Ignore:
Timestamp:
03/16/17 14:40:18 (7 years ago)
Author:
cetlod
Message:

NEMO_v6 : harmonize xml files

Location:
CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/PARAM
Files:
4 edited

Legend:

Unmodified
Added
Removed
  • CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/PARAM/file_def_nemo-lim2.xml

    r2870 r3175  
    2121      <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- real monthly files --> 
    2222 
    23         <file id="file13" name_suffix="_icemod" description="ice variables" enabled=".true." > 
     23        <file id="file19" name_suffix="_icemod" description="ice variables" enabled=".true." > 
    2424          <field field_ref="snowthic_cea"     name="snthic"     long_name="surface_snow_thickness"   /> 
    2525          <field field_ref="icethic_cea"      name="sithic"     long_name="sea_ice_thickness"        /> 
  • CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/PARAM/file_def_nemo-lim3.xml

    r2986 r3175  
    2323      <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- real monthly files --> 
    2424 
    25         <file id="file14" name_suffix="_icemod" description="ice variables" enabled=".true." > 
    26           <field field_ref="snowthic_cea"     name="snthic"     long_name="surface_snow_thickness"   /> 
    27           <field field_ref="icethic_cea"      name="sithic"     long_name="sea_ice_thickness"        /> 
    28           <field field_ref="icevolu"          name="sivolu" /> 
    29           <field field_ref="snowvol"          name="snvolu" /> 
    30           <field field_ref="iceconc"          name="siconc"  /> 
    31  
    32           <field field_ref="vfxice"          name="vfxice" /> 
    33           <field field_ref="vfxsnw"          name="vfxsnw" /> 
    34           <field field_ref="vfxsub"          name="vfxsub" /> 
    35           <field field_ref="vfxsub_err"      name="vfxsub_err" /> 
    36           <field field_ref="vfxspr"          name="vfxspr" /> 
    37  
    38           <field field_ref="icetrp"          name="sivtrp" /> 
    39           <field field_ref="snwtrp"          name="snvtrp" /> 
    40           <field field_ref="saltrp"          name="saltrp" /> 
    41           <field field_ref="deitrp"          name="deitrp" /> 
    42           <field field_ref="destrp"          name="destrp" /> 
    43  
    44           <field field_ref="sfx"              name="sfx" /> 
    45  
    46           <field field_ref="hfxout"          name="hfxout"    /> 
    47           <field field_ref="hfxin"           name="hfxin"    /> 
    48  
    49           <!-- diags --> 
    50           <field field_ref="isst"             name="sst" /> 
    51           <field field_ref="isss"             name="sss" /> 
    52           <field field_ref="micesalt"         name="sisali" /> 
    53           <field field_ref="micet"            name="sitemp" /> 
    54           <field field_ref="icest"            name="sistem" /> 
    55           <field field_ref="icehc"            name="siheco" /> 
    56           <field field_ref="isnowhc"          name="snheco" /> 
    57           <field field_ref="miceage"          name="siages" /> 
    58  
    59           <field field_ref="uice_ipa"         name="sivelu" /> 
    60           <field field_ref="vice_ipa"         name="sivelv" /> 
    61           <field field_ref="icevel"           name="sivelo" /> 
    62           <field field_ref="idive"            name="sidive" /> 
    63           <field field_ref="ishear"           name="sishea" /> 
    64           <field field_ref="icestr"           name="sistre" /> 
    65  
    66           <field field_ref="ibrinv"           name="sibrin" /> 
    67           <field field_ref="icecolf"          name="sicolf" /> 
    68  
    69          <field field_ref="iceage_cat"      name="siagecat" /> 
    70           <field field_ref="iceconc_cat"     name="siconcat" /> 
    71           <field field_ref="icethic_cat"     name="sithicat" /> 
    72           <field field_ref="snowthic_cat"    name="snthicat" /> 
    73           <field field_ref="salinity_cat"    name="salincat" /> 
    74           <field field_ref="brinevol_cat"    name="sibricat" /> 
    75           <field field_ref="icetemp_cat"     name="sitemcat" /> 
    76           <field field_ref="snwtemp_cat"     name="sntemcat" /> 
    77         </file> 
     25       <file id="file19" name_suffix="_icemod" description="ice variables" enabled=".true." > 
     26          
     27         <field field_ref="snowthic_cea"     name="snthic"     long_name="surface_snow_thickness"   /> 
     28         <field field_ref="icethic_cea"      name="sithic"     long_name="sea_ice_thickness"        /> 
     29         <field field_ref="icevolu"          name="sivolu"  /> 
     30         <field field_ref="snowvol"          name="snvolu"  /> 
     31         <field field_ref="iceconc"          name="siconc"  /> 
     32          
     33         <!-- thermo --> 
     34         <field field_ref="micesalt"         name="sisali" /> 
     35         <field field_ref="micet"            name="sitemp" /> 
     36         <field field_ref="icest"            name="sistem" /> 
     37         <field field_ref="icehc"            name="siheco" /> 
     38         <field field_ref="isnowhc"          name="snheco" /> 
     39         <field field_ref="miceage"          name="siages" /> 
     40          
     41         <!-- dyn --> 
     42         <field field_ref="uice_ipa"         name="sivelu" /> 
     43         <field field_ref="vice_ipa"         name="sivelv" /> 
     44         <field field_ref="icevel"           name="sivelo" /> 
     45         <field field_ref="idive"            name="sidive" /> 
     46         <field field_ref="ishear"           name="sishea" /> 
     47         <field field_ref="icestr"           name="sistre" /> 
     48          
     49         <!-- transports --> 
     50         <field field_ref="icetrp"          name="sivtrp" /> 
     51         <field field_ref="snwtrp"          name="snvtrp" /> 
     52         <field field_ref="saltrp"          name="saltrp" /> 
     53         <field field_ref="deitrp"          name="deitrp" /> 
     54         <field field_ref="destrp"          name="destrp" /> 
     55          
     56         <!-- volume flux --> 
     57         <field field_ref="vfxice"          name="vfxice" /> 
     58         <field field_ref="vfxsnw"          name="vfxsnw" /> 
     59         <field field_ref="vfxsub"          name="vfxsub" /> 
     60         <field field_ref="vfxsub_err"      name="vfxsub_err" /> 
     61         <field field_ref="vfxspr"          name="vfxspr" /> 
     62          
     63         <!-- ice-ocean salt flux --> 
     64         <field field_ref="sfx"              name="sfx" /> 
     65          
     66         <!-- heat fluxes --> 
     67         <field field_ref="hfxout"          name="hfxout"   /> 
     68         <field field_ref="hfxin"           name="hfxin"    /> 
     69          
     70         <!-- ice-atm. heat flux from mass exchange --> 
     71         <field field_ref="hfxsub"          name="hfxsub"   /> 
     72         <field field_ref="hfxspr"          name="hfxspr"   /> 
     73          
     74         <!-- outputs by category --> 
     75         <field field_ref="iceage_cat"       name="siagecat"/> 
     76         <field field_ref="iceconc_cat"      name="siconcat"/> 
     77         <field field_ref="icethic_cat"      name="sithicat"/> 
     78         <field field_ref="snowthic_cat"     name="snthicat"/> 
     79         <field field_ref="salinity_cat"     name="salincat"/> 
     80         <field field_ref="brinevol_cat"     name="sibricat"/> 
     81          
     82         <!-- ocean outputs --> 
     83         <field field_ref="isst"             name="sst"    /> 
     84         <field field_ref="isss"             name="sss"    /> 
    7885 
    7986      </file_group> 
  • CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/PARAM/file_def_nemo-opa.xml

