Ignore:
Timestamp:
08/24/23 15:03:48 (9 months ago)
Author:
cetlod
Message:

NEMOv6.5 : Update config to switch to NEMOv4.2.1 and PISCES gas

Location:
CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS
Files:
3 added
4 deleted
26 edited

Legend:

Unmodified
Added
Removed

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/core/clim/COMP/opa9.card

    r6142 r6601  
    44[UserChoices] 
    55#============================================================== 
    6 ORCA_version=eORCA1.4 
     6ORCA_version=eORCA1.4.2 
    77mesh_mask=n 
    88OutputLevel=10 
    99forcing=core 
    10 R_FORCING=${R_IN}/OCE/NEMO/FORCINGS/COREIIcorr 
     10R_FORCING=${R_IN}/OCE/NEMO/FORCINGS/COREII 
    1111#============================================================== 
    1212 
    1313[InitialStateFiles] 
    14 List=  (${SUBMIT_DIR}/PARAM/NAMELIST/EMPave_old.dat, EMPave_old.dat) 
     14List=   () 
    1515 
    1616[BoundaryFiles] 
    1717List=  () 
    18  
    1918 
    2019ListNonDel= (${opa9_UserChoices_R_FORCING}/u_10.15JUNE2009_fill.nc            , u_10_CORE2_fill.nc), \ 
    … …  
    2726            (${opa9_UserChoices_R_FORCING}/ncar_precip.15JUNE2009_fill.nc     , ncar_precip_CORE2_fill.nc), \ 
    2827            (${opa9_UserChoices_R_FORCING}/slp.15JUNE2009_fill.nc             , slp_CORE2_fill.nc), \ 
    29             (${opa9_UserChoices_R_FORCING}/weights_coreII_2_eorca1_bilinear.nc, weights_bilinear.nc), \ 
    30             (${opa9_UserChoices_R_FORCING}/weights_coreII_2_eorca1_bicubic.nc , weights_bicubic.nc), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates.nc, coordinates.nc), \ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates_xios.nc, coordinates_xios.nc ), \ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_domain_cfg.nc, domain_cfg.nc ), \ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_maskMFO.nc, maskMFO.nc ), \ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_resto.nc, resto.nc ), \ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_subbasins.nc                        , subbasins.nc    ), \ 
    37             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_bot.nc, mixing_power_bot.nc),\ 
    38             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_pyc.nc, mixing_power_pyc.nc),\ 
    39             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_cri.nc, mixing_power_cri.nc),\ 
    40             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_bot.nc, decay_scale_bot.nc),\ 
    41             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_cri.nc, decay_scale_cri.nc),\ 
    42             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
    43             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     28            (${opa9_UserChoices_R_FORCING}/weights_coreII_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_bilinear.nc), \ 
     29            (${opa9_UserChoices_R_FORCING}/weights_coreII_2_${opa9_UserChoices_ORCA_version}_bicubic.nc , weights_bicubic.nc), \ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_ModifStraits_domain_cfg.nc, domain_cfg.nc ), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_maskMFO.nc, maskMFO.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_resto.nc, resto.nc ), \ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_subbasins.nc, subbasins.nc    ), \ 
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_zdfiwm_forcing.nc, zdfiwm_forcing.nc),\ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_runoff-icb_DaiTrenberth_Depoorter.nc, runoff-icb_DaiTrenberth_Depoorter.nc),\ 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sss_absolute_PHC2_salx_2004_08_03_clim.nc, sss_absolute_salinity.nc), \ 
    4439            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/conservative_temperature_WOA13_decav_Reg1L75_clim.nc, .), \ 
    4540            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/absolute_salinity_WOA13_decav_Reg1L75_clim.nc, .), \ 
    46             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/sss_absolute_PHC2_salx_2004_08_03_clim_eORCA1.nc, sss_absolute_salinity.nc), \ 
    47             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/Goutorbe_ghflux.nc, .),\ 
    48             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/runoff-icb_DaiTrenberth_Depoorter_eORCA1.nc, .),\ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/Lucazeau_ghflux.nc, .),\ 
    4942            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/merged_ESACCI_BIOMER4V1R1_CHL_REG05.nc, .),\ 
    50             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_WOA13d1_2_eorca1_bilinear.nc, .), \ 
    51             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_3D_WOA13d1_2_eorca1_bilinear.nc, .), \ 
    52             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_reg05_2_eorca1_bilinear.nc, .), \ 
    53             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_Goutorbe1_2_eorca1_bilinear.nc, .) 
     43            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_WOA13d1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_WOA13d1_2_bilinear.nc), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_3D_WOA13d1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_WOA13d1_2_bilinear.nc), \ 
     45            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_reg05_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_reg05_2_bilinear.nc), \ 
     46            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_Lucazeau1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_Lucazeau1_2_bilinear.nc) 
    5447 
    5548 
    … …  
    6154        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-oce.xml , field_def_nemo-oce.xml  ), \ 
    6255        (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_${opa9_UserChoices_forcing}_${exptype}_cfg, namelist_cfg), \ 
    63         (${SUBMIT_DIR}/PARAM/XML/context_nemo.xml                   , context_nemo.xml               ), \ 
    64         (${SUBMIT_DIR}/PARAM/XML/iodef.xml                          , iodef.xml               ), \ 
    65         (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-oce.xml              , file_def_nemo-oce.xml   ) 
     56        (${SUBMIT_DIR}/PARAM/XML/context_nemo.xml              , context_nemo.xml               ), \ 
     57        (${SUBMIT_DIR}/PARAM/XML/iodef.xml                     , iodef.xml               ), \ 
     58        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-oce.xml         , file_def_nemo-oce.xml   ) 
    6659 
    6760 
    6861[RestartFiles] 
    69 List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc), \ 
    70         (EMPave.dat,  EMPave.dat, EMPave_old.dat) 
     62List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc) 
    7163 
    7264[OutputText] 
    … …  
    10799        (damping.coeff.nc , ${R_OUT_OCE_O_D}/${PREFIX}_damping.coeff.nc                              , NONE          ),\ 
    108100        (output.abort.nc  , ${R_OUT_OCE_D}/${PREFIX}_output.abort.nc                                 , NONE          ),\ 
    109         (output.init.nc   , ${R_OUT_OCE_O_I}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
     101        (output.init.nc   , ${R_OUT_OCE_O_D}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
    110102 
    111103# Monthly analysis 
    … …  
    125117TimeSeriesVars2D = (zos, tos, sos, mldr10_1, nshfls, rsntds, rsds, friver, hc300, wfo) 
    126118ChunckJob2D = NONE 
    127 TimeSeriesVars3D = (e3t, thetao, so) 
    128 ChunckJob3D = 100Y 
     119TimeSeriesVars3D = (thetao, so) 
     120ChunckJob3D = NONE 
    129121Seasonal=ON 
    130122 
    … …  
    132124Patches = () 
    133125GatherWithInternal = (nav_lon, nav_lat, depthu, time_counter, time_centered, time_centered_bounds) 
    134 TimeSeriesVars2D = (tauuo) 
     126TimeSeriesVars2D = () 
    135127ChunckJob2D = NONE 
    136 TimeSeriesVars3D = (e3u, uocetr_eff) 
    137 ChunckJob3D = 100Y 
     128TimeSeriesVars3D = () 
     129ChunckJob3D = NONE 
    138130Seasonal=ON 
    139131 
    … …  
    141133Patches = () 
    142134GatherWithInternal = (nav_lon, nav_lat, depthv, time_counter, time_centered, time_centered_bounds) 
    143 TimeSeriesVars2D = (tauvo) 
     135TimeSeriesVars2D = () 
    144136ChunckJob2D = NONE 
    145 TimeSeriesVars3D = (e3v, vocetr_eff) 
    146 ChunckJob3D = 100Y 
     137TimeSeriesVars3D = () 
     138ChunckJob3D = NONE 
    147139Seasonal=ON 
    148140 
    … …  
    153145ChunckJob2D = NONE 
    154146TimeSeriesVars3D = ( ) 
    155 ChunckJob3D = 100Y 
     147ChunckJob3D = NONE 
    156148Seasonal=OFF 
    157149 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/core/clim/COMP/pisces.card

    r6142 r6601  
    44[UserChoices] 
    55pis=y 
     6gas=n 
    67age=n 
    78cfc11=n 
    89cfc12=n 
     10sf6=n 
     11c14=n 
    912PisFreq=1 
     13AnthrGas=n 
    1014Offline_Mode=n 
    11 Co2Anthr=n 
    12 AtmCo2=2.8432e+02 
     15AtmCo2=2.78000e+02 
     16AtmN2o=2.74372e+02 
     17AtmCos=3.22225e+02 
    1318OutputLevel=10 
    1419 
    … …  
    2429            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PO4_WOA2013_r360x180xl75.nc               , data_PO4_nomask.nc ), \ 
    2530            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Si_WOA2013_r360x180xl75.nc                , data_SIL_nomask.nc ), \ 
    26             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_monthly_r360x180xl75.nc        , data_DOC_nomask.nc ), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_annual_r360x180xl75.nc         , data_DOC_nomask.nc ), \ 
    2732            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Fer_FEMIP_model_median_r360x180xl75.nc    , data_FER_nomask.nc ), \ 
    2833            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/NO3_WOA2013_r360x180xl75.nc               , data_NO3_nomask.nc ), \ 
    29             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_eorca1_bilinear.nc    , weights_3D_r360x180_bilin.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/DUST_INCA_LOI6012-histAER_1M_1850.nc, dust.orca.nc       ), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/weights_LMD144142_eORCA1_bilinear.nc , weights_lmd144142_bilin.nc ), \ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/weights_CMIP_NCAR-CCMI_eORCA1_bilinear.nc, weights_2d_bilin.nc), \ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/Ndep_input4MIPs_surfaceFluxes_CMIP_NCAR-CCMI-2-0_gn_185001-185012-clim.nc, ndeposition.orca.nc), \ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${ORCAGRID}_pmarge_etopo.nc                    , bathy.orca.nc      ), \ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${ORCAGRID}_river_global_news.nc               , river.orca.nc      ), \ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${ORCAGRID}_par_fraction_gewex_clim90s00s.nc   , par.orca.nc        ), \ 
    37             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${ORCAGRID}_Solubility_T62_Mahowald.nc         , solubility.orca.nc ), \ 
    38             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CFCs_CDIAC.dat                      , CFCs_CDIAC.dat     ), \ 
    39             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CO2_OMIP6_1600_2014.txt             , atcco2.txt         ) 
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/N2O_PISCES_annual_r360x180xl75.nc         , data_N2O_nomask.nc ), \ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DMS_PISCES_annual_r360x180xl75.nc         , data_DMS_nomask.nc ), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ISP_PISCES_annual_r360x180xl75.nc         , data_ISP_nomask.nc ), \ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/CO_PISCES_annual_r360x180xl75.nc          , data_CO_nomask.nc  ), \ 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/COS_PISCES_annual_r360x180xl75.nc         , data_COS_nomask.nc ), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_r360x180_bilin.nc ), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_2D_r360x180_bilin.nc ), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_pmarge_etopo.nc                    , pmarge.orca.nc      ), \ 
     42            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
     43            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ), \ 
     45            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc) 
    4046 
    4147 
    4248[ParametersFiles] 
    43 List=   (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_top_ref            , namelist_top_ref), \ 
    44         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_pisces_ref         , namelist_pisces_ref), \ 
    45         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_trc_ref            , namelist_trc_ref   ), \ 
    46         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml  ), \ 
    47         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml), \ 
    48         (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_top_cfg      , namelist_top_cfg           ), \ 
    49         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                , namelist_pisces_cfg        ), \ 
    50         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                   , namelist_trc_cfg           ), \ 
    51         (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                   , file_def_nemo-top.xml   ) 
     49List=   (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_top_ref            , namelist_top_ref             ), \ 
     50        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_pisces_ref         , namelist_pisces_ref          ), \ 
     51        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_trc_ref            , namelist_trc_ref             ), \ 
     52        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml    ), \ 
     53        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml ), \ 
     54        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_cfg                                   , namelist_top_p4z_cfg         ), \ 
     55        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_gas_cfg                               , namelist_top_p4z_gas_cfg     ), \ 
     56        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                                    , namelist_pisces_cfg          ), \ 
     57        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                                       , namelist_trc_cfg             ), \ 
     58        (${SUBMIT_DIR}/PARAM/NAMELIST/CFCs_CDIAC.dat                                         , CFCs_CDIAC.dat               ), \ 
     59        (${SUBMIT_DIR}/PARAM/NAMELIST/atmc14.dat                                             , atmc14.dat                   ), \ 
     60        (${SUBMIT_DIR}/PARAM/NAMELIST/splco2.dat                                             , splco2.dat                   ), \ 
     61        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                                       , file_def_nemo-top.xml        ), \ 
     62        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_co2_yearly_2022.txt  , atmco2.txt                   ), \ 
     63        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_n2o_yearly_2022.txt  , atmn2o.txt                   ), \ 
     64        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_cos_yearly_2022.txt  , atmcos.txt                   ) 
    5265 
    5366 
    … …  
    6578        (${config_UserChoices_JobName}_1y_CFC11.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC11.nc     , NONE ) , \ 
    6679        (${config_UserChoices_JobName}_1y_CFC12.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC12.nc     , NONE ) , \ 
     80        (${config_UserChoices_JobName}_1y_SF6.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_SF6.nc       , NONE ) , \ 
     81        (${config_UserChoices_JobName}_1y_C14.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_C14.nc       , NONE ) , \ 
     82        (${config_UserChoices_JobName}_1y_gas.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_gas.nc       , NONE ) , \ 
    6783        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    6884        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , NONE   ) , \ 
    6985        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , NONE   ) , \ 
     86        (${config_UserChoices_JobName}_1m_gas.nc           , ${R_OUT_MBG_O_M}/${PREFIX}_1M_gas.nc       , NONE   ) , \ 
    7087        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    7188 
    72  
    73 [Post_1D_bioscalar] 
    74 Patches = () 
    75 GatherWithInternal = (time_counter, time_instant, time_instant_bounds) 
    76 TimeSeriesVars2D = (pno3tot, ppo4tot, psiltot, palktot, pfertot, tcflx, tcflxcum, tcexp, tintpp, tnfix, tdenit) 
    77 ChunckJob2D = NONE 
    78 TimeSeriesVars3D = () 
    79 ChunckJob3D = NONE 
    80 Seasonal=OFF 
    8189 
    8290[Post_1M_bioscalar] 
    … …  
    93101GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    94102TimeSeriesVars2D = () 
    95 ChunckJob2D = 50Y 
    96 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si) 
    97 ChunckJob3D = 50Y 
     103ChunckJob2D = NONE 
     104TimeSeriesVars3D = () 
     105ChunckJob3D = NONE 
    98106Seasonal=OFF 
    99107 
    … …  
    101109Patches = () 
    102110GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    103 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) 
    104 ChunckJob2D = 50Y 
    105 TimeSeriesVars3D = (TPP) 
    106 ChunckJob3D = 50Y 
    107 Seasonal=OFF 
    108  
    109 [Post_1Y_ptrc_T] 
    110 Patches = () 
    111 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    112 TimeSeriesVars2D = () 
    113 ChunckJob2D = OFF 
    114 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si ) 
     111TimeSeriesVars2D = (Cflx, Dpco2) 
     112ChunckJob2D = 100Y 
     113TimeSeriesVars3D = () 
    115114ChunckJob3D = NONE 
    116115Seasonal=OFF 
    117116 
    118 [Post_1Y_diad_T] 
     117[Post_1M_gas] 
    119118Patches = () 
    120119GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    121 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup,  Nfix) 
    122 ChunckJob2D = 50Y 
    123 TimeSeriesVars3D = (PAR, TPP) 
    124 ChunckJob3D = 50Y 
    125 Seasonal=OFF 
    126  
    127 [Post_1Y_inerttrc] 
    128 Patches = () 
    129 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    130 TimeSeriesVars2D = () 
    131 ChunckJob2D = OFF 
    132 TimeSeriesVars3D = (Age) 
     120TimeSeriesVars2D = (N2Oflx, Dpn2o, DMSflx, COSflx, COflx, ISPflx) 
     121ChunckJob2D = 100Y 
     122TimeSeriesVars3D = () 
    133123ChunckJob3D = NONE 
    134124Seasonal=OFF 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/core/clim/config.card

    r5535 r6601  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 586MPI) 
     58OCE= (opa_online_${OptMode}.exe, nemo, 557MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/core/ia/COMP/opa9.card

