source: TOOLS/WATER_BUDGET/ATM_waterbudget.py @ 6652

Last change on this file since 6652 was 6651, checked in by omamce, 7 months ago

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1#!/usr/bin/env python3
2###
3### Script to check water conservation in the IPSL coupled model
4###
5##  Warning, to install, configure, run, use any of included software or
6##  to read the associated documentation you'll need at least one (1)
7##  brain in a reasonably working order. Lack of this implement will
8##  void any warranties (either express or implied).  Authors assumes
9##  no responsability for errors, omissions, data loss, or any other
10##  consequences caused directly or indirectly by the usage of his
11##  software by incorrectly or partially configured personal
12##
13##
14# SVN Information
15SVN = {
16    'Author'  : "$Author$",
17    'Date'    : "$Date$",
18    'Revision': "$Revision$",
19    'Id'      : "$Id: ATM_waterbudget.py 6508 2023-06-13 10:58:38Z omamce $",
20    'HeadURL' : "$HeadUrl: svn+ssh://omamce@forge.ipsl.jussieu.fr/ipsl/forge/projets/igcmg/svn/TOOLS/WATER_BUDGET/ATM_waterbudget.py $"
21    }
22
23###
24## Import system modules
25import sys, os, shutil#, subprocess, platform
26import configparser, re
27
28## Import needed scientific modules
29import numpy as np, xarray as xr
30
31# Check python version
32if sys.version_info < (3, 8, 0) :
33    print ( f'Python version : {platform.python_version()}' ) 
34    raise Exception ( "Minimum Python version is 3.8" )
35
36## Import local modules
37import WaterUtils as wu
38import libIGCM_sys
39import nemo, lmdz
40
41from WaterUtils import VarInt, Rho, Ra, Grav, ICE_rho_ice, ICE_rho_sno, OCE_rho_liq, ATM_rho, SRF_rho, RUN_rho, ICE_rho_pnd, YearLength
42
43## Creates parser for reading .ini input file
44## -------------------------------------------
45config = configparser.ConfigParser ( interpolation=configparser.ExtendedInterpolation() )
46config.optionxform = str # To keep capitals
47
48## Experiment parameters
49## ---------------------
50ATM=None ; ATM_HIS='latlon' ; SRF_HIS='latlon' ; RUN_HIS='latlon' ; ORCA=None ; NEMO=None ; OCE_relax=False
51OCE_icb=False ; Coupled=False ; Routing=None ; TestInterp=None
52TarRestartPeriod_beg=None ; TarRestartPeriod_end=None ; Comment=None ; Period=None ; Title=None
53YearBegin=None ; YearEnd=None ; DateBegin=None ; DateEnd=None
54
55##
56ARCHIVE=None ; STORAGE=None ; SCRATCHDIR=None ; R_IN=None ; rebuild=None ; TmpDir=None
57FileDir=None ; FileOut=None
58dir_ATM_his=None ; dir_SRF_his=None ; dir_OCE_his=None ; dir_ICE_his=None
59FileCommon=None ; file_ATM_his=None ; file_SRF_his=None ; file_RUN_his=None
60file_OCE_his=None ;  file_ICE_his=None ; file_OCE_sca=None
61tar_restart_beg=None ; tar_restart_end=None ; file_ATM_beg=None ; file_ATM_end=None ; file_DYN_beg=None
62file_DYN_end=None ; file_SRF_beg=None ; file_SRF_end=None
63file_RUN_beg=None ; file_RUN_end=None ; file_RUN_end=None ; file_OCE_beg=None
64file_ICE_beg=None ; file_OCE_beg=None
65file_OCE_end=None ; file_ICE_beg=None ; file_OCE_end=None ; file_ICE_end=None
66tar_restart_beg_ATM=None ; tar_restart_beg_DYN=None ; tar_restart_beg_SRF=None
67tar_restart_beg_RUN=None ; tar_restart_beg_OCE=None ; tar_restart_beg_ICE=None
68tar_restart_end_ATM=None ; tar_restart_end_DYN=None ; tar_restart_end_SRF=None
69tar_restart_end_RUN=None ; tar_restart_end_OCE=None ; tar_restart_end_ICE=None
70ContinueOnError=False ; ErrorCount=0 # ; SortIco = False
71
72##
73## Precision of history file reading
74## ---------------------------------
75# Default is float (full precision). Degrade the precision by using np.float32
76# Restart file are always read at the full precision
77readPrec=float
78
79## Read command line arguments
80## ---------------------------
81print ( "Name of Python script:", sys.argv[0] )
82IniFile = sys.argv[1]
83
84# Test existence of IniFile
85if not os.path.exists (IniFile ) :
86    raise FileExistsError ( f"File not found : {IniFile = }" )
87
88if 'full' in IniFile : FullIniFile = IniFile
89else                 : FullIniFile = 'full_' + IniFile
90   
91print ("Input file : ", IniFile )
92config.read (IniFile)
93FullIniFile = 'full_' + IniFile
94
95## Reading config.card if possible
96## -------------------------------
97ConfigCard = None
98
99if 'Experiment' in config.keys ()  : ## Read Experiment on Config file if possible
100    if 'ConfigCard' in config['Experiment'].keys () :
101        ConfigCard = config['Experiment']['ConfigCard']
102        print ( f'{ConfigCard=}' )
103
104if ConfigCard : ## Read config card if it exists
105    # Text existence of ConfigCard
106    if os.path.exists ( ConfigCard ) :
107        print ( f'Reading Config Card : {ConfigCard}' )
108        ## Creates parser for reading .ini input file
109        MyReader = configparser.ConfigParser (interpolation=configparser.ExtendedInterpolation() )
110        MyReader.optionxform = str # To keep capitals
111       
112        MyReader.read (ConfigCard)
113
114        for VarName in ['JobName', 'ExperimentName', 'SpaceName', 'LongName', 'ModelName', 'TagName'] :
115            if VarName in MyReader['UserChoices'].keys() :
116                locals()[VarName] = MyReader['UserChoices'][VarName]
117                exec  ( f'{VarName} = wu.setBool ({VarName})' )
118                exec  ( f'{VarName} = wu.setNum  ({VarName})' )
119                exec  ( f'{VarName} = wu.setNone ({VarName})' )
120                exec  ( f'wu.{VarName} = {VarName}' )
121                print ( f'    {VarName:21} set to : {locals()[VarName]:}' )
122               
123        for VarName in ['PackFrequency'] :
124            if VarName in MyReader['Post'].keys() :
125                locals()[VarName] = MyReader['Post'][VarName]
126                exec  ( f'{VarName} = wu.setBool ({VarName})' )
127                exec  ( f'{VarName} = wu.setNum  ({VarName})' )
128                exec  ( f'{VarName} = wu.setNone ({VarName})' )
129                exec  ( f'wu.{VarName} = {VarName}' )
130                print ( f'    {VarName:21} set to : {locals()[VarName]:}' )
131    else :
132        raise FileExistsError ( f"File not found : {ConfigCard = }" )
133               
134## Reading config file
135## -------------------
136for Section in ['Config', 'Experiment', 'libIGCM', 'Files', 'Physics' ] :
137   if Section in config.keys () : 
138        print ( f'\nReading [{Section}]' )
139        for VarName in config[Section].keys() :
140            locals()[VarName] = config[Section][VarName]
141            exec  ( f'{VarName} = wu.setBool ({VarName})' )
142            exec  ( f'{VarName} = wu.setNum  ({VarName})' )
143            exec  ( f'{VarName} = wu.setNone ({VarName})' )
144            exec  ( f'wu.{VarName} = {VarName}' )
145            print ( f'    {VarName:21} set to : {locals()[VarName]}' )
146            #exec ( f'del {VarName}' )
147
148print ( f'\nConfig file readed : {IniFile} ' )
149
150##
151## Reading prec
152if wu.unDefined ( 'readPrec' )  :
153    readPrec = np.float64
154else :
155    if readPrec in ["float", "float64", "r8", "double", "<class 'float'>"         ] : readPrec = float
156    if readPrec in [         "float32", "r4", "single", "<class 'numpy.float32'>" ] : readPrec = np.float32
157    if readPrec in [         "float16", "r2", "half"  , "<class 'numpy.float16'>" ] : readPrec = np.float16
158   
159## Some physical constants
160## =======================
161if wu.unDefined ( 'Ra' )           : Ra          = wu.Ra           #-- Earth Radius (m)
162if wu.unDefined ( 'Grav' )         : Grav        = wu.Grav         #-- Gravity (m^2/s
163if wu.unDefined ( 'ICE_rho_ice' )  : ICE_rho_ice = wu.ICE_rho_ice  #-- Ice volumic mass (kg/m3) in LIM3
164if wu.unDefined ( 'ICE_rho_sno')   : ICE_rho_sno = wu.ICE_rho_sno  #-- Snow volumic mass (kg/m3) in LIM3
165if wu.unDefined ( 'OCE_rho_liq' )  : OCE_rho_liq = wu.OCE_rho_liq  #-- Ocean water volumic mass (kg/m3) in NEMO
166if wu.unDefined ( 'ATM_rho' )      : ATM_rho     = wu.ATM_rho      #-- Water volumic mass in atmosphere (kg/m^3)
167if wu.unDefined ( 'SRF_rho' )      : SRF_rho     = wu.SRF_rho      #-- Water volumic mass in surface reservoir (kg/m^3)
168if wu.unDefined ( 'RUN_rho' )      : RUN_rho     = wu.RUN_rho      #-- Water volumic mass of rivers (kg/m^3)
169if wu.unDefined ( 'ICE_rho_pnd' )  : ICE_rho_pnd = wu.ICE_rho_pnd  #-- Water volumic mass in ice ponds (kg/m^3)
170if wu.unDefined ( 'YearLength' )   : YearLength  = wu.YearLength   #-- Year length (s)
171   
172## Set libIGCM and machine dependant values
173## ----------------------------------------
174if not 'Files' in config.keys () : config['Files'] = {}
175
176config['Physics'] = { 'Ra':str(Ra), 'Grav':str(Grav), 'ICE_rho_ice':str(ICE_rho_ice), 'ICE_rho_sno':str(ICE_rho_sno),
177                      'OCE_rho_liq':str(OCE_rho_liq), 'ATM_rho':str(ATM_rho), 'SRF_rho':str(SRF_rho), 'RUN_rho':str(RUN_rho)}
178
179config['Config'] = { 'ContinueOnError':str(ContinueOnError), 'TestInterp':str(TestInterp), 'readPrec':str(readPrec) }
180
181## --------------------------
182ICO  = ( 'ICO' in wu.ATM )
183LMDZ = ( 'LMD' in wu.ATM )
184
185mm = libIGCM_sys.config ( TagName=TagName, SpaceName=SpaceName, ExperimentName=ExperimentName, JobName=JobName, User=User, Group=Group,
186             ARCHIVE=None, SCRATCHDIR=None, STORAGE=None, R_IN=None, R_OUT=None, R_FIG=None, rebuild=None, TmpDir=None, 
187             R_SAVE=None, R_FIGR=None, R_BUFR=None, R_BUF_KSH=None, REBUILD_DIR=None, POST_DIR=None )
188globals().update(mm)
189
190config['Files']['TmpDir'] = TmpDir
191config['libIGCM'] = { 'ARCHIVE':ARCHIVE, 'STORAGE':STORAGE, 'TmpDir':TmpDir, 'R_IN':R_IN, 'rebuild':rebuild }
192
193## Defines begining and end of experiment
194## --------------------------------------
195if wu.unDefined ( 'DateBegin' ) :
196    DateBegin = f'{YearBegin}0101'
197    config['Experiment']['DateBegin'] = str(DateBegin)
198else :
199    YearBegin, MonthBegin, DayBegin = wu.SplitDate ( DateBegin )
200    DateBegin = wu.FormatToGregorian (DateBegin)
201    config['Experiment']['YearBegin'] = str(YearBegin)
202
203if wu.unDefined ( 'DateEnd' )   :
204    DateEnd   = f'{YearEnd}1231'
205    config['Experiment']['DateEnd'] = str(DateEnd)
206else :
207    YearEnd, MonthEnd, DayEnd = wu.SplitDate ( DateEnd )
208    DateEnd   = wu.FormatToGregorian (DateEnd)
209    config['Experiment']['DateEnd'] = str(DateEnd)
210
211if wu.unDefined ( 'PackFrequency' ) :
212    PackFrequency = YearEnd - YearBegin + 1
213    config['Experiment']['PackFrequency']   = f'{PackFrequency}'
214
215if type ( PackFrequency ) == str : 
216    if 'Y' in PackFrequency : PackFrequency = PackFrequency.replace ( 'Y', '') 
217    if 'M' in PackFrequency : PackFrequency = PackFrequency.replace ( 'M', '')
218    PackFrequency = int ( PackFrequency )
219   
220## Output file with water budget diagnostics
221## -----------------------------------------
222if wu.unDefined ( 'FileOut' ) :
223    FileOut = f'ATM_waterbudget_{JobName}_{YearBegin}_{YearEnd}'
224    if ICO : 
225        if ATM_HIS == 'latlon' : FileOut = f'{FileOut}_LATLON'
226        if ATM_HIS == 'ico'    : FileOut = f'{FileOut}_ICO'