    r2998 r3175  
    3636        </file> 
    3737        
     38        
    3839        <file id="file2" name_suffix="_scalar" description="scalar variables" enabled=".true." > 
    39            <field field_ref="voltot"       grid_ref="grid_1point" name="scvoltot"  /> 
    40            <field field_ref="sshtot"       grid_ref="grid_1point" name="scsshtot"  /> 
    41            <field field_ref="sshsteric"    grid_ref="grid_1point" name="scsshste"  /> 
    42            <field field_ref="sshthster"    grid_ref="grid_1point" name="scsshtst"  /> 
    43            <field field_ref="masstot"      grid_ref="grid_1point" name="scmastot"  /> 
    44            <field field_ref="temptot"      grid_ref="grid_1point" name="sctemtot"  /> 
    45            <field field_ref="saltot"       grid_ref="grid_1point" name="scsaltot"  /> 
    46  
    47           <field field_ref="bgtemper"     grid_ref="grid_1point" name="bgtemper"    /> 
    48           <field field_ref="bgsaline"     grid_ref="grid_1point" name="bgsaline"    /> 
    49           <field field_ref="bgheatco"     grid_ref="grid_1point" name="bgheatco"    /> 
    50           <field field_ref="bgheatfx"     grid_ref="grid_1point" name="bgheatfx"    /> 
    51           <field field_ref="bgsaltco"     grid_ref="grid_1point" name="bgsaltco"    /> 
    52           <field field_ref="bgvolssh"     grid_ref="grid_1point" name="bgvolssh"    />  
    53           <field field_ref="bgvole3t"     grid_ref="grid_1point" name="bgvole3t"    /> 
    54           <field field_ref="bgfrcvol"     grid_ref="grid_1point" name="bgfrcvol"    /> 
    55           <field field_ref="bgfrctem"     grid_ref="grid_1point" name="bgfrctem"    /> 
    56           <field field_ref="bgfrchfx"     grid_ref="grid_1point" name="bgfrchfx"    /> 
    57           <field field_ref="bgfrcsal"     grid_ref="grid_1point" name="bgfrcsal"    /> 
    58         </file> 
    59  
    60         <file id="file3" name_suffix="_SBC_scalar" description="scalar variables" enabled=".true." > 
    61           <field field_ref="ibgvol_tot"    grid_ref="grid_1point" name="ibgvol_tot"   /> 
    62           <field field_ref="sbgvol_tot"    grid_ref="grid_1point" name="sbgvol_tot"   /> 
    63           <field field_ref="ibgarea_tot"   grid_ref="grid_1point" name="ibgarea_tot"     /> 
    64           <field field_ref="ibgsalt_tot"   grid_ref="grid_1point" name="ibgsalt_tot"   /> 
    65           <field field_ref="ibgheat_tot"   grid_ref="grid_1point" name="ibgheat_tot"   /> 
    66           <field field_ref="sbgheat_tot"   grid_ref="grid_1point" name="sbgheat_tot"   /> 
    67  
    68           <field field_ref="ibgvolume"    grid_ref="grid_1point"  name="ibgvolume"   /> 
    69           <field field_ref="ibgsaltco"    grid_ref="grid_1point"  name="ibgsaltco"   /> 
    70           <field field_ref="ibgheatco"    grid_ref="grid_1point"  name="ibgheatco"   /> 
    71           <field field_ref="ibgheatfx"    grid_ref="grid_1point"  name="ibgheatfx"   /> 
    72  
    73            
    74           <field field_ref="ibgfrcvoltop" grid_ref="grid_1point"  name="ibgfrcvoltop" /> 
    75           <field field_ref="ibgfrcvolbot" grid_ref="grid_1point"  name="ibgfrcvolbot" /> 
    76           <field field_ref="ibgfrctemtop" grid_ref="grid_1point"  name="ibgfrctemtop" /> 
    77           <field field_ref="ibgfrctembot" grid_ref="grid_1point"  name="ibgfrctembot" /> 
    78           <field field_ref="ibgfrcsal"    grid_ref="grid_1point"  name="ibgfrcsal"    /> 
    79           <field field_ref="ibgfrchfxtop" grid_ref="grid_1point"  name="ibgfrchfxtop" /> 
    80           <field field_ref="ibgfrchfxbot" grid_ref="grid_1point"  name="ibgfrchfxbot" /> 
    81  
     40 
     41          <!-- Volume --> 
     42          <!-- global contents --> 
     43          <field field_ref="voltot"       grid_ref="grid_1point"   name="scvoltot"  /> 
     44          <field field_ref="sshtot"       grid_ref="grid_1point"   name="scsshtot"  /> 
     45          <field field_ref="sshsteric"    grid_ref="grid_1point"   name="scsshste"  /> 
     46          <field field_ref="sshthster"    grid_ref="grid_1point"   name="scsshtst"  /> 
     47          <field field_ref="masstot"      grid_ref="grid_1point"   name="scmastot"  /> 
     48          <field field_ref="temptot"      grid_ref="grid_1point"   name="sctemtot"  /> 
     49          <field field_ref="saltot"       grid_ref="grid_1point"   name="scsaltot"  /> 
     50           
     51          <!-- global drifts (conservation checks) --> 
     52          <field field_ref="bgtemper"     grid_ref="grid_1point"   name="bgtemper"    /> 
     53          <field field_ref="bgsaline"     grid_ref="grid_1point"   name="bgsaline"    /> 
     54          <field field_ref="bgheatco"     grid_ref="grid_1point"   name="bgheatco"    /> 
     55          <field field_ref="bgheatfx"     grid_ref="grid_1point"   name="bgheatfx"    /> 
     56          <field field_ref="bgsaltco"     grid_ref="grid_1point"   name="bgsaltco"    /> 
     57          <field field_ref="bgvolssh"     grid_ref="grid_1point"   name="bgvolssh"    /> 
     58          <field field_ref="bgvole3t"     grid_ref="grid_1point"   name="bgvole3t"    /> 
     59 
     60          <!-- global surface forcings  --> 
     61          <field field_ref="bgfrcvol"     grid_ref="grid_1point"   name="bgfrcvol"    /> 
     62          <field field_ref="bgfrctem"     grid_ref="grid_1point"   name="bgfrctem"    /> 
     63          <field field_ref="bgfrchfx"     grid_ref="grid_1point"   name="bgfrchfx"    /> 
     64          <field field_ref="bgfrcsal"     grid_ref="grid_1point"   name="bgfrcsal"    /> 
     65 
     66          <!-- Surface --> 
     67          <!-- global contents --> 
     68          <field field_ref="ibgvol_tot"     grid_ref="grid_1point"  name="ibgvol_tot"   /> 
     69          <field field_ref="sbgvol_tot"     grid_ref="grid_1point"  name="sbgvol_tot"   /> 
     70          <field field_ref="ibgarea_tot"    grid_ref="grid_1point"  name="ibgarea_tot"  /> 
     71          <field field_ref="ibgsalt_tot"    grid_ref="grid_1point"  name="ibgsalt_tot"  /> 
     72          <field field_ref="ibgheat_tot"    grid_ref="grid_1point"  name="ibgheat_tot"  /> 
     73          <field field_ref="sbgheat_tot"    grid_ref="grid_1point"  name="sbgheat_tot"  /> 
     74           
     75          <!-- global drifts (conservation checks) --> 
     76          <field field_ref="ibgvolume"      grid_ref="grid_1point"  name="ibgvolume"    /> 
     77          <field field_ref="ibgsaltco"      grid_ref="grid_1point"  name="ibgsaltco"    /> 
     78          <field field_ref="ibgheatco"      grid_ref="grid_1point"  name="ibgheatco"    /> 
     79          <field field_ref="ibgheatfx"      grid_ref="grid_1point"  name="ibgheatfx"    /> 
     80           
     81          <!-- global forcings  --> 
     82          <field field_ref="ibgfrcvoltop"   grid_ref="grid_1point"  name="ibgfrcvoltop" /> 
     83          <field field_ref="ibgfrcvolbot"   grid_ref="grid_1point"  name="ibgfrcvolbot" /> 
     84          <field field_ref="ibgfrctemtop"   grid_ref="grid_1point"  name="ibgfrctemtop" /> 
     85          <field field_ref="ibgfrctembot"   grid_ref="grid_1point"  name="ibgfrctembot" /> 
     86          <field field_ref="ibgfrcsal"      grid_ref="grid_1point"  name="ibgfrcsal"    /> 
     87          <field field_ref="ibgfrchfxtop"   grid_ref="grid_1point"  name="ibgfrchfxtop" /> 
     88          <field field_ref="ibgfrchfxbot"   grid_ref="grid_1point"  name="ibgfrchfxbot" /> 
     89           
    8290        </file> 
     91         
     92        <file id="file3" name_suffix="_SBC" description="surface fluxes variables" > <!-- time step automaticaly defined based on nn_fsbc --> 
     93          <field field_ref="qsr_oce"       name="qsr_oce"  long_name="downward shortwave flux at ocean surface"           /> 
     94          <field field_ref="qns_oce"       name="qns_oce"  long_name="downward non solar flux at ocean surface"           /> 
     95          <field field_ref="qsr_ice"       name="qsr_ice"  long_name="downward shortwave flux at ice surface"           /> 
     96          <field field_ref="qns_ice"       name="qns_ice"  long_name="downward non solar flux at ice surface"           /> 
     97          <field field_ref="qtr_ice"       name="qtr_ice"  long_name="shortwave flux transmitted thru the ice"           /> 
     98          <field field_ref="taum"          name="taum" /> 
     99          <field field_ref="wspd"          name="windsp"  /> 
     100          <field field_ref="precip"        name="precip" /> 
     101          <!-- For heat conservation checking --> 
     102          <field field_ref="qt_oce"        name="qt_oce"   long_name="downward total flux at ocean surface"           /> 
     103          <field field_ref="qemp_oce"      name="qemp_oce" long_name="Downward Heat Flux from E-P over open ocean"           /> 
     104          <field field_ref="qt_ice"        name="qt_ice"   long_name="downward total flux at ice surface"           /> 
     105          <field field_ref="qemp_ice"      name="qemp_ice" long_name="Downward Heat Flux from E-P over ice"           /> 
     106          <field field_ref="hflx_rain_cea" name="hflx_rain_cea"      /> 
     107          <field field_ref="hflx_evap_cea" name="hflx_evap_cea"      /> 
     108          <field field_ref="hflx_snow_cea" name="hflx_snow_cea"      /> 
     109          <field field_ref="hflx_cal_cea"  name="hflx_cal_cea"      /> 
     110          <!-- For freshwater conservation checking --> 
     111          <field field_ref="empmr"         name="wfo"      long_name="water_flux_into_sea_water"                     /> 
     112          <field field_ref="emp_oce"       name="emp_oce"                      /> 
     113          <field field_ref="emp_ice"       name="emp_ice"                      /> 
     114          <field field_ref="runoffs"       name="friver"   long_name="water_flux_into_sea_water_from_rivers"                   level="1" /> 
     115          <field field_ref="calving_cea"   name="calving" /> 
     116      <field field_ref="iceberg_cea"   name="iceberg" /> 
     117      <field field_ref="iceshelf_cea"  name="iceshelf" /> 
     118          <field field_ref="vfxice"        name="vfxice" /> 
     119          <field field_ref="vfxsnw"        name="vfxsnw" /> 
     120          <field field_ref="vfxsub"        name="vfxsub" /> 
     121          <field field_ref="vfxspr"        name="vfxspr" /> 
     122          <field field_ref="rain"          name="rain"      /> 
     123          <field field_ref="snow_ao_cea"   name="snow_ao_cea"      /> 
     124          <field field_ref="snow_ai_cea"   name="snow_ai_cea"      /> 
     125          <field field_ref="evap_ao_cea"   name="evap_ao_cea"      /> 
     126          <field field_ref="subl_ai_cea"   name="subl_ai_cea"      /> 
     127          <field field_ref="fmmflx"        name="fmmflx"  /> 
     128          <field field_ref="fwfisf"        name="fwfisf"  /> 
     129          <field field_ref="hflx_snow_ai_cea" name="hflx_snow_ai"  /> 
     130          <field field_ref="hflx_snow_ao_cea" name="hflx_snow_ao"  /> 
     131          <field field_ref="hflx_ice_cea"     name="hflx_ice"      /> 
     132          <field field_ref="hflx_rnf_cea"     name="hflx_rnf"      /> 
     133          <!-- For salt conservation checking --> 
     134          <field field_ref="saltflx"      name="sosflxdo"  /> 
     135          <!-- ice and snow --> 
     136          <field field_ref="snowpre"      /> 
     137          <field field_ref="utau_ice"         name="utau_ice" /> 
     138          <field field_ref="vtau_ice"         name="vtau_ice" /> 
     139        </file> 
    83140 
    84141      </file_group>  
     
