt.tmp cp ${IGCM_TMP}/${$}.tmp_info_${type_file}.txt.tmp ${IGCM_TMP}/${$}.info_${type_file}.txt [[ "${clean_tmp}" = "yes" ]] && rm -f ${IGCM_TMP}/${$}.tmp_info_${type_file}.txt.tmp done # 3- Maintenant pour chaque type de fichier de sortie nous allons calculer la # taille qu'aurait le pack de {periodpackinyear}ans DEM_log -1 "Debut recherche taille de pack" # Recherche des dates du premier pack year_begin=$( echo ${DateBegin} | cut -c 1-4 ) month_begin=$( echo ${DateBegin} | cut -c 5-6 ) year_end=$( echo ${DateEnd} | cut -c 1-4 ) month_end=$( echo ${DateEnd} | cut -c 5-6 ) date_begin_pack=${DateBegin} date_end_simulation=${DateEnd} month_begin_pack=${month_begin} year_begin_pack=${year_begin} number_pack=1 # on ne fait le calcul que pour les dix premiers pack (donc 20 * 10 = 200 ans) # cela doit donner un echantillon suffisant date_begin_pack=`echo $date_begin_pack|sed 's/^0*//'` date_end_simulation=`echo $date_end_simulation|sed 's/^0*//'` while [[ ${date_begin_pack} -le ${date_end_simulation} && ${number_pack} -le 10 ]] do month_end_pack=${month_begin_pack} year_end_pack=$(( 10#${year_begin_pack} + ${periodpackinyear} )) date_end_pack=${year_end_pack}${month_end_pack}01 DEM_log -2 "Entree boucle : year_begin_pack month_begin_pack year_end_pack month_end_pack : ${year_begin_pack} ${month_begin_pack} ${year_end_pack} ${month_end_pack}" # on travaille pour chaque type de fichiers for type_file in `awk '{print $0}' ${IGCM_DEM_SIMU}/info_name_file.txt` do #for type_file in 1M_grid_T.nc ; do DEM_log -3 ${type_file} ${number_pack} taille=0 #il faut les passer en revue et calculer par tranche de period_pack leur somme for file in `awk '{print $2}' ${IGCM_TMP}/${$}.info_${type_file}.txt` ; do #extraire la date de debut et la date de fin de la periode d'output traitee par le fichier extract_date_file=$( echo ${file} | sed "s%.*${JobName}_%%" ) date_debut=$( echo ${extract_date_file}| sed 's%\([0-9]\{8\}\)_.*$%\1%g' ) date_fin=$( echo ${extract_date_file}| sed 's%.*_\([0-9]\{8\}\)_.*$%\1%g' ) if [ ${date_debut} -lt ${date_end_pack} ] then if [ ${date_fin} -ge ${date_begin_pack} ] then grep ${file} ${IGCM_TMP}/${$}.info_${type_file}.txt >> ${IGCM_TMP}/${$}.info_${type_file}_${number_pack}.txt # on efface le fichier de la liste pour ne pas travailler dessus pour le prochain pack grep -v ${file} ${IGCM_TMP}/${$}.info_${type_file}.txt > ${IGCM_TMP}/${$}.info_${type_file}.txt.tmp cp ${IGCM_TMP}/${$}.info_${type_file}.txt.tmp ${IGCM_TMP}/${$}.info_${type_file}.txt [[ "${clean_tmp}" = "yes" ]] && rm -f ${IGCM_TMP}/${$}.info_${type_file}.txt.tmp fi else # comme la liste est classee par ordre alphabetique --> par ordre croissant des periodes de sorties # des que un fichier n'est plus dans le pack on peut sortir c'est qu'on les a tous. break fi done # on fait la somme par periodpack et par type de fichier de la taille qu'aurait le pack if [ -f ${IGCM_TMP}/${$}.info_${type_file}_${number_pack}.txt ] then awk 'BEGIN {y = 0} {x = $1 ; y = y + x } END{print y}' ${IGCM_TMP}/${$}.info_${type_file}_${number_pack}.txt >> ${IGCM_TMP}/${$}.size_pack_${type_file}.txt [[ "${clean_tmp}" = "yes" ]] && rm -f ${IGCM_TMP}/${$}.info_${type_file}_${number_pack}.txt fi done DEM_log -2 "Sortie boucle : year_begin_pack month_begin_pack year_end_pack month_end_pack : ${year_begin_pack} ${month_begin_pack} ${year_end_pack} ${month_end_pack}" month_begin_pack=${month_end_pack} year_begin_pack=${year_end_pack} date_begin_pack=${year_begin_pack}${month_begin_pack}01 number_pack=$(( ${number_pack} + 1 )) done # Pour chaque type de fichier on verifie si toutes les tailles sont dans # la fourchette size_pack_min / size_pack_max # Si une taille est plus petite # attention il ne faut pas tenir compte du dernier pack qui peut etre # inferieur a periodpack new_period=999999 newpackinyear=0 if [[ -f ${IGCM_TMP}/${$}.size_pack_${type_file}.txt ]]; then for type_file in `awk '{print $0}' ${IGCM_DEM_SIMU}/info_name_file.txt` do nb_line=$(cat ${IGCM_TMP}/${$}.size_pack_${type_file}.txt | wc -l ) if [ ${nb_line} -gt 1 ] then for taille in `head -n -1 ${IGCM_TMP}/${$}.size_pack_${type_file}.txt` do [[ ${taille} -lt ${size_pack_min} ]] && period_tmp=$(( ${size_pack_min} * ${periodpackinyear} / ${taille} )) [[ ${taille} -gt ${size_pack_max} ]] && period_tmp=$(( ${size_pack_max} * ${periodpackinyear} / ${taille} )) [[ ${taille} -ge ${size_pack_min} && ${taille} -le ${size_pack_max} ]] && period_tmp=${periodpackinyear} [[ ${period_tmp} -lt ${new_period} ]] && new_period=${period_tmp} done else # Dans ce cas la il n'y avait pas assez de fichiers pour remplir une periode complete # # il faut donc commencer par calculer la taille du pack que l'on a fait # newpackinyear=$(( ${year_end} - ${year_begin} )) newpackinyear=$(( $newpackinyear + 1 )) [[ ${newpackinyear} -lt 1 ]] && newpackinyear=1 for taille in `head ${IGCM_TMP}/${$}.size_pack_${type_file}.txt` do [[ ${taille} -lt ${size_pack_min} ]] && period_tmp=${newpackinyear} [[ ${taille} -gt ${size_pack_max} ]] && period_tmp=$(( ${size_pack_max} * ${newpackinyear} / ${taille} )) [[ ${taille} -ge ${size_pack_min} && ${taille} -le ${size_pack_max} ]] && period_tmp=${newpackinyear} [[ ${period_tmp} -lt ${new_period} ]] && new_period=${period_tmp} done fi done fi DEM_log -1 "taille=${taille}" DEM_log -1 "new_period=${new_period}" # on veut que la taille de pack soit de 1 2 5 10 20 50 ou 100 ans # sauf si newperiod = nb annee de simul auquel cas on ne tronque pas declare -a liste_period=( 1 2 5 10 20 50 100 ) change=0 for i in 1 2 3 4 5 6 ; do if [[ ${new_period} -lt ${liste_period[i]} && ${change} -eq 0 && ${newpackinyear} -ne 0 ]] then new_period=${liste_period[i-1]} change=1 fi done [[ ${new_period} -gt 100 ]] && new_period=100 [[ ${new_period} -eq 0 ]] && new_period=1 [[ "${clean_tmp}" = "yes" ]] && rm -f ${IGCM_TMP}/${$}.* echo ${new_period} > ${IGCM_DEM_SIMU}/period_pack.txt DEM_log -0 "La nouvelle periode de pack est : ${new_period}Y" DEM_write_state ${IGCM_DEM}/config_card.liste ${config_card} FindSizePackDone # gpdebug : le script n'a pas rencontre d'erreur. On l'inscrit dans le fichier de suivi simuMonitoring_OK "$MonitoringInfo" "$config_card" DEM_log -0 "Fin de ${SCRIPT_NAME}" exit