227    if readPrec == np.float32  : FileOut = f'{FileOut}_float32'
228    FileOut = f'{FileOut}.out'
229
230config['Files']['FileOut'] = FileOut
231
232f_out = open ( FileOut, mode = 'w' )
233
234## Useful functions
235## ----------------
236if readPrec == float :
237    def rprec (tab) : return tab
238else                 :
239    def rprec (tab) : return tab.astype(readPrec).astype(float)
240   
241def kg2Sv    (val, rho=ATM_rho) :
242    '''From kg to Sverdrup'''
243    return val/dtime_sec*1.0e-6/rho
244
245def kg2myear (val, rho=ATM_rho) :
246    '''From kg to m/year'''
247    return val/ATM_aire_sea_tot/rho/NbYear
248
249def var2prt (var, small=False, rho=ATM_rho) :
250    if small :  return var , kg2Sv(var, rho=rho)*1000., kg2myear(var, rho=rho)*1000
251    else     :  return var , kg2Sv(var, rho=rho)      , kg2myear(var, rho=rho)
252
253def prtFlux (Desc, var, Form='F', small=False, rho=ATM_rho, width=15) :
254    if small :
255        if Form in ['f', 'F'] : ff=" {:14.6e} kg | {:12.4f} mSv | {:12.4f} mm/year "
256        if Form in ['e', 'E'] : ff=" {:14.6e} kg | {:12.4e} mSv | {:12.4e} mm/year "
257    else :
258        if Form in ['f', 'F'] : ff=" {:14.6e} kg | {:12.4f} Sv  | {:12.4f} m/year  "
259        if Form in ['e', 'E'] : ff=" {:14.6e} kg | {:12.4e} Sv  | {:12.4e} m/year  "
260    echo ( (' {:>{width}} = ' +ff).format (Desc, *var2prt(var, small=small, rho=rho), width=width ) )
261    return None
262
263def echo (string, end='\n') :
264    '''Function to print to stdout *and* output file'''
265    print ( str(string), end=end  )
266    sys.stdout.flush ()
267    f_out.write ( str(string) + end )
268    f_out.flush ()
269    return None
270
271echo ( f'{ContinueOnError = }' )
272echo ( f'{readPrec        = }' )
273
274echo ( f'{JobName         = }' )
275echo ( f'{ConfigCard      = }' )
276echo ( f'{libIGCM         = }' )     
277echo ( f'{User            = }' )       
278echo ( f'{Group           = }' )       
279echo ( f'{Freq            = }' )       
280echo ( f'{YearBegin       = }' )     
281echo ( f'{YearEnd         = }' )     
282echo ( f'{DateBegin       = }' )
283echo ( f'{DateEnd         = }' )
284echo ( f'{PackFrequency   = }' ) 
285echo ( f'{ATM             = }' )       
286echo ( f'{Routing         = }' )       
287echo ( f'{ORCA            = }' )     
288echo ( f'{NEMO            = }' )     
289echo ( f'{Coupled         = }' )     
290echo ( f'{ATM_HIS         = }' )     
291echo ( f'{SRF_HIS         = }' )     
292echo ( f'{RUN_HIS         = }' )     
293
294## Set libIGCM directories
295## -----------------------
296if wu.unDefined ('R_OUT'      ) : R_OUT       = os.path.join ( ARCHIVE   , 'IGCM_OUT' )
297if wu.unDefined ('R_BUF'      ) : R_BUF       = os.path.join ( SCRATCHDIR, 'IGCM_OUT' )
298if wu.unDefined ('L_EXP'      ) : L_EXP       = os.path.join (TagName, SpaceName, ExperimentName, JobName)
299if wu.unDefined ('R_SAVE'     ) : R_SAVE      = os.path.join ( R_OUT, L_EXP )
300if wu.unDefined ('R_BUFR'     ) : R_BUFR      = os.path.join ( R_BUF, L_EXP )
301if wu.unDefined ('POST_DIR'   ) : POST_DIR    = os.path.join ( R_BUFR, 'Out' )
302if wu.unDefined ('REBUILD_DIR') : REBUILD_DIR = os.path.join ( R_BUFR, 'REBUILD' )
303if wu.unDefined ('R_BUF_KSH'  ) : R_BUF_KSH   = os.path.join ( R_BUFR, 'Out' )
304if wu.unDefined ('R_FIGR'     ) : R_FIGR      = os.path.join ( STORAGE, 'IGCM_OUT', L_EXP )
305
306config['libIGCM'].update ( { 'R_OUT':R_OUT, 'R_BUF':R_BUF, 'L_EXP':L_EXP, 'R_BUFR':R_BUFR, 'POST_DIR':POST_DIR,
307                      'REBUILD_DIR':REBUILD_DIR, 'R_BUF_KSH':R_BUF_KSH, 'R_FIGR':R_FIGR, 'rebuild':rebuild } )
308
309## Set directory to extract files
310## ------------------------------
311if wu.unDefined ( 'FileDir' ) : FileDir = os.path.join ( TmpDir, f'WATER_{JobName}' )
312config['Files']['FileDir'] = FileDir
313
314if not os.path.isdir ( FileDir ) : os.makedirs ( FileDir )
315
316##- Set directories to rebuild ocean and ice restart files
317if wu.unDefined ( 'FileDirOCE' ) : FileDirOCE = os.path.join ( FileDir, 'OCE' )
318if wu.unDefined ( 'FileDirICE' ) : FileDirICE = os.path.join ( FileDir, 'ICE' )
319if not os.path.exists ( FileDirOCE ) : os.mkdir ( FileDirOCE )
320if not os.path.exists ( FileDirICE ) : os.mkdir ( FileDirICE )
321
322echo (' ')
323echo ( f'JobName     : {JobName}'    )
324echo ( f'Comment     : {Comment}'    )
325echo ( f'TmpDir      : {TmpDir}'     )
326echo ( f'FileDir     : {FileDir}'    )
327echo ( f'FileDirOCE  : {FileDirOCE}' )
328echo ( f'FileDirICE  : {FileDirICE}' )
329
330echo ( f'\nDealing with {L_EXP}'  )
331
332## Creates model output directory names
333## ------------------------------------
334if Freq == "MO" : FreqDir = os.path.join ('Output' , 'MO' )
335if Freq == "SE" : FreqDir = os.path.join ('Analyse', 'SE' )
336if wu.unDefined ('dir_ATM_his' ) :
337    dir_ATM_his = os.path.join ( R_SAVE, "ATM", FreqDir )
338    config['Files']['dir_ATM_his'] = dir_ATM_his
339if wu.unDefined ( 'dir_SRF_his' ) : 
340    dir_SRF_his = os.path.join ( R_SAVE, "SRF", FreqDir )
341    config['Files']['dir_SRF_his'] = dir_SRF_his
342   
343echo ( f'The analysis relies on files from the following model output directories : ' )
344echo ( f'{dir_ATM_his = }' )
345echo ( f'{dir_SRF_his = }' )
346
347##-- Creates files names
348if wu.unDefined ( 'Period' ) :
349    if Freq == 'MO' : Period = f'{DateBegin}_{DateEnd}_1M'
350    if Freq == 'SE' : Period = f'SE_{DateBegin}_{DateEnd}_1M'
351    config['Files']['Period'] = Period
352
353config['Files']['DateBegin'] = DateBegin
354config['Files']['DateBegin'] = DateEnd
355       
356echo ( f'Period   : {Period}' )
357   
358if wu.unDefined ( 'FileCommon' ) :
359    FileCommon = f'{JobName}_{Period}'
360    config['Files']['FileCommon'] = FileCommon
361
362if wu.unDefined ( 'Title' ) :
363    Title = f'{JobName} : {Freq} : {DateBegin} - {DateEnd}'
364    config['Files']['Title'] = Title
365     
366echo ('\nOpen history files' )
367if wu.unDefined ( 'file_ATM_his' ) :
368    if ATM_HIS == 'latlon' :
369        file_ATM_his = os.path.join ( dir_ATM_his, f'{FileCommon}_histmth.nc' )
370    if ATM_HIS == 'ico' :
371        file_ATM_his = os.path.join ( dir_ATM_his, f'{FileCommon}_histmth_ico.nc' )
372    config['Files']['file_ATM_his'] = file_ATM_his
373if wu.unDefined ( 'file_SRF_his' ) :
374    if ATM_HIS == 'latlon' :
375        file_SRF_his = os.path.join ( dir_SRF_his, f'{FileCommon}_sechiba_history.nc' )
376    if ATM_HIS == 'ico' :
377        file_SRF_his = os.path.join ( dir_SRF_his, f'{FileCommon}_sechiba_history_ico.nc' )
378    config['Files']['file_SRF_his'] = file_SRF_his
379
380if Routing == 'SIMPLE' :
381    if file_RUN_his == None :
382        if ATM_HIS == 'latlon' :
383            file_RUN_his = os.path.join ( dir_SRF_his, f'{FileCommon}_sechiba_history.nc' )
384        if ATM_HIS == 'ico' :
385            file_RUN_his = os.path.join ( dir_SRF_his, f'{FileCommon}_sechiba_history_ico.nc' )
386        config['Files']['file_RUN_his'] = file_RUN_his
387
388d_ATM_his = xr.open_dataset ( file_ATM_his, use_cftime=True, decode_times=True, decode_cf=True ).squeeze()
389d_SRF_his = xr.open_dataset ( file_SRF_his, use_cftime=True, decode_times=True, decode_cf=True ).squeeze()
390if Routing == 'SECHIBA' : d_RUN_his = d_SRF_his
391if Routing == 'SIMPLE'  : d_RUN_his = xr.open_dataset ( file_RUN_his, use_cftime=True, decode_times=True, decode_cf=True ).squeeze()
392
393echo ( f'{file_ATM_his = }' )
394echo ( f'{file_SRF_his = }' )
395if Routing == 'SIMPLE' : echo ( f'{file_RUN_his = }' )
396
397## Compute run length
398## ------------------
399dtime = ( d_ATM_his.time_counter_bounds.max() - d_ATM_his.time_counter_bounds.min() )
400echo ('\nRun length : {:8.2f} days'.format ( (dtime/np.timedelta64(1, "D")).values ) )
401dtime_sec = (dtime/np.timedelta64(1, "s")).values.item() # Convert in seconds
402
403##-- Compute length of each period
404dtime_per = (d_ATM_his.time_counter_bounds[:,-1] -  d_ATM_his.time_counter_bounds[:,0] )
405echo ('\nPeriods lengths (days) : {:} days'.format ( (dtime_per/np.timedelta64(1, "D")).values ) )
406dtime_per_sec = (dtime_per/np.timedelta64(1, "s")).values # In seconds
407dtime_per_sec = xr.DataArray (dtime_per_sec, dims=["time_counter", ], coords=[d_ATM_his.time_counter,] )
408dtime_per_sec.attrs['unit'] = 's'
409
410##-- Number of years (approximative)
411NbYear = dtime_sec / YearLength
412
413##-- Extract restart files from tar
414
415if wu.unDefined ('TarRestartDate_beg' ) : TarRestartDate_beg = wu.DateMinusOneDay ( DateBegin )
416if wu.unDefined ('TarRestartDate_end' ) : TarRestartDate_end = wu.FormatToGregorian ( DateEnd )
417
418if wu.unDefined ( 'TarRestartPeriod_beg' ) :
419
420    TarRestartPeriod_beg_DateEnd = TarRestartDate_beg
421    TarRestartPeriod_beg_DateBeg = wu.DateAddYear ( TarRestartPeriod_beg_DateEnd, -PackFrequency )
422    TarRestartPeriod_beg_DateBeg = wu.DatePlusOneDay ( TarRestartPeriod_beg_DateBeg )
423   
424    TarRestartPeriod_beg = f'{TarRestartPeriod_beg_DateBeg}_{TarRestartPeriod_beg_DateEnd}'
425    echo (f'Tar period for initial restart : {TarRestartPeriod_beg}')
426    config['Files']['TarRestartPeriod_beg'] = TarRestartPeriod_beg
427
428if wu.unDefined ( 'TarRestartPeriod_end' ) :
429
430    TarRestartPeriod_end_DateEnd = TarRestartDate_end
431    TarRestartPeriod_end_DateBeg = wu.DateAddYear ( TarRestartPeriod_end_DateEnd, -PackFrequency )
432    TarRestartPeriod_end_DateBeg = wu.DatePlusOneDay ( TarRestartPeriod_end_DateBeg )
433     
434    TarRestartPeriod_end = f'{TarRestartPeriod_end_DateBeg}_{TarRestartPeriod_end_DateEnd}'
435    echo (f'Tar period for final restart : {TarRestartPeriod_end}')
436    config['Files']['TarRestartPeriod_end'] = TarRestartPeriod_end
437
438echo (f'Restart dates - Start : {TarRestartPeriod_beg}  /  End : {TarRestartPeriod_end}')
439
440if wu.unDefined ( 'tar_restart_beg' ) :
441    tar_restart_beg = os.path.join ( R_SAVE, 'RESTART', f'{JobName}_{TarRestartPeriod_beg}_restart.tar' )
442    config['Files']['tar_restart_beg'] = tar_restart_beg
443if wu.unDefined ( 'tar_restart_end' ) :
444    tar_restart_end = os.path.join ( R_SAVE, 'RESTART', f'{JobName}_{TarRestartPeriod_end}_restart.tar' )
445    config['Files']['tar_restart_end'] = tar_restart_end
446   
447echo ( f'{tar_restart_beg = }' )
448echo ( f'{tar_restart_end = }' )
449
450##-- Names of tar files with restarts
451if wu.unDefined ( 'SRF_HIS' ) : SRF_HIS = ATM_HIS
452
453if wu.unDefined ( 'tar_restart_beg_ATM' ) : tar_restart_beg_ATM = tar_restart_beg
454if wu.unDefined ( 'tar_restart_beg_DYN' ) : tar_restart_beg_DYN = tar_restart_beg
455if wu.unDefined ( 'tar_restart_beg_SRF' ) : tar_restart_beg_SRF = tar_restart_beg
456if wu.unDefined ( 'tar_restart_beg_RUN' ) : tar_restart_beg_RUN = tar_restart_beg
457if wu.unDefined ( 'tar_restart_beg_OCE' ) : tar_restart_beg_OCE = tar_restart_beg
458if wu.unDefined ( 'tar_restart_beg_ICE' ) : tar_restart_beg_ICE = tar_restart_beg
459
460if wu.unDefined ( 'tar_restart_end_ATM' ) : tar_restart_end_ATM = tar_restart_end
461if wu.unDefined ( 'tar_restart_end_DYN' ) : tar_restart_end_DYN = tar_restart_end
462if wu.unDefined ( 'tar_restart_end_SRF' ) : tar_restart_end_SRF = tar_restart_end