    86143      <file_group id="5d" output_freq="5d"  output_level="10" enabled=".TRUE.">  <!-- 5d files -->    
    87144         
    88         <file id="file5" name_suffix="_grid_T" description="ocean T grid variables" > 
     145        <file id="file4" name_suffix="_grid_T" description="ocean T grid variables" > 
    89146          <field field_ref="e3t"  /> 
    90147          <field field_ref="toce"         name="thetao"   long_name="sea_water_potential_temperature"      operation="average" freq_op="5d" > @toce_e3t / @e3t </field> 
     
    97154          <field field_ref="empmr"        name="wfo"      long_name="water_flux_into_sea_water"                     /> 
    98155          <field field_ref="empbmr"       name="wfob"     long_name="water_flux_into_sea_water at prev time-step"    /> 
    99           <field field_ref="runoffs"      name="runoffs" /> 
     156         <field field_ref="runoffs"      name="friver"   long_name="water_flux_into_sea_water_from_rivers"                   level="1" /> 
    100157          <field field_ref="fmmflx"       name="fmmflx"  /> 
    101158          <field field_ref="iceconc"      name="siconc"  /> 
    102159        </file> 
    103160 
    104       <file id="file6" name_suffix="_SBC" description="surface fluxes variables" > <!-- time step automaticaly defined based on nn_fsbc --> 
    105           <field field_ref="empmr"        name="wfo"      long_name="water_flux_into_sea_water"                     /> 
    106           <field field_ref="qsr"           name="rsntds"      long_name="surface_net_downward_shortwave_flux"                                         level="1" /> 
    107           <field field_ref="qsr_oce"      name="qsr_oce"  long_name="downward shortwave flux at ocean surface"           /> 
    108           <field field_ref="qns_oce"      name="qns_oce"  long_name="downward non solar flux at ocean surface"           /> 
    109           <field field_ref="qt_oce"       name="qt_oce"   long_name="downward total flux at ocean surface"           /> 
    110           <field field_ref="qsr_ice"      name="qsr_ice"  long_name="downward shortwave flux at ice surface"           /> 
    111           <field field_ref="qns_ice"      name="qns_ice"  long_name="downward non solar flux at ice surface"           /> 
    112           <field field_ref="qtr_ice"      name="qtr_ice"  long_name="shortwave flux transmitted thru the ice"           /> 
    113           <field field_ref="qt_ice"       name="qt_ice"   long_name="downward total flux at ice surface"           /> 
    114           <field field_ref="saltflx"      name="sfx"  /> 
    115           <field field_ref="fmmflx"       name="fmmflx"  /> 
    116           <field field_ref="taum"         name="taum" /> 
    117           <field field_ref="wspd"         name="windsp"  /> 
    118           <field field_ref="precip"       name="precip" /> 
    119             <!-- ice and snow --> 
    120           <field field_ref="snowpre"      /> 
    121           <field field_ref="iceconc"          name="siconc"  /> 
    122           <field field_ref="utau_ice"         name="utau_ice" /> 
    123           <field field_ref="vtau_ice"         name="vtau_ice" /> 
    124        </file> 
    125  
    126         <file id="file7" name_suffix="_grid_U" description="ocean U grid variables" > 
     161        <file id="file5" name_suffix="_grid_U" description="ocean U grid variables" > 
    127162          <field field_ref="e3u"  /> 
    128           <field field_ref="uoce"         name="uo"      long_name="sea_water_x_velocity" operation="average" freq_op="5d" > @uoce_e3u / @e3u </field> 
    129163          <field field_ref="uocetr_eff"   name="uocetr_eff"  /> 
    130           <field field_ref="utau"         name="tauuo"   long_name="surface_downward_x_stress" /> 
    131164          <field field_ref="ahu_bbl"       /> 
    132165        </file> 
    133166         
    134         <file id="file8" name_suffix="_grid_V" description="ocean V grid variables" > 
     167        <file id="file6" name_suffix="_grid_V" description="ocean V grid variables" > 
    135168          <field field_ref="e3v"  /> 
    136           <field field_ref="voce"         name="vo"      long_name="sea_water_y_velocity" operation="average" freq_op="5d" > @voce_e3v / @e3v </field> 
    137169          <field field_ref="vocetr_eff"   name="vocetr_eff"  /> 
    138           <field field_ref="vtau"         name="tauvo"   long_name="surface_downward_y_stress" /> 
    139170          <field field_ref="ahv_bbl"       /> 
    140171        </file> 
    141172         
    142         <file id="file9" name_suffix="_grid_W" description="ocean W grid variables" > 
     173        <file id="file7" name_suffix="_grid_W" description="ocean W grid variables" > 
    143174          <field field_ref="e3w"  /> 
    144175          <field field_ref="woce"         name="wo"     /> 
     
