Index: CONFIG/LMDZOR/branches/LMDZOR_v4/CREATE/SCRIPT/era2gcm.ksh
===================================================================
--- CONFIG/LMDZOR/branches/LMDZOR_v4/CREATE/SCRIPT/era2gcm.ksh	(revision 1366)
+++ CONFIG/LMDZOR/branches/LMDZOR_v4/CREATE/SCRIPT/era2gcm.ksh	(revision 1367)
@@ -31,11 +31,11 @@
 	varout=uwnd
 	grille='grille_u'
-    elif [ ${varin} = 'v' ] ; then 
+    elif [ ${varin} = 'v' ] || [ ${varin} = 'vitv' ] ; then 
 	varout=vwnd
 	grille='grille_v'
-    elif [ ${varin} = 'ta' ] ; then 
+    elif [ ${varin} = 'ta' ] || [ ${varin} = 'temp' ] ; then 
 	varout=air
 	grille='grille_t'
-    elif [ ${varin} = 'r' ] ; then 
+    elif [ ${varin} = 'r' ] || [ ${varin} = 'hur' ] ; then 
 	varout=rh
 	grille='grille_t'
@@ -63,6 +63,5 @@
 
 save/clobber/file="${fileout}" ${varout}[d=2,g=${grille},l=1]
-!repeat/l=1:${tmax} save/file="${fileout}"/append ${varout}[d=2,g=${grille}]
-repeat/l=1:2 save/file="${fileout}"/append ${varout}[d=2,g=${grille}]
+repeat/l=1:${tmax} save/file="${fileout}"/append ${varout}[d=2,g=${grille}]
 
 exit
Index: CONFIG/LMDZOR/branches/LMDZOR_v4/CREATE/SCRIPT/interp_from_TS.ksh
===================================================================
--- CONFIG/LMDZOR/branches/LMDZOR_v4/CREATE/SCRIPT/interp_from_TS.ksh	(revision 1367)
+++ CONFIG/LMDZOR/branches/LMDZOR_v4/CREATE/SCRIPT/interp_from_TS.ksh	(revision 1367)
@@ -0,0 +1,170 @@
+#!/bin/ksh
+set -xv
+set verbose echo
+#
+# This script will interpolate horizontaly time series from IPSLCM5 model 
+# output to the desired model grid 
+#
+# Contact Josefine Ghattas
+###############################################################################
+###############################################################################
+###############################################################################
+# BEGIN USER DEFINITION
+###############################################################################
+
+# gridfile : file grilles_gcm.nc containing longitudes and latitudes of the destination grid
+gridfile=/work/cont003/p86ghatt/GUIDAGE/INTERP_FROM_TS/LMD96x95_grilles_gcm.nc
+
+
+# indir : path for directory containing the files to interpolate
+indir=/dmnfs/cont003/p86denv/IGCM_OUT/IPSLCM5A/PROD/rcp45/v3.rcp45.1/ATM/Analyse/TS_HF
+
+# varlist : list of variables to interpolate
+#varlist="vitu vitv temp hur"
+varlist="vitu"
+
+# filelist_var : list of files to interpolate for variable var
+filelist_vitu="v3.rcp45.1_20060101_20151231_HF_vitu.nc  v3.rcp45.1_20360101_20451231_HF_vitu.nc  v3.rcp45.1_20660101_20751231_HF_vitu.nc v3.rcp45.1_20160101_20251231_HF_vitu.nc  v3.rcp45.1_20460101_20551231_HF_vitu.nc  v3.rcp45.1_20760101_20851231_HF_vitu.nc v3.rcp45.1_20260101_20351231_HF_vitu.nc  v3.rcp45.1_20560101_20651231_HF_vitu.nc  v3.rcp45.1_20860101_20951231_HF_vitu.nc"
+
+filelist_vitv="v3.rcp45.1_20060101_20151231_HF_vitv.nc  v3.rcp45.1_20360101_20451231_HF_vitv.nc  v3.rcp45.1_20660101_20751231_HF_vitv.nc v3.rcp45.1_20160101_20251231_HF_vitv.nc  v3.rcp45.1_20460101_20551231_HF_vitv.nc  v3.rcp45.1_20760101_20851231_HF_vitv.nc v3.rcp45.1_20260101_20351231_HF_vitv.nc  v3.rcp45.1_20560101_20651231_HF_vitv.nc  v3.rcp45.1_20860101_20951231_HF_vitv.nc"
+
+filelist_temp="v3.rcp45.1_20060101_20151231_HF_temp.nc  v3.rcp45.1_20360101_20451231_HF_temp.nc  v3.rcp45.1_20660101_20751231_HF_temp.nc v3.rcp45.1_20160101_20251231_HF_temp.nc  v3.rcp45.1_20460101_20551231_HF_temp.nc  v3.rcp45.1_20760101_20851231_HF_temp.nc v3.rcp45.1_20260101_20351231_HF_temp.nc  v3.rcp45.1_20560101_20651231_HF_temp.nc  v3.rcp45.1_20860101_20951231_HF_temp.nc"
+
+filelist_hur="v3.rcp45.1_20060101_20151231_HF_hur.nc  v3.rcp45.1_20360101_20451231_HF_hur.nc  v3.rcp45.1_20660101_20751231_HF_hur.nc v3.rcp45.1_20160101_20251231_HF_hur.nc  v3.rcp45.1_20460101_20551231_HF_hur.nc  v3.rcp45.1_20760101_20851231_HF_hur.nc v3.rcp45.1_20260101_20351231_HF_hur.nc  v3.rcp45.1_20560101_20651231_HF_hur.nc  v3.rcp45.1_20860101_20951231_HF_hur.nc"