463if wu.unDefined ( 'tar_restart_end_RUN' ) : tar_restart_end_RUN = tar_restart_end
464if wu.unDefined ( 'tar_restart_end_OCE' ) : tar_restart_end_OCE = tar_restart_end
465if wu.unDefined ( 'tar_restart_end_ICE' ) : tar_restart_end_ICE = tar_restart_end
466
467if wu.unDefined ( 'file_ATM_beg' ) : 
468    file_ATM_beg = f'{FileDir}/ATM_{JobName}_{TarRestartDate_beg}_restartphy.nc'
469    config['Files']['file_ATM_beg'] = file_ATM_beg
470if wu.unDefined ( 'file_ATM_end' ) :
471    file_ATM_end = f'{FileDir}/ATM_{JobName}_{TarRestartDate_end}_restartphy.nc'
472    config['Files']['file_ATM_end'] = file_ATM_end
473
474liste_beg = [file_ATM_beg, ]
475liste_end = [file_ATM_end, ]
476
477if wu.unDefined ( 'file_DYN_beg' ) :
478    if LMDZ : file_DYN_beg = f'{FileDir}/ATM_{JobName}_{TarRestartDate_beg}_restart.nc'
479    if ICO  : file_DYN_beg = f'{FileDir}/ICO_{JobName}_{TarRestartDate_beg}_restart.nc'
480    liste_beg.append (file_DYN_beg)
481    config['Files']['file_DYN_beg'] = file_DYN_beg
482   
483if wu.unDefined ( 'file_DYN_end' ) : 
484    if LMDZ : file_DYN_end = f'{FileDir}/ATM_{JobName}_{TarRestartDate_end}_restart.nc'
485    if ICO  : file_DYN_end = f'{FileDir}/ICO_{JobName}_{TarRestartDate_end}_restart.nc'
486    liste_end.append ( file_DYN_end )
487    config['Files']['file_DYN_end'] = file_DYN_end
488
489if wu.unDefined ( 'file_SRF_beg' ) :
490    file_SRF_beg = f'{FileDir}/SRF_{JobName}_{TarRestartDate_beg}_sechiba_rest.nc'
491    config['Files']['file_SRF_beg'] = file_SRF_beg
492if wu.unDefined ( 'file_SRF_end' ) :
493    file_SRF_end = f'{FileDir}/SRF_{JobName}_{TarRestartDate_end}_sechiba_rest.nc'
494    config['Files']['file_SRF_end'] = file_SRF_end
495   
496liste_beg.append ( file_SRF_beg )
497liste_end.append ( file_SRF_end )
498
499echo ( f'{file_ATM_beg = }')
500echo ( f'{file_ATM_end = }')
501echo ( f'{file_DYN_beg = }')
502echo ( f'{file_DYN_end = }')
503echo ( f'{file_SRF_beg = }')
504echo ( f'{file_SRF_end = }')
505
506if ICO :
507    if wu.unDefined ('file_DYN_aire') : file_DYN_aire = os.path.join ( R_IN, 'ATM', 'GRID', ATM+'_grid.nc' )
508    config['Files']['file_DYN_aire'] = file_DYN_aire
509
510if Routing == 'SIMPLE' :
511    if wu.unDefined ( 'file_RUN_beg' ) : 
512        file_RUN_beg = f'{FileDir}/SRF_{JobName}_{TarRestartDate_beg}_routing_restart.nc'
513        config['Files']['file_RUN_beg'] = file_RUN_beg
514    if wu.unDefined ( 'file_RUN_end' ) : 
515        file_RUN_end = f'{FileDir}/SRF_{JobName}_{TarRestartDate_end}_routing_restart.nc'
516        config['Files']['file_RUN_end'] = file_RUN_end
517       
518    liste_beg.append ( file_RUN_beg )
519    liste_end.append ( file_RUN_end )
520    echo ( f'{file_RUN_beg = }' )
521    echo ( f'{file_RUN_end = }' )
522
523echo ('\nExtract restart files from tar : ATM, ICO and SRF')
524
525def extract_and_rebuild ( file_name=file_ATM_beg, tar_restart=tar_restart_end, FileDirComp=FileDir, ErrorCount=ErrorCount ) :
526    echo ( f'----------')
527    echo ( f'file to extract : {file_name = }' )
528    if os.path.exists ( os.path.join (FileDir, file_name) ) :
529        echo ( f'file found : {file_name = }' )
530    else :
531        echo ( f'file not found : {file_name = }' )
532        base_resFile = os.path.basename (file_name)
533        if os.path.exists ( tar_restart ) :
534            command =  f'cd {FileDir} ; tar xf {tar_restart} {base_resFile}'
535            echo ( f'{command = }' )
536            try : os.system ( command )
537            except :
538                if ContinueOnError :
539                    ErrorCount += 1
540                    echo ( f'****** Command failed : {command}' )
541                    echo ( f'****** Trying to continue' )
542                    echo ( ' ')
543                else :
544                    raise Exception ( f'**** command failed : {command} - Stopping' )
545            else :
546                echo ( f'tar done : {base_resFile}' )
547        else :
548            echo ( f'****** Tar restart file {tar_restart = } not found ' )
549            if ContinueOnError :
550                ErrorCount += 1
551            else : 
552                raise Exception ( f'****** tar file not found {tar_restart = } - Stopping' )
553    return ErrorCount
554 
555ErrorCount += extract_and_rebuild ( file_name=file_ATM_beg, tar_restart=tar_restart_beg_ATM, FileDirComp=FileDir )
556ErrorCount += extract_and_rebuild ( file_name=file_DYN_beg, tar_restart=tar_restart_beg_DYN, FileDirComp=FileDir )
557ErrorCount += extract_and_rebuild ( file_name=file_SRF_beg, tar_restart=tar_restart_beg_SRF, FileDirComp=FileDir )
558
559ErrorCount += extract_and_rebuild ( file_name=file_ATM_end, tar_restart=tar_restart_end_ATM, FileDirComp=FileDir )
560ErrorCount += extract_and_rebuild ( file_name=file_DYN_end, tar_restart=tar_restart_end_DYN, FileDirComp=FileDir )
561ErrorCount += extract_and_rebuild ( file_name=file_SRF_end, tar_restart=tar_restart_end_SRF, FileDirComp=FileDir )
562
563if Routing == 'SIMPLE' :
564    ErrorCount += extract_and_rebuild ( file_name=file_RUN_beg, tar_restart=tar_restart_beg_RUN, FileDirComp=FileDir )
565    ErrorCount += extract_and_rebuild ( file_name=file_RUN_end, tar_restart=tar_restart_end_RUN, FileDirComp=FileDir )
566
567##-- Exit in case of error in the opening file phase
568if ErrorCount > 0 :
569    echo ( '  ' )
570    raise Exception ( f'**** Some files missing - Stopping - {ErrorCount = }' )
571
572##
573echo ('\nOpening ATM SRF and ICO restart files')
574d_ATM_beg = xr.open_dataset ( os.path.join (FileDir, file_ATM_beg), decode_times=False, decode_cf=True ).squeeze()
575d_ATM_end = xr.open_dataset ( os.path.join (FileDir, file_ATM_end), decode_times=False, decode_cf=True ).squeeze()
576d_SRF_beg = xr.open_dataset ( os.path.join (FileDir, file_SRF_beg), decode_times=False, decode_cf=True ).squeeze()
577d_SRF_end = xr.open_dataset ( os.path.join (FileDir, file_SRF_end), decode_times=False, decode_cf=True ).squeeze()
578d_DYN_beg = xr.open_dataset ( os.path.join (FileDir, file_DYN_beg), decode_times=False, decode_cf=True ).squeeze()
579d_DYN_end = xr.open_dataset ( os.path.join (FileDir, file_DYN_end), decode_times=False, decode_cf=True ).squeeze()
580
581for var in d_SRF_beg.variables :
582    d_SRF_beg[var] = d_SRF_beg[var].where ( d_SRF_beg[var]<1.e20, 0.)
583    d_SRF_end[var] = d_SRF_end[var].where ( d_SRF_end[var]<1.e20, 0.)
584
585if Routing == 'SIMPLE' :
586    d_RUN_beg = xr.open_dataset ( os.path.join (FileDir, file_RUN_beg), decode_times=False, decode_cf=True ).squeeze()
587    d_RUN_end = xr.open_dataset ( os.path.join (FileDir, file_RUN_end), decode_times=False, decode_cf=True ).squeeze()
588
589def to_cell ( dd, newname='cell' ) :
590    '''Set space dimension to 'cell' '''
591    for oldname in [ 'cell_mesh', 'y', 'points_physiques' ] :
592        try    : dd = dd.rename ( {oldname : newname} )
593        except : pass
594    return dd
595
596d_ATM_beg = to_cell ( d_ATM_beg )
597d_ATM_end = to_cell ( d_ATM_end )
598d_SRF_beg = to_cell ( d_SRF_beg )
599d_SRF_end = to_cell ( d_SRF_end )
600d_DYN_beg = to_cell ( d_DYN_beg )
601d_DYN_end = to_cell ( d_DYN_end )
602
603if Routing == 'SIMPLE' :
604    d_RUN_beg = to_cell ( d_RUN_beg )
605    d_RUN_end = to_cell ( d_RUN_end )
606
607d_ATM_his = to_cell ( d_ATM_his )
608d_SRF_his = to_cell ( d_SRF_his )
609   
610echo ( f'{file_ATM_beg = }' )
611echo ( f'{file_ATM_end = }' )
612echo ( f'{file_DYN_beg = }' )
613echo ( f'{file_DYN_end = }' )
614echo ( f'{file_SRF_beg = }' )
615echo ( f'{file_SRF_end = }' )
616if Routing == 'SIMPLE' :
617    echo ( f'{file_RUN_beg = }' )
618    echo ( f'{file_RUN_end = }' )
619
620## Write the full configuration
621config_out = open (FullIniFile, 'w')
622config.write ( config_out )
623config_out.close ()
624
625# ATM grid with cell surfaces
626if LMDZ :
627    echo ('ATM grid with cell surfaces : LMDZ')
628    ATM_lat       = lmdz.geo2point (   rprec (d_ATM_his ['lat'])+0*rprec (d_ATM_his ['lon']), dim1D='cell' )
629    ATM_lon       = lmdz.geo2point ( 0*rprec (d_ATM_his ['lat'])+  rprec (d_ATM_his ['lon']), dim1D='cell' )
630    ATM_aire      = lmdz.geo2point ( rprec (d_ATM_his ['aire']     [0]), cumulPoles=True, dim1D='cell' )
631    ATM_fter      = lmdz.geo2point ( rprec (d_ATM_his ['fract_ter'][0]), dim1D='cell' )
632    ATM_foce      = lmdz.geo2point ( rprec (d_ATM_his ['fract_oce'][0]), dim1D='cell' )
633    ATM_fsic      = lmdz.geo2point ( rprec (d_ATM_his ['fract_sic'][0]), dim1D='cell' )
634    ATM_flic      = lmdz.geo2point ( rprec (d_ATM_his ['fract_lic'][0]), dim1D='cell' )
635    SRF_lat       = lmdz.geo2point (   rprec (d_SRF_his ['lat'])+0*rprec (d_SRF_his ['lon']), dim1D='cell' )
636    SRF_lon       = lmdz.geo2point ( 0*rprec (d_SRF_his ['lat'])+  rprec (d_SRF_his ['lon']), dim1D='cell' )
637    SRF_aire      = lmdz.geo2point ( rprec (d_SRF_his ['Areas']) * rprec (d_SRF_his ['Contfrac']), dim1D='cell', cumulPoles=True )
638    SRF_areas     = lmdz.geo2point ( rprec (d_SRF_his ['Areas'])  ,  dim1D='cell', cumulPoles=True )
639    SRF_contfrac  = lmdz.geo2point ( rprec (d_SRF_his ['Contfrac']), dim1D='cell' )
640
641if ICO :
642    if ATM_HIS == 'latlon' :
643        echo ( 'ATM areas and fractions on latlon grid' )
644        if 'lat_dom_out' in d_ATM_his.variables :
645            ATM_lat  = lmdz.geo2point (   rprec (d_ATM_his ['lat_dom_out'])+0*rprec (d_ATM_his ['lon_dom_out']), dim1D='cell' )
646            ATM_lon  = lmdz.geo2point ( 0*rprec (d_ATM_his ['lat_dom_out'])+  rprec (d_ATM_his ['lon_dom_out']), dim1D='cell' )
647        else :
648            ATM_lat  = lmdz.geo2point (   rprec (d_ATM_his ['lat'])+0*rprec (d_ATM_his ['lon']), dim1D='cell' )
649            ATM_lon  = lmdz.geo2point ( 0*rprec (d_ATM_his ['lat'])+  rprec (d_ATM_his ['lon']), dim1D='cell' )
650        ATM_aire = lmdz.geo2point ( rprec (d_ATM_his ['aire'][0]).squeeze(), cumulPoles=True, dim1D='cell' )
651        ATM_fter = lmdz.geo2point ( rprec (d_ATM_his ['fract_ter'][0]), dim1D='cell' )
652        ATM_foce = lmdz.geo2point ( rprec (d_ATM_his ['fract_oce'][0]), dim1D='cell' )
653        ATM_fsic = lmdz.geo2point ( rprec (d_ATM_his ['fract_sic'][0]), dim1D='cell' )
654        ATM_flic = lmdz.geo2point ( rprec (d_ATM_his ['fract_lic'][0]), dim1D='cell' )
655
656    if ATM_HIS == 'ico' :
657        echo ( 'ATM areas and fractions on ICO grid' )
658        ATM_aire =  rprec (d_ATM_his ['aire']     [0]).squeeze()
659        ATM_lat  =  rprec (d_ATM_his ['lat']         )
660        ATM_lon  =  rprec (d_ATM_his ['lon']         )
661        ATM_fter =  rprec (d_ATM_his ['fract_ter'][0])
662        ATM_foce =  rprec (d_ATM_his ['fract_oce'][0])
663        ATM_fsic =  rprec (d_ATM_his ['fract_sic'][0])
664        ATM_flic =  rprec (d_ATM_his ['fract_lic'][0])
665
666    if SRF_HIS == 'latlon' :
667        echo ( 'SRF areas and fractions on latlon grid' )
668        if 'lat_domain_landpoints_out' in d_SRF_his  : 
669            SRF_lat  = lmdz.geo2point (   rprec (d_SRF_his ['lat_domain_landpoints_out'])+0*rprec (d_SRF_his ['lon_domain_landpoints_out']), dim1D='cell' )
670            SRF_lon  = lmdz.geo2point ( 0*rprec (d_SRF_his ['lat_domain_landpoints_out'])+  rprec (d_SRF_his ['lon_domain_landpoints_out']), dim1D='cell' )