    150181        </file> 
    151182 
    152         <file id="file25" name_suffix="_diaptr" description="diaptr variables" enabled=".true." > 
     183  </file_group>  
     184 
     185 
     186      <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- real monthly files --> 
     187 
     188        <file id="file8" name_suffix="_grid_T" > 
     189          <field field_ref="e3t" long_name="T-cell thickness" /> 
     190          <field field_ref="botpres"      name="pbo"      long_name="Pressure_at_sea_floor"                                          /> 
     191          <!-- pso : sea_water_pressure_at_sea_water_surface = 0 --> 
     192          <field field_ref="ssh"          name="zos"      long_name="sea_surface_height_above_geoid"                                 /> 
     193          <field field_ref="ssh2"         name="zossq"    long_name="square_of_sea_surface_height_above_geoid"             level="2" /> 
     194 
     195          <field field_ref="toce"         name="thetao"   long_name="sea_water_potential_temperature"   operation="average" freq_op="1mo" > @toce_e3t / @e3t </field>       
     196          <field field_ref="sst"          name="tos"      long_name="sea_surface_temperature"                              level="1" /> 
     197          <field field_ref="sst2"         name="tossq"    long_name="square_of_sea_surface_temperature"                    level="2" /> 
     198          <field field_ref="soce"         name="so"       long_name="sea_water_salinity"                operation="average" freq_op="1mo" > @soce_e3t / @e3t </field>        
     199          <field field_ref="sss"          name="sos"      long_name="sea_surface_salinity"                                 level="1" /> 
     200          <!-- diurnal cycle --> 
     201          <!-- sst --> 
     202          <field field_ref="sst"          name="sstdcymax"   long_name="max of sst diurnal cycle" operation="average" freq_op="1d" > @sstmax  </field> 
     203          <field field_ref="sst"          name="sstdcymin"   long_name="min of sst diurnal cycle" operation="average" freq_op="1d" > @sstmin </field> 
     204          <field field_ref="sst"          name="sstdcy"      long_name="amplitude of sst diurnal cycle" operation="average" freq_op="1d" > @sstmax - @sstmin </field> 
     205          <!-- sss --> 
     206          <field field_ref="sss"          name="sssdcymax"   long_name="max of sss diurnal cycle" operation="average" freq_op="1d" > @sssmax  </field> 
     207          <field field_ref="sss"          name="sssdcymin"   long_name="min of sss diurnal cycle" operation="average" freq_op="1d" > @sssmin </field> 
     208          <field field_ref="sss"          name="sssdcy"      long_name="amplitude of sss diurnal cycle" operation="average" freq_op="1d" > @sssmax - @sssmin </field> 
     209          <!-- mld --> 
     210          <field field_ref="mldr10_1"     name="mld10_1dcymax"   long_name="max of mld diurnal cycle" operation="average" freq_op="1d" > @mldr10_1max  </field> 
     211          <field field_ref="mldr10_1"     name="mld10_1dcymin"   long_name="min of mld diurnal cycle" operation="average" freq_op="1d" > @mldr10_1min  </field> 
     212          <field field_ref="mldr10_1"     name="mld10_1dcy"      long_name="amplitude of mld diurnal cycle" operation="average" freq_op="1d" > @mldr10_1max - @mldr10_1min  </field> 
     213          <!--  --> 
     214          <field field_ref="rhop"         name="rhopoto"  long_name="sea_water_potential_density"                          level="2" /> 
     215          <!-- no agessc : sea_water_age_since_surface_contact --> 
     216          <!-- no cfc11  : moles_per_unit_mass_of_cfc11_in_sea_water --> 
     217          <!-- msftbarot : ocean_barotropic_mass_streamfunction : offline --> 
     218          <!-- mlotst    :           ocean_mixed_layer_thickness_defined_by_sigma_t : must be done offline --> 
     219          <!-- mlotstsq  : square_of_ocean_mixed_layer_thickness_defined_by_sigma_t : must be done offline --> 
     220          <field field_ref="mldkz5"       name="omlmax"   long_name="ocean_mixed_layer_thickness_defined_by_mixing_scheme" level="2" operation="maximum" /> 
     221          <field field_ref="mldkz5"       name="mldkz5"   level="2"  /> 
     222          <field field_ref="mldr10_1"     name="mldr10_1" level="2" /> 
     223          <field field_ref="mldr10_1max"  name="mldr10_1max"  long_name="max of Mixed Layer Depth 0.01 ref.10m"              operation="maximum" /> 
     224          <!-- wfonocorr : water_flux_into_sea_water_without_flux_correction : emp - erp --> 
     225          <field field_ref="erp"          name="wfcorr"   long_name="water_flux_correction"                                   level="1" /> <!-- usually = 0 --> 
     226          <field field_ref="qns"           name="nshfls"      long_name="surface_net_downward_non_solar_flux"                                         level="1" /> 
     227          <field field_ref="qsr"           name="rsntds"      long_name="surface_net_downward_shortwave_flux"                                         level="1" /> 
     228          <field field_ref="qsr3d"         name="rsds"        long_name="downwelling_shortwave_flux_in_sea_water"                                     level="1" /> 
     229          <field field_ref="qrp"           name="hfcorr"      long_name="heat_flux_correction"                                                        level="1" /> 
     230      <!-- next variables available with key_diahth --> 
     231      <field field_ref="mlddzt"        level="1" /> 
     232      <field field_ref="mldr10_3"      level="1" /> 
     233      <field field_ref="mldr0_1"       level="1" /> 
     234      <field field_ref="mldr0_3"       level="1" /> 
     235      <field field_ref="mld_dt02"      level="1" /> 
     236      <field field_ref="topthdep"      level="1" /> 
     237      <field field_ref="pycndep"       level="1" /> 
     238      <field field_ref="BLT"           level="1" /> 
     239      <field field_ref="tinv"          level="1" /> 
     240      <field field_ref="depti"         level="1" /> 
     241      <!-- <field field_ref="20d"           level="1" /> --> 
     242      <!-- <field field_ref="28d"           level="1" /> --> 
     243      <field field_ref="hc300"         level="1" /> 
     244      <!-- next variables are additional for PISCES offline--> 
     245          <field field_ref="hdiv"         name="hdivtr"   long_name="horizontal divergence transport"      operation="average" freq_op="1mo" > @hdiv * @e3t </field> 
     246          <field field_ref="wspd"         name="windsp"  /> 
     247          <field field_ref="empbmr"       name="wfob"     long_name="water_flux_into_sea_water at prev time-step"    /> 
     248          <field field_ref="fmmflx"       name="fmmflx"  /> 
     249          <field field_ref="iceconc"      name="siconc"  /> 
     250          <!-- For heat conservation checking --> 
     251          <field field_ref="qt_oce"        name="qt_oce"   long_name="downward total flux at ocean surface"           /> 
     252          <field field_ref="qemp_oce"      name="qemp_oce" long_name="Downward Heat Flux from E-P over open ocean"           /> 
     253          <field field_ref="qt_ice"        name="qt_ice"   long_name="downward total flux at ice surface"           /> 
     254          <field field_ref="qemp_ice"      name="qemp_ice" long_name="Downward Heat Flux from E-P over ice"           /> 
     255          <field field_ref="hflx_rain_cea" name="hflx_rain_cea"      /> 
     256          <field field_ref="hflx_evap_cea" name="hflx_evap_cea"      /> 
     257          <field field_ref="hflx_snow_cea" name="hflx_snow_cea"      /> 
     258          <field field_ref="hflx_cal_cea"  name="hflx_cal_cea"      /> 
     259          <!-- For freshwater conservation checking --> 
     260          <field field_ref="empmr"         name="wfo"      long_name="water_flux_into_sea_water"                     /> 
     261          <field field_ref="emp_oce"       name="emp_oce"                      /> 
     262          <field field_ref="emp_ice"       name="emp_ice"                      /> 
     263          <field field_ref="runoffs"       name="friver"   long_name="water_flux_into_sea_water_from_rivers"                   level="1" /> 
     264          <field field_ref="calving_cea"   name="calving" /> 
     265      <field field_ref="iceberg_cea"   name="iceberg" /> 
     266      <field field_ref="iceshelf_cea"  name="iceshelf" /> 