    r6142 r6601  
    44[UserChoices] 
    55#============================================================== 
    6 ORCA_version=eORCA1.4 
     6ORCA_version=eORCA1.4.2 
    77mesh_mask=n 
    88OutputLevel=10 
    … …  
    1515 
    1616[InitialStateFiles] 
    17 List=   (${SUBMIT_DIR}/PARAM/NAMELIST/EMPave_old.dat, EMPave_old.dat) 
     17List=   () 
    1818 
    1919[BoundaryFiles] 
    … …  
    2121 
    2222 
    23 ListNonDel= (${opa9_UserChoices_R_FORCING}/weights_coreII_2_eorca1_bilinear.nc, weights_bilinear.nc), \ 
    24             (${opa9_UserChoices_R_FORCING}/weights_coreII_2_eorca1_bicubic.nc , weights_bicubic.nc), \ 
    25             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates.nc, coordinates.nc), \ 
    26             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates_xios.nc, coordinates_xios.nc ), \ 
    27             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_domain_cfg.nc, domain_cfg.nc ), \ 
    28             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_maskMFO.nc, maskMFO.nc ), \ 
    29             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_resto.nc, resto.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_subbasins.nc                        , subbasins.nc    ), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_bot.nc, mixing_power_bot.nc),\ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_pyc.nc, mixing_power_pyc.nc),\ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_cri.nc, mixing_power_cri.nc),\ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_bot.nc, decay_scale_bot.nc),\ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_cri.nc, decay_scale_cri.nc),\ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
    37             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     23ListNonDel= (${opa9_UserChoices_R_FORCING}/weights_coreII_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_bilinear.nc), \ 
     24            (${opa9_UserChoices_R_FORCING}/weights_coreII_2_${opa9_UserChoices_ORCA_version}_bicubic.nc , weights_bicubic.nc), \ 
     25            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_ModifStraits_domain_cfg.nc, domain_cfg.nc ), \ 
     26            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_maskMFO.nc, maskMFO.nc ), \ 
     27            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_resto.nc, resto.nc ), \ 
     28            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_subbasins.nc, subbasins.nc    ), \ 
     29            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_zdfiwm_forcing.nc, zdfiwm_forcing.nc),\ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_runoff-icb_DaiTrenberth_Depoorter.nc, runoff-icb_DaiTrenberth_Depoorter.nc),\ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sss_absolute_PHC2_salx_2004_08_03_clim.nc, sss_absolute_salinity.nc), \ 
    3834            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/conservative_temperature_WOA13_decav_Reg1L75_clim.nc, .), \ 
    3935            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/absolute_salinity_WOA13_decav_Reg1L75_clim.nc, .), \ 
    40             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/sss_absolute_PHC2_salx_2004_08_03_clim_eORCA1.nc, sss_absolute_salinity.nc), \ 
    41             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/Goutorbe_ghflux.nc, .),\ 
    42             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/runoff-icb_DaiTrenberth_Depoorter_eORCA1.nc, .),\ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/Lucazeau_ghflux.nc, .),\ 
    4337            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/merged_ESACCI_BIOMER4V1R1_CHL_REG05.nc, .),\ 
    44             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_WOA13d1_2_eorca1_bilinear.nc, .), \ 
    45             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_3D_WOA13d1_2_eorca1_bilinear.nc, .), \ 
    46             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_reg05_2_eorca1_bilinear.nc, .), \ 
    47             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_Goutorbe1_2_eorca1_bilinear.nc, .) 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_WOA13d1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_WOA13d1_2_bilinear.nc), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_3D_WOA13d1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_WOA13d1_2_bilinear.nc), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_reg05_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_reg05_2_bilinear.nc), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_Lucazeau1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_Lucazeau1_2_bilinear.nc) 
    4842 
    4943 
    … …  
    6155 
    6256[RestartFiles] 
    63 List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc), \ 
    64         (EMPave.dat,  EMPave.dat, EMPave_old.dat) 
     57List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc) 
    6558 
    6659[OutputText] 
    … …  
    10194        (damping.coeff.nc , ${R_OUT_OCE_O_D}/${PREFIX}_damping.coeff.nc                              , NONE          ),\ 
    10295        (output.abort.nc  , ${R_OUT_OCE_D}/${PREFIX}_output.abort.nc                                 , NONE          ),\ 
    103         (output.init.nc   , ${R_OUT_OCE_O_I}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
     96        (output.init.nc   , ${R_OUT_OCE_O_D}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
    10497 
    10598# Monthly analysis 
    … …  
    119112TimeSeriesVars2D = (zos, tos, sos, mldr10_1, nshfls, rsntds, rsds, friver, hc300, wfo) 
    120113ChunckJob2D = NONE 
    121 TimeSeriesVars3D = (e3t, thetao, so) 
    122 ChunckJob3D = 100Y 
     114TimeSeriesVars3D = (thetao, so) 
     115ChunckJob3D = NONE 
    123116Seasonal=ON 
    124117 
    … …  
    126119Patches = () 
    127120GatherWithInternal = (nav_lon, nav_lat, depthu, time_counter, time_centered, time_centered_bounds) 
    128 TimeSeriesVars2D = (tauuo) 
     121TimeSeriesVars2D = () 
    129122ChunckJob2D = NONE 
    130 TimeSeriesVars3D = (e3u, uocetr_eff) 
    131 ChunckJob3D = 100Y 
     123TimeSeriesVars3D = () 
     124ChunckJob3D = NONE 
    132125Seasonal=ON 
    133126 
    … …  
    135128Patches = () 
    136129GatherWithInternal = (nav_lon, nav_lat, depthv, time_counter, time_centered, time_centered_bounds) 
    137 TimeSeriesVars2D = (tauvo) 
     130TimeSeriesVars2D = () 
    138131ChunckJob2D = NONE 
    139 TimeSeriesVars3D = (e3v, vocetr_eff) 
    140 ChunckJob3D = 100Y 
     132TimeSeriesVars3D = () 
     133ChunckJob3D = NONE 
    141134Seasonal=ON 
    142135 
    … …  
    147140ChunckJob2D = NONE 
    148141TimeSeriesVars3D = ( ) 
    149 ChunckJob3D = 100Y 
     142ChunckJob3D = NONE 
    150143Seasonal=OFF 
    151144 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/core/ia/COMP/pisces.card

    r6142 r6601  
    44[UserChoices] 
    55pis=y 
     6gas=n 
    67age=n 
    78cfc11=n 
    89cfc12=n 
     10sf6=n 
     11c14=n 
    912PisFreq=1 
    1013Offline_Mode=n 
    11 Co2Anthr=n 
    12 AtmCo2=2.8432e+02 
     14AnthrGas=n 
     15AtmCo2=2.78000e+02 
     16AtmN2o=2.74372e+02 
     17AtmCos=3.22225e+02 
    1318OutputLevel=10 
    1419 
    … …  
    1722 
    1823[BoundaryFiles] 
    19 List=       (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/DUST_INCA_LOI6012-histAER_1M_${year}.nc, dust.orca.nc       ), \ 
    20             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/Ndep_input4MIPs_surfaceFluxes_CMIP_NCAR-CCMI-2-0_gn_${year}01-${year}12-clim.nc , ndeposition.orca.nc ) 
     24List=       () 
    2125 
    2226ListNonDel= (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PiDIC_GLODAPv2_Lauvset2016_r360x180xl75.nc, data_DIC_nomask.nc ), \ 
    … …  
    2529            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PO4_WOA2013_r360x180xl75.nc               , data_PO4_nomask.nc ), \ 
    2630            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Si_WOA2013_r360x180xl75.nc                , data_SIL_nomask.nc ), \ 
    27             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_monthly_r360x180xl75.nc        , data_DOC_nomask.nc ), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_annual_r360x180xl75.nc         , data_DOC_nomask.nc ), \ 
    2832            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Fer_FEMIP_model_median_r360x180xl75.nc    , data_FER_nomask.nc ), \ 
    2933            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/NO3_WOA2013_r360x180xl75.nc               , data_NO3_nomask.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_eorca1_bilinear.nc    , weights_3D_r360x180_bilin.nc ), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/weights_LMD144142_eORCA1_bilinear.nc , weights_lmd144142_bilin.nc ), \ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/weights_CMIP_NCAR-CCMI_eORCA1_bilinear.nc, weights_2d_bilin.nc), \ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${ORCAGRID}_pmarge_etopo.nc                    , bathy.orca.nc      ), \ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${ORCAGRID}_river_global_news.nc               , river.orca.nc      ), \ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${ORCAGRID}_par_fraction_gewex_clim90s00s.nc   , par.orca.nc        ), \ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${ORCAGRID}_Solubility_T62_Mahowald.nc         , solubility.orca.nc ), \ 
    37             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CFCs_CDIAC.dat                      , CFCs_CDIAC.dat     ), \ 
    38             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CO2_OMIP6_1600_2014.txt             , atcco2.txt         ) 
    39  
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/N2O_PISCES_annual_r360x180xl75.nc         , data_N2O_nomask.nc ), \ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DMS_PISCES_annual_r360x180xl75.nc         , data_DMS_nomask.nc ), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ISP_PISCES_annual_r360x180xl75.nc         , data_ISP_nomask.nc ), \ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/CO_PISCES_annual_r360x180xl75.nc          , data_CO_nomask.nc  ), \ 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/COS_PISCES_annual_r360x180xl75.nc         , data_COS_nomask.nc ), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_r360x180_bilin.nc ), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_2D_r360x180_bilin.nc ), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_pmarge_etopo.nc                    , pmarge.orca.nc      ), \ 
     42            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
     43            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
     45            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4046 
    4147[ParametersFiles] 
    42 List=   (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_top_ref            , namelist_top_ref), \ 
    43         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_pisces_ref         , namelist_pisces_ref), \ 
    44         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_trc_ref            , namelist_trc_ref   ), \ 
    45         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml  ), \ 
    46         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml), \ 
    47         (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_top_cfg      , namelist_top_cfg           ), \ 
    48         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                , namelist_pisces_cfg        ), \ 
    49         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                   , namelist_trc_cfg           ), \ 
    50         (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                   , file_def_nemo-top.xml   ) 
     48List=   (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_top_ref            , namelist_top_ref             ), \ 
     49        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_pisces_ref         , namelist_pisces_ref          ), \ 
     50        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_trc_ref            , namelist_trc_ref             ), \ 
     51        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml    ), \ 
     52        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml ), \ 
     53        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_cfg                                   , namelist_top_p4z_cfg         ), \ 
     54        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_gas_cfg                               , namelist_top_p4z_gas_cfg     ), \ 
     55        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                                    , namelist_pisces_cfg          ), \ 
     56        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                                       , namelist_trc_cfg             ), \ 
     57        (${SUBMIT_DIR}/PARAM/NAMELIST/CFCs_CDIAC.dat                                         , CFCs_CDIAC.dat               ), \ 
     58        (${SUBMIT_DIR}/PARAM/NAMELIST/atmc14.dat                                             , atmc14.dat                   ), \ 
     59        (${SUBMIT_DIR}/PARAM/NAMELIST/splco2.dat                                             , splco2.dat                   ), \ 
     60        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                                       , file_def_nemo-top.xml        ), \ 
     61        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_co2_yearly_2022.txt  , atmco2.txt                   ), \ 
     62        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_n2o_yearly_2022.txt  , atmn2o.txt                   ), \ 
     63        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_cos_yearly_2022.txt  , atmcos.txt                   ) 
    5164 
    5265 
    … …  
    6477        (${config_UserChoices_JobName}_1y_CFC11.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC11.nc     , NONE ) , \ 
    6578        (${config_UserChoices_JobName}_1y_CFC12.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC12.nc     , NONE ) , \ 
     79        (${config_UserChoices_JobName}_1y_SF6.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_SF6.nc       , NONE ) , \ 
     80        (${config_UserChoices_JobName}_1y_C14.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_C14.nc       , NONE ) , \ 
     81        (${config_UserChoices_JobName}_1y_gas.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_gas.nc       , NONE ) , \ 
    6682        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    6783        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , NONE   ) , \ 
    6884        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , NONE   ) , \ 
     85        (${config_UserChoices_JobName}_1m_gas.nc           , ${R_OUT_MBG_O_M}/${PREFIX}_1M_gas.nc       , NONE   ) , \ 
    6986        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    7087 
    71  
    72 [Post_1D_bioscalar] 
    73 Patches = () 
    74 GatherWithInternal = (time_counter, time_instant, time_instant_bounds) 
    75 TimeSeriesVars2D = (pno3tot, ppo4tot, psiltot, palktot, pfertot, tcflx, tcflxcum, tcexp, tintpp, tnfix, tdenit) 
    76 ChunckJob2D = NONE 
    77 TimeSeriesVars3D = () 
    78 ChunckJob3D = NONE 
    79 Seasonal=OFF 
    8088 
    8189[Post_1M_bioscalar] 
    … …  
    92100GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    93101TimeSeriesVars2D = () 
    94 ChunckJob2D = 50Y 
    95 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si) 
    96 ChunckJob3D = 50Y 
     102ChunckJob2D = NONE 
     103TimeSeriesVars3D = () 
     104ChunckJob3D = NONE 
    97105Seasonal=OFF 
    98106 
    … …  
    100108Patches = () 
    101109GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    102 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) 
    103 ChunckJob2D = 50Y 
    104 TimeSeriesVars3D = (TPP) 
    105 ChunckJob3D = 50Y 
    106 Seasonal=OFF 
    107  
    108 [Post_1Y_ptrc_T] 
    109 Patches = () 
    110 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    111 TimeSeriesVars2D = () 
    112 ChunckJob2D = OFF 
    113 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si ) 
     110TimeSeriesVars2D = (Cflx, Dpco2) 
     111ChunckJob2D = 100Y 
     112TimeSeriesVars3D = () 
    114113ChunckJob3D = NONE 
    115114Seasonal=OFF 
    116115 
    117 [Post_1Y_diad_T] 
     116[Post_1M_gas] 
    118117Patches = () 
    119118GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    120 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup,  Nfix) 
    121 ChunckJob2D = 50Y 
    122 TimeSeriesVars3D = (PAR, TPP) 
    123 ChunckJob3D = 50Y 
    124 Seasonal=OFF 
    125  
    126 [Post_1Y_inerttrc] 
    127 Patches = () 
    128 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    129 TimeSeriesVars2D = () 
    130 ChunckJob2D = OFF 
    131 TimeSeriesVars3D = (Age) 
     119TimeSeriesVars2D = (N2Oflx, Dpn2o, DMSflx, COSflx, COflx, ISPflx) 
     120ChunckJob2D = 100Y 
     121TimeSeriesVars3D = () 
    132122ChunckJob3D = NONE 
    133123Seasonal=OFF 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/core/ia/config.card

    r5535 r6601  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 586MPI) 
     58OCE= (opa_online_${OptMode}.exe, nemo, 557MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/jra/ia/COMP/opa9.card

    r6142 r6601  
    44[UserChoices] 
    55#============================================================== 
    6 ORCA_version=eORCA1.4 
     6ORCA_version=eORCA1.4.2 
    77mesh_mask=n 
    88OutputLevel=10 
    … …  
    1515 
    1616[InitialStateFiles] 
    17 List=   (${SUBMIT_DIR}/PARAM/NAMELIST/EMPave_old.dat, EMPave_old.dat) 
     17List=   () 
    1818 
    1919[BoundaryFiles] 
    … …  
    2121 
    2222 
    23 ListNonDel= (${opa9_UserChoices_R_FORCING}/weights_JRA55_eORCA1_bilinear.nc, weights_bilinear.nc), \ 
    24             (${opa9_UserChoices_R_FORCING}/weights_JRA55_eORCA1_bicubic.nc , weights_bicubic.nc), \ 
    25             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates.nc, coordinates.nc), \ 
    26             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates_xios.nc, coordinates_xios.nc ), \ 
    27             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_domain_cfg.nc, domain_cfg.nc ), \ 
    28             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_maskMFO.nc, maskMFO.nc ), \ 
    29             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_resto.nc, resto.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_subbasins.nc                        , subbasins.nc    ), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_bot.nc, mixing_power_bot.nc),\ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_pyc.nc, mixing_power_pyc.nc),\ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_cri.nc, mixing_power_cri.nc),\ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_bot.nc, decay_scale_bot.nc),\ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_cri.nc, decay_scale_cri.nc),\ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
    37             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     23ListNonDel= (${opa9_UserChoices_R_FORCING}/weights_JRA55_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_bilinear.nc), \ 
     24            (${opa9_UserChoices_R_FORCING}/weights_JRA55_${opa9_UserChoices_ORCA_version}_bicubic.nc , weights_bicubic.nc), \ 
     25            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_ModifStraits_domain_cfg.nc, domain_cfg.nc ), \ 
     26            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_maskMFO.nc, maskMFO.nc ), \ 
     27            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_resto.nc, resto.nc ), \ 
     28            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_subbasins.nc, subbasins.nc    ), \ 
     29            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_zdfiwm_forcing.nc, zdfiwm_forcing.nc),\ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_runoff-icb_DaiTrenberth_Depoorter.nc, runoff-icb_DaiTrenberth_Depoorter.nc),\ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sss_absolute_PHC2_salx_2004_08_03_clim.nc, sss_absolute_salinity.nc), \ 
    3834            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/conservative_temperature_WOA13_decav_Reg1L75_clim.nc, .), \ 
    3935            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/absolute_salinity_WOA13_decav_Reg1L75_clim.nc, .), \ 
    40             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/sss_absolute_PHC2_salx_2004_08_03_clim_eORCA1.nc, sss_absolute_salinity.nc), \ 
    41             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/Goutorbe_ghflux.nc, .),\ 
    42             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/runoff-icb_DaiTrenberth_Depoorter_eORCA1.nc, .),\ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/Lucazeau_ghflux.nc, .),\ 
    4337            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/merged_ESACCI_BIOMER4V1R1_CHL_REG05.nc, .),\ 
    44             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_WOA13d1_2_eorca1_bilinear.nc, .), \ 
    45             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_3D_WOA13d1_2_eorca1_bilinear.nc, .), \ 
    46             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_reg05_2_eorca1_bilinear.nc, .), \ 
    47             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_Goutorbe1_2_eorca1_bilinear.nc, .) 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_WOA13d1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_WOA13d1_2_bilinear.nc), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_3D_WOA13d1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_WOA13d1_2_bilinear.nc), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_reg05_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_reg05_2_bilinear.nc), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_Lucazeau1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_Lucazeau1_2_bilinear.nc) 
    4842 
    4943 
    … …  
    5549        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-oce.xml , field_def_nemo-oce.xml  ), \ 
    5650        (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_${opa9_UserChoices_forcing}_${exptype}_cfg, namelist_cfg), \ 
    57         (${SUBMIT_DIR}/PARAM/XML/context_nemo.xml                   , context_nemo.xml               ), \ 
    58         (${SUBMIT_DIR}/PARAM/XML/iodef.xml                          , iodef.xml               ), \ 
    59         (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-oce.xml              , file_def_nemo-oce.xml   ) 
     51        (${SUBMIT_DIR}/PARAM/XML/context_nemo.xml              , context_nemo.xml               ), \ 
     52        (${SUBMIT_DIR}/PARAM/XML/iodef.xml                     , iodef.xml               ), \ 
     53        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-oce.xml         , file_def_nemo-oce.xml   ) 
    6054 
    6155 
    6256[RestartFiles] 
    63 List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc), \ 
    64         (EMPave.dat,  EMPave.dat, EMPave_old.dat) 
     57List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc) 
    6558 
    6659[OutputText] 
    … …  
    10194        (damping.coeff.nc , ${R_OUT_OCE_O_D}/${PREFIX}_damping.coeff.nc                              , NONE          ),\ 
    10295        (output.abort.nc  , ${R_OUT_OCE_D}/${PREFIX}_output.abort.nc                                 , NONE          ),\ 
    103         (output.init.nc   , ${R_OUT_OCE_O_I}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
     96        (output.init.nc   , ${R_OUT_OCE_O_D}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
    10497 
    10598# Monthly analysis 
    … …  
    119112TimeSeriesVars2D = (zos, tos, sos, mldr10_1, nshfls, rsntds, rsds, friver, hc300, wfo) 
    120113ChunckJob2D = NONE 
    121 TimeSeriesVars3D = (e3t, thetao, so) 
    122 ChunckJob3D = 100Y 
     114TimeSeriesVars3D = (thetao, so) 
     115ChunckJob3D = NONE 
    123116Seasonal=ON 
    124117 
    … …  
    126119Patches = () 
    127120GatherWithInternal = (nav_lon, nav_lat, depthu, time_counter, time_centered, time_centered_bounds) 
    128 TimeSeriesVars2D = (tauuo) 
     121TimeSeriesVars2D = () 
    129122ChunckJob2D = NONE 
    130 TimeSeriesVars3D = (e3u, uocetr_eff) 
    131 ChunckJob3D = 100Y 
     123TimeSeriesVars3D = () 
     124ChunckJob3D = NONE 
    132125Seasonal=ON 
    133126 
    … …  
    135128Patches = () 
    136129GatherWithInternal = (nav_lon, nav_lat, depthv, time_counter, time_centered, time_centered_bounds) 
    137 TimeSeriesVars2D = (tauvo) 
     130TimeSeriesVars2D = () 
    138131ChunckJob2D = NONE 
    139 TimeSeriesVars3D = (e3v, vocetr_eff) 
    140 ChunckJob3D = 100Y 
     132TimeSeriesVars3D = () 
     133ChunckJob3D = NONE 
    141134Seasonal=ON 
    142135 
    … …  
    147140ChunckJob2D = NONE 
    148141TimeSeriesVars3D = ( ) 
    149 ChunckJob3D = 100Y 
     142ChunckJob3D = NONE 
    150143Seasonal=OFF 
    151144 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/jra/ia/COMP/pisces.card