671        else : 
672            if 'lat_domain_landpoints_out' in d_SRF_his :
673                SRF_lat  = lmdz.geo2point (   rprec (d_SRF_his ['lat_dom_out'])+0*rprec (d_SRF_his ['lon_dom_out']), dim1D='cell' )
674                SRF_lon  = lmdz.geo2point ( 0*rprec (d_SRF_his ['lat_dom_out'])+  rprec (d_SRF_his ['lon_dom_out']), dim1D='cell' )
675            else :
676                SRF_lat  = lmdz.geo2point (   rprec (d_SRF_his ['lat'])+0*rprec (d_SRF_his ['lon']), dim1D='cell' )
677                SRF_lon  = lmdz.geo2point ( 0*rprec (d_SRF_his ['lat'])+  rprec (d_SRF_his ['lon']), dim1D='cell' )
678               
679        SRF_areas     = lmdz.geo2point ( rprec (d_SRF_his ['Areas']   )   , dim1D='cell', cumulPoles=True )
680        SRF_areafrac  = lmdz.geo2point ( rprec (d_SRF_his ['AreaFrac'])   , dim1D='cell', cumulPoles=True )
681        SRF_contfrac  = lmdz.geo2point ( rprec (d_SRF_his ['Contfrac'])   , dim1D='cell', cumulPoles=True )
682        SRF_aire = SRF_areafrac
683 
684    if SRF_HIS == 'ico' :
685        echo ( 'SRF areas and fractions on latlon grid' )
686        SRF_lat       =  rprec (d_SRF_his ['lat']     )
687        SRF_lon       =  rprec (d_SRF_his ['lon']     )
688        SRF_areas     =  rprec (d_SRF_his ['Areas']   ) 
689        SRF_contfrac  =  rprec (d_SRF_his ['Contfrac'])
690        SRF_aire      =  SRF_areas * SRF_contfrac
691
692ATM_fsea      = ATM_foce + ATM_fsic
693ATM_flnd      = ATM_fter + ATM_flic
694ATM_aire_fter = ATM_aire * ATM_fter
695ATM_aire_flic = ATM_aire * ATM_flic
696ATM_aire_fsic = ATM_aire * ATM_fsic
697ATM_aire_foce = ATM_aire * ATM_foce
698ATM_aire_flnd = ATM_aire * ATM_flnd
699ATM_aire_fsea = ATM_aire * ATM_fsea
700
701#SRF_aire = SRF_aire.where ( np.abs (SRF_aire) < 1E15, 0. )
702
703## Write the full configuration
704config_out = open (FullIniFile, 'w')
705config.write ( config_out )
706config_out.close ()
707           
708if ICO :
709    # Area on icosahedron grid
710    d_DYN_aire = xr.open_dataset ( file_DYN_aire, decode_times=False ).squeeze()
711
712    if SortIco : 
713        # Creation d'une clef de tri pour le fichier aire
714        DYN_aire_keysort = np.lexsort ( (d_DYN_aire['lat'], d_DYN_aire['lon']) )
715    else : 
716        DYN_aire_keysort = np.arange ( len ( d_DYN_aire['lat'] ) )
717           
718    DYN_lat = d_DYN_aire['lat']
719    DYN_lon = d_DYN_aire['lon']
720
721    DYN_aire = d_DYN_aire['aire']
722    DYN_fsea = d_DYN_aire['fract_oce'] + d_DYN_aire['fract_sic']
723    DYN_flnd = 1.0 - DYN_fsea
724    DYN_fter = d_ATM_beg['FTER']
725    DYN_flic = d_ATM_beg['FLIC']
726    DYN_aire_fter = DYN_aire * DYN_fter
727   
728if LMDZ :
729    # Area on lon/lat grid
730    DYN_aire = ATM_aire
731    DYN_fsea = ATM_fsea
732    DYN_flnd = ATM_flnd
733    DYN_fter = rprec (d_ATM_beg['FTER'])
734    DYN_flic = rprec (d_ATM_beg['FLIC'])
735    DYN_aire_fter = DYN_aire * DYN_fter
736
737# Functions computing integrals and sum
738def DYN_stock_int (stock) :
739    '''Integrate (* surface) stock on atmosphere grid'''
740    DYN_stock_int  = wu.Psum ( (stock * DYN_aire).to_masked_array().ravel() ) 
741    return DYN_stock_int
742
743def ATM_flux_int (flux) :
744    '''Integrate (* time * surface) flux on atmosphere grid'''
745    ATM_flux_int  = wu.Psum ( (flux * dtime_per_sec * ATM_aire).to_masked_array().ravel() )
746    return ATM_flux_int
747
748def LIC_flux_int (flux) :
749    '''Integrate (* time * surface) flux on land ice grid'''
750    LIC_flux_int  = wu.Psum ( (flux * dtime_per_sec * ATM_aire_flic).to_masked_array().ravel() )
751    return LIC_flux_int
752
753def SRF_stock_int (stock) :
754    '''Integrate (* surface) stock on land grid'''
755    SRF_stock_int  = wu.Ksum (  ( (stock * DYN_aire_fter).to_masked_array().ravel()) )
756    return SRF_stock_int
757
758def SRF_flux_int (flux) :
759    '''Integrate (* time * surface) flux on land grid'''
760    SRF_flux_int  = wu.Psum (  (flux * dtime_per_sec * SRF_aire).to_masked_array().ravel() )
761    return SRF_flux_int
762
763def ONE_stock_int (stock) :
764    '''Sum stock '''
765    ONE_stock_int  = wu.Psum ( stock.to_masked_array().ravel() )
766    return ONE_stock_int
767
768def ONE_flux_int (flux) :
769    '''Integrate (* time) flux on area=1 grid '''
770    ONE_flux_int  = wu.Psum ( (flux * dtime_per_sec ).to_masked_array().ravel() )
771    return ONE_flux_int
772
773def Sprec ( tlist ) :
774    '''Accurate sum of list of scalar elements'''
775    return wu.Psum ( np.array ( tlist) )
776
777ATM_aire_sea     = ATM_aire * ATM_fsea
778
779ATM_aire_tot     = ONE_stock_int (ATM_aire)
780ATM_aire_sea_tot = ONE_stock_int (ATM_aire_fsea)
781ATM_aire_ter_tot = ONE_stock_int (ATM_aire_fter)
782ATM_aire_lic_tot = ONE_stock_int (ATM_aire_flic)
783
784DYN_aire_tot     = ONE_stock_int ( DYN_aire )
785SRF_aire_tot     = ONE_stock_int ( SRF_aire )
786
787echo ('')
788echo ( f'ATM DYN : Area of atmosphere        : {DYN_aire_tot:18.9e}' )
789echo ( f'ATM HIS : Area of atmosphere        : {ATM_aire_tot:18.9e}' )
790echo ( f'ATM HIS : Area of ter in atmosphere : {ATM_aire_ter_tot:18.9e}' )
791echo ( f'ATM HIS : Area of lic in atmosphere : {ATM_aire_lic_tot:18.9e}' )
792echo ( f'ATM SRF : Area of atmosphere        : {SRF_aire_tot:18.9e}' )
793echo ('')
794echo ( 'ATM DYN : Area of atmosphere/(4pi R^2)        : {:18.9f}'.format(DYN_aire_tot/(Ra*Ra*4*np.pi) ) )
795echo ( 'ATM HIS : Area of atmosphere/(4pi R^2)        : {:18.9f}'.format(ATM_aire_tot/(Ra*Ra*4*np.pi) ) )
796echo ( 'ATM HIS : Area of ter in atmosphere/(4pi R^2) : {:18.9f}'.format(ATM_aire_ter_tot/(Ra*Ra*4*np.pi) ) )
797echo ( 'ATM SRF : Area of atmosphere/(4pi R^2)        : {:18.9f}'.format(SRF_aire_tot/(Ra*Ra*4*np.pi) ) )
798echo ('')
799echo ( f'ATM SRF : Area of atmosphere (no contfrac): {ONE_stock_int (SRF_areas):18.9e}' )
800
801
802if (  np.abs (ATM_aire_tot/(Ra*Ra*4*np.pi) - 1.0) > 0.01 ) :
803    raise Exception ('Error of atmosphere surface interpolated on lon/lat grid')
804
805echo ( '\n====================================================================================' )
806echo ( f'-- ATM changes in stores  -- {Title} ' )
807
808#-- Change in precipitable water from the atmosphere daily and monthly files
809#-- Compute sum weighted by gridcell area (kg/m2) then convert to Sv
810
811echo ( 'ATM vertical grid' )
812ATM_Ahyb = d_ATM_his['Ahyb'].squeeze()
813ATM_Bhyb = d_ATM_his['Bhyb'].squeeze()
814
815echo ( 'Surface pressure' )
816if ICO :
817    DYN_psol_beg = d_DYN_beg['ps']
818    DYN_psol_end = d_DYN_end['ps']
819if LMDZ : 
820    DYN_psol_beg = lmdz.geo2point ( d_DYN_beg['ps'].isel(rlonv=slice(0,-1)), dim1D='cell' )
821    DYN_psol_end = lmdz.geo2point ( d_DYN_end['ps'].isel(rlonv=slice(0,-1)), dim1D='cell' )
822   
823echo ( '3D Pressure at the interface layers (not scalar points)' )
824DYN_pres_beg = ATM_Ahyb + ATM_Bhyb * DYN_psol_beg
825DYN_pres_end = ATM_Ahyb + ATM_Bhyb * DYN_psol_end
826
827echo ( 'Check computation of pressure levels' )
828
829ind = np.empty (8)
830
831ind[0] = (DYN_pres_beg[ 0]-DYN_psol_beg).min().item()
832ind[1] = (DYN_pres_beg[ 0]-DYN_psol_beg).max().item()
833ind[2] = (DYN_pres_beg[-1]).min().item()
834ind[3] = (DYN_pres_beg[-1]).max().item()
835ind[4] = (DYN_pres_end[ 0]-DYN_psol_end).min().item()
836ind[5] = (DYN_pres_end[ 0]-DYN_psol_end).max().item()
837ind[6] = (DYN_pres_end[-1]).min().item()
838ind[7] = (DYN_pres_end[-1]).max().item()
839
840if any ( ind != 0) :
841    echo ( 'All values should be zero' )
842    echo ( f'(DYN_pres_beg[ 0]-DYN_psol_beg).min().item() = {ind[0]}' )
843    echo ( f'(DYN_pres_beg[ 0]-DYN_psol_beg).max().item() = {ind[1]}' )
844    echo ( f'(DYN_pres_beg[-1]).min().item()              = {ind[2]}' )
845    echo ( f'(DYN_pres_beg[-1]).max().item()              = {ind[3]}' )
846    echo ( f'(DYN_pres_end[ 0]-DYN_psol_end).min().item() = {ind[4]}' )
847    echo ( f'(DYN_pres_end[ 0]-DYN_psol_end).max().item() = {ind[5]}' )
848    echo ( f'(DYN_pres_end[-1]).min().item()              = {ind[6]}' )
849    echo ( f'(DYN_pres_end[-1]).max().item()              = {ind[7]}' )
850    raise Exception
851   
852klevp1 = ATM_Bhyb.shape[-1]
853cell   = DYN_psol_beg.shape[-1]
854klev   = klevp1 - 1
855
856echo ( 'Layer thickness (pressure)' )
857DYN_mass_beg = xr.DataArray ( np.empty( (klev, cell)), dims = ('sigs', 'cell'), coords=(np.arange(klev), np.arange(cell) ) )
858DYN_mass_end = xr.DataArray ( np.empty( (klev, cell)), dims = ('sigs', 'cell'), coords=(np.arange(klev), np.arange(cell) ) )
859   
860for k in np.arange (klev) :
861    DYN_mass_beg[k,:] = ( DYN_pres_beg[k,:] - DYN_pres_beg[k+1,:] ) / Grav
862    DYN_mass_end[k,:] = ( DYN_pres_end[k,:] - DYN_pres_end[k+1,:] ) / Grav
863
864DYN_mass_beg_2D = DYN_mass_beg.sum (dim='sigs')
865DYN_mass_end_2D = DYN_mass_end.sum (dim='sigs')
866
867DYN_mas_air_beg = DYN_stock_int ( DYN_mass_beg_2D )
868DYN_mas_air_end = DYN_stock_int ( DYN_mass_end_2D )
869
870echo ( 'Vertical and horizontal integral, and sum of liquid, solid and vapor water phases' )
871if LMDZ :
872    if 'H2Ov' in d_DYN_beg.variables :
873        echo ('reading LATLON : H2Ov, H2Ol, H2Oi' )
874        DYN_wat_beg = lmdz.geo3point ( d_DYN_beg['H2Ov'] + d_DYN_beg['H2Ol'] + d_DYN_beg['H2Oi'].isel(rlonv=slice(0,-1) ), dim1D='cell' )
875        DYN_wat_end = lmdz.geo3point ( d_DYN_end['H2Ov'] + d_DYN_end['H2Ol'] + d_DYN_end['H2Oi'].isel(rlonv=slice(0,-1) ), dim1D='cell' )
876    if 'H2Ov_g' in d_DYN_beg.variables :
877        echo ('reading LATLON : H2O_g, H2O_l, H2O_s' )
878        DYN_wat_beg = lmdz.geo3point ( (d_DYN_beg['H2O_g'] + d_DYN_beg['H2O_l'] + d_DYN_beg['H2O_s']).isel(rlonv=slice(0,-1) ), dim1D='cell' )
879        DYN_wat_end = lmdz.geo3point ( (d_DYN_end['H2O_g'] + d_DYN_end['H2O_l'] + d_DYN_end['H2O_s']).isel(rlonv=slice(0,-1) ), dim1D='cell' )
880if ICO :
881    if 'H2Ov_g' in d_DYN_beg.variables :
882        echo ('reading ICO : H2O_g, H2O_l, H2O_s' )
883        DYN_wat_beg = (d_DYN_beg['H2O_g'] + d_DYN_beg['H2O_l'] + d_DYN_beg['H2O_s'])
884        DYN_wat_end = (d_DYN_end['H2O_g'] + d_DYN_end['H2O_l'] + d_DYN_end['H2O_s'])
885    elif 'H2O_g' in d_DYN_beg.variables :
886        echo ('reading ICO : H2O_g, H2O_l, H2O_s' )
887        DYN_wat_beg = (d_DYN_beg['H2O_g'] + d_DYN_beg['H2O_l'] + d_DYN_beg['H2O_s'])
888        DYN_wat_end = (d_DYN_end['H2O_g'] + d_DYN_end['H2O_l'] + d_DYN_end['H2O_s'])
889    elif 'q' in d_DYN_beg.variables :
890        echo ('reading ICO : q' )
891        DYN_wat_beg = (d_DYN_beg['q'].isel(nq=0) + d_DYN_beg['q'].isel(nq=1) + d_DYN_beg['q'].isel(nq=2) )
892        DYN_wat_end = (d_DYN_end['q'].isel(nq=0) + d_DYN_end['q'].isel(nq=1) + d_DYN_end['q'].isel(nq=2) )
893
894if 'lev' in DYN_wat_beg.dims : 
895    DYN_wat_beg = DYN_wat_beg.rename ( {'lev':'sigs'} )
896    DYN_wat_end = DYN_wat_end.rename ( {'lev':'sigs'} )
897   
898echo ( 'Compute water content : vertical and horizontal integral' )
899
900DYN_wat_beg_2D =  (DYN_mass_beg * DYN_wat_beg).sum (dim='sigs')
901DYN_wat_end_2D =  (DYN_mass_end * DYN_wat_end).sum (dim='sigs')
902
903DYN_mas_wat_beg = DYN_stock_int ( DYN_wat_beg_2D )
904DYN_mas_wat_end = DYN_stock_int ( DYN_wat_end_2D )
