Changeset 4873


Ignore:
Timestamp:
12/19/19 17:35:10 (4 years ago)
Author:
acosce
Message:

Add flag Reproducibility_after_restart in OPA to allow simulation to be identical even if we make a restart during the simulation

Location:
CONFIG/UNIFORM/v6
Files:
11 edited

Legend:

Unmodified
Added
Removed

  • CONFIG/UNIFORM/v6/IPSLCM5A2/EXPERIMENTS/IPSLCM/pdControl/COMP/opa9.card

    r3005 r4873  
    55ORCA_version=${config_UserChoices_ORCA_version:-ORCA2.3} 
    66mesh_mask= n 
     7Reproducibility_after_restart= y 
    78 
    89[InitialStateFiles] 

  • CONFIG/UNIFORM/v6/IPSLCM5A2/EXPERIMENTS/IPSLCM/piControl/COMP/opa9.card

    r3005 r4873  
    55ORCA_version=${config_UserChoices_ORCA_version:-ORCA2.3} 
    66mesh_mask= n 
     7Reproducibility_after_restart= y 
    78 
    89[InitialStateFiles] 

  • CONFIG/UNIFORM/v6/IPSLCM5A2/GENERAL/DRIVER/opa9.driver

    r2876 r4873  
    105105    OPA_NSTOCK="${OPA_NITEND}" 
    106106 
     107    ##-- Additionnal Restart Option to force reproducibility ; force kt to kt red in restart file 
     108    ## ${opa9_UserChoices_Reproducibility_after_restart} 
     109     
     110    IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/COMP/opa9.card UserChoices Reproducibility_after_restart 
     111 
    107112    ##-- Restart configuration 
    108     if ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_OCE_Restart}" = "n" ] ) ; then 
     113    if ( [ "${opa9_UserChoices_Reproducibility_after_restart}" = "y" ] ) ; then 
     114        OPA_LRSTAR=.TRUE. 
     115        OPA_NRSTDT=2 
     116        #echo "OPA RESTART" 
     117        IGCM_debug_Print 1 'WARNING : dangerous option for NEMO opa9 pisces lim3' 
     118        IGCM_debug_Print 1 'Reproducibility_after_Restart forced ie kt forced to kt red in restart file : ' ${opa9_UserChoices_Reproducibility_after_restart} 
     119        OPA_NMSH=0 
     120    elif ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_OCE_Restart}" = "n" ] ) ; then 
    109121        OPA_LRSTAR=.FALSE. 
    110122        OPA_NRSTDT=0 
    … …  
    140152    esac 
    141153 
     154    if ( [ "${opa9_UserChoices_Reproducibility_after_restart}" = "y" ] ) ; then 
     155        ##-- choose the right restart file 
     156        NEMO_RESTART_FILE=restartopa.nc 
     157        [ -f restartopa_0000.nc ] && NEMO_RESTART_FILE=restartopa_0000.nc 
     158        ##-- Getting from restart file the last time step of the run at which we want to re-start 
     159        NEMO_KT_FROM_RESTART=$(ncdump -v kt ${NEMO_RESTART_FILE}|grep 'kt ='|awk '{print $3}' ) 
     160 
     161        if ( [ "${CumulPeriod}" -eq 1 ] ) ; then 
     162            ## Force the date in the restart file to be the last day before the begining of the new run 
     163            dateendprevious=$( IGCM_date_AddDaysToGregorianDate ${DateBegin} -1 ) 
     164            IGCM_debug_Print 1 "Previous Date  ${dateendprevious}" 
     165            IGCM_debug_Print 1 "cmd done to modify NEMO restartfile:   ncap2 -s ndastp=${dateendprevious} ${NEMO_RESTART_FILE}  tmp.nc" 
     166            if [ -f restartopa_0000.nc ] ; then 
     167                typeset -Z4 ncpu=0 
     168                while [ $ncpu -lt ${OCE_PROC_MPI} ] ; do 
     169                    ncap2 -s "ndastp=${dateendprevious}" restartopa_${ncpu}.nc  tmp.nc 
     170                    mv tmp.nc restartopa_${ncpu}.nc 
     171                    (( ncpu = ncpu + 1 )) 
     172                done 
     173            else 
     174                ncap2 -s "ndastp=${dateendprevious}" ${NEMO_RESTART_FILE}  tmp.nc 
     175                mv tmp.nc ${NEMO_RESTART_FILE} 
     176            fi 
     177            ##-- Getting from restart file the "new" restart date of run at which we want to re-start 
     178            NEMO_NDASTP_FROM_RESTART=$(ncdump -v ndastp ${NEMO_RESTART_FILE}|grep 'ndastp ='|awk '{print $3}' ) 
     179            IGCM_debug_Print 1 "NEMO_NDASTP (from Restart) for 1st Period       : ${NEMO_NDASTP_FROM_RESTART}" 
     180 
     181        fi 
     182 
     183        (( NEMO_NIT000 = NEMO_KT_FROM_RESTART + 1 )) 
     184        (( NEMO_NITEND = NEMO_KT_FROM_RESTART + OPA_NITEND - OPA_NIT000 + 1 )) 
     185        IGCM_debug_Print 1 "NEMO_NIT000 (from Restart)        : ${NEMO_NIT000}" 
     186        IGCM_debug_Print 1 "NEMO_NITEND (from Restart + ... ) : ${NEMO_NITEND}" 
     187        ##-- We force one restart file at the end of the trunk 
     188        OPA_NSTOCK="${NEMO_NITEND}" 
     189        OPA_NIT000="${NEMO_NIT000}" 
     190        OPA_NITEND="${NEMO_NITEND}" 
     191    fi 
     192 
    142193    typeset -r PRECIS=8 
    143194    NEMO_END=$( echo $( awk "BEGIN { printf \"%0${PRECIS}d\",${OPA_NITEND} }" ) )  