    r6142 r6601  
    44[UserChoices] 
    55pis=y 
     6gas=n 
    67age=n 
    78cfc11=n 
    89cfc12=n 
     10sf6=n 
     11c14=n 
    912PisFreq=1 
    1013Offline_Mode=n 
    11 Co2Anthr=n 
    12 AtmCo2=2.8432e+02 
     14AnthrGas=n 
     15AtmCo2=2.78000e+02 
     16AtmN2o=2.74372e+02 
     17AtmCos=3.22225e+02 
    1318OutputLevel=10 
    1419 
    … …  
    1722 
    1823[BoundaryFiles] 
    19 List=       (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/DUST_INCA_LOI6012-histAER_1M_${year}.nc, dust.orca.nc       ), \ 
    20             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/Ndep_input4MIPs_surfaceFluxes_CMIP_NCAR-CCMI-2-0_gn_${year}01-${year}12-clim.nc , ndeposition.orca.nc ) 
     24List=       () 
    2125 
    2226ListNonDel= (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PiDIC_GLODAPv2_Lauvset2016_r360x180xl75.nc, data_DIC_nomask.nc ), \ 
    … …  
    2529            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PO4_WOA2013_r360x180xl75.nc               , data_PO4_nomask.nc ), \ 
    2630            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Si_WOA2013_r360x180xl75.nc                , data_SIL_nomask.nc ), \ 
    27             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_monthly_r360x180xl75.nc        , data_DOC_nomask.nc ), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_annual_r360x180xl75.nc         , data_DOC_nomask.nc ), \ 
    2832            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Fer_FEMIP_model_median_r360x180xl75.nc    , data_FER_nomask.nc ), \ 
    2933            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/NO3_WOA2013_r360x180xl75.nc               , data_NO3_nomask.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_eorca1_bilinear.nc    , weights_3D_r360x180_bilin.nc ), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/weights_LMD144142_eORCA1_bilinear.nc , weights_lmd144142_bilin.nc ), \ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/weights_CMIP_NCAR-CCMI_eORCA1_bilinear.nc, weights_2d_bilin.nc), \ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${ORCAGRID}_pmarge_etopo.nc                    , bathy.orca.nc      ), \ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${ORCAGRID}_river_global_news.nc               , river.orca.nc      ), \ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${ORCAGRID}_par_fraction_gewex_clim90s00s.nc   , par.orca.nc        ), \ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${ORCAGRID}_Solubility_T62_Mahowald.nc         , solubility.orca.nc ), \ 
    37             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CFCs_CDIAC.dat                      , CFCs_CDIAC.dat     ), \ 
    38             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CO2_OMIP6_1600_2014.txt             , atcco2.txt         ) 
    39  
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/N2O_PISCES_annual_r360x180xl75.nc         , data_N2O_nomask.nc ), \ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DMS_PISCES_annual_r360x180xl75.nc         , data_DMS_nomask.nc ), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ISP_PISCES_annual_r360x180xl75.nc         , data_ISP_nomask.nc ), \ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/CO_PISCES_annual_r360x180xl75.nc          , data_CO_nomask.nc  ), \ 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/COS_PISCES_annual_r360x180xl75.nc         , data_COS_nomask.nc ), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_r360x180_bilin.nc ), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_2D_r360x180_bilin.nc ), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_pmarge_etopo.nc                    , pmarge.orca.nc      ), \ 
     42            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
     43            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ), \ 
     45            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc) 
    4046 
    4147[ParametersFiles] 
    42 List=   (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_top_ref            , namelist_top_ref), \ 
    43         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_pisces_ref         , namelist_pisces_ref), \ 
    44         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_trc_ref            , namelist_trc_ref   ), \ 
    45         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml  ), \ 
    46         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml), \ 
    47         (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_top_cfg      , namelist_top_cfg           ), \ 
    48         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                , namelist_pisces_cfg        ), \ 
    49         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                   , namelist_trc_cfg           ), \ 
    50         (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                   , file_def_nemo-top.xml   ) 
     48List=   (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_top_ref            , namelist_top_ref             ), \ 
     49        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_pisces_ref         , namelist_pisces_ref          ), \ 
     50        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_trc_ref            , namelist_trc_ref             ), \ 
     51        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml    ), \ 
     52        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml ), \ 
     53        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_cfg                                   , namelist_top_p4z_cfg         ), \ 
     54        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_gas_cfg                               , namelist_top_p4z_gas_cfg     ), \ 
     55        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                                    , namelist_pisces_cfg          ), \ 
     56        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                                       , namelist_trc_cfg             ), \ 
     57        (${SUBMIT_DIR}/PARAM/NAMELIST/CFCs_CDIAC.dat                                         , CFCs_CDIAC.dat               ), \ 
     58        (${SUBMIT_DIR}/PARAM/NAMELIST/atmc14.dat                                             , atmc14.dat                   ), \ 
     59        (${SUBMIT_DIR}/PARAM/NAMELIST/splco2.dat                                             , splco2.dat                   ), \ 
     60        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                                       , file_def_nemo-top.xml        ), \ 
     61        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_co2_yearly_2022.txt  , atmco2.txt                   ), \ 
     62        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_n2o_yearly_2022.txt  , atmn2o.txt                   ), \ 
     63        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_cos_yearly_2022.txt  , atmcos.txt                   ) 
    5164 
    5265 
    … …  
    6477        (${config_UserChoices_JobName}_1y_CFC11.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC11.nc     , NONE ) , \ 
    6578        (${config_UserChoices_JobName}_1y_CFC12.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC12.nc     , NONE ) , \ 
     79        (${config_UserChoices_JobName}_1y_SF6.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_SF6.nc       , NONE ) , \ 
     80        (${config_UserChoices_JobName}_1y_C14.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_C14.nc       , NONE ) , \ 
     81        (${config_UserChoices_JobName}_1y_gas.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_gas.nc       , NONE ) , \ 
    6682        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    6783        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , NONE   ) , \ 
    6884        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , NONE   ) , \ 
     85        (${config_UserChoices_JobName}_1m_gas.nc           , ${R_OUT_MBG_O_M}/${PREFIX}_1M_gas.nc       , NONE   ) , \ 
    6986        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    7087 
    71  
    72 [Post_1D_bioscalar] 
    73 Patches = () 
    74 GatherWithInternal = (time_counter, time_instant, time_instant_bounds) 
    75 TimeSeriesVars2D = (pno3tot, ppo4tot, psiltot, palktot, pfertot, tcflx, tcflxcum, tcexp, tintpp, tnfix, tdenit) 
    76 ChunckJob2D = NONE 
    77 TimeSeriesVars3D = () 
    78 ChunckJob3D = NONE 
    79 Seasonal=OFF 
    8088 
    8189[Post_1M_bioscalar] 
    … …  
    92100GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    93101TimeSeriesVars2D = () 
    94 ChunckJob2D = 50Y 
    95 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si) 
    96 ChunckJob3D = 50Y 
     102ChunckJob2D = NONE 
     103TimeSeriesVars3D = () 
     104ChunckJob3D = NONE 
    97105Seasonal=OFF 
    98106 
    … …  
    100108Patches = () 
    101109GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    102 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) 
    103 ChunckJob2D = 50Y 
    104 TimeSeriesVars3D = (TPP) 
    105 ChunckJob3D = 50Y 
    106 Seasonal=OFF 
    107  
    108 [Post_1Y_ptrc_T] 
    109 Patches = () 
    110 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    111 TimeSeriesVars2D = () 
    112 ChunckJob2D = OFF 
    113 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si ) 
     110TimeSeriesVars2D = (Cflx, Dpco2) 
     111ChunckJob2D = 100Y 
     112TimeSeriesVars3D = () 
    114113ChunckJob3D = NONE 
    115114Seasonal=OFF 
    116115 
    117 [Post_1Y_diad_T] 
     116[Post_1M_gas] 
    118117Patches = () 
    119118GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    120 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup,  Nfix) 
    121 ChunckJob2D = 50Y 
    122 TimeSeriesVars3D = (PAR, TPP) 
    123 ChunckJob3D = 50Y 
    124 Seasonal=OFF 
    125  
    126 [Post_1Y_inerttrc] 
    127 Patches = () 
    128 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    129 TimeSeriesVars2D = () 
    130 ChunckJob2D = OFF 
    131 TimeSeriesVars3D = (Age) 
     119TimeSeriesVars2D = (N2Oflx, Dpn2o, DMSflx, COSflx, COflx, ISPflx) 
     120ChunckJob2D = 100Y 
     121TimeSeriesVars3D = () 
    132122ChunckJob3D = NONE 
    133123Seasonal=OFF 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/jra/ia/config.card

    r5535 r6601  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 586MPI) 
     58OCE= (opa_online_${OptMode}.exe, nemo, 557MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_TRC/core/clim/COMP/opa9.card

    r6142 r6601  
    44[UserChoices] 
    55#============================================================== 
    6 ORCA_version=eORCA1.4 
     6ORCA_version=eORCA1.4.2 
    77mesh_mask=n 
    88OutputLevel=10 
    … …  
    1212 
    1313[InitialStateFiles] 
    14 List=  (${SUBMIT_DIR}/PARAM/NAMELIST/EMPave_old.dat, EMPave_old.dat) 
     14List=   () 
    1515 
    1616[BoundaryFiles] 
    1717List=  () 
    18  
    1918 
    2019ListNonDel= (${opa9_UserChoices_R_FORCING}/u_10.15JUNE2009_fill.nc            , u_10_CORE2_fill.nc), \ 
    … …  
    2726            (${opa9_UserChoices_R_FORCING}/ncar_precip.15JUNE2009_fill.nc     , ncar_precip_CORE2_fill.nc), \ 
    2827            (${opa9_UserChoices_R_FORCING}/slp.15JUNE2009_fill.nc             , slp_CORE2_fill.nc), \ 
    29             (${opa9_UserChoices_R_FORCING}/weights_coreII_2_eorca1_bilinear.nc, weights_bilinear.nc), \ 
    30             (${opa9_UserChoices_R_FORCING}/weights_coreII_2_eorca1_bicubic.nc , weights_bicubic.nc), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates.nc, coordinates.nc), \ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates_xios.nc, coordinates_xios.nc ), \ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_domain_cfg.nc, domain_cfg.nc ), \ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_maskMFO.nc, maskMFO.nc ), \ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_resto.nc, resto.nc ), \ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_subbasins.nc                        , subbasins.nc    ), \ 
    37             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_bot.nc, mixing_power_bot.nc),\ 
    38             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_pyc.nc, mixing_power_pyc.nc),\ 
    39             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_cri.nc, mixing_power_cri.nc),\ 
    40             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_bot.nc, decay_scale_bot.nc),\ 
    41             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_cri.nc, decay_scale_cri.nc),\ 
    42             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
    43             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     28            (${opa9_UserChoices_R_FORCING}/weights_coreII_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_bilinear.nc), \ 
     29            (${opa9_UserChoices_R_FORCING}/weights_coreII_2_${opa9_UserChoices_ORCA_version}_bicubic.nc , weights_bicubic.nc), \ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_ModifStraits_domain_cfg.nc, domain_cfg.nc ), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_maskMFO.nc, maskMFO.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_resto.nc, resto.nc ), \ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_subbasins.nc, subbasins.nc    ), \ 
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_zdfiwm_forcing.nc, zdfiwm_forcing.nc),\ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_runoff-icb_DaiTrenberth_Depoorter.nc, runoff-icb_DaiTrenberth_Depoorter.nc),\ 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sss_absolute_PHC2_salx_2004_08_03_clim.nc, sss_absolute_salinity.nc), \ 
    4439            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/conservative_temperature_WOA13_decav_Reg1L75_clim.nc, .), \ 
    4540            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/absolute_salinity_WOA13_decav_Reg1L75_clim.nc, .), \ 
    46             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/sss_absolute_PHC2_salx_2004_08_03_clim_eORCA1.nc, sss_absolute_salinity.nc), \ 
    47             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/Goutorbe_ghflux.nc, .),\ 
    48             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/runoff-icb_DaiTrenberth_Depoorter_eORCA1.nc, .),\ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/Lucazeau_ghflux.nc, .),\ 
    4942            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/merged_ESACCI_BIOMER4V1R1_CHL_REG05.nc, .),\ 
    50             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_WOA13d1_2_eorca1_bilinear.nc, .), \ 
    51             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_3D_WOA13d1_2_eorca1_bilinear.nc, .), \ 
    52             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_reg05_2_eorca1_bilinear.nc, .), \ 
    53             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_Goutorbe1_2_eorca1_bilinear.nc, .) 
     43            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_WOA13d1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_WOA13d1_2_bilinear.nc), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_3D_WOA13d1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_WOA13d1_2_bilinear.nc), \ 
     45            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_reg05_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_reg05_2_bilinear.nc), \ 
     46            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_Lucazeau1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_Lucazeau1_2_bilinear.nc) 
    5447 
    5548 
    … …  
    6154        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-oce.xml , field_def_nemo-oce.xml  ), \ 
    6255        (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_${opa9_UserChoices_forcing}_${exptype}_cfg, namelist_cfg), \ 
    63         (${SUBMIT_DIR}/PARAM/XML/context_nemo.xml                   , context_nemo.xml               ), \ 
    64         (${SUBMIT_DIR}/PARAM/XML/iodef.xml                          , iodef.xml               ), \ 
    65         (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-oce.xml              , file_def_nemo-oce.xml   ) 
     56        (${SUBMIT_DIR}/PARAM/XML/context_nemo.xml              , context_nemo.xml               ), \ 
     57        (${SUBMIT_DIR}/PARAM/XML/iodef.xml                     , iodef.xml               ), \ 
     58        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-oce.xml         , file_def_nemo-oce.xml   ) 
    6659 
    6760 
    6861[RestartFiles] 
    69 List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc), \ 
    70         (EMPave.dat,  EMPave.dat, EMPave_old.dat) 
     62List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc) 
    7163 
    7264[OutputText] 
    … …  
    10799        (damping.coeff.nc , ${R_OUT_OCE_O_D}/${PREFIX}_damping.coeff.nc                              , NONE          ),\ 
    108100        (output.abort.nc  , ${R_OUT_OCE_D}/${PREFIX}_output.abort.nc                                 , NONE          ),\ 
    109         (output.init.nc   , ${R_OUT_OCE_O_I}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
     101        (output.init.nc   , ${R_OUT_OCE_O_D}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
    110102 
    111103# Monthly analysis 
    … …  
    125117TimeSeriesVars2D = (zos, tos, sos, mldr10_1, nshfls, rsntds, rsds, friver, hc300, wfo) 
    126118ChunckJob2D = NONE 
    127 TimeSeriesVars3D = (e3t, thetao, so) 
    128 ChunckJob3D = 100Y 
     119TimeSeriesVars3D = (thetao, so) 
     120ChunckJob3D = NONE 
    129121Seasonal=ON 
    130122 
    … …  
    132124Patches = () 
    133125GatherWithInternal = (nav_lon, nav_lat, depthu, time_counter, time_centered, time_centered_bounds) 
    134 TimeSeriesVars2D = (tauuo) 
     126TimeSeriesVars2D = () 
    135127ChunckJob2D = NONE 
    136 TimeSeriesVars3D = (e3u, uocetr_eff) 
    137 ChunckJob3D = 100Y 
     128TimeSeriesVars3D = () 
     129ChunckJob3D = NONE 
    138130Seasonal=ON 
    139131 
    … …  
    141133Patches = () 
    142134GatherWithInternal = (nav_lon, nav_lat, depthv, time_counter, time_centered, time_centered_bounds) 
    143 TimeSeriesVars2D = (tauvo) 
     135TimeSeriesVars2D = () 
    144136ChunckJob2D = NONE 
    145 TimeSeriesVars3D = (e3v, vocetr_eff) 
    146 ChunckJob3D = 100Y 
     137TimeSeriesVars3D = () 
     138ChunckJob3D = NONE 
    147139Seasonal=ON 
    148140 
    … …  
    153145ChunckJob2D = NONE 
    154146TimeSeriesVars3D = ( ) 
    155 ChunckJob3D = 100Y 
     147ChunckJob3D = NONE 
    156148Seasonal=OFF 
    157149 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_TRC/core/clim/config.card