905
906echo ( 'Variation of water content' )
907dDYN_mas_wat = DYN_mas_wat_end - DYN_mas_wat_beg
908
909echo ( f'\nChange of atmosphere water content (dynamics)  -- {Title} ' )
910echo ( '------------------------------------------------------------------------------------' )
911echo ( 'DYN_mas_air_beg = {:12.6e} kg | DYN_mas_air_end = {:12.6e} kg'.format (DYN_mas_air_beg, DYN_mas_air_end) )
912echo ( 'DYN_mas_wat_beg = {:12.6e} kg | DYN_mas_wat_end = {:12.6e} kg'.format (DYN_mas_wat_beg, DYN_mas_wat_end) )
913prtFlux ( 'dMass (atm)  ', dDYN_mas_wat, 'e', True )
914
915ATM_sno_beg = d_ATM_beg['SNOW01']*d_ATM_beg['FTER'] + d_ATM_beg['SNOW02']*d_ATM_beg['FLIC'] + \
916              d_ATM_beg['SNOW03']*d_ATM_beg['FOCE'] + d_ATM_beg['SNOW04']*d_ATM_beg['FSIC']
917ATM_sno_end = d_ATM_end['SNOW01']*d_ATM_end['FTER'] + d_ATM_end['SNOW02']*d_ATM_end['FLIC'] + \
918              d_ATM_end['SNOW03']*d_ATM_end['FOCE'] + d_ATM_end['SNOW04']*d_ATM_end['FSIC']
919
920ATM_qs_beg  = d_ATM_beg['QS01']  *d_ATM_beg['FTER'] + d_ATM_beg['QS02']  *d_ATM_beg['FLIC'] + \
921              d_ATM_beg['QS03']  *d_ATM_beg['FOCE'] + d_ATM_beg['QS04']  *d_ATM_beg['FSIC']
922ATM_qs_end  = d_ATM_end['QS01']  *d_ATM_end['FTER'] + d_ATM_end['QS02']  *d_ATM_end['FLIC'] + \
923              d_ATM_end['QS03']  *d_ATM_end['FOCE'] + d_ATM_end['QS04']  *d_ATM_end['FSIC']
924
925ATM_qsol_beg     = d_ATM_beg['QSOL']
926ATM_qsol_end     = d_ATM_end['QSOL']
927
928LIC_sno_beg      = d_ATM_beg['SNOW02']*d_ATM_beg['FLIC']
929LIC_sno_end      = d_ATM_end['SNOW02']*d_ATM_end['FLIC']
930
931LIC_runlic0_beg  = d_ATM_beg['RUNOFFLIC0']
932LIC_runlic0_end  = d_ATM_end['RUNOFFLIC0']
933
934ATM_qs01_beg     = d_ATM_beg['QS01'] * d_ATM_beg['FTER']
935ATM_qs02_beg     = d_ATM_beg['QS02'] * d_ATM_beg['FLIC']
936ATM_qs03_beg     = d_ATM_beg['QS03'] * d_ATM_beg['FOCE']
937ATM_qs04_beg     = d_ATM_beg['QS04'] * d_ATM_beg['FSIC']
938
939ATM_qs01_end     = d_ATM_end['QS01'] * d_ATM_end['FTER']
940ATM_qs02_end     = d_ATM_end['QS02'] * d_ATM_end['FLIC']
941ATM_qs03_end     = d_ATM_end['QS03'] * d_ATM_end['FOCE']
942ATM_qs04_end     = d_ATM_end['QS04'] * d_ATM_end['FSIC'] 
943
944if ICO :
945     ATM_sno_beg     = ATM_sno_beg   
946     ATM_sno_end     = ATM_sno_end   
947     ATM_qs_beg      = ATM_qs_beg     
948     ATM_qs_end      = ATM_qs_end     
949     ATM_qsol_beg    = ATM_qsol_beg   
950     ATM_qs01_beg    = ATM_qs01_beg   
951     ATM_qs02_beg    = ATM_qs02_beg   
952     ATM_qs03_beg    = ATM_qs03_beg   
953     ATM_qs04_beg    = ATM_qs04_beg   
954     ATM_qsol_end    = ATM_qsol_end   
955     ATM_qs01_end    = ATM_qs01_end   
956     ATM_qs02_end    = ATM_qs02_end   
957     ATM_qs03_end    = ATM_qs03_end   
958     ATM_qs04_end    = ATM_qs04_end   
959     LIC_sno_beg     = LIC_sno_beg   
960     LIC_sno_end     = LIC_sno_end   
961     LIC_runlic0_beg = LIC_runlic0_beg
962     LIC_runlic0_end = LIC_runlic0_end
963   
964LIC_qs_beg = ATM_qs02_beg
965LIC_qs_end = ATM_qs02_end
966
967ATM_mas_sno_beg     = DYN_stock_int ( ATM_sno_beg  )
968ATM_mas_sno_end     = DYN_stock_int ( ATM_sno_end  )
969
970ATM_mas_qs_beg      = DYN_stock_int ( ATM_qs_beg   )
971ATM_mas_qs_end      = DYN_stock_int ( ATM_qs_end   )
972ATM_mas_qsol_beg    = DYN_stock_int ( ATM_qsol_beg )
973ATM_mas_qs01_beg    = DYN_stock_int ( ATM_qs01_beg )
974ATM_mas_qs02_beg    = DYN_stock_int ( ATM_qs02_beg )
975ATM_mas_qs03_beg    = DYN_stock_int ( ATM_qs03_beg )
976ATM_mas_qs04_beg    = DYN_stock_int ( ATM_qs04_beg )
977ATM_mas_qsol_end    = DYN_stock_int ( ATM_qsol_end )
978ATM_mas_qs01_end    = DYN_stock_int ( ATM_qs01_end )
979ATM_mas_qs02_end    = DYN_stock_int ( ATM_qs02_end )
980ATM_mas_qs03_end    = DYN_stock_int ( ATM_qs03_end )
981ATM_mas_qs04_end    = DYN_stock_int ( ATM_qs04_end )
982
983LIC_mas_sno_beg     = DYN_stock_int ( LIC_sno_beg     )
984LIC_mas_sno_end     = DYN_stock_int ( LIC_sno_end     )
985LIC_mas_runlic0_beg = DYN_stock_int ( LIC_runlic0_beg )
986LIC_mas_runlic0_end = DYN_stock_int ( LIC_runlic0_end )
987
988LIC_mas_qs_beg  = ATM_mas_qs02_beg
989LIC_mas_qs_end  = ATM_mas_qs02_end
990LIC_mas_wat_beg = LIC_mas_qs_beg + LIC_mas_sno_beg
991LIC_mas_wat_end = LIC_mas_qs_end + LIC_mas_sno_end
992
993dATM_mas_sno  = ATM_mas_sno_end  - ATM_mas_sno_beg
994dATM_mas_qs   = ATM_mas_qs_end   - ATM_mas_qs_beg
995dATM_mas_qsol = ATM_mas_qsol_end - ATM_mas_qsol_beg
996
997dATM_mas_qs01 = ATM_mas_qs01_end - ATM_mas_qs01_beg
998dATM_mas_qs02 = ATM_mas_qs02_end - ATM_mas_qs02_beg
999dATM_mas_qs03 = ATM_mas_qs03_end - ATM_mas_qs03_beg
1000dATM_mas_qs04 = ATM_mas_qs04_end - ATM_mas_qs04_beg
1001
1002dLIC_mas_qs      = LIC_mas_qs_end      - LIC_mas_qs_beg
1003dLIC_mas_sno     = LIC_mas_sno_end     - LIC_mas_sno_beg
1004dLIC_mas_runlic0 = LIC_mas_runlic0_end - LIC_mas_runlic0_beg
1005
1006dLIC_mas_wat     = dLIC_mas_qs + dLIC_mas_sno # + dLIC_mas_runlic0
1007
1008echo ( f'\nChange of atmosphere snow content (Land ice) -- {Title} ' )
1009echo ( '------------------------------------------------------------------------------------' )
1010echo ( 'ATM_mas_sno_beg  = {:12.6e} kg | ATM_mas_sno_end  = {:12.6e} kg'.format (ATM_mas_sno_beg, ATM_mas_sno_end) )
1011prtFlux ( 'dMass (neige atm) ', dATM_mas_sno  , 'e', True  )
1012
1013echo ( f'\nChange of soil humidity content -- {Title} ' )
1014echo ( '------------------------------------------------------------------------------------' )
1015echo ( 'ATM_mas_qs_beg  = {:12.6e} kg | ATM_mas_qs_end  = {:12.6e} kg'.format (ATM_mas_qs_beg, ATM_mas_qs_end) )
1016prtFlux ( 'dMass (neige atm) ', dATM_mas_qs, 'e', True )
1017
1018echo ( f'\nChange of atmosphere water+snow content -- {Title}  ' )
1019echo ( '------------------------------------------------------------------------------------' )
1020prtFlux ( 'dMass (eau + neige atm) ', dDYN_mas_wat + dATM_mas_sno , 'e', True)
1021
1022echo ( '\n====================================================================================' )
1023echo ( f'-- SRF changes  -- {Title} ' )
1024
1025if Routing == 'SIMPLE' :
1026    RUN_mas_wat_fast_beg   = ONE_stock_int ( d_RUN_beg ['fast_reservoir']   )
1027    RUN_mas_wat_slow_beg   = ONE_stock_int ( d_RUN_beg ['slow_reservoir']   )
1028    RUN_mas_wat_stream_beg = ONE_stock_int ( d_RUN_beg ['stream_reservoir'] )
1029   
1030    RUN_mas_wat_flood_beg  = ONE_stock_int ( d_SRF_beg ['floodres']  )
1031    RUN_mas_wat_lake_beg   = ONE_stock_int ( d_SRF_beg ['lakeres']   )
1032    RUN_mas_wat_pond_beg   = ONE_stock_int ( d_SRF_beg ['pondres']   )
1033   
1034    RUN_mas_wat_fast_end   = ONE_stock_int ( d_RUN_end ['fast_reservoir']   )
1035    RUN_mas_wat_slow_end   = ONE_stock_int ( d_RUN_end ['slow_reservoir']   )
1036    RUN_mas_wat_stream_end = ONE_stock_int ( d_RUN_end ['stream_reservoir'] )
1037   
1038    RUN_mas_wat_flood_end  = ONE_stock_int ( d_SRF_end ['floodres']  )
1039    RUN_mas_wat_lake_end   = ONE_stock_int ( d_SRF_end ['lakeres']   )
1040    RUN_mas_wat_pond_end   = ONE_stock_int ( d_SRF_end ['pondres']   )
1041
1042if Routing == 'SECHIBA' :
1043    RUN_mas_wat_fast_beg   = ONE_stock_int ( d_SRF_beg ['fastres']   )
1044    RUN_mas_wat_slow_beg   = ONE_stock_int ( d_SRF_beg ['slowres']   )
1045    RUN_mas_wat_stream_beg = ONE_stock_int ( d_SRF_beg ['streamres'] )
1046    RUN_mas_wat_flood_beg  = ONE_stock_int ( d_SRF_beg ['floodres']  )
1047    RUN_mas_wat_lake_beg   = ONE_stock_int ( d_SRF_beg ['lakeres']   )
1048    RUN_mas_wat_pond_beg   = ONE_stock_int ( d_SRF_beg ['pondres']   )
1049   
1050    RUN_mas_wat_fast_end   = ONE_stock_int ( d_SRF_end ['fastres']   )
1051    RUN_mas_wat_slow_end   = ONE_stock_int ( d_SRF_end ['slowres']   )
1052    RUN_mas_wat_stream_end = ONE_stock_int ( d_SRF_end ['streamres'] )
1053    RUN_mas_wat_flood_end  = ONE_stock_int ( d_SRF_end ['floodres']  )
1054    RUN_mas_wat_lake_end   = ONE_stock_int ( d_SRF_end ['lakeres']   )
1055    RUN_mas_wat_pond_end   = ONE_stock_int ( d_SRF_end ['pondres']   )
1056
1057RUN_mas_wat_beg = Sprec ( [RUN_mas_wat_fast_beg , RUN_mas_wat_slow_beg, RUN_mas_wat_stream_beg,
1058                           RUN_mas_wat_flood_beg, RUN_mas_wat_lake_beg, RUN_mas_wat_pond_beg] )
1059                 
1060RUN_mas_wat_end = Sprec ( [RUN_mas_wat_fast_end  , RUN_mas_wat_slow_end , RUN_mas_wat_stream_end,
1061                           RUN_mas_wat_flood_end , RUN_mas_wat_lake_end , RUN_mas_wat_pond_end] )
1062
1063dRUN_mas_wat_fast   = RUN_mas_wat_fast_end   - RUN_mas_wat_fast_beg
1064dRUN_mas_wat_slow   = RUN_mas_wat_slow_end   - RUN_mas_wat_slow_beg
1065dRUN_mas_wat_stream = RUN_mas_wat_stream_end - RUN_mas_wat_stream_beg
1066dRUN_mas_wat_flood  = RUN_mas_wat_flood_end  - RUN_mas_wat_flood_beg
1067dRUN_mas_wat_lake   = RUN_mas_wat_lake_end   - RUN_mas_wat_lake_beg
1068dRUN_mas_wat_pond   = RUN_mas_wat_pond_end   - RUN_mas_wat_pond_beg
1069
1070dRUN_mas_wat        = RUN_mas_wat_end        - RUN_mas_wat_beg
1071
1072echo ( f'\nRunoff reservoirs -- {Title} ')
1073echo ( f'------------------------------------------------------------------------------------' )
1074echo ( f'RUN_mas_wat_fast_beg   = {RUN_mas_wat_fast_beg  :12.6e} kg | RUN_mas_wat_fast_end   = {RUN_mas_wat_fast_end  :12.6e} kg ' )
1075echo ( f'RUN_mas_wat_slow_beg   = {RUN_mas_wat_slow_beg  :12.6e} kg | RUN_mas_wat_slow_end   = {RUN_mas_wat_slow_end  :12.6e} kg ' )
1076echo ( f'RUN_mas_wat_stream_beg = {RUN_mas_wat_stream_beg:12.6e} kg | RUN_mas_wat_stream_end = {RUN_mas_wat_stream_end:12.6e} kg ' )
1077echo ( f'RUN_mas_wat_flood_beg  = {RUN_mas_wat_flood_beg :12.6e} kg | RUN_mas_wat_flood_end  = {RUN_mas_wat_flood_end :12.6e} kg ' )
1078echo ( f'RUN_mas_wat_lake_beg   = {RUN_mas_wat_lake_beg  :12.6e} kg | RUN_mas_wat_lake_end   = {RUN_mas_wat_lake_end  :12.6e} kg ' )
1079echo ( f'RUN_mas_wat_pond_beg   = {RUN_mas_wat_pond_beg  :12.6e} kg | RUN_mas_wat_pond_end   = {RUN_mas_wat_pond_end  :12.6e} kg ' )
1080echo ( f'RUN_mas_wat_beg        = {RUN_mas_wat_beg       :12.6e} kg | RUN_mas_wat_end        = {RUN_mas_wat_end       :12.6e} kg ' )
1081
1082echo ( '------------------------------------------------------------------------------------' )
1083
1084prtFlux ( 'dMass (fast)   ', dRUN_mas_wat_fast  , 'e', True )
1085prtFlux ( 'dMass (slow)   ', dRUN_mas_wat_slow  , 'e', True )
1086prtFlux ( 'dMass (stream) ', dRUN_mas_wat_stream, 'e', True )
1087prtFlux ( 'dMass (flood)  ', dRUN_mas_wat_flood , 'e', True )
1088prtFlux ( 'dMass (lake)   ', dRUN_mas_wat_lake  , 'e', True )
1089prtFlux ( 'dMass (pond)   ', dRUN_mas_wat_pond  , 'e', True )
1090prtFlux ( 'dMass (all)    ', dRUN_mas_wat       , 'e', True )
1091
1092echo ( f'\nWater content in routing  -- {Title} ' )
1093echo ( '------------------------------------------------------------------------------------' )
1094echo ( f'RUN_mas_wat_beg = {RUN_mas_wat_end:12.6e} kg | RUN_mas_wat_end = {RUN_mas_wat_end:12.6e} kg' )
1095prtFlux ( 'dMass (routing) ', dRUN_mas_wat , 'e', True   )
1096
1097echo ( '\n====================================================================================' )
1098print (f'Reading SRF restart')
1099SRF_tot_watveg_beg  = d_SRF_beg['tot_watveg_beg']  ; SRF_tot_watveg_beg  = SRF_tot_watveg_beg .where (SRF_tot_watveg_beg  < 1E15, 0.)