     267          <field field_ref="vfxice"        name="vfxice" /> 
     268          <field field_ref="vfxsnw"        name="vfxsnw" /> 
     269          <field field_ref="vfxsub"        name="vfxsub" /> 
     270          <field field_ref="vfxspr"        name="vfxspr" /> 
     271          <field field_ref="rain"          name="rain"      /> 
     272          <field field_ref="snow_ao_cea"   name="snow_ao_cea"      /> 
     273          <field field_ref="snow_ai_cea"   name="snow_ai_cea"      /> 
     274          <field field_ref="evap_ao_cea"   name="evap_ao_cea"      /> 
     275          <field field_ref="subl_ai_cea"   name="subl_ai_cea"      /> 
     276          <!-- For salt conservation checking --> 
     277          <field field_ref="saltflx"      name="sosflxdo"  /> 
     278 
     279        </file> 
     280 
     281        <file id="file9" name_suffix="_grid_U" description="ocean U grid variables" > 
     282          <field field_ref="e3u"  /> 
     283          <field field_ref="ssu"          name="uos"     long_name="sea_surface_x_velocity"    /> 
     284          <field field_ref="uoce"         name="uo"      long_name="sea_water_x_velocity" operation="average" freq_op="1mo" > @uoce_e3u / @e3u </field> 
     285          <field field_ref="utau"         name="tauuo"   long_name="surface_downward_x_stress" /> 
     286          <field field_ref="uocetr_eff"   name="uocetr_eff"  /> 
     287          <field field_ref="ahu_bbl"       /> 
     288      <!-- available with key_diaar5 --> 
     289      <field field_ref="u_masstr"     name="vozomatr"  /> 
     290      <field field_ref="u_heattr"     name="sozohetr"  /> 
     291      <field field_ref="u_salttr"     name="sozosatr"  /> 
     292        </file> 
     293         
     294        <file id="file10" name_suffix="_grid_V" description="ocean V grid variables" > 
     295          <field field_ref="e3v"  /> 
     296          <field field_ref="ssv"          name="vos"     long_name="sea_surface_y_velocity"    /> 
     297          <field field_ref="voce"         name="vo"      long_name="sea_water_y_velocity" operation="average" freq_op="1mo" > @voce_e3v / @e3v </field> 
     298          <field field_ref="vtau"         name="tauvo"   long_name="surface_downward_y_stress" /> 
     299          <field field_ref="vocetr_eff"   name="vocetr_eff"  /> 
     300          <field field_ref="ahv_bbl"       /> 
     301      <!-- available with key_diaar5 --> 
     302      <field field_ref="v_masstr"     name="vomematr"  /> 
     303      <field field_ref="v_heattr"     name="somehetr"  /> 
     304      <field field_ref="v_salttr"     name="somesatr"  /> 
     305        </file> 
     306         
     307        <file id="file11" name_suffix="_grid_W" description="ocean W grid variables" > 
     308          <field field_ref="e3w"  /> 
     309          <field field_ref="woce"         name="wo"     /> 
     310          <field field_ref="avt"          name="difvho"  long_name="ocean_vertical_heat_diffusivity" /> 
     311          <!-- avs: available with key_zdfddm --> 
     312          <field field_ref="avs"          name="avs"         />  
     313          <field field_ref="avm"              name="avm"        /> 
     314          <!-- avt_evd: available with ln_zdfevd --> 
     315          <field field_ref="avt_evd"        name="avt_evd"  />  
     316          <field field_ref="av_wave"      name="av_wave" />  
     317          <field field_ref="bn2"             name="bn2"           />  
     318          <field field_ref="wocetr_eff"   name="wocetr_eff" />  
     319          <field field_ref="bflx_tmx"     name="bflx_tmx"   />  
     320          <field field_ref="pcmap_tmx"    name="pcmap_tmx"  />  
     321          <field field_ref="emix_tmx"     name="emix_tmx"   />     
     322          <field field_ref="w_masstr"     name="vovematr"  /> 
     323          <field field_ref="logavs"       name="difvsolog"  long_name="ocean_vertical_salt_diffusivity" operation="average" freq_op="1mo" > exp( @logavs ) </field> 
     324          <field field_ref="aht2d"        name="ahtt"   /> 
     325          <field field_ref="aht2d_eiv"    name="aeiv"   /> 
     326        </file> 
     327 
     328        <file id="file12" name_suffix="_scalar" description="scalar variables" enabled=".true." > 
     329 
     330          <!-- Volume --> 
     331          <!-- global contents --> 
     332          <field field_ref="voltot"       grid_ref="grid_1point"   name="scvoltot"  /> 
     333          <field field_ref="sshtot"       grid_ref="grid_1point"   name="scsshtot"  /> 
     334          <field field_ref="sshsteric"    grid_ref="grid_1point"   name="scsshste"  /> 
     335          <field field_ref="sshthster"    grid_ref="grid_1point"   name="scsshtst"  /> 
     336          <field field_ref="masstot"      grid_ref="grid_1point"   name="scmastot"  /> 
     337          <field field_ref="temptot"      grid_ref="grid_1point"   name="sctemtot"  /> 
     338          <field field_ref="saltot"       grid_ref="grid_1point"   name="scsaltot"  /> 
     339           
     340          <!-- global drifts (conservation checks) --> 
     341          <field field_ref="bgtemper"     grid_ref="grid_1point"   name="bgtemper"    /> 
     342          <field field_ref="bgsaline"     grid_ref="grid_1point"   name="bgsaline"    /> 
     343          <field field_ref="bgheatco"     grid_ref="grid_1point"   name="bgheatco"    /> 
     344          <field field_ref="bgheatfx"     grid_ref="grid_1point"   name="bgheatfx"    /> 
     345          <field field_ref="bgsaltco"     grid_ref="grid_1point"   name="bgsaltco"    /> 
     346          <field field_ref="bgvolssh"     grid_ref="grid_1point"   name="bgvolssh"    /> 
     347          <field field_ref="bgvole3t"     grid_ref="grid_1point"   name="bgvole3t"    /> 
     348 
     349          <!-- global surface forcings  --> 
     350          <field field_ref="bgfrcvol"     grid_ref="grid_1point"   name="bgfrcvol"    /> 
     351          <field field_ref="bgfrctem"     grid_ref="grid_1point"   name="bgfrctem"    /> 
     352          <field field_ref="bgfrchfx"     grid_ref="grid_1point"   name="bgfrchfx"    /> 
     353          <field field_ref="bgfrcsal"     grid_ref="grid_1point"   name="bgfrcsal"    /> 
     354 
     355          <!-- Surface --> 
     356          <!-- global contents --> 
     357          <field field_ref="ibgvol_tot"     grid_ref="grid_1point"  name="ibgvol_tot"   /> 
     358          <field field_ref="sbgvol_tot"     grid_ref="grid_1point"  name="sbgvol_tot"   /> 
     359          <field field_ref="ibgarea_tot"    grid_ref="grid_1point"  name="ibgarea_tot"  /> 
     360          <field field_ref="ibgsalt_tot"    grid_ref="grid_1point"  name="ibgsalt_tot"  /> 
     361          <field field_ref="ibgheat_tot"    grid_ref="grid_1point"  name="ibgheat_tot"  /> 
     362          <field field_ref="sbgheat_tot"    grid_ref="grid_1point"  name="sbgheat_tot"  /> 
     363           
     364          <!-- global drifts (conservation checks) --> 
     365          <field field_ref="ibgvolume"      grid_ref="grid_1point"  name="ibgvolume"    /> 
     366          <field field_ref="ibgsaltco"      grid_ref="grid_1point"  name="ibgsaltco"    /> 
     367          <field field_ref="ibgheatco"      grid_ref="grid_1point"  name="ibgheatco"    /> 
     368          <field field_ref="ibgheatfx"      grid_ref="grid_1point"  name="ibgheatfx"    /> 
     369           
     370          <!-- global forcings  --> 
     371          <field field_ref="ibgfrcvoltop"   grid_ref="grid_1point"  name="ibgfrcvoltop" /> 
     372          <field field_ref="ibgfrcvolbot"   grid_ref="grid_1point"  name="ibgfrcvolbot" /> 
     373          <field field_ref="ibgfrctemtop"   grid_ref="grid_1point"  name="ibgfrctemtop" /> 
     374          <field field_ref="ibgfrctembot"   grid_ref="grid_1point"  name="ibgfrctembot" /> 
     375          <field field_ref="ibgfrcsal"      grid_ref="grid_1point"  name="ibgfrcsal"    /> 
     376          <field field_ref="ibgfrchfxtop"   grid_ref="grid_1point"  name="ibgfrchfxtop" /> 
     377          <field field_ref="ibgfrchfxbot"   grid_ref="grid_1point"  name="ibgfrchfxbot" /> 
     378           
     379        </file> 
     380 
     381        <file id="file13" name_suffix="_diaptr" description="diaptr variables" enabled=".true." > 
    153382          <field field_ref="zomsfglo"          name="zomsfglo"  grid_ref="grid_ptr_W_3D" /> 
    154383          <field field_ref="zomsfatl"          name="zomsfatl"  grid_ref="grid_ptr_W_3D" /> 
     