    r5535 r6601  
    4949OCE= (opa9, NEMO_v4) 
    5050ICE= (si3,  SI3v1) 
    51 MBG= (pisces, PISCESv2) 
     51MBG= (trc,  TOPv4) 
    5252IOS= (xios, XIOS) 
    5353#======================================================================== 
    … …  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 586MPI) 
     58OCE= (opa_online_${OptMode}.exe, nemo, 557MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_TRC/core/ia/COMP/opa9.card

    r6142 r6601  
    44[UserChoices] 
    55#============================================================== 
    6 ORCA_version=eORCA1.4 
     6ORCA_version=eORCA1.4.2 
    77mesh_mask=n 
    88OutputLevel=10 
    99forcing=core 
    10 R_FORCING=${R_IN}/OCE/NEMO/FORCINGS/COREII 
     10R_FORCING=${R_IN}/OCE/NEMO/FORCINGS/COREIIcorr 
    1111ListForcing=(u_10_CORE2_fill v_10_CORE2_fill t_10_CORE2_fill q_10_CORE2_fill ncar_rad_CORE2_fill ncar_precip_CORE2_fill slp_CORE2_fill) 
    1212YearForcingInit=1948 
    … …  
    1515 
    1616[InitialStateFiles] 
    17 List=   (${SUBMIT_DIR}/PARAM/NAMELIST/EMPave_old.dat, EMPave_old.dat) 
     17List=   () 
    1818 
    1919[BoundaryFiles] 
    … …  
    2121 
    2222 
    23 ListNonDel= (${opa9_UserChoices_R_FORCING}/weights_coreII_2_eorca1_bilinear.nc, weights_bilinear.nc), \ 
    24             (${opa9_UserChoices_R_FORCING}/weights_coreII_2_eorca1_bicubic.nc , weights_bicubic.nc), \ 
    25             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates.nc, coordinates.nc), \ 
    26             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates_xios.nc, coordinates_xios.nc ), \ 
    27             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_domain_cfg.nc, domain_cfg.nc ), \ 
    28             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_maskMFO.nc, maskMFO.nc ), \ 
    29             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_resto.nc, resto.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_subbasins.nc                        , subbasins.nc    ), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_bot.nc, mixing_power_bot.nc),\ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_pyc.nc, mixing_power_pyc.nc),\ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_cri.nc, mixing_power_cri.nc),\ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_bot.nc, decay_scale_bot.nc),\ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_cri.nc, decay_scale_cri.nc),\ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
    37             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     23ListNonDel= (${opa9_UserChoices_R_FORCING}/weights_coreII_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_bilinear.nc), \ 
     24            (${opa9_UserChoices_R_FORCING}/weights_coreII_2_${opa9_UserChoices_ORCA_version}_bicubic.nc , weights_bicubic.nc), \ 
     25            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_ModifStraits_domain_cfg.nc, domain_cfg.nc ), \ 
     26            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_maskMFO.nc, maskMFO.nc ), \ 
     27            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_resto.nc, resto.nc ), \ 
     28            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_subbasins.nc, subbasins.nc    ), \ 
     29            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_zdfiwm_forcing.nc, zdfiwm_forcing.nc),\ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_runoff-icb_DaiTrenberth_Depoorter.nc, runoff-icb_DaiTrenberth_Depoorter.nc),\ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sss_absolute_PHC2_salx_2004_08_03_clim.nc, sss_absolute_salinity.nc), \ 
    3834            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/conservative_temperature_WOA13_decav_Reg1L75_clim.nc, .), \ 
    3935            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/absolute_salinity_WOA13_decav_Reg1L75_clim.nc, .), \ 
    40             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/sss_absolute_PHC2_salx_2004_08_03_clim_eORCA1.nc, sss_absolute_salinity.nc), \ 
    41             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/Goutorbe_ghflux.nc, .),\ 
    42             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/runoff-icb_DaiTrenberth_Depoorter_eORCA1.nc, .),\ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/Lucazeau_ghflux.nc, .),\ 
    4337            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/merged_ESACCI_BIOMER4V1R1_CHL_REG05.nc, .),\ 
    44             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_WOA13d1_2_eorca1_bilinear.nc, .), \ 
    45             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_3D_WOA13d1_2_eorca1_bilinear.nc, .), \ 
    46             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_reg05_2_eorca1_bilinear.nc, .), \ 
    47             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_Goutorbe1_2_eorca1_bilinear.nc, .) 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_WOA13d1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_WOA13d1_2_bilinear.nc), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_3D_WOA13d1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_WOA13d1_2_bilinear.nc), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_reg05_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_reg05_2_bilinear.nc), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_Lucazeau1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_Lucazeau1_2_bilinear.nc) 
    4842 
    4943 
    … …  
    6155 
    6256[RestartFiles] 
    63 List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc), \ 
    64         (EMPave.dat,  EMPave.dat, EMPave_old.dat) 
     57List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc) 
    6558 
    6659[OutputText] 
    … …  
    10194        (damping.coeff.nc , ${R_OUT_OCE_O_D}/${PREFIX}_damping.coeff.nc                              , NONE          ),\ 
    10295        (output.abort.nc  , ${R_OUT_OCE_D}/${PREFIX}_output.abort.nc                                 , NONE          ),\ 
    103         (output.init.nc   , ${R_OUT_OCE_O_I}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
     96        (output.init.nc   , ${R_OUT_OCE_O_D}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
    10497 
    10598# Monthly analysis 
    … …  
    119112TimeSeriesVars2D = (zos, tos, sos, mldr10_1, nshfls, rsntds, rsds, friver, hc300, wfo) 
    120113ChunckJob2D = NONE 
    121 TimeSeriesVars3D = (e3t, thetao, so) 
    122 ChunckJob3D = 100Y 
     114TimeSeriesVars3D = (thetao, so) 
     115ChunckJob3D = NONE 
    123116Seasonal=ON 
    124117 
    … …  
    126119Patches = () 
    127120GatherWithInternal = (nav_lon, nav_lat, depthu, time_counter, time_centered, time_centered_bounds) 
    128 TimeSeriesVars2D = (tauuo) 
     121TimeSeriesVars2D = () 
    129122ChunckJob2D = NONE 
    130 TimeSeriesVars3D = (e3u, uocetr_eff) 
    131 ChunckJob3D = 100Y 
     123TimeSeriesVars3D = () 
     124ChunckJob3D = NONE 
    132125Seasonal=ON 
    133126 
    … …  
    135128Patches = () 
    136129GatherWithInternal = (nav_lon, nav_lat, depthv, time_counter, time_centered, time_centered_bounds) 
    137 TimeSeriesVars2D = (tauvo) 
     130TimeSeriesVars2D = () 
    138131ChunckJob2D = NONE 
    139 TimeSeriesVars3D = (e3v, vocetr_eff) 
    140 ChunckJob3D = 100Y 
     132TimeSeriesVars3D = () 
     133ChunckJob3D = NONE 
    141134Seasonal=ON 
    142135 
    … …  
    147140ChunckJob2D = NONE 
    148141TimeSeriesVars3D = ( ) 
    149 ChunckJob3D = 100Y 
     142ChunckJob3D = NONE 
    150143Seasonal=OFF 
    151144 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_TRC/core/ia/config.card

    r5535 r6601  
    4949OCE= (opa9, NEMO_v4) 
    5050ICE= (si3,  SI3v1) 
    51 MBG= (pisces, PISCESv2) 
     51MBG= (trc,  TOPv4) 
    5252IOS= (xios, XIOS) 
    5353#======================================================================== 
    … …  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 586MPI) 
     58OCE= (opa_online_${OptMode}.exe, nemo, 557MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_TRC/jra/ia/COMP/opa9.card

    r6142 r6601  
    44[UserChoices] 
    55#============================================================== 
    6 ORCA_version=eORCA1.4 
     6ORCA_version=eORCA1.4.2 
    77mesh_mask=n 
    88OutputLevel=10 
    … …  
    1515 
    1616[InitialStateFiles] 
    17 List=   (${SUBMIT_DIR}/PARAM/NAMELIST/EMPave_old.dat, EMPave_old.dat) 
     17List=   () 
    1818 
    1919[BoundaryFiles] 
    … …  
    2121 
    2222 
    23 ListNonDel= (${opa9_UserChoices_R_FORCING}/weights_JRA55_eORCA1_bilinear.nc, weights_bilinear.nc), \ 
    24             (${opa9_UserChoices_R_FORCING}/weights_JRA55_eORCA1_bicubic.nc , weights_bicubic.nc), \ 
    25             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates.nc, coordinates.nc), \ 
    26             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates_xios.nc, coordinates_xios.nc ), \ 
    27             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_domain_cfg.nc, domain_cfg.nc ), \ 
    28             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_maskMFO.nc, maskMFO.nc ), \ 
    29             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_resto.nc, resto.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_subbasins.nc                        , subbasins.nc    ), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_bot.nc, mixing_power_bot.nc),\ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_pyc.nc, mixing_power_pyc.nc),\ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_cri.nc, mixing_power_cri.nc),\ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_bot.nc, decay_scale_bot.nc),\ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_cri.nc, decay_scale_cri.nc),\ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
    37             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     23ListNonDel= (${opa9_UserChoices_R_FORCING}/weights_JRA55_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_bilinear.nc), \ 
     24            (${opa9_UserChoices_R_FORCING}/weights_JRA55_${opa9_UserChoices_ORCA_version}_bicubic.nc , weights_bicubic.nc), \ 
     25            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_ModifStraits_domain_cfg.nc, domain_cfg.nc ), \ 
     26            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_maskMFO.nc, maskMFO.nc ), \ 
     27            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_resto.nc, resto.nc ), \ 
     28            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_subbasins.nc, subbasins.nc    ), \ 
     29            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_zdfiwm_forcing.nc, zdfiwm_forcing.nc),\ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_runoff-icb_DaiTrenberth_Depoorter.nc, runoff-icb_DaiTrenberth_Depoorter.nc),\ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sss_absolute_PHC2_salx_2004_08_03_clim.nc, sss_absolute_salinity.nc), \ 
    3834            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/conservative_temperature_WOA13_decav_Reg1L75_clim.nc, .), \ 
    3935            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/absolute_salinity_WOA13_decav_Reg1L75_clim.nc, .), \ 
    40             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/sss_absolute_PHC2_salx_2004_08_03_clim_eORCA1.nc, sss_absolute_salinity.nc), \ 
    41             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/Goutorbe_ghflux.nc, .),\ 
    42             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/runoff-icb_DaiTrenberth_Depoorter_eORCA1.nc, .),\ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/Lucazeau_ghflux.nc, .),\ 
    4337            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/merged_ESACCI_BIOMER4V1R1_CHL_REG05.nc, .),\ 
    44             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_WOA13d1_2_eorca1_bilinear.nc, .), \ 
    45             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_3D_WOA13d1_2_eorca1_bilinear.nc, .), \ 
    46             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_reg05_2_eorca1_bilinear.nc, .), \ 
    47             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_Goutorbe1_2_eorca1_bilinear.nc, .) 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_WOA13d1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_WOA13d1_2_bilinear.nc), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_3D_WOA13d1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_WOA13d1_2_bilinear.nc), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_reg05_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_reg05_2_bilinear.nc), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/weights_Lucazeau1_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_Lucazeau1_2_bilinear.nc) 
    4842 
    4943 
    … …  
    5549        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-oce.xml , field_def_nemo-oce.xml  ), \ 
    5650        (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_${opa9_UserChoices_forcing}_${exptype}_cfg, namelist_cfg), \ 
    57         (${SUBMIT_DIR}/PARAM/XML/context_nemo.xml                   , context_nemo.xml               ), \ 
    58         (${SUBMIT_DIR}/PARAM/XML/iodef.xml                          , iodef.xml               ), \ 
    59         (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-oce.xml              , file_def_nemo-oce.xml   ) 
     51        (${SUBMIT_DIR}/PARAM/XML/context_nemo.xml              , context_nemo.xml               ), \ 
     52        (${SUBMIT_DIR}/PARAM/XML/iodef.xml                     , iodef.xml               ), \ 
     53        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-oce.xml         , file_def_nemo-oce.xml   ) 
    6054 
    6155 
    6256[RestartFiles] 
    63 List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc), \ 
    64         (EMPave.dat,  EMPave.dat, EMPave_old.dat) 
     57List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc) 
    6558 
    6659[OutputText] 
    … …  
    10194        (damping.coeff.nc , ${R_OUT_OCE_O_D}/${PREFIX}_damping.coeff.nc                              , NONE          ),\ 
    10295        (output.abort.nc  , ${R_OUT_OCE_D}/${PREFIX}_output.abort.nc                                 , NONE          ),\ 
    103         (output.init.nc   , ${R_OUT_OCE_O_I}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
     96        (output.init.nc   , ${R_OUT_OCE_O_D}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
    10497 
    10598# Monthly analysis 
    … …  
    119112TimeSeriesVars2D = (zos, tos, sos, mldr10_1, nshfls, rsntds, rsds, friver, hc300, wfo) 
    120113ChunckJob2D = NONE 
    121 TimeSeriesVars3D = (e3t, thetao, so) 
    122 ChunckJob3D = 100Y 
     114TimeSeriesVars3D = (thetao, so) 
     115ChunckJob3D = NONE 
    123116Seasonal=ON 
    124117 
    … …  
    126119Patches = () 
    127120GatherWithInternal = (nav_lon, nav_lat, depthu, time_counter, time_centered, time_centered_bounds) 
    128 TimeSeriesVars2D = (tauuo) 
     121TimeSeriesVars2D = () 
    129122ChunckJob2D = NONE 
    130 TimeSeriesVars3D = (e3u, uocetr_eff) 
    131 ChunckJob3D = 100Y 
     123TimeSeriesVars3D = () 
     124ChunckJob3D = NONE 
    132125Seasonal=ON 
    133126 
    … …  
    135128Patches = () 
    136129GatherWithInternal = (nav_lon, nav_lat, depthv, time_counter, time_centered, time_centered_bounds) 
    137 TimeSeriesVars2D = (tauvo) 
     130TimeSeriesVars2D = () 
    138131ChunckJob2D = NONE 
    139 TimeSeriesVars3D = (e3v, vocetr_eff) 
    140 ChunckJob3D = 100Y 
     132TimeSeriesVars3D = () 
     133ChunckJob3D = NONE 
    141134Seasonal=ON 
    142135 
    … …  
    147140ChunckJob2D = NONE 
    148141TimeSeriesVars3D = ( ) 
    149 ChunckJob3D = 100Y 
     142ChunckJob3D = NONE 
    150143Seasonal=OFF 
    151144 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_TRC/jra/ia/config.card

    r5535 r6601  
    4949OCE= (opa9, NEMO_v4) 
    5050ICE= (si3,  SI3v1) 
    51 MBG= (pisces, PISCESv2) 
     51MBG= (trc,  TOPv4) 
    5252IOS= (xios, XIOS) 
    5353#======================================================================== 
    … …  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 586MPI) 
     58OCE= (opa_online_${OptMode}.exe, nemo, 557MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/core/clim/COMP/opa9.card