1100SRF_tot_watsoil_beg = d_SRF_beg['tot_watsoil_beg'] ; SRF_tot_watsoil_beg = SRF_tot_watsoil_beg.where (SRF_tot_watsoil_beg < 1E15, 0.)
1101SRF_snow_beg        = d_SRF_beg['snow_beg']        ; SRF_snow_beg        = SRF_snow_beg       .where (SRF_snow_beg        < 1E15, 0.)
1102SRF_lakeres_beg     = d_SRF_beg['lakeres']         ; SRF_lakeres_beg     = SRF_lakeres_beg    .where (SRF_lakeres_beg     < 1E15, 0.)
1103
1104SRF_tot_watveg_end  = d_SRF_end['tot_watveg_beg']  ; SRF_tot_watveg_end  = SRF_tot_watveg_end .where (SRF_tot_watveg_end  < 1E15, 0.)
1105SRF_tot_watsoil_end = d_SRF_end['tot_watsoil_beg'] ; SRF_tot_watsoil_end = SRF_tot_watsoil_end.where (SRF_tot_watsoil_end < 1E15, 0.)
1106SRF_snow_end        = d_SRF_end['snow_beg']        ; SRF_snow_end        = SRF_snow_end       .where (SRF_snow_end        < 1E15, 0.)
1107SRF_lakeres_end     = d_SRF_end['lakeres']         ; SRF_lakeres_end     = SRF_lakeres_end    .where (SRF_lakeres_end     < 1E15, 0.)
1108
1109if LMDZ :
1110    SRF_tot_watveg_beg  = lmdz.geo2point (SRF_tot_watveg_beg , dim1D='cell')
1111    SRF_tot_watsoil_beg = lmdz.geo2point (SRF_tot_watsoil_beg, dim1D='cell')
1112    SRF_snow_beg        = lmdz.geo2point (SRF_snow_beg       , dim1D='cell')
1113    SRF_lakeres_beg     = lmdz.geo2point (SRF_lakeres_beg    , dim1D='cell')
1114    SRF_tot_watveg_end  = lmdz.geo2point (SRF_tot_watveg_end , dim1D='cell')
1115    SRF_tot_watsoil_end = lmdz.geo2point (SRF_tot_watsoil_end, dim1D='cell')
1116    SRF_snow_end        = lmdz.geo2point (SRF_snow_end       , dim1D='cell')
1117    SRF_lakeres_end     = lmdz.geo2point (SRF_lakeres_end    , dim1D='cell')
1118
1119
1120# Stock dSoilHum dInterce dSWE dStream dFastR dSlowR dLake dPond dFlood
1121
1122SRF_wat_beg = SRF_tot_watveg_beg + SRF_tot_watsoil_beg + SRF_snow_beg
1123SRF_wat_end = SRF_tot_watveg_end + SRF_tot_watsoil_end + SRF_snow_end
1124
1125echo ( '\n====================================================================================' )
1126print ('Computing integrals')
1127
1128print ( ' 1/8', end='' ) ; sys.stdout.flush ()
1129SRF_mas_watveg_beg   = SRF_stock_int ( SRF_tot_watveg_beg  )
1130print ( ' 2/8', end='' ) ; sys.stdout.flush ()
1131SRF_mas_watsoil_beg  = SRF_stock_int ( SRF_tot_watsoil_beg )
1132print ( ' 3/8', end='' ) ; sys.stdout.flush ()
1133SRF_mas_snow_beg     = SRF_stock_int ( SRF_snow_beg        )
1134print ( ' 4/8', end='' ) ; sys.stdout.flush ()
1135SRF_mas_lake_beg     = ONE_stock_int ( SRF_lakeres_beg     )
1136print ( ' 5/8', end='' ) ; sys.stdout.flush ()
1137
1138SRF_mas_watveg_end   = SRF_stock_int ( SRF_tot_watveg_end  )
1139print ( ' 6/8', end='' ) ; sys.stdout.flush ()
1140SRF_mas_watsoil_end  = SRF_stock_int ( SRF_tot_watsoil_end )
1141print ( ' 7/8', end='' ) ; sys.stdout.flush ()
1142SRF_mas_snow_end     = SRF_stock_int ( SRF_snow_end        )
1143print ( ' 8/8', end='' ) ; sys.stdout.flush ()
1144SRF_mas_lake_end     = ONE_stock_int ( SRF_lakeres_end     )
1145
1146print (' -- ') ; sys.stdout.flush ()
1147
1148dSRF_mas_watveg   = Sprec ( [SRF_mas_watveg_end , -SRF_mas_watveg_beg] )
1149dSRF_mas_watsoil  = Sprec ( [SRF_mas_watsoil_end, -SRF_mas_watsoil_beg] )
1150dSRF_mas_snow     = Sprec ( [SRF_mas_snow_end   , -SRF_mas_snow_beg] )
1151dSRF_mas_lake     = Sprec ( [SRF_mas_lake_end   , -SRF_mas_lake_beg] )
1152
1153echo ( '------------------------------------------------------------------------------------' )
1154echo ( f'\nSurface reservoirs  -- {Title} ')
1155echo ( f'SRF_mas_watveg_beg   = {SRF_mas_watveg_beg :12.6e} kg | SRF_mas_watveg_end   = {SRF_mas_watveg_end :12.6e} kg ' )
1156echo ( f'SRF_mas_watsoil_beg  = {SRF_mas_watsoil_beg:12.6e} kg | SRF_mas_watsoil_end  = {SRF_mas_watsoil_end:12.6e} kg ' )
1157echo ( f'SRF_mas_snow_beg     = {SRF_mas_snow_beg   :12.6e} kg | SRF_mas_snow_end     = {SRF_mas_snow_end   :12.6e} kg ' )
1158echo ( f'SRF_mas_lake_beg     = {SRF_mas_lake_beg   :12.6e} kg | SRF_mas_lake_end     = {SRF_mas_lake_end   :12.6e} kg ' )
1159
1160prtFlux ( 'dMass (watveg) ', dSRF_mas_watveg , 'e' , True )
1161prtFlux ( 'dMass (watsoil)', dSRF_mas_watsoil, 'e' , True )
1162prtFlux ( 'dMass (snow)   ', dSRF_mas_snow   , 'e' , True )
1163prtFlux ( 'dMass (lake)   ', dSRF_mas_lake   , 'e' , True )
1164
1165SRF_mas_wat_beg = Sprec ( [SRF_mas_watveg_beg , SRF_mas_watsoil_beg, SRF_mas_snow_beg] )
1166SRF_mas_wat_end = Sprec ( [SRF_mas_watveg_end , SRF_mas_watsoil_end, SRF_mas_snow_end] )
1167
1168dSRF_mas_wat    = Sprec ( [+SRF_mas_watveg_end , +SRF_mas_watsoil_end, +SRF_mas_snow_end, 
1169                           -SRF_mas_watveg_beg , -SRF_mas_watsoil_beg, -SRF_mas_snow_beg]  )
1170
1171echo ( '------------------------------------------------------------------------------------' )
1172echo ( f'Water content in surface  -- {Title} ' )
1173echo ( f'SRF_mas_wat_beg   = {SRF_mas_wat_beg:12.6e} kg | SRF_mas_wat_end  = {SRF_mas_wat_end:12.6e} kg ')
1174prtFlux ( 'dMass (water srf)', dSRF_mas_wat, 'e', True )
1175
1176echo ( '------------------------------------------------------------------------------------' )
1177echo ( 'Water content in  ATM + SRF + RUN + LAKE' )
1178echo ( 'mas_wat_beg = {:12.6e} kg | mas_wat_end = {:12.6e} kg '.
1179           format (DYN_mas_wat_beg + ATM_mas_sno_beg + RUN_mas_wat_beg + SRF_mas_wat_beg + SRF_mas_lake_beg ,
1180                   DYN_mas_wat_end + ATM_mas_sno_end + RUN_mas_wat_end + SRF_mas_wat_end + SRF_mas_lake_end ) )
1181prtFlux ( 'dMass (water atm+srf+run+lake)', dDYN_mas_wat + dATM_mas_sno + dRUN_mas_wat + dSRF_mas_wat + dSRF_mas_lake, 'e', True)
1182
1183echo ( '\n====================================================================================' )
1184echo ( f'-- ATM Fluxes  -- {Title} ' )
1185
1186if ATM_HIS == 'latlon' :
1187    echo ( ' latlon case' )
1188    ATM_wbilo_oce   = lmdz.geo2point ( rprec (d_ATM_his ['wbilo_oce']), dim1D='cell' )
1189    ATM_wbilo_sic   = lmdz.geo2point ( rprec (d_ATM_his ['wbilo_sic']), dim1D='cell' )
1190    ATM_wbilo_ter   = lmdz.geo2point ( rprec (d_ATM_his ['wbilo_ter']), dim1D='cell' )
1191    ATM_wbilo_lic   = lmdz.geo2point ( rprec (d_ATM_his ['wbilo_lic']), dim1D='cell' )
1192    ATM_runofflic   = lmdz.geo2point ( rprec (d_ATM_his ['runofflic']), dim1D='cell' )
1193    ATM_fqcalving   = lmdz.geo2point ( rprec (d_ATM_his ['fqcalving']), dim1D='cell' )
1194    ATM_fqfonte     = lmdz.geo2point ( rprec (d_ATM_his ['fqfonte']  ), dim1D='cell' )
1195    ATM_precip      = lmdz.geo2point ( rprec (d_ATM_his ['precip']   ), dim1D='cell' )
1196    ATM_snowf       = lmdz.geo2point ( rprec (d_ATM_his ['snow']     ), dim1D='cell' )
1197    ATM_evap        = lmdz.geo2point ( rprec (d_ATM_his ['evap']     ), dim1D='cell' )
1198    ATM_wevap_ter   = lmdz.geo2point ( rprec (d_ATM_his ['wevap_ter']), dim1D='cell' )
1199    ATM_wevap_oce   = lmdz.geo2point ( rprec (d_ATM_his ['wevap_oce']), dim1D='cell' )
1200    ATM_wevap_lic   = lmdz.geo2point ( rprec (d_ATM_his ['wevap_lic']), dim1D='cell' )
1201    ATM_wevap_sic   = lmdz.geo2point ( rprec (d_ATM_his ['wevap_sic']), dim1D='cell' )
1202    ATM_wrain_ter   = lmdz.geo2point ( rprec (d_ATM_his ['wrain_ter']), dim1D='cell' )
1203    ATM_wrain_oce   = lmdz.geo2point ( rprec (d_ATM_his ['wrain_oce']), dim1D='cell' )
1204    ATM_wrain_lic   = lmdz.geo2point ( rprec (d_ATM_his ['wrain_lic']), dim1D='cell' )
1205    ATM_wrain_sic   = lmdz.geo2point ( rprec (d_ATM_his ['wrain_sic']), dim1D='cell' )
1206    ATM_wsnow_ter   = lmdz.geo2point ( rprec (d_ATM_his ['wsnow_ter']), dim1D='cell' )
1207    ATM_wsnow_oce   = lmdz.geo2point ( rprec (d_ATM_his ['wsnow_oce']), dim1D='cell' )
1208    ATM_wsnow_lic   = lmdz.geo2point ( rprec (d_ATM_his ['wsnow_lic']), dim1D='cell' )
1209    ATM_wsnow_sic   = lmdz.geo2point ( rprec (d_ATM_his ['wsnow_sic']), dim1D='cell' )
1210    ATM_runofflic   = lmdz.geo2point ( rprec (d_ATM_his ['runofflic']), dim1D='cell' )
1211    echo ( f'End of LATLON case')
1212   
1213if ATM_HIS == 'ico' :
1214    echo (' ico case')
1215    ATM_wbilo_oce   = rprec (d_ATM_his ['wbilo_oce'])
1216    ATM_wbilo_sic   = rprec (d_ATM_his ['wbilo_sic'])
1217    ATM_wbilo_ter   = rprec (d_ATM_his ['wbilo_ter'])
1218    ATM_wbilo_lic   = rprec (d_ATM_his ['wbilo_lic'])
1219    ATM_runofflic   = rprec (d_ATM_his ['runofflic'])
1220    ATM_fqcalving   = rprec (d_ATM_his ['fqcalving'])
1221    ATM_fqfonte     = rprec (d_ATM_his ['fqfonte']  )
1222    ATM_precip      = rprec (d_ATM_his ['precip']   )
1223    ATM_snowf       = rprec (d_ATM_his ['snow']     )
1224    ATM_evap        = rprec (d_ATM_his ['evap']     )
1225    ATM_wevap_ter   = rprec (d_ATM_his ['wevap_ter'])
1226    ATM_wevap_oce   = rprec (d_ATM_his ['wevap_oce'])
1227    ATM_wevap_lic   = rprec (d_ATM_his ['wevap_lic'])
1228    ATM_wevap_sic   = rprec (d_ATM_his ['wevap_sic'])
1229    ATM_runofflic   = rprec (d_ATM_his ['runofflic'])
1230    ATM_wevap_ter   = rprec (d_ATM_his ['wevap_ter'])
1231    ATM_wevap_oce   = rprec (d_ATM_his ['wevap_oce'])
1232    ATM_wevap_lic   = rprec (d_ATM_his ['wevap_lic'])
1233    ATM_wevap_sic   = rprec (d_ATM_his ['wevap_sic'])
1234    ATM_wrain_ter   = rprec (d_ATM_his ['wrain_ter'])
1235    ATM_wrain_oce   = rprec (d_ATM_his ['wrain_oce'])
1236    ATM_wrain_lic   = rprec (d_ATM_his ['wrain_lic'])
1237    ATM_wrain_sic   = rprec (d_ATM_his ['wrain_sic'])
1238    ATM_wsnow_ter   = rprec (d_ATM_his ['wsnow_ter'])
1239    ATM_wsnow_oce   = rprec (d_ATM_his ['wsnow_oce'])
1240    ATM_wsnow_lic   = rprec (d_ATM_his ['wsnow_lic'])
1241    ATM_wsnow_sic   = rprec (d_ATM_his ['wsnow_sic'])
1242    echo ( f'End of ico case ')
1243
1244echo ( 'ATM wprecip_oce' )
1245ATM_wprecip_oce = ATM_wrain_oce + ATM_wsnow_oce
1246ATM_wprecip_ter = ATM_wrain_ter + ATM_wsnow_ter
1247ATM_wprecip_sic = ATM_wrain_sic + ATM_wsnow_sic
1248ATM_wprecip_lic = ATM_wrain_lic + ATM_wsnow_lic
1249
1250ATM_wbilo       = ATM_wbilo_oce   + ATM_wbilo_sic   + ATM_wbilo_ter   + ATM_wbilo_lic
1251ATM_wevap       = ATM_wevap_oce   + ATM_wevap_sic   + ATM_wevap_ter   + ATM_wevap_lic
1252ATM_wprecip     = ATM_wprecip_oce + ATM_wprecip_sic + ATM_wprecip_ter + ATM_wprecip_lic
1253ATM_wsnow       = ATM_wsnow_oce   + ATM_wsnow_sic   + ATM_wsnow_ter   + ATM_wsnow_lic
1254ATM_wrain       = ATM_wrain_oce   + ATM_wrain_sic   + ATM_wrain_ter   + ATM_wrain_lic
1255ATM_wemp        = ATM_wevap - ATM_wprecip
1256ATM_emp         = ATM_evap  - ATM_precip
1257