  • CONFIG/UNIFORM/v6/IPSLCM5A2/GENERAL/DRIVER/pisces.driver

    r2880 r4873  
    2626 
    2727    ##-- Restart configuration 
    28     if ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_MBG_Restart}" = "n" ] ) ; then 
     28 
     29    ##-- Restart configuration 
     30    if ( [ "${opa9_UserChoices_Reproducibility_after_restart}" = "y" ] ) ; then 
     31        TOP_LN_RSTR=.TRUE. 
     32        TOP_NN_RSTR=2 
     33        IGCM_debug_Print 1 'WARNING : dangerous option for NEMO pisces too' 
     34        IGCM_debug_Print 1 'Reproducibility_after_Restart forced : ' ${opa9_UserChoices_Reproducibility_after_restart} 
     35 
     36    elif ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_MBG_Restart}" = "n" ] ) ; then 
    2937 
    3038        #echo "NO RESTART FOR TOP" 

  • CONFIG/UNIFORM/v6/IPSLCM5A2CHT/EXPERIMENTS/IPSLCM/pdControl/COMP/opa9.card

    r3283 r4873  
    55ORCA_version=${config_UserChoices_ORCA_version:-ORCA2.3} 
    66mesh_mask= n 
     7Reproducibility_after_restart= y 
    78 
    89[InitialStateFiles] 

  • CONFIG/UNIFORM/v6/IPSLCM5A2CHT/EXPERIMENTS/IPSLCM/piControl/COMP/opa9.card

    r3283 r4873  
    55ORCA_version=${config_UserChoices_ORCA_version:-ORCA2.3} 
    66mesh_mask= n 
     7Reproducibility_after_restart= y 
    78 
    89[InitialStateFiles] 

  • CONFIG/UNIFORM/v6/IPSLCM5A2CHT/EXPERIMENTS/IPSLCMCHT/S_historical/COMP/opa9.card

    r4718 r4873  
    55ORCA_version=${config_UserChoices_ORCA_version:-ORCA2.3} 
    66mesh_mask= n 
     7Reproducibility_after_restart= y 
    78 
    89[InitialStateFiles] 

  • CONFIG/UNIFORM/v6/IPSLCM5A2CHT/EXPERIMENTS/IPSLCMCHT/S_piControl/COMP/opa9.card

    r4715 r4873  
    55ORCA_version=${config_UserChoices_ORCA_version:-ORCA2.3} 
    66mesh_mask= n 
     7Reproducibility_after_restart= y 
    78 
    89[InitialStateFiles] 