    r6142 r6601  
    44[UserChoices] 
    55#============================================================== 
    6 ORCA_version=ORCA2.4 
     6ORCA_version=ORCA2.4.2 
    77mesh_mask=n 
    88OutputLevel=10 
    99forcing=core 
    10 R_FORCING=${R_IN}/OCE/NEMO/FORCINGS/COREIIcorr 
     10R_FORCING=${R_IN}/OCE/NEMO/FORCINGS/COREII 
    1111#============================================================== 
    1212 
    1313[InitialStateFiles] 
    14 List=   (${SUBMIT_DIR}/PARAM/NAMELIST/EMPave_old.dat, EMPave_old.dat) 
     14List=   () 
    1515 
    1616[BoundaryFiles] 
    17 List=   () 
    18  
     17List=  () 
    1918 
    2019ListNonDel= (${opa9_UserChoices_R_FORCING}/u_10.15JUNE2009_fill.nc            , u_10_CORE2_fill.nc), \ 
    … …  
    2726            (${opa9_UserChoices_R_FORCING}/ncar_precip.15JUNE2009_fill.nc     , ncar_precip_CORE2_fill.nc), \ 
    2827            (${opa9_UserChoices_R_FORCING}/slp.15JUNE2009_fill.nc             , slp_CORE2_fill.nc), \ 
    29             (${opa9_UserChoices_R_FORCING}/weights_core_orca2_bilinear_noc.nc, weights_bilinear.nc), \ 
    30             (${opa9_UserChoices_R_FORCING}/weights_core_orca2_bicubic_noc.nc , weights_bicubic.nc), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates.nc, coordinates.nc), \ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates_xios.nc, coordinates_xios.nc ), \ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_domain_cfg.nc, domain_cfg.nc ), \ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_maskMFO.nc, maskMFO.nc ), \ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_resto.nc, resto.nc ), \ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_subbasins.nc , subbasins.nc    ), \ 
    37             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_bot.nc, mixing_power_bot.nc),\ 
    38             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_pyc.nc, mixing_power_pyc.nc),\ 
    39             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_cri.nc, mixing_power_cri.nc),\ 
    40             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_bot.nc, decay_scale_bot.nc),\ 
    41             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_cri.nc, decay_scale_cri.nc),\ 
    42             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
    43             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
    44             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_geothermal_heating.nc, geothermal_heating.nc),\ 
    45             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/conservative_temperature_WOA13_decav_clim_ORCA2.nc, conservative_temperature_WOA13_decav_clim_ORCA2.nc), \ 
    46             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/absolute_salinity_WOA13_decav_clim_ORCA2.nc, absolute_salinity_WOA13_decav_clim_ORCA2.nc), \ 
    47             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/sss_absolute_salinity_WOA13_decav_clim_ORCA2.nc, sss_absolute_salinity_WOA13_decav_clim_ORCA2.nc), \ 
    48             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/runoff_core_monthly_ORCA2.nc, runoff_core_monthly.nc),\ 
    49             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/chlorophyll_ORCA2.nc, chlorophyll.nc) 
     28            (${opa9_UserChoices_R_FORCING}/weights_coreII_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_bilinear.nc), \ 
     29            (${opa9_UserChoices_R_FORCING}/weights_coreII_2_${opa9_UserChoices_ORCA_version}_bicubic.nc , weights_bicubic.nc), \ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/GRIDS/${opa9_UserChoices_ORCA_version}_domain_cfg.nc, domain_cfg.nc ), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_maskMFO.nc, maskMFO.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_resto.nc, resto.nc ), \ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_subbasins.nc, subbasins.nc    ), \ 
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_zdfiwm_forcing.nc, zdfiwm_forcing.nc),\ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_runoff_core_monthly.nc, runoff_core_monthly.nc),\ 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sss_absolute_salinity_WOA13_decav_clim.nc, sss_absolute_salinity.nc), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_conservative_temperature_WOA13_decav_clim.nc, conservative_temperature_WOA13_decav_clim.nc), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_absolute_salinity_WOA13_decav_clim.nc, absolute_salinity_WOA13_decav_clim.nc), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_geothermal_heating.nc, geothermal_heating.nc),\ 
     42            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_chlorophyll.nc, chlorophyll.nc) 
    5043 
    5144 
    … …  
    6356 
    6457[RestartFiles] 
    65 List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc), \ 
    66         (EMPave.dat,  EMPave.dat, EMPave_old.dat) 
     58List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc) 
    6759 
    6860[OutputText] 
    … …  
    10395        (damping.coeff.nc , ${R_OUT_OCE_O_D}/${PREFIX}_damping.coeff.nc                              , NONE          ),\ 
    10496        (output.abort.nc  , ${R_OUT_OCE_D}/${PREFIX}_output.abort.nc                                 , NONE          ),\ 
    105         (output.init.nc   , ${R_OUT_OCE_O_I}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
     97        (output.init.nc   , ${R_OUT_OCE_O_D}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
    10698 
    10799# Monthly analysis 
    … …  
    121113TimeSeriesVars2D = (zos, tos, sos, mldr10_1, nshfls, rsntds, rsds, friver, hc300, wfo) 
    122114ChunckJob2D = NONE 
    123 TimeSeriesVars3D = (e3t, thetao, so) 
    124 ChunckJob3D = 100Y 
     115TimeSeriesVars3D = (thetao, so) 
     116ChunckJob3D = NONE 
    125117Seasonal=ON 
    126118 
    … …  
    128120Patches = () 
    129121GatherWithInternal = (nav_lon, nav_lat, depthu, time_counter, time_centered, time_centered_bounds) 
    130 TimeSeriesVars2D = (tauuo) 
     122TimeSeriesVars2D = () 
    131123ChunckJob2D = NONE 
    132 TimeSeriesVars3D = (e3u, uocetr_eff) 
    133 ChunckJob3D = 100Y 
     124TimeSeriesVars3D = () 
     125ChunckJob3D = NONE 
    134126Seasonal=ON 
    135127 
    … …  
    137129Patches = () 
    138130GatherWithInternal = (nav_lon, nav_lat, depthv, time_counter, time_centered, time_centered_bounds) 
    139 TimeSeriesVars2D = (tauvo) 
     131TimeSeriesVars2D = () 
    140132ChunckJob2D = NONE 
    141 TimeSeriesVars3D = (e3v, vocetr_eff) 
    142 ChunckJob3D = 100Y 
     133TimeSeriesVars3D = () 
     134ChunckJob3D = NONE 
    143135Seasonal=ON 
    144136 
    … …  
    149141ChunckJob2D = NONE 
    150142TimeSeriesVars3D = ( ) 
    151 ChunckJob3D = 100Y 
     143ChunckJob3D = NONE 
    152144Seasonal=OFF 
    153145 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/core/clim/COMP/pisces.card

    r6142 r6601  
    44[UserChoices] 
    55pis=y 
     6gas=n 
    67age=n 
    78cfc11=n 
    89cfc12=n 
     10sf6=n 
     11c14=n 
    912PisFreq=1 
    1013Offline_Mode=n 
    11 Co2Anthr=n 
    12 AtmCo2=2.8432e+02 
     14AnthrGas=n 
     15AtmCo2=2.78000e+02 
     16AtmN2o=2.74372e+02 
     17AtmCos=3.22225e+02 
    1318OutputLevel=10 
    1419 
    … …  
    1924List=       () 
    2025 
    21 ListNonDel= (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/TDIC_GLODAPv2.1_annual_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
    22             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/TALK_GLODAPv2.1_annual_r360x180xl31.nc , data_ALK_nomask.nc ), \ 
    23             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/O2_WOA2009_monthly_r360x180xl31.nc     , data_OXY_nomask.nc ), \ 
    24             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PO4_WOA2009_monthly_r360x180xl31.nc    , data_PO4_nomask.nc ), \ 
    25             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Si_WOA2009_monthly_r360x180xl31.nc     , data_SIL_nomask.nc ), \ 
    26             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/NO3_WOA2009_monthly_r360x180xl31.nc    , data_NO3_nomask.nc ), \ 
    27             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_monthly_r360x180xl31.nc     , data_DOC_nomask.nc ), \ 
    28             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Fer_PISCES_monthly_r360x180xl31.nc     , data_FER_nomask.nc ), \ 
    29             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_orca2_bilinear.nc    , weights_3D_r360x180_bilin.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/DUST_INCA_LOI6012-histAER_1M_1850.nc, dust.orca.nc      ), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/Ndep_input4MIPs_surfaceFluxes_CMIP_NCAR-CCMI-2-0_gn_185001-185012-clim.nc, ndeposition.orca.nc), \ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/weights_LMD144142_ORCA2_bilinear.nc , weights_lmd144142_bilin.nc ), \ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/weights_CMIP_NCAR-CCMI_ORCA2_bilinear.nc, weights_2d_bilin.nc), \ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/pmarge_etopo_ORCA2.nc                    , bathy.orca.nc      ), \ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/river_global_news_ORCA2.nc               , river.orca.nc      ), \ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/par_fraction_gewex_clim90s00s_ORCA2.nc   , par.orca.nc        ), \ 
    37             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Solubility_T62_Mahowald_ORCA2.nc         , solubility.orca.nc ), \ 
    38             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CFCs_CDIAC.dat                      , CFCs_CDIAC.dat    ), \ 
    39             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CO2_OMIP6_1600_2014.txt             , atcco2.txt         ) 
    40  
     26ListNonDel= (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PiDIC_GLODAPv2_Lauvset2016_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
     27            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/TALK_GLODAPv2_Lauvset2016_r360x180xl31.nc , data_ALK_nomask.nc ), \ 
     28            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/O2_WOA2013_r360x180xl31.nc                , data_OXY_nomask.nc ), \ 
     29            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PO4_WOA2013_r360x180xl31.nc               , data_PO4_nomask.nc ), \ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Si_WOA2013_r360x180xl31.nc                , data_SIL_nomask.nc ), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_annual_r360x180xl31.nc         , data_DOC_nomask.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Fer_FEMIP_model_median_r360x180xl31.nc    , data_FER_nomask.nc ), \ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/NO3_WOA2013_r360x180xl31.nc               , data_NO3_nomask.nc ), \ 
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/N2O_PISCES_annual_r360x180xl31.nc         , data_N2O_nomask.nc ), \ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DMS_PISCES_annual_r360x180xl31.nc         , data_DMS_nomask.nc ), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ISP_PISCES_annual_r360x180xl31.nc         , data_ISP_nomask.nc ), \ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/CO_PISCES_annual_r360x180xl31.nc          , data_CO_nomask.nc ), \ 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/COS_PISCES_annual_r360x180xl31.nc         , data_COS_nomask.nc ), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_r360x180_bilin.nc ), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_2D_r360x180_bilin.nc ), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_pmarge_etopo.nc                    , pmarge.orca.nc      ), \ 
     42            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
     43            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
     45            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4146 
    4247[ParametersFiles] 
    43 List=   (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_top_ref            , namelist_top_ref), \ 
    44         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_pisces_ref         , namelist_pisces_ref), \ 
    45         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_trc_ref            , namelist_trc_ref   ), \ 
    46         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml  ), \ 
    47         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml), \ 
    48         (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_top_cfg      , namelist_top_cfg           ), \ 
    49         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                , namelist_pisces_cfg        ), \ 
    50         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                   , namelist_trc_cfg           ), \ 
    51         (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                   , file_def_nemo-top.xml   ) 
     48List=   (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_top_ref            , namelist_top_ref             ), \ 
     49        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_pisces_ref         , namelist_pisces_ref          ), \ 
     50        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_trc_ref            , namelist_trc_ref             ), \ 
     51        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml    ), \ 
     52        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml ), \ 
     53        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_cfg                                   , namelist_top_p4z_cfg         ), \ 
     54        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_gas_cfg                               , namelist_top_p4z_gas_cfg     ), \ 
     55        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                                    , namelist_pisces_cfg          ), \ 
     56        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                                       , namelist_trc_cfg             ), \ 
     57        (${SUBMIT_DIR}/PARAM/NAMELIST/CFCs_CDIAC.dat                                         , CFCs_CDIAC.dat               ), \ 
     58        (${SUBMIT_DIR}/PARAM/NAMELIST/atmc14.dat                                             , atmc14.dat                   ), \ 
     59        (${SUBMIT_DIR}/PARAM/NAMELIST/splco2.dat                                             , splco2.dat                   ), \ 
     60        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                                       , file_def_nemo-top.xml        ), \ 
     61        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_co2_yearly_2022.txt  , atmco2.txt                   ), \ 
     62        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_n2o_yearly_2022.txt  , atmn2o.txt                   ), \ 
     63        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_cos_yearly_2022.txt  , atmcos.txt                   ) 
    5264 
    5365 
    … …  
    6577        (${config_UserChoices_JobName}_1y_CFC11.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC11.nc     , NONE ) , \ 
    6678        (${config_UserChoices_JobName}_1y_CFC12.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC12.nc     , NONE ) , \ 
     79        (${config_UserChoices_JobName}_1y_SF6.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_SF6.nc       , NONE ) , \ 
     80        (${config_UserChoices_JobName}_1y_C14.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_C14.nc       , NONE ) , \ 
     81        (${config_UserChoices_JobName}_1y_gas.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_gas.nc       , NONE ) , \ 
    6782        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    6883        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , NONE   ) , \ 
    6984        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , NONE   ) , \ 
     85        (${config_UserChoices_JobName}_1m_gas.nc           , ${R_OUT_MBG_O_M}/${PREFIX}_1M_gas.nc       , NONE   ) , \ 
    7086        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    7187 
    72 [Post_1D_bioscalar] 
    73 Patches = () 
    74 GatherWithInternal = (time_counter, time_instant, time_instant_bounds) 
    75 TimeSeriesVars2D = (pno3tot, ppo4tot, psiltot, palktot, pfertot, tcflx, tcflxcum, tcexp, tintpp, tnfix, tdenit) 
    76 ChunckJob2D = NONE 
    77 TimeSeriesVars3D = () 
    78 ChunckJob3D = NONE 
    79 Seasonal=OFF 
    8088 
    8189[Post_1M_bioscalar] 
    … …  
    92100GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    93101TimeSeriesVars2D = () 
    94 ChunckJob2D = 50Y 
    95 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si) 
    96 ChunckJob3D = 50Y 
     102ChunckJob2D = NONE 
     103TimeSeriesVars3D = () 
     104ChunckJob3D = NONE 
    97105Seasonal=OFF 
    98106 
    … …  
    100108Patches = () 
    101109GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    102 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) 
    103 ChunckJob2D = 50Y 
    104 TimeSeriesVars3D = (TPP) 
    105 ChunckJob3D = 50Y 
    106 Seasonal=OFF 
    107  
    108 [Post_1Y_ptrc_T] 
    109 Patches = () 
    110 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    111 TimeSeriesVars2D = () 
    112 ChunckJob2D = OFF 
    113 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si ) 
     110TimeSeriesVars2D = (Cflx, Dpco2) 
     111ChunckJob2D = 100Y 
     112TimeSeriesVars3D = () 
    114113ChunckJob3D = NONE 
    115114Seasonal=OFF 
    116115 
    117 [Post_1Y_diad_T] 
     116[Post_1M_gas] 
    118117Patches = () 
    119118GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    120 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup,  Nfix) 
    121 ChunckJob2D = 50Y 
    122 TimeSeriesVars3D = (PAR, TPP) 
    123 ChunckJob3D = 50Y 
    124 Seasonal=OFF 
    125  
    126 [Post_1Y_inerttrc] 
    127 Patches = () 
    128 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    129 TimeSeriesVars2D = () 
    130 ChunckJob2D = OFF 
    131 TimeSeriesVars3D = (Age) 
     119TimeSeriesVars2D = (N2Oflx, Dpn2o, DMSflx, COSflx, COflx, ISPflx) 
     120ChunckJob2D = 100Y 
     121TimeSeriesVars3D = () 
    132122ChunckJob3D = NONE 
    133123Seasonal=OFF 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/core/clim/config.card

    r5535 r6601  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 30MPI) 
     58OCE= (opa_online_${OptMode}.exe, nemo, 118MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/core/ia/COMP/opa9.card