1258ATM_wprecip_sea = ATM_wprecip_oce + ATM_wprecip_sic
1259ATM_wsnow_sea   = ATM_wsnow_oce   + ATM_wsnow_sic
1260ATM_wrain_sea   = ATM_wrain_oce   + ATM_wrain_sic
1261ATM_wbilo_sea   = ATM_wbilo_oce   + ATM_wbilo_sic
1262ATM_wevap_sea   = ATM_wevap_sic   + ATM_wevap_oce
1263
1264ATM_wemp_ter    = ATM_wevap_ter - ATM_wprecip_ter
1265ATM_wemp_oce    = ATM_wevap_oce - ATM_wprecip_oce
1266ATM_wemp_sic    = ATM_wevap_sic - ATM_wprecip_sic
1267ATM_wemp_lic    = ATM_wevap_lic - ATM_wprecip_lic
1268ATM_wemp_sea    = ATM_wevap_sic - ATM_wprecip_oce
1269
1270if RUN_HIS == 'latlon' :
1271    echo ( f'RUN costalflow Grille LATLON' )
1272    if TestInterp :
1273         echo ( f'RUN runoff TestInterp' )
1274         RUN_runoff      = lmdz.geo2point ( rprec (d_RUN_his ['runoff_contfrac_interp']  )   , dim1D='cell' )
1275         RUN_drainage    = lmdz.geo2point ( rprec (d_RUN_his ['drainage_contfrac_interp'])   , dim1D='cell' )
1276    else : 
1277        echo ( f'RUN runoff' )
1278        RUN_runoff      = lmdz.geo2point ( rprec (d_RUN_his ['runoff']         ), dim1D='cell' )
1279        RUN_drainage    = lmdz.geo2point ( rprec (d_RUN_his ['drainage']       ), dim1D='cell' )
1280       
1281    RUN_coastalflow     = lmdz.geo2point ( rprec (d_RUN_his ['coastalflow']    ), dim1D='cell' ) 
1282    RUN_riverflow       = lmdz.geo2point ( rprec (d_RUN_his ['riverflow']      ), dim1D='cell' )
1283    RUN_riversret       = lmdz.geo2point ( rprec (d_RUN_his ['riversret']      ), dim1D='cell' )
1284    RUN_coastalflow_cpl = lmdz.geo2point ( rprec (d_RUN_his ['coastalflow_cpl']), dim1D='cell' ) 
1285    RUN_riverflow_cpl   = lmdz.geo2point ( rprec (d_RUN_his ['riverflow_cpl']  ), dim1D='cell' )
1286
1287if RUN_HIS == 'ico' :
1288    echo ( f'RUN costalflow Grille ICO' )
1289    RUN_coastalflow =  rprec (d_RUN_his ['coastalflow'])
1290    RUN_riverflow   =  rprec (d_RUN_his ['riverflow']  )
1291    RUN_runoff      =  rprec (d_RUN_his ['runoff']     )
1292    RUN_drainage    =  rprec (d_RUN_his ['drainage']   )
1293    RUN_riversret   =  rprec (d_RUN_his ['riversret']  )
1294   
1295    RUN_coastalflow_cpl = rprec (d_RUN_his ['coastalflow_cpl'])
1296    RUN_riverflow_cpl   = rprec (d_RUN_his ['riverflow_cpl']  )
1297
1298Step = 0
1299
1300if SRF_HIS == 'latlon' :
1301    if TestInterp :
1302         echo ( f'SRF rain TestInterp' )
1303         SRF_rain     = lmdz.geo2point ( rprec (d_SRF_his ['rain_contfrac_interp'] ), dim1D='cell')
1304         SRF_evap     = lmdz.geo2point ( rprec (d_SRF_his ['evap_contfrac_interp'] ), dim1D='cell')
1305         SRF_snowf    = lmdz.geo2point ( rprec (d_SRF_his ['snow_contfrac_interp'] ), dim1D='cell')
1306         SRF_subli    = lmdz.geo2point ( rprec (d_SRF_his ['subli_contfrac_interp']), dim1D='cell')
1307         SRF_transpir = lmdz.geo2point ( rprec (d_SRF_his ['transpir_contfrac_interp']).sum(dim='veget'), dim1D='cell' )
1308         #SRF_rain.attrs.update     ( d_SRF_his ['rain_contfrac_interp'].attrs )
1309         #SRF_evap.attrs.update     ( d_SRF_his ['evap_contfrac_interp'].attrs )
1310         #SRF_snowf.attrs.update    ( d_SRF_his ['snow_contfrac_interp'].attrs )
1311         #SRF_subli.attrs.update    ( d_SRF_his ['subli_contfrac_interp'].attrs )
1312         #SRF_transpir.attrs.update ( d_SRF_his ['transpir_contfrac_interp'].attrs )
1313    else : 
1314        echo ( f'SRF rain' )
1315        SRF_rain     = lmdz.geo2point ( rprec (d_SRF_his ['rain'] ) , dim1D='cell')
1316        SRF_evap     = lmdz.geo2point ( rprec (d_SRF_his ['evap'] ) , dim1D='cell')
1317        SRF_snowf    = lmdz.geo2point ( rprec (d_SRF_his ['snowf']) , dim1D='cell')
1318        SRF_subli    = lmdz.geo2point ( rprec (d_SRF_his ['subli']) , dim1D='cell')
1319        SRF_transpir = lmdz.geo2point ( rprec (d_SRF_his ['transpir']).sum(dim='veget'), dim1D='cell' )
1320
1321if SRF_HIS == 'ico' :
1322    echo ( f'SRF rain')
1323    SRF_rain     = rprec (d_SRF_his ['rain'] )
1324    SRF_evap     = rprec (d_SRF_his ['evap'] )
1325    SRF_snowf    = rprec (d_SRF_his ['snowf'])
1326    SRF_subli    = rprec (d_SRF_his ['subli'])
1327    SRF_transpir = rprec (d_SRF_his ['transpir']).sum(dim='veget')
1328
1329echo ( f'SRF emp' )
1330SRF_transpir.attrs['units'] = d_SRF_his ['transpir'].attrs['units']
1331SRF_emp      = SRF_evap - SRF_rain - SRF_snowf ; SRF_emp.attrs['units'] = SRF_rain.attrs['units']
1332   
1333## Correcting units of SECHIBA variables
1334def mmd2SI ( Var ) :
1335    '''Change unit from mm/d or m^3/s to kg/s if needed'''
1336    if 'units' in VarT.attrs : 
1337        if VarT.attrs['units'] in ['m^3/s', 'm3/s', 'm3.s-1',] :
1338            VarT.values = VarT.values  * ATM_rho                 ;  VarT.attrs['units'] = 'kg/s'
1339        if VarT.attrs['units'] == 'mm/d' :
1340            VarT.values = VarT.values  * ATM_rho * (1e-3/86400.) ;  VarT.attrs['units'] = 'kg/s'
1341        if VarT.attrs['units'] in ['m^3', 'm3', ] :
1342            VarT.values = VarT.values  * ATM_rho                 ;  VarT.attrs['units'] = 'kg'
1343           
1344for var in [ 'runoff', 'drainage', 'riversret', 'coastalflow', 'riverflow', 'coastalflow_cpl', 'riverflow_cpl' ] :
1345    VarT = locals()['RUN_' + var]
1346    mmd2SI (VarT)
1347
1348for var in ['evap', 'snowf', 'subli', 'transpir', 'rain', 'emp' ] :
1349    VarT = locals()['SRF_' + var]
1350    mmd2SI (VarT)
1351
1352echo ( f'RUN input' )
1353RUN_input  = RUN_runoff      + RUN_drainage
1354RUN_output = RUN_coastalflow + RUN_riverflow
1355
1356echo ( f'ATM flw_wbilo' )
1357ATM_flx_wbilo       = ATM_flux_int ( ATM_wbilo      )
1358ATM_flx_wevap       = ATM_flux_int ( ATM_wevap      )
1359ATM_flx_wprecip     = ATM_flux_int ( ATM_wprecip    )
1360ATM_flx_wsnow       = ATM_flux_int ( ATM_wsnow      )
1361ATM_flx_wrain       = ATM_flux_int ( ATM_wrain      )
1362ATM_flx_wemp        = ATM_flux_int ( ATM_wemp       )
1363
1364ATM_flx_wbilo_lic   = ATM_flux_int ( ATM_wbilo_lic  )
1365ATM_flx_wbilo_oce   = ATM_flux_int ( ATM_wbilo_oce  )
1366ATM_flx_wbilo_sea   = ATM_flux_int ( ATM_wbilo_sea  )
1367ATM_flx_wbilo_sic   = ATM_flux_int ( ATM_wbilo_sic  )
1368ATM_flx_wbilo_ter   = ATM_flux_int ( ATM_wbilo_ter  )
1369ATM_flx_calving     = ATM_flux_int ( ATM_fqcalving  )
1370ATM_flx_fqfonte     = ATM_flux_int ( ATM_fqfonte    )
1371
1372LIC_flx_calving     = LIC_flux_int ( ATM_fqcalving  )
1373LIC_flx_fqfonte     = LIC_flux_int ( ATM_fqfonte    )
1374
1375echo ( f'ATM flx precip' )
1376ATM_flx_precip      = ATM_flux_int ( ATM_precip     )
1377ATM_flx_snowf       = ATM_flux_int ( ATM_snowf      )
1378ATM_flx_evap        = ATM_flux_int ( ATM_evap       )
1379ATM_flx_runlic      = ATM_flux_int ( ATM_runofflic  )
1380
1381LIC_flx_precip      = LIC_flux_int ( ATM_precip     )
1382LIC_flx_snowf       = LIC_flux_int ( ATM_snowf      )
1383LIC_flx_evap        = LIC_flux_int ( ATM_evap       )
1384LIC_flx_runlic      = LIC_flux_int ( ATM_runofflic  )
1385
1386echo ( f'ATM flx_wrain_ter' )
1387ATM_flx_wrain_ter    = ATM_flux_int ( ATM_wrain_ter )
1388ATM_flx_wrain_oce    = ATM_flux_int ( ATM_wrain_oce )
1389ATM_flx_wrain_lic    = ATM_flux_int ( ATM_wrain_lic )
1390ATM_flx_wrain_sic    = ATM_flux_int ( ATM_wrain_sic )
1391ATM_flx_wrain_sea    = ATM_flux_int ( ATM_wrain_sea )
1392
1393ATM_flx_wsnow_ter    = ATM_flux_int ( ATM_wsnow_ter )
1394ATM_flx_wsnow_oce    = ATM_flux_int ( ATM_wsnow_oce )
1395ATM_flx_wsnow_lic    = ATM_flux_int ( ATM_wsnow_lic )
1396ATM_flx_wsnow_sic    = ATM_flux_int ( ATM_wsnow_sic )
1397ATM_flx_wsnow_sea    = ATM_flux_int ( ATM_wsnow_sea )
1398
1399echo ( f'ATM flx_evap_ter' ) 
1400ATM_flx_wevap_ter    = ATM_flux_int ( ATM_wevap_ter )
1401ATM_flx_wevap_oce    = ATM_flux_int ( ATM_wevap_oce )
1402ATM_flx_wevap_lic    = ATM_flux_int ( ATM_wevap_lic )
1403ATM_flx_wevap_sic    = ATM_flux_int ( ATM_wevap_sic )
1404ATM_flx_wevap_sea    = ATM_flux_int ( ATM_wevap_sea )
1405ATM_flx_wprecip_lic  = ATM_flux_int ( ATM_wprecip_lic )
1406ATM_flx_wprecip_oce  = ATM_flux_int ( ATM_wprecip_oce )
1407ATM_flx_wprecip_sic  = ATM_flux_int ( ATM_wprecip_sic )
1408ATM_flx_wprecip_ter  = ATM_flux_int ( ATM_wprecip_ter )
1409ATM_flx_wprecip_sea  = ATM_flux_int ( ATM_wprecip_sea )
1410ATM_flx_wemp_lic     = ATM_flux_int ( ATM_wemp_lic )
1411ATM_flx_wemp_oce     = ATM_flux_int ( ATM_wemp_oce )
1412ATM_flx_wemp_sic     = ATM_flux_int ( ATM_wemp_sic )
1413ATM_flx_wemp_ter     = ATM_flux_int ( ATM_wemp_ter )
1414ATM_flx_wemp_sea     = ATM_flux_int ( ATM_wemp_sea )
1415
1416ATM_flx_emp          = ATM_flux_int ( ATM_emp )
1417
1418echo ( f'RUN flx_coastal' )
1419RUN_flx_coastal     = ONE_flux_int ( RUN_coastalflow)
1420echo ( f'RUN flx_river' )
1421RUN_flx_river       = ONE_flux_int ( RUN_riverflow  )
1422echo ( f'RUN flx_coastal_cpl' )
1423RUN_flx_coastal_cpl = ONE_flux_int ( RUN_coastalflow_cpl)
1424echo ( f'RUN flx_river_cpl' )
1425RUN_flx_river_cpl   = ONE_flux_int ( RUN_riverflow_cpl  )
1426echo ( f'RUN flx_drainage' )
1427RUN_flx_drainage    = SRF_flux_int ( RUN_drainage   )
1428echo ( f'RUN flx_riversset' )
1429RUN_flx_riversret   = SRF_flux_int ( RUN_riversret  )
1430echo ( f'RUN flx_runoff' )
1431RUN_flx_runoff      = SRF_flux_int ( RUN_runoff     )
1432echo ( f'RUN flx_input' )
1433RUN_flx_input       = SRF_flux_int ( RUN_input      )
1434echo ( f'RUN flx_output' )
1435RUN_flx_output      = ONE_flux_int ( RUN_output     )
1436
1437echo ( f'RUN flx_bil' ) ; Step += 1
1438#RUN_flx_bil    = RUN_flx_input   - RUN_flx_output
1439#RUN_flx_rivcoa = RUN_flx_coastal + RUN_flx_river
1440
1441RUN_flx_bil    = ONE_flux_int ( RUN_input       - RUN_output)
1442RUN_flx_rivcoa = ONE_flux_int ( RUN_coastalflow + RUN_riverflow)
1443
1444prtFlux ('wbilo_oce            ', ATM_flx_wbilo_oce     , 'f' )         
1445prtFlux ('wbilo_sic            ', ATM_flx_wbilo_sic     , 'f' )         
1446prtFlux ('wbilo_sic+oce        ', ATM_flx_wbilo_sea     , 'f' )         
1447prtFlux ('wbilo_ter            ', ATM_flx_wbilo_ter     , 'f' )         
1448prtFlux ('wbilo_lic            ', ATM_flx_wbilo_lic     , 'f' )         
1449prtFlux ('Sum wbilo_*          ', ATM_flx_wbilo         , 'f', True) 
1450prtFlux ('E-P                  ', ATM_flx_emp           , 'f', True) 
1451prtFlux ('calving              ', ATM_flx_calving       , 'f' ) 
1452prtFlux ('fqfonte              ', ATM_flx_fqfonte       , 'f' )       
1453prtFlux ('precip               ', ATM_flx_precip        , 'f' )       
