Changeset 6618


Ignore:
Timestamp:
09/06/23 18:03:34 (8 months ago)
Author:
cetlod
Message:

NEMOv6.5 : Switch to NEMOv4.2.1 and PISCES gas, continuation

Location:
CONFIG/UNIFORM/v6/NEMO_v6.5
Files:
28 edited

Legend:

Unmodified
Added
Removed

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/core/clim/config.card

    r6601 r6618  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 557MPI) 
     58OCE= (opa_top_online_${OptMode}.exe, nemo, 557MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/core/ia/COMP/pisces.card

    r6601 r6618  
    4242            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
    4343            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4445            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
    45             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4646 
    4747[ParametersFiles] 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/core/ia/config.card

    r6601 r6618  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 557MPI) 
     58OCE= (opa_top_online_${OptMode}.exe, nemo, 557MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_PISCES/jra/ia/config.card

    r6601 r6618  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 557MPI) 
     58OCE= (opa_top_online_${OptMode}.exe, nemo, 557MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_TRC/core/clim/COMP/trc.card

    r6601 r6618  
    55pis=n 
    66age=y 
    7 cfc11=n 
     7cfc11=y 
    88cfc12=n 
    99sf6=n 
    10 c14=n 
     10c14=y 
    1111OutputLevel=10 
    1212 
    … …  
    2222[ParametersFiles] 
    2323List=   (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_top_ref            , namelist_top_ref             ), \ 
     24        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_trc_ref            , namelist_trc_ref             ), \ 
    2425        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml    ), \ 
    2526        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml ), \ 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_TRC/core/clim/config.card

    r6601 r6618  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 557MPI) 
     58OCE= (opa_top_online_${OptMode}.exe, nemo, 557MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_TRC/core/ia/COMP/trc.card

    r6601 r6618  
    55pis=n 
    66age=y 
    7 cfc11=n 
     7cfc11=y 
    88cfc12=n 
    99sf6=n 
    10 c14=n 
     10c14=y 
    1111OutputLevel=10 
    1212 
    … …  
    2222[ParametersFiles] 
    2323List=   (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_top_ref            , namelist_top_ref             ), \ 
     24        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_trc_ref            , namelist_trc_ref             ), \ 
    2425        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml    ), \ 
    2526        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml ), \ 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_TRC/core/ia/config.card

    r6601 r6618  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 557MPI) 
     58OCE= (opa_top_online_${OptMode}.exe, nemo, 557MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_TRC/jra/ia/COMP/trc.card

    r6601 r6618  
    55pis=n 
    66age=y 
    7 cfc11=n 
     7cfc11=y 
    88cfc12=n 
    99sf6=n 
    10 c14=n 
     10c14=y 
    1111OutputLevel=10 
    1212 
    … …  
    2222[ParametersFiles] 
    2323List=   (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_top_ref            , namelist_top_ref             ), \ 
     24        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_trc_ref            , namelist_trc_ref             ), \ 
    2425        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml    ), \ 
    2526        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml ), \ 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA1_ICE_TRC/jra/ia/config.card

    r6601 r6618  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 557MPI) 
     58OCE= (opa_top_online_${OptMode}.exe, nemo, 557MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/core/clim/COMP/pisces.card

    r6601 r6618  
    4242            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
    4343            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4445            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
    45             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4646 
    4747[ParametersFiles] 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/core/clim/config.card

    r6601 r6618  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 118MPI) 
     58OCE= (opa_top_online_${OptMode}.exe, nemo, 118MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/core/ia/COMP/pisces.card

    r6601 r6618  
    4242            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
    4343            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4445            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
    45             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4646 
    4747[ParametersFiles] 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/core/ia/config.card

    r6601 r6618  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 118MPI) 
     58OCE= (opa_top_online_${OptMode}.exe, nemo, 118MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/jra/ia/COMP/pisces.card

    r6601 r6618  
    4242            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
    4343            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4445            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
    45             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4646 
    4747[ParametersFiles] 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_ICE_PISCES/jra/ia/config.card

    r6601 r6618  
    5656Name=nemo 
    5757#D- For each component, Real name of executable 
    58 OCE= (opa_online_${OptMode}.exe, nemo, 118MPI) 
     58OCE= (opa_top_online_${OptMode}.exe, nemo, 118MPI) 
    5959ICE= ("", "", "") 
    6060MBG= ("", "", "") 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_OFF_PISCES/clim/COMP/pisces.card