    r6142 r6601  
    44[UserChoices] 
    55#============================================================== 
    6 ORCA_version=ORCA2.4 
     6ORCA_version=ORCA2.4.2 
    77mesh_mask=n 
    88OutputLevel=10 
    … …  
    1515 
    1616[InitialStateFiles] 
    17 List=   (${SUBMIT_DIR}/PARAM/NAMELIST/EMPave_old.dat, EMPave_old.dat) 
     17List=   () 
    1818 
    1919[BoundaryFiles] 
    20 List=   () 
     20List=  () 
    2121 
    2222 
    23 ListNonDel= (${opa9_UserChoices_R_FORCING}/weights_core_orca2_bilinear_noc.nc, weights_bilinear.nc), \ 
    24             (${opa9_UserChoices_R_FORCING}/weights_core_orca2_bicubic_noc.nc , weights_bicubic.nc), \ 
    25             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates.nc, coordinates.nc), \ 
    26             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates_xios.nc, coordinates_xios.nc ), \ 
    27             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_domain_cfg.nc, domain_cfg.nc ), \ 
    28             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_maskMFO.nc, maskMFO.nc ), \ 
    29             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_resto.nc, resto.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_subbasins.nc , subbasins.nc    ), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_bot.nc, mixing_power_bot.nc),\ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_pyc.nc, mixing_power_pyc.nc),\ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_cri.nc, mixing_power_cri.nc),\ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_bot.nc, decay_scale_bot.nc),\ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_cri.nc, decay_scale_cri.nc),\ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
    37             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
    38             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_geothermal_heating.nc, geothermal_heating.nc),\ 
    39             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/conservative_temperature_WOA13_decav_clim_ORCA2.nc, conservative_temperature_WOA13_decav_clim_ORCA2.nc), \ 
    40             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/absolute_salinity_WOA13_decav_clim_ORCA2.nc, absolute_salinity_WOA13_decav_clim_ORCA2.nc), \ 
    41             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/sss_absolute_salinity_WOA13_decav_clim_ORCA2.nc, sss_absolute_salinity_WOA13_decav_clim_ORCA2.nc), \ 
    42             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/runoff_core_monthly_ORCA2.nc, runoff_core_monthly.nc),\ 
    43             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/chlorophyll_ORCA2.nc, chlorophyll.nc) 
     23ListNonDel= (${opa9_UserChoices_R_FORCING}/weights_coreII_2_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_bilinear.nc), \ 
     24            (${opa9_UserChoices_R_FORCING}/weights_coreII_2_${opa9_UserChoices_ORCA_version}_bicubic.nc , weights_bicubic.nc), \ 
     25            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/GRIDS/${opa9_UserChoices_ORCA_version}_domain_cfg.nc, domain_cfg.nc ), \ 
     26            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_maskMFO.nc, maskMFO.nc ), \ 
     27            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_resto.nc, resto.nc ), \ 
     28            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_subbasins.nc, subbasins.nc    ), \ 
     29            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_zdfiwm_forcing.nc, zdfiwm_forcing.nc),\ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_runoff_core_monthly.nc, runoff_core_monthly.nc),\ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sss_absolute_salinity_WOA13_decav_clim.nc, sss_absolute_salinity.nc), \ 
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_conservative_temperature_WOA13_decav_clim.nc, conservative_temperature_WOA13_decav_clim.nc), \ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_absolute_salinity_WOA13_decav_clim.nc, absolute_salinity_WOA13_decav_clim.nc), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_geothermal_heating.nc, geothermal_heating.nc),\ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_chlorophyll.nc, chlorophyll.nc) 
    4438 
    4539 
    … …  
    5751 
    5852[RestartFiles] 
    59 List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc), \ 
    60         (EMPave.dat,  EMPave.dat, EMPave_old.dat) 
     53List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc) 
    6154 
    6255[OutputText] 
    … …  
    9790        (damping.coeff.nc , ${R_OUT_OCE_O_D}/${PREFIX}_damping.coeff.nc                              , NONE          ),\ 
    9891        (output.abort.nc  , ${R_OUT_OCE_D}/${PREFIX}_output.abort.nc                                 , NONE          ),\ 
    99         (output.init.nc   , ${R_OUT_OCE_O_I}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
     92        (output.init.nc   , ${R_OUT_OCE_O_D}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
    10093 
    10194# Monthly analysis 
    … …  
    115108TimeSeriesVars2D = (zos, tos, sos, mldr10_1, nshfls, rsntds, rsds, friver, hc300, wfo) 
    116109ChunckJob2D = NONE 
    117 TimeSeriesVars3D = (e3t, thetao, so) 
    118 ChunckJob3D = 100Y 
     110TimeSeriesVars3D = (thetao, so) 
     111ChunckJob3D = NONE 
    119112Seasonal=ON 
    120113 
    … …  
    122115Patches = () 
    123116GatherWithInternal = (nav_lon, nav_lat, depthu, time_counter, time_centered, time_centered_bounds) 
    124 TimeSeriesVars2D = (tauuo) 
     117TimeSeriesVars2D = () 
    125118ChunckJob2D = NONE 
    126 TimeSeriesVars3D = (e3u, uocetr_eff) 
    127 ChunckJob3D = 100Y 
     119TimeSeriesVars3D = () 
     120ChunckJob3D = NONE 
    128121Seasonal=ON 
    129122 
    … …  
    131124Patches = () 
    132125GatherWithInternal = (nav_lon, nav_lat, depthv, time_counter, time_centered, time_centered_bounds) 
    133 TimeSeriesVars2D = (tauvo) 
     126TimeSeriesVars2D = () 
    134127ChunckJob2D = NONE 
    135 TimeSeriesVars3D = (e3v, vocetr_eff) 
    136 ChunckJob3D = 100Y 
     128TimeSeriesVars3D = () 
     129ChunckJob3D = NONE 
    137130Seasonal=ON 
    138131 
    … …  
    143136ChunckJob2D = NONE 
    144137TimeSeriesVars3D = ( ) 
    145 ChunckJob3D = 100Y 
     138ChunckJob3D = NONE 
    146139Seasonal=OFF 
    147140 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/core/ia/COMP/pisces.card

    r6142 r6601  
    44[UserChoices] 
    55pis=y 
     6gas=n 
    67age=n 
    78cfc11=n 
    89cfc12=n 
     10sf6=n 
     11c14=n 
    912PisFreq=1 
    1013Offline_Mode=n 
    11 Co2Anthr=n 
    12 AtmCo2=2.8432e+02 
     14AnthrGas=n 
     15AtmCo2=2.78000e+02 
     16AtmN2o=2.74372e+02 
     17AtmCos=3.22225e+02 
    1318OutputLevel=10 
    1419 
    … …  
    1722 
    1823[BoundaryFiles] 
    19 List=       (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/DUST_INCA_LOI6012-histAER_1M_${year}.nc, dust.orca.nc       ), \ 
    20             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/Ndep_input4MIPs_surfaceFluxes_CMIP_NCAR-CCMI-2-0_gn_${year}01-${year}12-clim.nc , ndeposition.orca.nc ) 
     24List=       () 
    2125 
    22 ListNonDel= (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/TDIC_GLODAPv2.1_annual_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
    23             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/TALK_GLODAPv2.1_annual_r360x180xl31.nc , data_ALK_nomask.nc ), \ 
    24             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/O2_WOA2009_monthly_r360x180xl31.nc     , data_OXY_nomask.nc ), \ 
    25             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PO4_WOA2009_monthly_r360x180xl31.nc    , data_PO4_nomask.nc ), \ 
    26             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Si_WOA2009_monthly_r360x180xl31.nc     , data_SIL_nomask.nc ), \ 
    27             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/NO3_WOA2009_monthly_r360x180xl31.nc    , data_NO3_nomask.nc ), \ 
    28             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_monthly_r360x180xl31.nc     , data_DOC_nomask.nc ), \ 
    29             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Fer_PISCES_monthly_r360x180xl31.nc     , data_FER_nomask.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_orca2_bilinear.nc    , weights_3D_r360x180_bilin.nc ), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/weights_LMD144142_ORCA2_bilinear.nc , weights_lmd144142_bilin.nc ), \ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/weights_CMIP_NCAR-CCMI_ORCA2_bilinear.nc, weights_2d_bilin.nc), \ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/pmarge_etopo_ORCA2.nc                    , bathy.orca.nc      ), \ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/river_global_news_ORCA2.nc               , river.orca.nc      ), \ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/par_fraction_gewex_clim90s00s_ORCA2.nc   , par.orca.nc        ), \ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Solubility_T62_Mahowald_ORCA2.nc         , solubility.orca.nc ), \ 
    37             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CFCs_CDIAC.dat                      , CFCs_CDIAC.dat     ), \ 
    38             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CO2_OMIP6_1600_2014.txt             , atcco2.txt         ) 
    39  
     26ListNonDel= (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PiDIC_GLODAPv2_Lauvset2016_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
     27            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/TALK_GLODAPv2_Lauvset2016_r360x180xl31.nc , data_ALK_nomask.nc ), \ 
     28            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/O2_WOA2013_r360x180xl31.nc                , data_OXY_nomask.nc ), \ 
     29            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PO4_WOA2013_r360x180xl31.nc               , data_PO4_nomask.nc ), \ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Si_WOA2013_r360x180xl31.nc                , data_SIL_nomask.nc ), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_annual_r360x180xl31.nc         , data_DOC_nomask.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Fer_FEMIP_model_median_r360x180xl31.nc    , data_FER_nomask.nc ), \ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/NO3_WOA2013_r360x180xl31.nc               , data_NO3_nomask.nc ), \ 
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/N2O_PISCES_annual_r360x180xl31.nc         , data_N2O_nomask.nc ), \ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DMS_PISCES_annual_r360x180xl31.nc         , data_DMS_nomask.nc ), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ISP_PISCES_annual_r360x180xl31.nc         , data_ISP_nomask.nc ), \ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/CO_PISCES_annual_r360x180xl31.nc          , data_CO_nomask.nc  ), \ 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/COS_PISCES_annual_r360x180xl31.nc         , data_COS_nomask.nc ), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_r360x180_bilin.nc ), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_2D_r360x180_bilin.nc ), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_pmarge_etopo.nc                    , pmarge.orca.nc      ), \ 
     42            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
     43            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
     45            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4046 
    4147[ParametersFiles] 
    42 List=   (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_top_ref            , namelist_top_ref), \ 
    43         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_pisces_ref         , namelist_pisces_ref), \ 
    44         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_trc_ref            , namelist_trc_ref   ), \ 
    45         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml  ), \ 
    46         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml), \ 
    47         (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_top_cfg      , namelist_top_cfg           ), \ 
    48         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                , namelist_pisces_cfg        ), \ 
    49         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                   , namelist_trc_cfg           ), \ 
    50         (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                   , file_def_nemo-top.xml      ) 
     48List=   (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_top_ref            , namelist_top_ref             ), \ 
     49        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_pisces_ref         , namelist_pisces_ref          ), \ 
     50        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_trc_ref            , namelist_trc_ref             ), \ 
     51        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml    ), \ 
     52        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml ), \ 
     53        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_cfg                                   , namelist_top_p4z_cfg         ), \ 
     54        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_gas_cfg                               , namelist_top_p4z_gas_cfg     ), \ 
     55        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                                    , namelist_pisces_cfg          ), \ 
     56        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                                       , namelist_trc_cfg             ), \ 
     57        (${SUBMIT_DIR}/PARAM/NAMELIST/CFCs_CDIAC.dat                                         , CFCs_CDIAC.dat               ), \ 
     58        (${SUBMIT_DIR}/PARAM/NAMELIST/atmc14.dat                                             , atmc14.dat                   ), \ 
     59        (${SUBMIT_DIR}/PARAM/NAMELIST/splco2.dat                                             , splco2.dat                   ), \ 
     60        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                                       , file_def_nemo-top.xml        ), \ 
     61        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_co2_yearly_2022.txt  , atmco2.txt                   ), \ 
     62        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_n2o_yearly_2022.txt  , atmn2o.txt                   ), \ 
     63        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_cos_yearly_2022.txt  , atmcos.txt                   ) 
    5164 
    5265 
    … …  
    6477        (${config_UserChoices_JobName}_1y_CFC11.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC11.nc     , NONE ) , \ 
    6578        (${config_UserChoices_JobName}_1y_CFC12.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC12.nc     , NONE ) , \ 
     79        (${config_UserChoices_JobName}_1y_SF6.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_SF6.nc       , NONE ) , \ 
     80        (${config_UserChoices_JobName}_1y_C14.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_C14.nc       , NONE ) , \ 
     81        (${config_UserChoices_JobName}_1y_gas.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_gas.nc       , NONE ) , \ 
    6682        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    6783        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , NONE   ) , \ 
    6884        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , NONE   ) , \ 
     85        (${config_UserChoices_JobName}_1m_gas.nc           , ${R_OUT_MBG_O_M}/${PREFIX}_1M_gas.nc       , NONE   ) , \ 
    6986        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    7087 
    71 [Post_1D_bioscalar] 
    72 Patches = () 
    73 GatherWithInternal = (time_counter, time_instant, time_instant_bounds) 
    74 TimeSeriesVars2D = (pno3tot, ppo4tot, psiltot, palktot, pfertot, tcflx, tcflxcum, tcexp, tintpp, tnfix, tdenit) 
    75 ChunckJob2D = NONE 
    76 TimeSeriesVars3D = () 
    77 ChunckJob3D = NONE 
    78 Seasonal=OFF 
    7988 
    8089[Post_1M_bioscalar] 
    … …  
    91100GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    92101TimeSeriesVars2D = () 
    93 ChunckJob2D = 50Y 
    94 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si) 
    95 ChunckJob3D = 50Y 
     102ChunckJob2D = NONE 
     103TimeSeriesVars3D = () 
     104ChunckJob3D = NONE 
    96105Seasonal=OFF 
    97106 
    … …  
    99108Patches = () 
    100109GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    101 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) 
    102 ChunckJob2D = 50Y 
    103 TimeSeriesVars3D = (TPP) 
    104 ChunckJob3D = 50Y 
    105 Seasonal=OFF 
    106  
    107 [Post_1Y_ptrc_T] 
    108 Patches = () 
    109 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    110 TimeSeriesVars2D = () 
    111 ChunckJob2D = OFF 
    112 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si ) 
     110TimeSeriesVars2D = (Cflx, Dpco2) 
     111ChunckJob2D = 100Y 
     112TimeSeriesVars3D = () 
    113113ChunckJob3D = NONE 
    114114Seasonal=OFF 
    115115 
    116 [Post_1Y_diad_T] 
     116[Post_1M_gas] 
    117117Patches = () 
    118118GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    119 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup,  Nfix) 
    120 ChunckJob2D = 50Y 
    121 TimeSeriesVars3D = (PAR, TPP) 
    122 ChunckJob3D = 50Y 
    123 Seasonal=OFF 
    124  
    125 [Post_1Y_inerttrc] 
    126 Patches = () 
    127 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    128 TimeSeriesVars2D = () 
    129 ChunckJob2D = OFF 
    130 TimeSeriesVars3D = (Age) 
     119TimeSeriesVars2D = (N2Oflx, Dpn2o, DMSflx, COSflx, COflx, ISPflx) 
     120ChunckJob2D = 100Y 
     121TimeSeriesVars3D = () 
    131122ChunckJob3D = NONE 
    132123Seasonal=OFF 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/core/ia/config.card

    r5535 r6601  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 30MPI) 
     58OCE= (opa_online_${OptMode}.exe, nemo, 118MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/jra/ia/COMP/opa9.card

    r6142 r6601  
    44[UserChoices] 
    55#============================================================== 
    6 ORCA_version=ORCA2.4 
     6ORCA_version=ORCA2.4.2 
    77mesh_mask=n 
    8 OutputLevel=forcing=jra 
     8OutputLevel=10 
     9forcing=jra 
    910R_FORCING=${R_IN}/OCE/NEMO/FORCINGS/MRI-JRA55-do-1-4-0 
    1011ListForcing=(u_10 v_10 t_10 q_10 rsds rlds precip snow slp) 
    … …  
    1415 
    1516[InitialStateFiles] 
    16 List=   (${SUBMIT_DIR}/PARAM/NAMELIST/EMPave_old.dat, EMPave_old.dat) 
     17List=   () 
    1718 
    1819[BoundaryFiles] 
    19 List=   () 
     20List=  () 
    2021 
    2122 
    22 ListNonDel= (${opa9_UserChoices_R_FORCING}/weights_JRA55_ORCA2_bilinear.nc, weights_bilinear.nc), \ 
    23             (${opa9_UserChoices_R_FORCING}/weights_JRA55_ORCA2_bicubic.nc , weights_bicubic.nc), \ 
    24             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates.nc, coordinates.nc), \ 
    25             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_coordinates_xios.nc, coordinates_xios.nc ), \ 
    26             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_domain_cfg.nc, domain_cfg.nc ), \ 
    27             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_maskMFO.nc, maskMFO.nc ), \ 
    28             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_resto.nc, resto.nc ), \ 
    29             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_subbasins.nc , subbasins.nc    ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_bot.nc, mixing_power_bot.nc),\ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_pyc.nc, mixing_power_pyc.nc),\ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_mixing_power_cri.nc, mixing_power_cri.nc),\ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_bot.nc, decay_scale_bot.nc),\ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_decay_scale_cri.nc, decay_scale_cri.nc),\ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
    37             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${ORCAGRID}_geothermal_heating.nc, geothermal_heating.nc),\ 
    38             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/conservative_temperature_WOA13_decav_clim_ORCA2.nc, conservative_temperature_WOA13_decav_clim_ORCA2.nc), \ 
    39             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/absolute_salinity_WOA13_decav_clim_ORCA2.nc, absolute_salinity_WOA13_decav_clim_ORCA2.nc), \ 
    40             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/sss_absolute_salinity_WOA13_decav_clim_ORCA2.nc, sss_absolute_salinity_WOA13_decav_clim_ORCA2.nc), \ 
    41             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/runoff_core_monthly_ORCA2.nc, runoff_core_monthly.nc),\ 
    42             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/chlorophyll_ORCA2.nc, chlorophyll.nc) 
     23ListNonDel= (${opa9_UserChoices_R_FORCING}/weights_JRA55_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_bilinear.nc), \ 
     24            (${opa9_UserChoices_R_FORCING}/weights_JRA55_${opa9_UserChoices_ORCA_version}_bicubic.nc , weights_bicubic.nc), \ 
     25            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/GRIDS/${opa9_UserChoices_ORCA_version}_domain_cfg.nc, domain_cfg.nc ), \ 
     26            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_maskMFO.nc, maskMFO.nc ), \ 
     27            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_resto.nc, resto.nc ), \ 
     28            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_subbasins.nc, subbasins.nc    ), \ 
     29            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_zdfiwm_forcing.nc, zdfiwm_forcing.nc),\ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sali_ref_clim_monthly.nc, sali_ref_clim_monthly.nc), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_eddy_viscosity_3D.nc, eddy_viscosity_3D.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_runoff_core_monthly.nc, runoff_core_monthly.nc),\ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_sss_absolute_salinity_WOA13_decav_clim.nc, sss_absolute_salinity.nc), \ 
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_conservative_temperature_WOA13_decav_clim.nc, conservative_temperature_WOA13_decav_clim.nc), \ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_absolute_salinity_WOA13_decav_clim.nc, absolute_salinity_WOA13_decav_clim.nc), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_geothermal_heating.nc, geothermal_heating.nc),\ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/OPA/${opa9_UserChoices_ORCA_version}_chlorophyll.nc, chlorophyll.nc) 
    4338 
    4439 
    … …  
    5651 
    5752[RestartFiles] 
    58 List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc), \ 
    59         (EMPave.dat,  EMPave.dat, EMPave_old.dat) 
     53List=   (${config_UserChoices_JobName}_${NEMO_END}_restart.nc,  restart.nc, restart.nc) 
    6054 
    6155[OutputText] 
    … …  
    9690        (damping.coeff.nc , ${R_OUT_OCE_O_D}/${PREFIX}_damping.coeff.nc                              , NONE          ),\ 
    9791        (output.abort.nc  , ${R_OUT_OCE_D}/${PREFIX}_output.abort.nc                                 , NONE          ),\ 
    98         (output.init.nc   , ${R_OUT_OCE_O_I}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
     92        (output.init.nc   , ${R_OUT_OCE_O_D}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc,NONE    ) 
    9993 
    10094# Monthly analysis 
    … …  
    114108TimeSeriesVars2D = (zos, tos, sos, mldr10_1, nshfls, rsntds, rsds, friver, hc300, wfo) 
    115109ChunckJob2D = NONE 
    116 TimeSeriesVars3D = (e3t, thetao, so) 
    117 ChunckJob3D = 100Y 
     110TimeSeriesVars3D = (thetao, so) 
     111ChunckJob3D = NONE 
    118112Seasonal=ON 
    119113 
    … …  
    121115Patches = () 
    122116GatherWithInternal = (nav_lon, nav_lat, depthu, time_counter, time_centered, time_centered_bounds) 
    123 TimeSeriesVars2D = (tauuo) 
     117TimeSeriesVars2D = () 
    124118ChunckJob2D = NONE 
    125 TimeSeriesVars3D = (e3u, uocetr_eff) 
    126 ChunckJob3D = 100Y 
     119TimeSeriesVars3D = () 
     120ChunckJob3D = NONE 
    127121Seasonal=ON 
    128122 
    … …  
    130124Patches = () 
    131125GatherWithInternal = (nav_lon, nav_lat, depthv, time_counter, time_centered, time_centered_bounds) 
    132 TimeSeriesVars2D = (tauvo) 
     126TimeSeriesVars2D = () 
    133127ChunckJob2D = NONE 
    134 TimeSeriesVars3D = (e3v, vocetr_eff) 
    135 ChunckJob3D = 100Y 
     128TimeSeriesVars3D = () 
     129ChunckJob3D = NONE 
    136130Seasonal=ON 
    137131 
    … …  
    142136ChunckJob2D = NONE 
    143137TimeSeriesVars3D = ( ) 
    144 ChunckJob3D = 100Y 
     138ChunckJob3D = NONE 
    145139Seasonal=OFF 
    146140 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/jra/ia/COMP/pisces.card