1454prtFlux ('snowf                ', ATM_flx_snowf         , 'f' )       
1455prtFlux ('evap                 ', ATM_flx_evap          , 'f' )
1456prtFlux ('runoff lic           ', ATM_flx_runlic        , 'f' )
1457
1458prtFlux ('ATM_flx_wevap*       ', ATM_flx_wevap         , 'f' )
1459prtFlux ('ATM_flx_wrain*       ', ATM_flx_wrain         , 'f' )
1460prtFlux ('ATM_flx_wsnow*       ', ATM_flx_wsnow         , 'f' )
1461prtFlux ('ATM_flx_wprecip*     ', ATM_flx_wprecip       , 'f' )
1462prtFlux ('ATM_flx_wemp*        ', ATM_flx_wemp          , 'f', True )
1463
1464prtFlux ('ERROR evap           ', ATM_flx_wevap   - ATM_flx_evap  , 'e', True )
1465prtFlux ('ERROR precip         ', ATM_flx_wprecip - ATM_flx_precip, 'e', True )
1466prtFlux ('ERROR snow           ', ATM_flx_wsnow   - ATM_flx_snowf , 'e', True )
1467prtFlux ('ERROR emp            ', ATM_flx_wemp    - ATM_flx_emp   , 'e', True )
1468
1469
1470echo ( '\n====================================================================================' )
1471echo ( f'-- RUNOFF Fluxes  -- {Title} ' )
1472prtFlux ('coastalflow   ', RUN_flx_coastal    , 'f' ) 
1473prtFlux ('riverflow     ', RUN_flx_river      , 'f' )       
1474prtFlux ('coastal_cpl   ', RUN_flx_coastal_cpl, 'f' ) 
1475prtFlux ('riverf_cpl    ', RUN_flx_river_cpl  , 'f' )   
1476prtFlux ('river+coastal ', RUN_flx_rivcoa     , 'f' )   
1477prtFlux ('drainage      ', RUN_flx_drainage   , 'f' )   
1478prtFlux ('riversret     ', RUN_flx_riversret  , 'f' )   
1479prtFlux ('runoff        ', RUN_flx_runoff     , 'f' )   
1480prtFlux ('river in      ', RUN_flx_input      , 'f' )   
1481prtFlux ('river out     ', RUN_flx_output     , 'f' )   
1482prtFlux ('river bil     ', RUN_flx_bil        , 'f' )   
1483
1484ATM_flx_budget = -ATM_flx_wbilo + ATM_flx_calving + ATM_flx_runlic #+ ATM_flx_fqfonte + RUN_flx_river
1485
1486
1487echo ('')
1488#echo ('  Global        {:12.3e} kg | {:12.4f} Sv | {:12.4f} m '.format ( ATM_flx_budget , ATM_flx_budget / dtime_sec*1E-9, ATM_flx_budget /ATM_aire_sea_tot/ATM_rho ))
1489
1490#echo ('  E-P-R         {:12.3e} kg | {:12.4e} Sv | {:12.4f} m '.format ( ATM_flx_emp      , ATM_flx_emp      / dtime_sec*1E-6/ATM_rho, ATM_flx_emp      /ATM_aire_sea_tot/ATM_rho ))
1491
1492ATM_flx_toSRF = -ATM_flx_wbilo_ter
1493
1494echo (' ')
1495echo ( '\n====================================================================================' )
1496echo ( f'--  Atmosphere  -- {Title} ' )
1497echo ( f'Mass begin = {DYN_mas_wat_beg:12.6e} kg | Mass end = {DYN_mas_wat_end:12.6e} kg' )
1498prtFlux ( 'dmass (atm)  = ', dDYN_mas_wat , 'e', True )
1499prtFlux ( 'Sum wbilo_*  = ', ATM_flx_wbilo, 'e', True )
1500prtFlux ( 'E-P          = ', ATM_flx_emp  , 'e', True )
1501echo ( ' ' )
1502prtFlux ( 'Water loss atm', ATM_flx_wbilo - dDYN_mas_wat, 'f', True )
1503echo ( 'Water loss atm = {:12.3e} (rel)  '.format ( (ATM_flx_wbilo - dDYN_mas_wat)/dDYN_mas_wat  ) )
1504
1505echo (' ')
1506prtFlux ( 'Water loss atm', ATM_flx_emp  - dDYN_mas_wat , 'f', True )
1507echo ( 'Water loss atm = {:12.3e} (rel)  '.format ( (ATM_flx_emp-dDYN_mas_wat)/dDYN_mas_wat  ) )
1508echo (' ')
1509
1510echo (' ')
1511echo ( '\n====================================================================================' )
1512
1513LIC_flx_budget1 = Sprec ( [-ATM_flx_wemp_lic  , -LIC_flx_calving , -LIC_flx_fqfonte] )
1514LIC_flx_budget2 = Sprec ( [-ATM_flx_wbilo_lic , -LIC_flx_calving , -LIC_flx_fqfonte] )
1515LIC_flx_budget3 = Sprec ( [-ATM_flx_wbilo_lic , -LIC_flx_runlic] )
1516LIC_flx_budget4 = Sprec ( [-ATM_flx_wemp_lic  , -LIC_flx_runlic] )
1517
1518echo ( f'--  LIC  -- {Title} ' )
1519echo ( f'Mass total   begin = {LIC_mas_wat_beg    :12.6e} kg | Mass end = {LIC_mas_wat_end    :12.6e} kg' )
1520echo ( f'Mass snow    begin = {LIC_mas_sno_beg    :12.6e} kg | Mass end = {LIC_mas_sno_end    :12.6e} kg' )
1521echo ( f'Mass qs      begin = {LIC_mas_qs_beg     :12.6e} kg | Mass end = {LIC_mas_qs_end     :12.6e} kg' )
1522echo ( f'Mass runlic0 begin = {LIC_mas_runlic0_beg:12.6e} kg | Mass end = {LIC_mas_runlic0_end:12.6e} kg' )
1523prtFlux ( 'dmass (LIC sno)       ', dLIC_mas_sno          , 'f', True, width=45 )
1524prtFlux ( 'dmass (LIC qs)        ', dLIC_mas_qs           , 'e', True, width=45 )
1525prtFlux ( 'dmass (LIC wat)       ', dLIC_mas_wat          , 'f', True, width=45 )
1526prtFlux ( 'dmass (LIC runlic0)   ', dLIC_mas_runlic0      , 'e', True, width=45 )
1527prtFlux ( 'dmass (LIC total)     ', dLIC_mas_wat          , 'e', True, width=45 )
1528prtFlux ( 'LIC ATM_flx_wemp_lic  ', ATM_flx_wemp_lic      , 'f', True, width=45 )
1529prtFlux ( 'LIC LIC_flx_fqfonte   ', LIC_flx_fqfonte       , 'f', True, width=45 )
1530prtFlux ( 'LIC LIC_flx_calving   ', LIC_flx_calving       , 'f', True, width=45 )
1531prtFlux ( 'LIC LIC_flx_runofflic ', LIC_flx_runlic        , 'f', True, width=45 )
1532prtFlux ( 'LIC fqfonte + calving ', LIC_flx_calving+LIC_flx_fqfonte , 'f', True, width=45 )
1533prtFlux ( 'LIC fluxes 1 ( wemp_lic   - fqcalving - fqfonte)) ', LIC_flx_budget1              , 'f', True, width=45 )
1534prtFlux ( 'LIC fluxes 2 (-wbilo_lic - fqcalving - fqfonte)   ', LIC_flx_budget2              , 'f', True, width=45 )
1535prtFlux ( 'LIC fluxes 3 (-wbilo_lic - runofflic*frac_lic)    ', LIC_flx_budget3              , 'f', True, width=45 )
1536prtFlux ( 'LIC fluxes 3 ( wemp_lic  - runofflic*frac_lic)    ', LIC_flx_budget4              , 'f', True, width=45 )
1537prtFlux ( 'LIC error 1                                       ', LIC_flx_budget1-dLIC_mas_wat , 'e', True, width=45 )
1538prtFlux ( 'LIC error 2                                       ', LIC_flx_budget2-dLIC_mas_wat , 'e', True, width=45 )
1539prtFlux ( 'LIC error 3                                       ', LIC_flx_budget3-dLIC_mas_wat , 'e', True, width=45 )
1540echo ( 'LIC error (wevap - precip*frac_lic  - fqcalving - fqfonte)    = {:12.4e} (rel) '.format ( (LIC_flx_budget1-dLIC_mas_wat)/dLIC_mas_wat) )
1541echo ( 'LIC error (-wbilo_lic - fqcalving - fqfonte)                  = {:12.4e} (rel) '.format ( (LIC_flx_budget2-dLIC_mas_wat)/dLIC_mas_wat) )
1542echo ( 'LIC error (-wbilo_lic - runofflic*frac_lic)                   = {:12.4e} (rel) '.format ( (LIC_flx_budget3-dLIC_mas_wat)/dLIC_mas_wat) )
1543
1544echo ( '\n====================================================================================' )
1545echo ( f'-- SECHIBA fluxes  -- {Title} ' )
1546
1547SRF_flx_rain     = SRF_flux_int ( SRF_rain     )
1548SRF_flx_evap     = SRF_flux_int ( SRF_evap     )
1549SRF_flx_snowf    = SRF_flux_int ( SRF_snowf    )
1550SRF_flx_subli    = SRF_flux_int ( SRF_subli    )
1551SRF_flx_transpir = SRF_flux_int ( SRF_transpir )
1552SRF_flx_emp      = SRF_flux_int ( SRF_emp      )
1553
1554RUN_flx_torouting   = SRF_flux_int  ( RUN_runoff       + RUN_drainage)
1555RUN_flx_fromrouting = ONE_flux_int  ( RUN_coastalflow + RUN_riverflow )
1556
1557SRF_flx_all =  SRF_flux_int  ( SRF_rain + SRF_snowf - SRF_evap - RUN_runoff - RUN_drainage )
1558
1559prtFlux ('rain         ', SRF_flx_rain       , 'f' )
1560prtFlux ('evap         ', SRF_flx_evap       , 'f' )
1561prtFlux ('snowf        ', SRF_flx_snowf      , 'f' )
1562prtFlux ('E-P          ', SRF_flx_emp        , 'f' )
1563prtFlux ('subli        ', SRF_flx_subli      , 'f' )
1564prtFlux ('transpir     ', SRF_flx_transpir   , 'f' )
1565prtFlux ('to routing   ', RUN_flx_torouting  , 'f' )
1566prtFlux ('budget       ', SRF_flx_all        , 'f', small=True )
1567
1568echo ( '\n------------------------------------------------------------------------------------' )
1569echo ( 'Water content in surface ' )
1570echo ( f'SRF_mas_wat_beg  = {SRF_mas_wat_beg:12.6e} kg | SRF_mas_wat_end  = {SRF_mas_wat_end:12.6e} kg ' )
1571prtFlux ( 'dMass (water srf)', dSRF_mas_wat, 'e', small=True)
1572prtFlux ( 'Error            ',  SRF_flx_all-dSRF_mas_wat, 'e', small=True )
1573echo ( 'dMass (water srf) = {:12.4e} (rel)   '.format ( (SRF_flx_all-dSRF_mas_wat)/dSRF_mas_wat) )
1574
1575echo ( '\n====================================================================================' )
1576echo ( f'-- Check ATM vs. SRF -- {Title} ' )
1577prtFlux ('E-P ATM       ', ATM_flx_wemp_ter   , 'f' )
1578prtFlux ('wbilo ter     ', ATM_flx_wbilo_ter  , 'f' )
1579prtFlux ('E-P SRF       ', SRF_flx_emp        , 'f' )
1580prtFlux ('SRF/ATM error ', ATM_flx_wbilo_ter - SRF_flx_emp, 'e', True)
1581echo ( 'SRF/ATM error {:12.3e} (rel)  '.format ( (ATM_flx_wbilo_ter - SRF_flx_emp)/SRF_flx_emp ) )
1582
1583echo ('')
1584echo ( '\n====================================================================================' )
1585echo ( f'-- RUNOFF fluxes  -- {Title} ' )
1586RUN_flx_all = RUN_flx_torouting - RUN_flx_river - RUN_flx_coastal
1587prtFlux ('runoff    ', RUN_flx_runoff      , 'f' ) 
1588prtFlux ('drainage  ', RUN_flx_drainage    , 'f' ) 
1589prtFlux ('run+drain ', RUN_flx_torouting   , 'f' ) 
1590prtFlux ('river     ', RUN_flx_river       , 'f' ) 
1591prtFlux ('coastal   ', RUN_flx_coastal     , 'f' ) 
1592prtFlux ('riv+coa   ', RUN_flx_fromrouting , 'f' ) 
1593prtFlux ('budget    ', RUN_flx_all         , 'f' , small=True)
1594
1595echo ( '\n------------------------------------------------------------------------------------' )
1596echo ( f'Water content in routing+lake  -- {Title} ' )
1597echo ( f'RUN_mas_wat_beg  = {RUN_mas_wat_beg:12.6e} kg | RUN_mas_wat_end = {RUN_mas_wat_end:12.6e} kg ' )
1598prtFlux ( 'dMass (routing)  ', dRUN_mas_wat+dSRF_mas_lake, 'f', small=True)
1599prtFlux ( 'Routing error    ', RUN_flx_all+dSRF_mas_lake-dRUN_mas_wat, 'e', small=True )
1600echo ( 'Routing error : {:12.3e} (rel)'.format ( (RUN_flx_all-dSRF_mas_lake-dRUN_mas_wat)/(dRUN_mas_wat+dSRF_mas_lake) ) )
1601
1602echo ( '\n------------------------------------------------------------------------------------' )
1603echo ( f'Water content in routing  -- {Title} ' )
1604echo ( f'RUN_mas_wat_beg  = {RUN_mas_wat_beg:12.6e} kg | RUN_mas_wat_end = {RUN_mas_wat_end:12.6e} kg ' )
1605prtFlux ( 'dMass (routing) ', dRUN_mas_wat, 'f', small=True  )
1606prtFlux ( 'Routing error   ', RUN_flx_all-dRUN_mas_wat, 'e', small=True)
1607echo ( 'Routing error : {:12.3e} (rel)'.format ( (RUN_flx_all-dRUN_mas_wat)/dRUN_mas_wat ) )
1608
1609echo ( ' ' )
1610echo ( f'{Title = }' )
1611
1612echo ( 'SVN Information' )
1613for clef in SVN.keys () : echo ( SVN[clef] )
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