    176405          <field field_ref="sopstldf"          name="sopstldf"  grid_ref="grid_ptr_T_2D" /> 
    177406        </file> 
    178  
    179   </file_group>  
    180  
    181  
    182       <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- real monthly files --> 
    183  
    184         <file id="file10" name_suffix="_grid_T" > 
    185           <field field_ref="e3t" long_name="T-cell thickness" /> 
    186           <field field_ref="botpres"      name="pbo"      long_name="Pressure_at_sea_floor"                                          /> 
    187           <!-- pso : sea_water_pressure_at_sea_water_surface = 0 --> 
    188           <field field_ref="ssh"          name="zos"      long_name="sea_surface_height_above_geoid"                                 /> 
    189           <field field_ref="ssh2"         name="zossq"    long_name="square_of_sea_surface_height_above_geoid"             level="2" /> 
    190  
    191           <field field_ref="toce"         name="thetao"   long_name="sea_water_potential_temperature"   operation="average" freq_op="1mo" > @toce_e3t / @e3t </field>       
    192           <field field_ref="sst"          name="tos"      long_name="sea_surface_temperature"                              level="1" /> 
    193           <field field_ref="sst2"         name="tossq"    long_name="square_of_sea_surface_temperature"                    level="2" /> 
    194           <field field_ref="soce"         name="so"       long_name="sea_water_salinity"                operation="average" freq_op="1mo" > @soce_e3t / @e3t </field>        
    195           <field field_ref="sss"          name="sos"      long_name="sea_surface_salinity"                                 level="1" /> 
    196           <field field_ref="rhop"         name="rhopoto"  long_name="sea_water_potential_density"                          level="2" /> 
    197           <!-- no agessc : sea_water_age_since_surface_contact --> 
    198           <!-- no cfc11  : moles_per_unit_mass_of_cfc11_in_sea_water --> 
    199           <!-- msftbarot : ocean_barotropic_mass_streamfunction : offline --> 
    200           <!-- mlotst    :           ocean_mixed_layer_thickness_defined_by_sigma_t : must be done offline --> 
    201           <!-- mlotstsq  : square_of_ocean_mixed_layer_thickness_defined_by_sigma_t : must be done offline --> 
    202           <field field_ref="mldkz5"       name="omlmax"   long_name="ocean_mixed_layer_thickness_defined_by_mixing_scheme" level="2" operation="maximum" /> 
    203           <field field_ref="mldkz5"       name="mldkz5"   level="2"  /> 
    204           <field field_ref="mldr10_1"     name="mldr10_1" level="2" /> 
    205           <field field_ref="mldr10_1max"  name="mldr10_1max"  long_name="max of Mixed Layer Depth 0.01 ref.10m"              operation="maximum" /> 
    206           <field field_ref="runoffs"      name="friver"   long_name="water_flux_into_sea_water_from_rivers"                   level="1" /> 
    207           <field field_ref="empmr"        name="wfo"      long_name="water_flux_into_sea_water"                               level="1" /> 
    208           <!-- wfonocorr : water_flux_into_sea_water_without_flux_correction : emp - erp --> 
    209           <field field_ref="erp"          name="wfcorr"   long_name="water_flux_correction"                                   level="1" /> <!-- usually = 0 --> 
    210           <field field_ref="qns"           name="nshfls"      long_name="surface_net_downward_non_solar_flux"                                         level="1" /> 
    211           <field field_ref="qsr"           name="rsntds"      long_name="surface_net_downward_shortwave_flux"                                         level="1" /> 
    212           <field field_ref="qsr3d"         name="rsds"        long_name="downwelling_shortwave_flux_in_sea_water"                                     level="1" /> 
    213           <field field_ref="qrp"           name="hfcorr"      long_name="heat_flux_correction"                                                        level="1" /> 
    214         </file> 
    215  
    216         <file id="file11" name_suffix="_grid_U" description="ocean U grid variables" > 
    217           <field field_ref="e3u"  /> 
    218           <field field_ref="ssu"          name="uos"     long_name="sea_surface_x_velocity"    /> 
    219           <field field_ref="uoce"         name="uo"      long_name="sea_water_x_velocity" operation="average" freq_op="1mo" > @uoce_e3u / @e3u </field> 
    220           <field field_ref="utau"         name="tauuo"   long_name="surface_downward_x_stress" /> 
    221         </file> 
    222          
    223         <file id="file12" name_suffix="_grid_V" description="ocean V grid variables" > 
    224           <field field_ref="e3v"  /> 
    225           <field field_ref="ssv"          name="vos"     long_name="sea_surface_y_velocity"    /> 
    226           <field field_ref="voce"         name="vo"      long_name="sea_water_y_velocity" operation="average" freq_op="1mo" > @voce_e3v / @e3v </field> 
    227           <field field_ref="vtau"         name="tauvo"   long_name="surface_downward_y_stress" /> 
    228         </file> 
    229          
    230         <file id="file13" name_suffix="_grid_W" description="ocean W grid variables" > 
    231           <field field_ref="e3w"  /> 
    232           <field field_ref="woce"         name="wo"     /> 
    233           <field field_ref="avt"          name="difvho"  long_name="ocean_vertical_heat_diffusivity" /> 
    234         </file> 
    235  
    236  
    237407      </file_group> 
    238408 
     