    r6142 r6601  
    44[UserChoices] 
    55pis=y 
     6gas=n 
    67age=n 
    78cfc11=n 
    89cfc12=n 
     10sf6=n 
     11c14=n 
    912PisFreq=1 
    1013Offline_Mode=n 
    11 Co2Anthr=n 
    12 AtmCo2=2.8432e+02 
     14AnthrGas=n 
     15AtmCo2=2.78000e+02 
     16AtmN2o=2.74372e+02 
     17AtmCos=3.22225e+02 
    1318OutputLevel=10 
    1419 
    … …  
    1722 
    1823[BoundaryFiles] 
    19 List=       (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/DUST_INCA_LOI6012-histAER_1M_${year}.nc, dust.orca.nc       ), \ 
    20             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/Ndep_input4MIPs_surfaceFluxes_CMIP_NCAR-CCMI-2-0_gn_${year}01-${year}12-clim.nc , ndeposition.orca.nc ) 
     24List=       () 
    2125 
    22 ListNonDel= (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/TDIC_GLODAPv2.1_annual_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
    23             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/TALK_GLODAPv2.1_annual_r360x180xl31.nc , data_ALK_nomask.nc ), \ 
    24             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/O2_WOA2009_monthly_r360x180xl31.nc     , data_OXY_nomask.nc ), \ 
    25             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PO4_WOA2009_monthly_r360x180xl31.nc    , data_PO4_nomask.nc ), \ 
    26             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Si_WOA2009_monthly_r360x180xl31.nc     , data_SIL_nomask.nc ), \ 
    27             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/NO3_WOA2009_monthly_r360x180xl31.nc    , data_NO3_nomask.nc ), \ 
    28             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_monthly_r360x180xl31.nc     , data_DOC_nomask.nc ), \ 
    29             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Fer_PISCES_monthly_r360x180xl31.nc     , data_FER_nomask.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_orca2_bilinear.nc    , weights_3D_r360x180_bilin.nc ), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/weights_LMD144142_ORCA2_bilinear.nc , weights_lmd144142_bilin.nc ), \ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/weights_CMIP_NCAR-CCMI_ORCA2_bilinear.nc, weights_2d_bilin.nc), \ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/pmarge_etopo_ORCA2.nc                    , bathy.orca.nc      ), \ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/river_global_news_ORCA2.nc               , river.orca.nc      ), \ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/par_fraction_gewex_clim90s00s_ORCA2.nc   , par.orca.nc        ), \ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Solubility_T62_Mahowald_ORCA2.nc         , solubility.orca.nc ), \ 
    37             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CFCs_CDIAC.dat                      , CFCs_CDIAC.dat     ), \ 
    38             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CO2_OMIP6_1600_2014.txt             , atcco2.txt         ) 
    39  
     26ListNonDel= (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PiDIC_GLODAPv2_Lauvset2016_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
     27            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/TALK_GLODAPv2_Lauvset2016_r360x180xl31.nc , data_ALK_nomask.nc ), \ 
     28            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/O2_WOA2013_r360x180xl31.nc                , data_OXY_nomask.nc ), \ 
     29            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PO4_WOA2013_r360x180xl31.nc               , data_PO4_nomask.nc ), \ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Si_WOA2013_r360x180xl31.nc                , data_SIL_nomask.nc ), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_annual_r360x180xl31.nc         , data_DOC_nomask.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Fer_FEMIP_model_median_r360x180xl31.nc    , data_FER_nomask.nc ), \ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/NO3_WOA2013_r360x180xl31.nc               , data_NO3_nomask.nc ), \ 
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/N2O_PISCES_annual_r360x180xl31.nc         , data_N2O_nomask.nc ), \ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DMS_PISCES_annual_r360x180xl31.nc         , data_DMS_nomask.nc ), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ISP_PISCES_annual_r360x180xl31.nc         , data_ISP_nomask.nc ), \ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/CO_PISCES_annual_r360x180xl31.nc          , data_CO_nomask.nc  ), \ 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/COS_PISCES_annual_r360x180xl31.nc         , data_COS_nomask.nc ), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_r360x180_bilin.nc ), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_2D_r360x180_bilin.nc ), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_pmarge_etopo.nc                    , pmarge.orca.nc      ), \ 
     42            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
     43            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
     45            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4046 
    4147[ParametersFiles] 
    42 List=   (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_top_ref            , namelist_top_ref), \ 
    43         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_pisces_ref         , namelist_pisces_ref), \ 
    44         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_trc_ref            , namelist_trc_ref   ), \ 
    45         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml  ), \ 
    46         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml), \ 
    47         (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_top_cfg      , namelist_top_cfg           ), \ 
    48         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                , namelist_pisces_cfg        ), \ 
    49         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                   , namelist_trc_cfg           ), \ 
    50         (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                   , file_def_nemo-top.xml      ) 
     48List=   (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_top_ref            , namelist_top_ref             ), \ 
     49        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_pisces_ref         , namelist_pisces_ref          ), \ 
     50        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_trc_ref            , namelist_trc_ref             ), \ 
     51        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml    ), \ 
     52        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml ), \ 
     53        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_cfg                                   , namelist_top_p4z_cfg         ), \ 
     54        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_gas_cfg                               , namelist_top_p4z_gas_cfg     ), \ 
     55        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                                    , namelist_pisces_cfg          ), \ 
     56        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                                       , namelist_trc_cfg             ), \ 
     57        (${SUBMIT_DIR}/PARAM/NAMELIST/CFCs_CDIAC.dat                                         , CFCs_CDIAC.dat               ), \ 
     58        (${SUBMIT_DIR}/PARAM/NAMELIST/atmc14.dat                                             , atmc14.dat                   ), \ 
     59        (${SUBMIT_DIR}/PARAM/NAMELIST/splco2.dat                                             , splco2.dat                   ), \ 
     60        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                                       , file_def_nemo-top.xml        ), \ 
     61        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_co2_yearly_2022.txt  , atmco2.txt                   ), \ 
     62        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_n2o_yearly_2022.txt  , atmn2o.txt                   ), \ 
     63        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_cos_yearly_2022.txt  , atmcos.txt                   ) 
    5164 
    5265 
    … …  
    6477        (${config_UserChoices_JobName}_1y_CFC11.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC11.nc     , NONE ) , \ 
    6578        (${config_UserChoices_JobName}_1y_CFC12.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC12.nc     , NONE ) , \ 
     79        (${config_UserChoices_JobName}_1y_SF6.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_SF6.nc       , NONE ) , \ 
     80        (${config_UserChoices_JobName}_1y_C14.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_C14.nc       , NONE ) , \ 
     81        (${config_UserChoices_JobName}_1y_gas.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_gas.nc       , NONE ) , \ 
    6682        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    6783        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , NONE   ) , \ 
    6884        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , NONE   ) , \ 
     85        (${config_UserChoices_JobName}_1m_gas.nc           , ${R_OUT_MBG_O_M}/${PREFIX}_1M_gas.nc       , NONE   ) , \ 
    6986        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    7087 
    71 [Post_1D_bioscalar] 
    72 Patches = () 
    73 GatherWithInternal = (time_counter, time_instant, time_instant_bounds) 
    74 TimeSeriesVars2D = (pno3tot, ppo4tot, psiltot, palktot, pfertot, tcflx, tcflxcum, tcexp, tintpp, tnfix, tdenit) 
    75 ChunckJob2D = NONE 
    76 TimeSeriesVars3D = () 
    77 ChunckJob3D = NONE 
    78 Seasonal=OFF 
    7988 
    8089[Post_1M_bioscalar] 
    … …  
    91100GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    92101TimeSeriesVars2D = () 
    93 ChunckJob2D = 50Y 
    94 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si) 
    95 ChunckJob3D = 50Y 
     102ChunckJob2D = NONE 
     103TimeSeriesVars3D = () 
     104ChunckJob3D = NONE 
    96105Seasonal=OFF 
    97106 
    … …  
    99108Patches = () 
    100109GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    101 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) 
    102 ChunckJob2D = 50Y 
    103 TimeSeriesVars3D = (TPP) 
    104 ChunckJob3D = 50Y 
    105 Seasonal=OFF 
    106  
    107 [Post_1Y_ptrc_T] 
    108 Patches = () 
    109 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    110 TimeSeriesVars2D = () 
    111 ChunckJob2D = OFF 
    112 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si ) 
     110TimeSeriesVars2D = (Cflx, Dpco2) 
     111ChunckJob2D = 100Y 
     112TimeSeriesVars3D = () 
    113113ChunckJob3D = NONE 
    114114Seasonal=OFF 
    115115 
    116 [Post_1Y_diad_T] 
     116[Post_1M_gas] 
    117117Patches = () 
    118118GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    119 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup,  Nfix) 
    120 ChunckJob2D = 50Y 
    121 TimeSeriesVars3D = (PAR, TPP) 
    122 ChunckJob3D = 50Y 
    123 Seasonal=OFF 
    124  
    125 [Post_1Y_inerttrc] 
    126 Patches = () 
    127 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    128 TimeSeriesVars2D = () 
    129 ChunckJob2D = OFF 
    130 TimeSeriesVars3D = (Age) 
     119TimeSeriesVars2D = (N2Oflx, Dpn2o, DMSflx, COSflx, COflx, ISPflx) 
     120ChunckJob2D = 100Y 
     121TimeSeriesVars3D = () 
    131122ChunckJob3D = NONE 
    132123Seasonal=OFF 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/jra/ia/config.card

    r5535 r6601  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 30MPI) 
     58OCE= (opa_online_${OptMode}.exe, nemo, 118MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_OFF_PISCES/clim/COMP/pisces.card