+
+# Define variables for output
+# Complet file name for output : $outdir/$year/$outprefix_$var_$year_$month.nc
+# outdir : directory to store output files
+outdir=$DMFDIR/IGCM_OUT/LMDZOR/NUDGEFILES/LMD9695/RCP45
+
+# outprefix : prefix to output files
+outprefix=v3.rcp45.1_HF_
+# outsuffix : suffix to output files
+outsuffix=.nc
+
+# Time variables
+# first_year : first year to interpolate
+first_year=2006
+# last_year : last year to interpolate
+last_year=2095
+
+# rundir : temporary run directory
+rundir=$CSCRATCHDIR/RUNDIR/interprun
+###############################################################################
+# END USER DEFINITION
+###############################################################################
+###############################################################################
+###############################################################################
+# Create and move to run directory
+if [ ! -d ${rundir} ] ; then
+    mkdir -p ${rundir}
+fi
+cp -f era2gcm.ksh $rundir/.
+cd $rundir
+
+# Create output directory if it does not exist
+if [ ! -d $outdir ] ; then
+    mkdir -p $outdir
+fi
+
+
+###############################################################################
+# Loop over variable list
+#   * Loop over corresponding file list
+#     1 - Interpolate the whole time-serie to destination grid
+#     2 - Devide files into monthly files
+#   * Loop over all years for each variable
+#     3 - Add a time step last in each file coming from next month 
+###############################################################################
+for var in $varlist ; do
+    case $var in
+	vitu)
+	    filelist=$filelist_vitu ;;
+	vitv)
+	    filelist=$filelist_vitv ;;
+        temp)
+            filelist=$fileslist_temp ;;
+        hur)
+            filelist=$filelist_hur ;;
+    esac
+    
+    echo $var : $filelist; echo
+ 
+    for file in $filelist ; do
+# 1 - Interpolate time serie to destiation grid
+	filein=$indir/$file
+	file2=$outdir/$file
+	cp -f $filein file1.nc
+	echo Interpolate file $filein and save in file $file2
+	./era2gcm.ksh $gridfile file1.nc file2.nc $var
+	
+# 2 - Devide files into monthly files
+	cdo splityear file2.nc outyear_
+    done
+    ls -lrt
+
+    year=$first_year
+    while [[ ${year} -le ${last_year} ]] ; do
+	# split in month
+	cdo splitmon outyear_$year.nc outmonth_
+
+	# move monthly files to output directory
+	mkdir -p $outdir/$year
+	month=01
+	for month in 01 02 03 04 05 06 07 08 09 10 11 12 ; do
+	    mv outmonth_$month.nc $outdir/$year/${outprefix}${var}_${year}_${month}${outsuffix}
+	done
+	
+	# update year
+	year=`expr $year + 1`
+    done
+    
+# Loop over all years for one variables
+# 3 - Add first time step last in file
+    echo Before add step
+    ls -lrt $outdir
+    ls -lrt $outdir/*
+
+    year=$first_year
+    month=01
+    while [[ ${year} -le ${last_year} ]] ; do
+	case $month in
+	    12)
+		nextyear=`expr $year + 1`
+		nextmonth=01
+		;;
+	    *)
+		nextyear=$year
+		nextmonth=`expr $month + 1`
+		if [[ $nextmonth -le 9 ]] ; then
+		    nextmonth=0$nextmonth
+		fi
+		;;
+	esac
+	
+	file=$outdir/$year/${outprefix}${var}_${year}_${month}${outsuffix}
+	nextfile=$outdir/$year/${outprefix}${var}_${nextyear}_${nextmonth}${outsuffix}
+	if [ -f ${nextfile} ] ; then
+	    echo First time step from file ${nextfile} will be added last in file ${file}
+	    cp -f $file file.nc
+	    cp -f $nextfile next.nc
+	    ncks -O -d time,0,0 next.nc tmp.nc
+	    ncrcat -O file.nc tmp.nc tmptot.nc
+	    mv tmptot.nc $file
+	else
+	    echo Next file ${nextfile} does not exist. Nothing will be done for ${file}
+	fi
+	
+	# Update month and year
+	year=$nextyear
+	month=$nextmonth
+    
+    done
+	
+# End of loop variable list
+done
+
+### Copy gridfile in output dir
+cp -f $gridfile $outdir/grilles_gcm.nc
+	    
+exit