    245415      <file_group id="1y"  output_freq="1y" output_level="10" enabled=".TRUE."> <!-- real yearly files --> 
    246416 
    247     <file id="file17" name_suffix="_grid_T" description="ocean T grid variables" > 
    248       <field field_ref="e3t"  /> 
    249       <field field_ref="sst"          name="tos"      long_name="sea_surface_temperature"                       /> 
    250       <field field_ref="sss"          name="sos"      long_name="sea_surface_salinity"                          /> 
    251       <field field_ref="ssh"          name="zos"      long_name="sea_surface_height_above_geoid"                /> 
    252       <field field_ref="toce"         name="thetao"   long_name="sea_water_potential_temperature"      operation="average" freq_op="1y" > @toce_e3t / @e3t </field>         
    253       <field field_ref="soce"         name="so"       long_name="sea_water_salinity"                   operation="average" freq_op="1y" > @soce_e3t / @e3t </field>          
    254       <field field_ref="sst2"         name="tossq"    long_name="square_of_sea_surface_temperature"             /> 
    255       <field field_ref="ssh2"         name="zossq"    long_name="square_of_sea_surface_height_above_geoid"      /> 
    256       <field field_ref="mldr10_1"     /> 
    257       <field field_ref="mldkz5"       name="omlmax"   long_name="ocean_mixed_layer_thickness_defined_by_mixing_scheme" level="2" operation="maximum" /> 
    258       <field field_ref="runoffs"      name="friver"   long_name="water_flux_into_sea_water_from_rivers"                   level="1" /> 
    259       <field field_ref="empmr"        name="wfo"      long_name="water_flux_into_sea_water"                               level="1" /> 
    260       <field field_ref="erp"          name="wfcorr"   long_name="water_flux_correction"                                   level="1" /> <!-- usually = 0 --> 
    261       <field field_ref="qns"           name="nshfls"      long_name="surface_net_downward_non_solar_flux"                                         level="1" /> 
    262       <field field_ref="qsr"           name="rsntds"      long_name="surface_net_downward_shortwave_flux"                                         level="1" /> 
    263       <field field_ref="qsr3d"         name="rsds"        long_name="downwelling_shortwave_flux_in_sea_water"                                     level="1" /> 
    264       <field field_ref="qt"           name="tohfls"   long_name="surface_net_downward_total_heat_flux"          /> 
    265       <field field_ref="saltflx"      name="sosflxdo"  /> 
    266       <field field_ref="taum"         name="taum" /> 
    267       <field field_ref="wspd"         name="sowindsp"  /> 
    268        <field field_ref="precip"       name="soprecip" /> 
    269        <!-- available with ln_blk_clio or ln_blk_core --> 
    270        <field field_ref="qns_oce"      name="sonshdoo"  /> 
    271        <field field_ref="qlw_oce"      name="solwhdoo"  /> 
    272        <field field_ref="qsb_oce"      name="sosehdoo"  /> 
    273        <field field_ref="qla_oce"      name="solahdoo"  /> 
    274        <field field_ref="taum_oce"     name="sowndsto"  /> 
    275         <!-- ice and snow --> 
    276        <field field_ref="snowpre"      name="isnowpre"/> 
    277        <field field_ref="utau_ice"     name="iicestru" /> 
    278        <field field_ref="vtau_ice"     name="iicestrv" /> 
    279      </file> 
    280  
    281     <file id="file18" name_suffix="_grid_U" description="ocean U grid variables" > 
    282       <field field_ref="e3u"  /> 
    283       <field field_ref="ssu"          name="uos"     long_name="sea_surface_x_velocity"    /> 
    284       <field field_ref="uoce"         name="uo"      long_name="sea_water_x_velocity"      operation="average" freq_op="1y" > @uoce_e3u / @e3u </field>  
    285       <field field_ref="utau"         name="tauuo"   long_name="surface_downward_x_stress" /> 
    286       <field field_ref="uocetr_eff"   name="uocetr_eff"  /> 
    287     </file> 
    288  
    289     <file id="file19" name_suffix="_grid_V" description="ocean V grid variables" > 
    290       <field field_ref="e3v"  /> 
    291       <field field_ref="ssv"          name="vos"     long_name="sea_surface_y_velocity"    /> 
    292       <field field_ref="voce"         name="vo"      long_name="sea_water_y_velocity"     operation="average" freq_op="1y" > @voce_e3v / @e3v </field> 
    293       <field field_ref="vtau"         name="tauvo"   long_name="surface_downward_y_stress" /> 
    294       <field field_ref="vocetr_eff"   name="vocetr_eff"  /> 
    295     </file> 
    296  
    297      <file id="file20" name_suffix="_grid_W" description="ocean W grid variables" > 
    298       <field field_ref="e3w"  /> 
    299       <field field_ref="woce"         name="wo"      long_name="ocean vertical velocity"         /> 
    300       <field field_ref="avt"          name="difvho"  long_name="ocean_vertical_heat_diffusivity" /> 
    301       <field field_ref="wocetr_eff"   name="wocetr_eff"  /> 
    302       <field field_ref="aht2d"        name="aht2d_max"   long_name="max of lateral eddy diffusivity"        operation="maximum" /> 
    303       <field field_ref="aht2d_eiv"    name="aht2d_eiv_max"  long_name="max of EIV lateral eddy diffusivity" operation="maximum" /> 
    304       <field field_ref="avt_evd"      name="avt_evd"    /> 
    305       <field field_ref="av_wave"      name="av_wave"    /> 
    306       <field field_ref="bn2"          name="bn2"        /> 
    307       <field field_ref="bflx_tmx"     name="bflx_tmx"   /> 
    308       <field field_ref="pcmap_tmx"    name="pcmap_tmx"  /> 
    309       <field field_ref="emix_tmx"     name="emix_tmx"   /> 
    310       <field field_ref="av_ratio"     name="av_ratio"   /> 
    311     </file> 
     417 
     418        <file id="file14" name_suffix="_grid_T" description="ocean T grid variables" > 
     419          <field field_ref="e3t"  /> 
     420          <field field_ref="sst"          name="tos"      long_name="sea_surface_temperature"                       /> 
     421          <field field_ref="sss"          name="sos"      long_name="sea_surface_salinity"                          /> 
     422          <field field_ref="ssh"          name="zos"      long_name="sea_surface_height_above_geoid"                /> 
     423          <field field_ref="toce"         name="thetao"   long_name="sea_water_potential_temperature"      operation="average" freq_op="1y" > @toce_e3t / @e3t </field>         
     424          <field field_ref="soce"         name="so"       long_name="sea_water_salinity"                   operation="average" freq_op="1y" > @soce_e3t / @e3t </field>          
     425          <field field_ref="sst2"         name="tossq"    long_name="square_of_sea_surface_temperature"             /> 
     426          <field field_ref="ssh2"         name="zossq"    long_name="square_of_sea_surface_height_above_geoid"      /> 
     427          <field field_ref="mldr10_1"     /> 
     428          <field field_ref="mldkz5"       name="omlmax"   long_name="ocean_mixed_layer_thickness_defined_by_mixing_scheme" level="2" operation="maximum" /> 
     429          <field field_ref="erp"          name="wfcorr"   long_name="water_flux_correction"                                   level="1" /> <!-- usually = 0 --> 
     430          <field field_ref="qns"          name="nshfls"      long_name="surface_net_downward_non_solar_flux"                                         level="1" /> 
     431          <field field_ref="qsr"          name="rsntds"      long_name="surface_net_downward_shortwave_flux"                                         level="1" /> 
     432          <field field_ref="qsr3d"        name="rsds"        long_name="downwelling_shortwave_flux_in_sea_water"                                     level="1" /> 
     433          <field field_ref="qt"           name="tohfls"   long_name="surface_net_downward_total_heat_flux"          /> 
     434          <field field_ref="taum"         name="taum" /> 
     435          <field field_ref="wspd"         name="sowindsp"  /> 
     436          <field field_ref="precip"       name="soprecip" /> 
     437          <!-- available with ln_blk_clio or ln_blk_core --> 
     438          <field field_ref="qns_oce"      name="sonshdoo"  /> 
     439          <field field_ref="qlw_oce"      name="solwhdoo"  /> 
     440          <field field_ref="qsb_oce"      name="sosehdoo"  /> 
     441          <field field_ref="qla_oce"      name="solahdoo"  /> 
     442          <field field_ref="taum_oce"     name="sowndsto"  /> 
     443          <!-- ice and snow --> 
     444          <field field_ref="snowpre"      name="isnowpre"/> 
     445          <field field_ref="utau_ice"     name="iicestru" /> 
     446          <field field_ref="vtau_ice"     name="iicestrv" /> 
     447          <!-- For heat conservation checking --> 
     448          <field field_ref="qt_oce"        name="qt_oce"   long_name="downward total flux at ocean surface"           /> 
     449          <field field_ref="qemp_oce"      name="qemp_oce" long_name="Downward Heat Flux from E-P over open ocean"           /> 
     450          <field field_ref="qt_ice"        name="qt_ice"   long_name="downward total flux at ice surface"           /> 
     451          <field field_ref="qemp_ice"      name="qemp_ice" long_name="Downward Heat Flux from E-P over ice"           /> 
     452          <field field_ref="hflx_rain_cea" name="hflx_rain_cea"      /> 
     453          <field field_ref="hflx_evap_cea" name="hflx_evap_cea"      /> 
     454          <field field_ref="hflx_snow_cea" name="hflx_snow_cea"      /> 
     455          <field field_ref="hflx_cal_cea"  name="hflx_cal_cea"      /> 
     456          <!-- For freshwater conservation checking --> 
     457          <field field_ref="empmr"         name="wfo"      long_name="water_flux_into_sea_water"                     /> 
     458          <field field_ref="emp_oce"       name="emp_oce"                      /> 
     459          <field field_ref="emp_ice"       name="emp_ice"                      /> 
     460          <field field_ref="runoffs"       name="friver"   long_name="water_flux_into_sea_water_from_rivers"                   level="1" /> 
     461          <field field_ref="calving_cea"   name="calving" /> 
     462      <field field_ref="iceberg_cea"   name="iceberg" /> 
     463      <field field_ref="iceshelf_cea"  name="iceshelf" /> 
     464          <field field_ref="vfxice"        name="vfxice" /> 
     465          <field field_ref="vfxsnw"        name="vfxsnw" /> 
     466          <field field_ref="vfxsub"        name="vfxsub" /> 
     467          <field field_ref="vfxspr"        name="vfxspr" /> 
     468          <field field_ref="rain"          name="rain"      /> 
     469          <field field_ref="snow_ao_cea"   name="snow_ao_cea"      /> 
     470          <field field_ref="snow_ai_cea"   name="snow_ai_cea"      /> 
     471          <field field_ref="evap_ao_cea"   name="evap_ao_cea"      /> 
     472          <field field_ref="subl_ai_cea"   name="subl_ai_cea"      /> 
     473          <!-- For salt conservation checking --> 
     474          <field field_ref="saltflx"      name="sosflxdo"  /> 
     475        </file> 
     476         
     477        <file id="file15" name_suffix="_grid_U" description="ocean U grid variables" > 
     478          <field field_ref="e3u"  /> 
     479          <field field_ref="ssu"          name="uos"     long_name="sea_surface_x_velocity"    /> 
     480          <field field_ref="uoce"         name="uo"      long_name="sea_water_x_velocity"      operation="average" freq_op="1y" > @uoce_e3u / @e3u </field>  
     481          <field field_ref="utau"         name="tauuo"   long_name="surface_downward_x_stress" /> 
     482          <field field_ref="uocetr_eff"   name="uocetr_eff"  /> 
     483        </file> 
     484         
     485        <file id="file16" name_suffix="_grid_V" description="ocean V grid variables" > 
     486          <field field_ref="e3v"  /> 
     487          <field field_ref="ssv"          name="vos"     long_name="sea_surface_y_velocity"    /> 
     488          <field field_ref="voce"         name="vo"      long_name="sea_water_y_velocity"     operation="average" freq_op="1y" > @voce_e3v / @e3v </field> 
     489          <field field_ref="vtau"         name="tauvo"   long_name="surface_downward_y_stress" /> 
     490          <field field_ref="vocetr_eff"   name="vocetr_eff"  /> 
     491        </file> 
     492         
     493        <file id="file17" name_suffix="_grid_W" description="ocean W grid variables" > 
     494          <field field_ref="e3w"  /> 
     495          <field field_ref="woce"         name="wo"      long_name="ocean vertical velocity"         /> 
     496          <field field_ref="avt"          name="difvho"  long_name="ocean_vertical_heat_diffusivity" /> 
     497          <field field_ref="wocetr_eff"   name="wocetr_eff"  /> 
     498          <field field_ref="avt_evd"      name="avt_evd"    /> 
     499          <field field_ref="av_wave"      name="av_wave"    /> 
     500          <field field_ref="bn2"          name="bn2"        /> 
     501          <field field_ref="bflx_tmx"     name="bflx_tmx"   /> 
     502          <field field_ref="pcmap_tmx"    name="pcmap_tmx"  /> 
     503          <field field_ref="emix_tmx"     name="emix_tmx"   /> 
     504          <field field_ref="av_ratio"     name="av_ratio"   /> 
     505        </file> 
     506         
     507        <file id="file18" name_suffix="_diaptr" description="diaptr variables" enabled=".TRUE." > 
     508          <field field_ref="zotemglo" grid_ref="grid_ptr_T_3D"  /> 
     509          <field field_ref="zosalglo" grid_ref="grid_ptr_T_3D"  /> 
     510          <field field_ref="zosrfglo" grid_ref="grid_ptr_T_3D"  /> 
     511          <field field_ref="zomsfglo" grid_ref="grid_ptr_W_3D"  /> 
     512          <field field_ref="zotematl" grid_ref="grid_ptr_T_3D"  /> 
     513          <field field_ref="zosalatl" grid_ref="grid_ptr_T_3D"  /> 
     514          <field field_ref="zosrfatl" grid_ref="grid_ptr_T_3D"  /> 
     515          <field field_ref="zomsfatl" grid_ref="grid_ptr_W_3D"  /> 
     516          <field field_ref="zotempac" grid_ref="grid_ptr_T_3D"   /> 
     517          <field field_ref="zosalpac" grid_ref="grid_ptr_T_3D"  /> 
     518          <field field_ref="zosrfpac" grid_ref="grid_ptr_T_3D"  /> 
     519           
     520        </file>    
     521 
    312522      </file_group> 
    313523 
  • CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/PARAM/file_def_nemo-pisces.xml