    r6400 r6601  
    33 
    44[UserChoices] 
    5 #============================================================== 
    6 ORCA_version=ORCA2.4 
    75pis=y 
     6gas=n 
    87age=n 
    98cfc11=n 
    109cfc12=n 
     10sf6=n 
     11c14=n 
     12Offline_Mode=y 
    1113PisFreq=4 
    12 Offline_Mode=y 
    13 Offline_DynTrp=y 
    14 Co2Anthr=n 
    15 AtmCo2=2.8432e+02 
     14AnthrGas=n 
     15AtmCo2=2.78000e+02 
     16AtmN2o=2.74372e+02 
     17AtmCos=3.22225e+02 
    1618OutputLevel=10 
    17 #================================================================================================== 
     19 
    1820[InitialStateFiles] 
    1921List= () 
    2022 
    2123[BoundaryFiles] 
    22 List= () 
     24List=       () 
    2325 
    24 ListNonDel= (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/GRIDS/ORCA2_domain_cfg.nc, domain_cfg.nc), \ 
    25             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/DYNA/dyna_grid_T.nc, .), \ 
    26             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/DYNA/dyna_grid_U.nc, .), \ 
    27             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/DYNA/dyna_grid_V.nc, .), \ 
    28             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/DYNA/dyna_grid_W.nc, .), \ 
    29             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/TDIC_GLODAPv2.1_annual_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/TALK_GLODAPv2.1_annual_r360x180xl31.nc , data_ALK_nomask.nc ), \ 
    31             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/O2_WOA2009_monthly_r360x180xl31.nc     , data_OXY_nomask.nc ), \ 
    32             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/PO4_WOA2009_monthly_r360x180xl31.nc    , data_PO4_nomask.nc ), \ 
    33             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Si_WOA2009_monthly_r360x180xl31.nc     , data_SIL_nomask.nc ), \ 
    34             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/NO3_WOA2009_monthly_r360x180xl31.nc    , data_NO3_nomask.nc ), \ 
    35             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/DOC_PISCES_monthly_r360x180xl31.nc     , data_DOC_nomask.nc ), \ 
    36             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Fer_PISCES_monthly_r360x180xl31.nc     , data_FER_nomask.nc ), \ 
    37             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_orca2_bilinear.nc    , weights_3D_r360x180_bilin.nc ), \ 
    38             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/DUST_INCA_LOI6012-histAER_1M_1850.nc, dust.orca.nc       ), \ 
    39             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/weights_LMD144142_ORCA2_bilinear.nc , weights_lmd144142_bilin.nc ), \ 
    40             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/Ndep_input4MIPs_surfaceFluxes_CMIP_NCAR-CCMI-2-0_gn_185001-185012-clim.nc, ndeposition.orca.nc), \ 
    41             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/weights_CMIP_NCAR-CCMI_ORCA2_bilinear.nc, weights_2d_bilin.nc), \ 
    42             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/pmarge_etopo_ORCA2.nc                    , bathy.orca.nc      ), \ 
    43             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/river_global_news_ORCA2.nc               , river.orca.nc      ), \ 
    44             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/par_fraction_gewex_clim90s00s_ORCA2.nc   , par.orca.nc        ), \ 
    45             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Solubility_T62_Mahowald_ORCA2.nc         , solubility.orca.nc ), \ 
    46             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CFCs_CDIAC.dat                      , CFCs_CDIAC.dat     ), \ 
    47             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CO2_OMIP6_1600_2014.txt             , atcco2.txt         ) 
    48  
     26ListNonDel= (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PiDIC_GLODAPv2_Lauvset2016_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
     27            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/TALK_GLODAPv2_Lauvset2016_r360x180xl31.nc , data_ALK_nomask.nc ), \ 
     28            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/O2_WOA2013_r360x180xl31.nc                , data_OXY_nomask.nc ), \ 
     29            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PO4_WOA2013_r360x180xl31.nc               , data_PO4_nomask.nc ), \ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Si_WOA2013_r360x180xl31.nc                , data_SIL_nomask.nc ), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_annual_r360x180xl31.nc         , data_DOC_nomask.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Fer_FEMIP_model_median_r360x180xl31.nc    , data_FER_nomask.nc ), \ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/NO3_WOA2013_r360x180xl31.nc               , data_NO3_nomask.nc ), \ 
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/N2O_PISCES_annual_r360x180xl31.nc         , data_N2O_nomask.nc ), \ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DMS_PISCES_annual_r360x180xl31.nc         , data_DMS_nomask.nc ), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ISP_PISCES_annual_r360x180xl31.nc         , data_ISP_nomask.nc ), \ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/CO_PISCES_annual_r360x180xl31.nc          , data_CO_nomask.nc  ), \ 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/COS_PISCES_annual_r360x180xl31.nc         , data_COS_nomask.nc ), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_r360x180_bilin.nc ), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_2D_r360x180_bilin.nc ), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_pmarge_etopo.nc                    , pmarge.orca.nc      ), \ 
     42            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
     43            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
     45            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4946 
    5047[ParametersFiles] 
    51 List=   (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_ref                , namelist_ref    ), \ 
    52         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_top_ref            , namelist_top_ref), \ 
    53         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_pisces_ref         , namelist_pisces_ref), \ 
    54         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_trc_ref            , namelist_trc_ref   ), \ 
    55         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/domain_def_nemo.xml         , domain_def_nemo.xml ), \ 
    56         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/axis_def_nemo.xml           , axis_def_nemo.xml   ), \ 
    57         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/grid_def_nemo.xml           , grid_def_nemo.xml  ), \ 
    58         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-oce.xml      , field_def_nemo-oce.xml  ), \ 
    59         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml  ), \ 
    60         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml), \ 
    61         (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_offline_${exptype}_cfg, namelist_cfg ), \ 
    62         (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_top_offline_cfg , namelist_top_cfg   ), \ 
    63         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                , namelist_pisces_cfg), \ 
    64         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                   , namelist_trc_cfg   ), \ 
    65         (${SUBMIT_DIR}/PARAM/XML/context_nemo_offline.xml                , context_nemo.xml   ), \ 
    66         (${SUBMIT_DIR}/PARAM/XML/iodef.xml                               , iodef.xml               ), \ 
    67         (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                   , file_def_nemo-top.xml   ) 
     48List=   (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_top_ref            , namelist_top_ref             ), \ 
     49        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_pisces_ref         , namelist_pisces_ref          ), \ 
     50        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_trc_ref            , namelist_trc_ref             ), \ 
     51        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml    ), \ 
     52        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml ), \ 
     53        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_cfg                                   , namelist_top_p4z_cfg         ), \ 
     54        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_gas_cfg                               , namelist_top_p4z_gas_cfg     ), \ 
     55        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                                    , namelist_pisces_cfg          ), \ 
     56        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                                       , namelist_trc_cfg             ), \ 
     57        (${SUBMIT_DIR}/PARAM/NAMELIST/CFCs_CDIAC.dat                                         , CFCs_CDIAC.dat               ), \ 
     58        (${SUBMIT_DIR}/PARAM/NAMELIST/atmc14.dat                                             , atmc14.dat                   ), \ 
     59        (${SUBMIT_DIR}/PARAM/NAMELIST/splco2.dat                                             , splco2.dat                   ), \ 
     60        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                                       , file_def_nemo-top.xml        ), \ 
     61        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_co2_yearly_2022.txt  , atmco2.txt                   ), \ 
     62        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_n2o_yearly_2022.txt  , atmn2o.txt                   ), \ 
     63        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_cos_yearly_2022.txt  , atmcos.txt                   ) 
    6864 
    6965 
    … …  
    7268 
    7369[OutputText] 
    74 List=   (ocean.output, namelist_top_ref, namelist_top_cfg, namelist_pisces_ref, namelist_pisces_cfg, tracer.stat) 
     70List=   (namelist_top_ref, namelist_top_cfg, namelist_pisces_ref, namelist_pisces_cfg, tracer.stat) 
    7571 
    7672 
    … …  
    8177        (${config_UserChoices_JobName}_1y_CFC11.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC11.nc     , NONE ) , \ 
    8278        (${config_UserChoices_JobName}_1y_CFC12.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC12.nc     , NONE ) , \ 
     79        (${config_UserChoices_JobName}_1y_SF6.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_SF6.nc       , NONE ) , \ 
     80        (${config_UserChoices_JobName}_1y_C14.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_C14.nc       , NONE ) , \ 
     81        (${config_UserChoices_JobName}_1y_gas.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_gas.nc       , NONE ) , \ 
    8382        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    8483        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , NONE   ) , \ 
    8584        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , NONE   ) , \ 
     85        (${config_UserChoices_JobName}_1m_gas.nc           , ${R_OUT_MBG_O_M}/${PREFIX}_1M_gas.nc       , NONE   ) , \ 
    8686        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    8787 
    88  
    89 [Post_1D_bioscalar] 
    90 Patches = () 
    91 GatherWithInternal = (time_counter, time_instant, time_instant_bounds) 
    92 TimeSeriesVars2D = (pno3tot, ppo4tot, psiltot, palktot, pfertot, tcflx, tcflxcum, tcexp, tintpp, tnfix, tdenit) 
    93 ChunckJob2D = NONE 
    94 TimeSeriesVars3D = () 
    95 ChunckJob3D = NONE 
    96 Seasonal=OFF 
    9788 
    9889[Post_1M_bioscalar] 
    … …  
    109100GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    110101TimeSeriesVars2D = () 
    111 ChunckJob2D = 50Y 
    112 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si) 
    113 ChunckJob3D = 50Y 
    114 Seasonal=ON 
     102ChunckJob2D = NONE 
     103TimeSeriesVars3D = () 
     104ChunckJob3D = NONE 
     105Seasonal=OFF 
    115106 
    116107[Post_1M_diad_T] 
    117108Patches = () 
    118109GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    119 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) 
    120 ChunckJob2D = 50Y 
    121 TimeSeriesVars3D = (TPP) 
    122 ChunckJob3D = 50Y 
    123 Seasonal=ON 
    124  
    125 [Post_1Y_ptrc_T] 
    126 Patches = () 
    127 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    128 TimeSeriesVars2D = () 
    129 ChunckJob2D = OFF 
    130 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si, POC, GOC, DOC) 
     110TimeSeriesVars2D = (Cflx, Dpco2) 
     111ChunckJob2D = 100Y 
     112TimeSeriesVars3D = () 
    131113ChunckJob3D = NONE 
    132114Seasonal=OFF 
    133115 
    134 [Post_1Y_diad_T] 
     116[Post_1M_gas] 
    135117Patches = () 
    136118GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    137 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup,  Nfix) 
    138 ChunckJob2D = 50Y 
    139 TimeSeriesVars3D = (PAR, TPP) 
    140 ChunckJob3D = 50Y 
     119TimeSeriesVars2D = (N2Oflx, Dpn2o, DMSflx, COSflx, COflx, ISPflx) 
     120ChunckJob2D = 100Y 
     121TimeSeriesVars3D = () 
     122ChunckJob3D = NONE 
    141123Seasonal=OFF 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_OFF_PISCES/ia/COMP/pisces.card

    r6400 r6601  
    33 
    44[UserChoices] 
    5 #============================================================== 
    6 ORCA_version=ORCA2.4 
    75pis=y 
     6gas=n 
    87age=n 
    98cfc11=n 
    109cfc12=n 
     10sf6=n 
     11c14=n 
     12Offline_Mode=y 
    1113PisFreq=4 
    12 Offline_Mode=y 
    13 Offline_DynTrp=n 
    14 Co2Anthr=n 
    15 AtmCo2=2.8432e+02 
     14AnthrGas=n 
     15AtmCo2=2.78000e+02 
     16AtmN2o=2.74372e+02 
     17AtmCos=3.22225e+02 
    1618OutputLevel=10 
    17 # 
    18 R_DYN=/ccc/store/cont003/dsm/p86caub/dmf_import/IGCM_OUT/IPSLCM5A/PROD/piControl/piControl2/OCE/Output/MO 
    19 DynName=piControl2 
    20 DynFreq=1M 
    21 DynFiles=(grid_T grid_U grid_V grid_W) 
    22 DynRunName=dyna 
    23 DynYearStart=1850 
    24 DynYearEnd=2000 
    25 #================================================================================================== 
     19 
    2620[InitialStateFiles] 
    2721List= () 
    2822 
    2923[BoundaryFiles] 
    30 List= () 
     24List=       () 
    3125 
    32 ListNonDel= (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/GRIDS/ORCA2_CM5_domain_cfg.nc, domain_cfg.nc), \ 
    33             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/TDIC_GLODAPv2.1_annual_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
    34             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/TALK_GLODAPv2.1_annual_r360x180xl31.nc , data_ALK_nomask.nc ), \ 
    35             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/O2_WOA2009_monthly_r360x180xl31.nc     , data_OXY_nomask.nc ), \ 
    36             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/PO4_WOA2009_monthly_r360x180xl31.nc    , data_PO4_nomask.nc ), \ 
    37             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Si_WOA2009_monthly_r360x180xl31.nc     , data_SIL_nomask.nc ), \ 
    38             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/NO3_WOA2009_monthly_r360x180xl31.nc    , data_NO3_nomask.nc ), \ 
    39             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/DOC_PISCES_monthly_r360x180xl31.nc     , data_DOC_nomask.nc ), \ 
    40             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Fer_PISCES_monthly_r360x180xl31.nc     , data_FER_nomask.nc ), \ 
    41             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_orca2_bilinear.nc    , weights_3D_r360x180_bilin.nc ), \ 
    42             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/DUST_INCA_LOI6012-histAER_1M_1850.nc, dust.orca.nc       ), \ 
    43             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Dust_inca_LOI/weights_LMD144142_ORCA2_bilinear.nc , weights_lmd144142_bilin.nc ), \ 
    44             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/Ndep_input4MIPs_surfaceFluxes_CMIP_NCAR-CCMI-2-0_gn_185001-185012-clim.nc, ndeposition.orca.nc), \ 
    45             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Ndep_input4MIPs/weights_CMIP_NCAR-CCMI_ORCA2_bilinear.nc, weights_2d_bilin.nc), \ 
    46             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/pmarge_etopo_ORCA2.nc                    , bathy.orca.nc      ), \ 
    47             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/river_global_news_ORCA2.nc               , river.orca.nc      ), \ 
    48             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/par_fraction_gewex_clim90s00s_ORCA2.nc   , par.orca.nc        ), \ 
    49             (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Solubility_T62_Mahowald_ORCA2.nc         , solubility.orca.nc ), \ 
    50             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CFCs_CDIAC.dat                      , CFCs_CDIAC.dat     ), \ 
    51             (${R_IN}/OCE/NEMO/FORCINGS/GHG/CO2_OMIP6_1600_2014.txt             , atcco2.txt         ) 
    52  
     26ListNonDel= (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PiDIC_GLODAPv2_Lauvset2016_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
     27            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/TALK_GLODAPv2_Lauvset2016_r360x180xl31.nc , data_ALK_nomask.nc ), \ 
     28            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/O2_WOA2013_r360x180xl31.nc                , data_OXY_nomask.nc ), \ 
     29            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PO4_WOA2013_r360x180xl31.nc               , data_PO4_nomask.nc ), \ 
     30            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Si_WOA2013_r360x180xl31.nc                , data_SIL_nomask.nc ), \ 
     31            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_annual_r360x180xl31.nc         , data_DOC_nomask.nc ), \ 
     32            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Fer_FEMIP_model_median_r360x180xl31.nc    , data_FER_nomask.nc ), \ 
     33            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/NO3_WOA2013_r360x180xl31.nc               , data_NO3_nomask.nc ), \ 
     34            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/N2O_PISCES_annual_r360x180xl31.nc         , data_N2O_nomask.nc ), \ 
     35            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DMS_PISCES_annual_r360x180xl31.nc         , data_DMS_nomask.nc ), \ 
     36            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ISP_PISCES_annual_r360x180xl31.nc         , data_ISP_nomask.nc ), \ 
     37            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/CO_PISCES_annual_r360x180xl31.nc          , data_CO_nomask.nc  ), \ 
     38            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/COS_PISCES_annual_r360x180xl31.nc         , data_COS_nomask.nc ), \ 
     39            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_r360x180_bilin.nc ), \ 
     40            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_2D_r360x180_bilin.nc ), \ 
     41            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_pmarge_etopo.nc                    , pmarge.orca.nc      ), \ 
     42            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
     43            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
     45            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    5346 
    5447[ParametersFiles] 
    55 List=   (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_ref                , namelist_ref    ), \ 
    56         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_top_ref            , namelist_top_ref), \ 
    57         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_pisces_ref         , namelist_pisces_ref), \ 
    58         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_trc_ref            , namelist_trc_ref   ), \ 
    59         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/domain_def_nemo.xml         , domain_def_nemo.xml ), \ 
    60         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/axis_def_nemo.xml           , axis_def_nemo.xml   ), \ 
    61         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/grid_def_nemo.xml           , grid_def_nemo.xml  ), \ 
    62         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-oce.xml      , field_def_nemo-oce.xml  ), \ 
    63         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml  ), \ 
    64         (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml), \ 
    65         (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_offline_${exptype}_cfg, namelist_cfg ), \ 
    66         (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_top_offline_cfg, namelist_top_cfg   ), \ 
    67         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                , namelist_pisces_cfg), \ 
    68         (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                   , namelist_trc_cfg   ), \ 
    69         (${SUBMIT_DIR}/PARAM/XML/context_nemo_offline.xml                , context_nemo.xml   ), \ 
    70         (${SUBMIT_DIR}/PARAM/XML/iodef.xml                               , iodef.xml               ), \ 
    71         (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                   , file_def_nemo-top.xml   ) 
     48List=   (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_top_ref            , namelist_top_ref             ), \ 
     49        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_pisces_ref         , namelist_pisces_ref          ), \ 
     50        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_trc_ref            , namelist_trc_ref             ), \ 
     51        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml    ), \ 
     52        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml ), \ 
     53        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_cfg                                   , namelist_top_p4z_cfg         ), \ 
     54        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_gas_cfg                               , namelist_top_p4z_gas_cfg     ), \ 
     55        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_pisces_cfg                                    , namelist_pisces_cfg          ), \ 
     56        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_trc_cfg                                       , namelist_trc_cfg             ), \ 
     57        (${SUBMIT_DIR}/PARAM/NAMELIST/CFCs_CDIAC.dat                                         , CFCs_CDIAC.dat               ), \ 
     58        (${SUBMIT_DIR}/PARAM/NAMELIST/atmc14.dat                                             , atmc14.dat                   ), \ 
     59        (${SUBMIT_DIR}/PARAM/NAMELIST/splco2.dat                                             , splco2.dat                   ), \ 
     60        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                                       , file_def_nemo-top.xml        ), \ 
     61        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_co2_yearly_2022.txt  , atmco2.txt                   ), \ 
     62        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_n2o_yearly_2022.txt  , atmn2o.txt                   ), \ 
     63        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_cos_yearly_2022.txt  , atmcos.txt                   ) 
    7264 
    7365 
    … …  
    7668 
    7769[OutputText] 
    78 List=   (ocean.output, namelist_top_ref, namelist_top_cfg, namelist_pisces_ref, namelist_pisces_cfg, tracer.stat) 
     70List=   (namelist_top_ref, namelist_top_cfg, namelist_pisces_ref, namelist_pisces_cfg, tracer.stat) 
    7971 
    8072 
    … …  
    8577        (${config_UserChoices_JobName}_1y_CFC11.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC11.nc     , NONE ) , \ 
    8678        (${config_UserChoices_JobName}_1y_CFC12.nc         , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_CFC12.nc     , NONE ) , \ 
     79        (${config_UserChoices_JobName}_1y_SF6.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_SF6.nc       , NONE ) , \ 
     80        (${config_UserChoices_JobName}_1y_C14.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_C14.nc       , NONE ) , \ 
     81        (${config_UserChoices_JobName}_1y_gas.nc           , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_gas.nc       , NONE ) , \ 
    8782        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    8883        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , NONE   ) , \ 
    8984        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , NONE   ) , \ 
     85        (${config_UserChoices_JobName}_1m_gas.nc           , ${R_OUT_MBG_O_M}/${PREFIX}_1M_gas.nc       , NONE   ) , \ 
    9086        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    9187 
    92  
    93 [Post_1D_bioscalar] 
    94 Patches = () 
    95 GatherWithInternal = (time_counter, time_instant, time_instant_bounds) 
    96 TimeSeriesVars2D = (pno3tot, ppo4tot, psiltot, palktot, pfertot, tcflx, tcflxcum, tcexp, tintpp, tnfix, tdenit) 
    97 ChunckJob2D = NONE 
    98 TimeSeriesVars3D = () 
    99 ChunckJob3D = NONE 
    100 Seasonal=OFF 
    10188 
    10289[Post_1M_bioscalar] 
    … …  
    113100GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    114101TimeSeriesVars2D = () 
    115 ChunckJob2D = 50Y 
    116 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si) 
    117 ChunckJob3D = 50Y 
    118 Seasonal=ON 
     102ChunckJob2D = NONE 
     103TimeSeriesVars3D = () 
     104ChunckJob3D = NONE 
     105Seasonal=OFF 
    119106 
    120107[Post_1M_diad_T] 
    121108Patches = () 
    122109GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    123 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) 
    124 ChunckJob2D = 50Y 
    125 TimeSeriesVars3D = (TPP) 
    126 ChunckJob3D = 50Y 
    127 Seasonal=ON 
    128  
    129 [Post_1Y_ptrc_T] 
    130 Patches = () 
    131 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    132 TimeSeriesVars2D = () 
    133 ChunckJob2D = OFF 
    134 TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si, POC, GOC, DOC) 
     110TimeSeriesVars2D = (Cflx, Dpco2) 
     111ChunckJob2D = 100Y 
     112TimeSeriesVars3D = () 
    135113ChunckJob3D = NONE 
    136114Seasonal=OFF 
    137115 
    138 [Post_1Y_diad_T] 
     116[Post_1M_gas] 
    139117Patches = () 
    140118GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    141 TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup,  Nfix) 
    142 ChunckJob2D = 50Y 
    143 TimeSeriesVars3D = (PAR, TPP) 
    144 ChunckJob3D = 50Y 
     119TimeSeriesVars2D = (N2Oflx, Dpn2o, DMSflx, COSflx, COflx, ISPflx) 
     120ChunckJob2D = 100Y 
     121TimeSeriesVars3D = () 
     122ChunckJob3D = NONE 
    145123Seasonal=OFF 
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