  • CONFIG/UNIFORM/v6/IPSLCM5A2CHT/GENERAL/DRIVER/opa9.driver

    r3283 r4873  
    105105    OPA_NSTOCK="${OPA_NITEND}" 
    106106 
     107    ##-- Additionnal Restart Option to force reproducibility ; force kt to kt red in restart file 
     108    ## ${opa9_UserChoices_Reproducibility_after_restart} 
     109     
     110    IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/COMP/opa9.card UserChoices Reproducibility_after_restart 
     111 
    107112    ##-- Restart configuration 
    108     if ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_OCE_Restart}" = "n" ] ) ; then 
     113    if ( [ "${opa9_UserChoices_Reproducibility_after_restart}" = "y" ] ) ; then 
     114        OPA_LRSTAR=.TRUE. 
     115        OPA_NRSTDT=2 
     116        #echo "OPA RESTART" 
     117        IGCM_debug_Print 1 'WARNING : dangerous option for NEMO opa9 pisces lim3' 
     118        IGCM_debug_Print 1 'Reproducibility_after_Restart forced ie kt forced to kt red in restart file : ' ${opa9_UserChoices_Reproducibility_after_restart} 
     119        OPA_NMSH=0 
     120    elif ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_OCE_Restart}" = "n" ] ) ; then 
    109121        OPA_LRSTAR=.FALSE. 
    110122        OPA_NRSTDT=0 
    … …  
    140152    esac 
    141153 
     154    if ( [ "${opa9_UserChoices_Reproducibility_after_restart}" = "y" ] ) ; then 
     155        ##-- choose the right restart file 
     156        NEMO_RESTART_FILE=restartopa.nc 
     157        [ -f restartopa_0000.nc ] && NEMO_RESTART_FILE=restartopa_0000.nc 
     158        ##-- Getting from restart file the last time step of the run at which we want to re-start 
     159        NEMO_KT_FROM_RESTART=$(ncdump -v kt ${NEMO_RESTART_FILE}|grep 'kt ='|awk '{print $3}' ) 
     160 
     161        if ( [ "${CumulPeriod}" -eq 1 ] ) ; then 
     162            ## Force the date in the restart file to be the last day before the begining of the new run 
     163            dateendprevious=$( IGCM_date_AddDaysToGregorianDate ${DateBegin} -1 ) 
     164            IGCM_debug_Print 1 "Previous Date  ${dateendprevious}" 
     165            IGCM_debug_Print 1 "cmd done to modify NEMO restartfile:   ncap2 -s ndastp=${dateendprevious} ${NEMO_RESTART_FILE}  tmp.nc" 
     166            if [ -f restartopa_0000.nc ] ; then 
     167                typeset -Z4 ncpu=0 
     168                while [ $ncpu -lt ${OCE_PROC_MPI} ] ; do 
     169                    ncap2 -s "ndastp=${dateendprevious}" restartopa_${ncpu}.nc  tmp.nc 
     170                    mv tmp.nc restartopa_${ncpu}.nc 
     171                    (( ncpu = ncpu + 1 )) 
     172                done 
     173            else 
     174                ncap2 -s "ndastp=${dateendprevious}" ${NEMO_RESTART_FILE}  tmp.nc 
     175                mv tmp.nc ${NEMO_RESTART_FILE} 
     176            fi 
     177            ##-- Getting from restart file the "new" restart date of run at which we want to re-start 
     178            NEMO_NDASTP_FROM_RESTART=$(ncdump -v ndastp ${NEMO_RESTART_FILE}|grep 'ndastp ='|awk '{print $3}' ) 
     179            IGCM_debug_Print 1 "NEMO_NDASTP (from Restart) for 1st Period       : ${NEMO_NDASTP_FROM_RESTART}" 
     180 
     181        fi 
     182 
     183        (( NEMO_NIT000 = NEMO_KT_FROM_RESTART + 1 )) 
     184        (( NEMO_NITEND = NEMO_KT_FROM_RESTART + OPA_NITEND - OPA_NIT000 + 1 )) 
     185        IGCM_debug_Print 1 "NEMO_NIT000 (from Restart)        : ${NEMO_NIT000}" 
     186        IGCM_debug_Print 1 "NEMO_NITEND (from Restart + ... ) : ${NEMO_NITEND}" 
     187        ##-- We force one restart file at the end of the trunk 
     188        OPA_NSTOCK="${NEMO_NITEND}" 
     189        OPA_NIT000="${NEMO_NIT000}" 
     190        OPA_NITEND="${NEMO_NITEND}" 
     191    fi 
     192 
    142193    typeset -r PRECIS=8 
    143194    NEMO_END=$( echo $( awk "BEGIN { printf \"%0${PRECIS}d\",${OPA_NITEND} }" ) )  

  • CONFIG/UNIFORM/v6/IPSLCM5A2CHT/GENERAL/DRIVER/pisces.driver

    r3283 r4873  
    2626 
    2727    ##-- Restart configuration 
    28     if ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_MBG_Restart}" = "n" ] ) ; then 
     28 
     29    ##-- Restart configuration 
     30    if ( [ "${opa9_UserChoices_Reproducibility_after_restart}" = "y" ] ) ; then 
     31        TOP_LN_RSTR=.TRUE. 
     32        TOP_NN_RSTR=2 
     33        IGCM_debug_Print 1 'WARNING : dangerous option for NEMO pisces too' 
     34        IGCM_debug_Print 1 'Reproducibility_after_Restart forced : ' ${opa9_UserChoices_Reproducibility_after_restart} 
     35 
     36    elif ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_MBG_Restart}" = "n" ] ) ; then 
    2937 
    3038        #echo "NO RESTART FOR TOP" 

  • CONFIG/UNIFORM/v6/diff_configurations.ksh

    r4691 r4873  
    1717ConfigList=`ls |grep ${ConfigFamily} |grep -v out` 
    1818ConfigList=$ConfigList" IPSLCM6 IPSLCM6CHT" 
    19 ConfigList="LMDZOR_v6 IPSLCM6" 
     19ConfigList="IPSLCM5A2CHT IPSLCM5A2" 
    2020verbose=no 
    2121echo All configurations to tests : $ConfigList 
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