    r2870 r3175  
    2626      <file_group id="1d" output_freq="1d"  output_level="10" enabled=".TRUE.">  <!-- 5d files -->    
    2727 
    28         <file id="file4" name_suffix="_bioscalar" description="pisces sms variables" > 
     28        <file id="file20" name_suffix="_bioscalar" description="pisces sms variables" > 
    2929          <field field_ref="tdenit"   name="tdenit"   grid_ref="grid_1point" unit="TgN/yr" operation="instant" > tdenit * 14. * 86400. * 365. / 1e12 </field> 
    3030          <field field_ref="tnfix"    name="tnfix"    grid_ref="grid_1point" unit="TgN/yr" operation="instant" > tnfix * 14. * 86400. * 365. / 1e12 </field> 
     
    4747 
    4848 
    49         <file id="file15" name_suffix="_ptrc_T" description="pisces sms variables" > 
     49        <file id="file21" name_suffix="_ptrc_T" description="pisces sms variables" > 
    5050          <field field_ref="DIC"       name="DIC"      operation="average" freq_op="1mo" > @DIC_E3T / @e3t </field> 
    5151          <field field_ref="Alkalini"  name="Alkalini" operation="average" freq_op="1mo" > @Alkalini_E3T / @e3t </field> 
     
    5959       </file> 
    6060 
    61        <file id="file16" name_suffix="_diad_T" description="additional pisces diagnostics" > 
     61       <file id="file22" name_suffix="_diad_T" description="additional pisces diagnostics" > 
    6262         <field field_ref="Cflx"      name="Cflx"    /> 
    6363         <field field_ref="Dpco2"     name="Dpco2"   /> 
     
    6868         <field field_ref="EPC100"    name="EPC100"  /> 
    6969       </file> 
     70 
     71      <file id="file23" name_suffix="_bioscalar" description="pisces sms variables" > 
     72          <field field_ref="tdenit"   name="tdenit"   grid_ref="grid_1point" unit="TgN/yr" operation="instant" > tdenit * 14. * 86400. * 365. / 1e12 </field> 
     73          <field field_ref="tnfix"    name="tnfix"    grid_ref="grid_1point" unit="TgN/yr" operation="instant" > tnfix * 14. * 86400. * 365. / 1e12 </field> 
     74          <field field_ref="tcflx"    name="tcflx"    grid_ref="grid_1point" unit="PgC/yr" operation="instant" > tcflx * -1. * 12. * 86400. * 365. / 1e15 </field> 
     75          <field field_ref="tcflxcum" name="tcflxcum" grid_ref="grid_1point" unit="PgC"    operation="instant" > tcflxcum * -1. * 12. / 1e15 </field> 
     76          <field field_ref="tcexp"    name="tcexp"    grid_ref="grid_1point" unit="PgC/yr" operation="instant" > tcexp * 12. * 86400. * 365. / 1e15 </field> 
     77          <field field_ref="tintpp"   name="tintpp"   grid_ref="grid_1point" unit="PgC/yr" operation="instant" > tintpp * 12. * 86400. * 365. / 1e15 </field> 
     78          <field field_ref="pno3tot"  name="pno3tot"  grid_ref="grid_1point" unit="umolN"  operation="instant" > pno3tot * 16. / 122. * 1e6 </field> 
     79          <field field_ref="ppo4tot"  name="ppo4tot"  grid_ref="grid_1point" unit="umolP"  operation="instant" > ppo4tot * 1. / 122. * 1e6 </field> 
     80          <field field_ref="psiltot"  name="psiltot"  grid_ref="grid_1point" unit="umolC"  operation="instant" > psiltot * 1e6  </field> 
     81          <field field_ref="palktot"  name="palktot"  grid_ref="grid_1point" unit="umolC"  operation="instant" > palktot * 1e6  </field> 
     82          <field field_ref="pfertot"  name="pfertot"  grid_ref="grid_1point" unit="nmolFe" operation="instant" > pfertot * 1e9  </field> 
     83        </file> 
     84 
    7085 
    7186      </file_group> 
     
    8095 
    8196  
    82        <file id="file21" name_suffix="_ptrc_T" description="pisces sms variables" > 
     97       <file id="file24" name_suffix="_ptrc_T" description="pisces sms variables" > 
    8398          <field field_ref="DIC"       name="DIC"      operation="average" freq_op="1y" > @DIC_E3T / @e3t </field> 
    8499          <field field_ref="Alkalini"  name="Alkalini" operation="average" freq_op="1y" > @Alkalini_E3T / @e3t </field> 
     
    107122    </file> 
    108123 
    109    <file id="file22" name_suffix="_diad_T" description="additional pisces diagnostics" > 
     124   <file id="file25" name_suffix="_diad_T" description="additional pisces diagnostics" > 
    110125       <field field_ref="PH"         name="PH" /> 
    111126       <field field_ref="PAR"        name="PAR"   /> 
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