Changeset 2770 for CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER

Timestamp:

03/08/16 13:04:48 (8 years ago)

Author:

jgipsl

Message:

Update to be coherent with LMDZOR_v6 :

• added vert.def and removed vertical dependencies from gcm.def and physiq.def
• added new physiq.def_NPv5.4. Note this is still under develeoppement.
• clean old parameters in orchidee not longer used/existing
• use file_def_orchidee.xml from ORCHIDEE source model directory

Location:

CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP

Files:

• lmdz.card (modified) (4 diffs)
• orchidee.card (modified) (4 diffs)
• stomate.card (modified) (2 diffs)

CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/lmdz.card

@@ -7 +7 @@
 # LMDZ_Physics=AP for standard/old physics(defalut), can be used with LMDZ4_AR5 or LMDZ5/trunk sources
 # LMDZ_Physics=NPv3.2 for new physics, to be used with LMDZ5/trunk revision 1554 or later
+# LMDZ_Physics=NPv5.4 for new physics to be used with LMDZ5/trunk revision 2449 or later
 LMDZ_Physics=AP
-#LMDZ_Physics=NPv3.1
-#LMDZ_Physics=NPv3.2
 
 # Use XIOS as output library
@@ -66 +65 @@
 [InitialStateFiles]
 # start and startphy are the clim files computed with CLIM_CREATE (create_etat0_limit) job
-List=   (${R_IN}/CHM/INCA${RESOL_CHM}/start.nc  , start.nc      ) \
-        (${R_IN}/CHM/INCA${RESOL_CHM}/startphy.nc       , startphy.nc   )
-# start and starphy for nitrate version 
-#List=  (${R_IN}/CHM/INCA${RESOL_CHM}/start_nitrate.nc  , start.nc      ) \
-#       (${R_IN}/CHM/INCA${RESOL_CHM}/startphy_nitrate.nc       , startphy.nc   )
+List=   (${R_IN}/CHM/INCA${RESOL_CHM}/start_nitrate.nc  , start.nc      ) \
+        (${R_IN}/CHM/INCA${RESOL_CHM}/startphy_nitrate.nc       , startphy.nc   )
 
 
@@ -82 +78 @@
 
 [ParametersFiles]
-List=   (${SUBMIT_DIR}/PARAM/physiq.def_L${RESOL_ATM_Z}_${LMDZ_Physics}, physiq.def), \
-        (${SUBMIT_DIR}/PARAM/gcm.def_${RESOL_ATM_3D},    gcm.def),          \
+List=   (${SUBMIT_DIR}/PARAM/physiq.def_${LMDZ_Physics}, physiq.def),       \
+        (${SUBMIT_DIR}/PARAM/gcm.def_${RESOL_ATM_XY},    gcm.def),          \
+        (${SUBMIT_DIR}/PARAM/vert.def_L${RESOL_ATM_Z},   vert.def),         \
         (${SUBMIT_DIR}/PARAM/cosp_input_nl.txt,                .),          \
         (${SUBMIT_DIR}/PARAM/cosp_output_nl.txt,               .),          \
@@ -110 +107 @@
 
 [OutputText]
-List=   (physiq.def, gcm.def, run.def, traceur.def, guide.def, config.def, used_run.def, iodef.xml, context_lmdz.xml, field_def_lmdz.xml, file_def_*lmdz.xml, debug.01, lmdz.prt)
+List=   (physiq.def, gcm.def, vert.def, run.def, traceur.def, guide.def, config.def, used_run.def, iodef.xml, context_lmdz.xml, field_def_lmdz.xml, file_def_*lmdz.xml, debug.01, lmdz.prt)
 
 [OutputFiles]

CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/orchidee.card

@@ -10 +10 @@
 
 VEGET_UPDATE=0Y
-LAND_COVER_CHANGE=n
 
 [InitialStateFiles]
@@ -22 +21 @@
 ListNonDel= ()
 
+# to decomment if we want to calcul bvoc - for this we need to activate CHEMISTRY_BVOC in orchidee.def_Choi
+#ListNonDel= (/ccc/store/cont003/dsm/p24palm/ORCHIDEE_FORCING/orchidee_fertilizer_1995.nc, .), \
+#            (/ccc/store/cont003/dsm/p24palm/ORCHIDEE_FORCING/orchidee_bbg_clim.nc, .), \
+#            (/ccc/store/cont003/dsm/p24palm/ORCHIDEE_FORCING/Nfert.nc, .), \
+#            (/ccc/store/cont003/dsm/p24palm/ORCHIDEE_FORCING/Nmanure.nc, .)
+
 [SmoothFiles]
 List= ()
@@ -27 +32 @@
 [ParametersFiles]
 List=   (${SUBMIT_DIR}/PARAM/orchidee.def_${DefSuffix}, orchidee.def)   ,\
-        (${SUBMIT_DIR}/PARAM/file_def_orchidee.xml, .)                  ,\
+        (${MODIPSL}/modeles/ORCHIDEE/src_xml/file_def_orchidee.xml, .)  ,\
         (${MODIPSL}/modeles/ORCHIDEE/src_xml/context_orchidee.xml, .)   ,\
         (${MODIPSL}/modeles/ORCHIDEE/src_xml/field_def_orchidee.xml, .)
@@ -39 +44 @@
 [OutputFiles]
 List=   (sechiba_history.nc,   ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \
-        (sechiba_out_2.nc,     ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc,   NONE),                    \
-        (orchidee_watchout.nc, ${R_OUT_SRF_O_M}/${PREFIX}_1M_watchout.nc,        NONE)
+        (sechiba_out_2.nc,     ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc,   NONE)
 
 [Post_1M_sechiba_history]

CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/stomate.card

@@ -29 +29 @@
 [Post_1M_stomate_history]
 Patches= ()
-GatherWithInternal= (lon, lat, PFT, time_counter, time_counter_bounds, Areas)
+GatherWithInternal= (lon, lat, time_counter, time_counter_bounds, Areas)
 TimeSeriesVars2D= (T2M_MONTH,CONTFRAC,RESOLUTION_X,RESOLUTION_Y,CONVFLUX,CFLUX_PROD10,CFLUX_PROD100,HARVEST_ABOVE)
 ChunckJob2D = NONE
@@ -38 +38 @@
 [Post_1M_stomate_ipcc_history]
 Patches= ()
-GatherWithInternal= (lon, lat, PFT, time_counter, time_counter_bounds, Areas, CONTFRAC)
+GatherWithInternal= (lon, lat, time_counter, time_counter_bounds, Areas, CONTFRAC)
 TimeSeriesVars2D=(cVeg, cLitter, cSoil, cProduct, lai, gpp, ra, npp, rh, fFire, fHarvest, fLuc, nbp, fVegLitter, fLitterSoil, cLeaf, cWood, cRoot, cMisc, cLitterAbove, cLitterBelow, cSoilFast, cSoilMedium, cSoilSlow, landCoverFrac, treeFracPrimDec, treeFracPrimEver, c3PftFrac, c4PftFrac, rGrowth, rMaint, nppLeaf, nppWood, nppRoot, nep)
 ChunckJob2D = NONE