    r6601 r6618  
    33 
    44[UserChoices] 
     5ORCA_version=ORCA2.4.2 
    56pis=y 
    67gas=n 
    … …  
    1112c14=n 
    1213Offline_Mode=y 
     14diurnal_cycle=n 
    1315PisFreq=4 
    1416AnthrGas=n 
    … …  
    2426List=       () 
    2527 
    26 ListNonDel= (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PiDIC_GLODAPv2_Lauvset2016_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
    27             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/TALK_GLODAPv2_Lauvset2016_r360x180xl31.nc , data_ALK_nomask.nc ), \ 
    28             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/O2_WOA2013_r360x180xl31.nc                , data_OXY_nomask.nc ), \ 
    29             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/PO4_WOA2013_r360x180xl31.nc               , data_PO4_nomask.nc ), \ 
    30             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Si_WOA2013_r360x180xl31.nc                , data_SIL_nomask.nc ), \ 
    31             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DOC_PISCES_annual_r360x180xl31.nc         , data_DOC_nomask.nc ), \ 
    32             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/Fer_FEMIP_model_median_r360x180xl31.nc    , data_FER_nomask.nc ), \ 
    33             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/NO3_WOA2013_r360x180xl31.nc               , data_NO3_nomask.nc ), \ 
    34             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/N2O_PISCES_annual_r360x180xl31.nc         , data_N2O_nomask.nc ), \ 
    35             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DMS_PISCES_annual_r360x180xl31.nc         , data_DMS_nomask.nc ), \ 
    36             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ISP_PISCES_annual_r360x180xl31.nc         , data_ISP_nomask.nc ), \ 
    37             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/CO_PISCES_annual_r360x180xl31.nc          , data_CO_nomask.nc  ), \ 
    38             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/COS_PISCES_annual_r360x180xl31.nc         , data_COS_nomask.nc ), \ 
    39             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_3D_r360x180_bilin.nc ), \ 
    40             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${opa9_UserChoices_ORCA_version}_bilinear.nc, weights_2D_r360x180_bilin.nc ), \ 
    41             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_pmarge_etopo.nc                    , pmarge.orca.nc      ), \ 
    42             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
    43             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
    44             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
    45             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
     28ListNonDel= (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/GRIDS/${pisces_UserChoices_ORCA_version}_domain_cfg.nc, domain_cfg.nc), \ 
     29            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/DYNA/dyna_grid_T.nc, .), \ 
     30            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/DYNA/dyna_grid_U.nc, .), \ 
     31            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/DYNA/dyna_grid_V.nc, .), \ 
     32            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/DYNA/dyna_grid_W.nc, .), \ 
     33            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/PiDIC_GLODAPv2_Lauvset2016_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
     34            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/TALK_GLODAPv2_Lauvset2016_r360x180xl31.nc , data_ALK_nomask.nc ), \ 
     35            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/O2_WOA2013_r360x180xl31.nc                , data_OXY_nomask.nc ), \ 
     36            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/PO4_WOA2013_r360x180xl31.nc               , data_PO4_nomask.nc ), \ 
     37            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Si_WOA2013_r360x180xl31.nc                , data_SIL_nomask.nc ), \ 
     38            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/DOC_PISCES_annual_r360x180xl31.nc         , data_DOC_nomask.nc ), \ 
     39            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/Fer_FEMIP_model_median_r360x180xl31.nc    , data_FER_nomask.nc ), \ 
     40            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/NO3_WOA2013_r360x180xl31.nc               , data_NO3_nomask.nc ), \ 
     41            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/N2O_PISCES_annual_r360x180xl31.nc         , data_N2O_nomask.nc ), \ 
     42            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/DMS_PISCES_annual_r360x180xl31.nc         , data_DMS_nomask.nc ), \ 
     43            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/ISP_PISCES_annual_r360x180xl31.nc         , data_ISP_nomask.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/CO_PISCES_annual_r360x180xl31.nc          , data_CO_nomask.nc  ), \ 
     45            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/COS_PISCES_annual_r360x180xl31.nc         , data_COS_nomask.nc ), \ 
     46            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${pisces_UserChoices_ORCA_version}_bilinear.nc, weights_3D_r360x180_bilin.nc ), \ 
     47            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/weights_3D_r360x180_${pisces_UserChoices_ORCA_version}_bilinear.nc, weights_2D_r360x180_bilin.nc ), \ 
     48            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/${pisces_UserChoices_ORCA_version}_pmarge_etopo.nc                    , pmarge.orca.nc      ), \ 
     49            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/${pisces_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
     50            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/${pisces_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     51            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
     52            (${R_IN}/OCE/NEMO/${pisces_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
     53 
    4654 
    4755[ParametersFiles] 
    48 List=   (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_top_ref            , namelist_top_ref             ), \ 
     56List=   (${MODIPSL}/modeles/NEMO/cfgs/SHARED/namelist_ref                                    , namelist_ref                 ), \ 
     57        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_top_ref            , namelist_top_ref             ), \ 
    4958        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_pisces_ref         , namelist_pisces_ref          ), \ 
    5059        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/namelist_trc_ref            , namelist_trc_ref             ), \ 
     60        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/domain_def_nemo.xml                             , domain_def_nemo.xml          ), \ 
     61        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/axis_def_nemo.xml                               , axis_def_nemo.xml            ), \ 
     62        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/grid_def_nemo.xml                               , grid_def_nemo.xml            ), \ 
     63        (${MODIPSL}/modeles/NEMO/cfgs/SHARED/field_def_nemo-oce.xml                          , field_def_nemo-oce.xml       ), \ 
    5164        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-pisces.xml   , field_def_nemo-pisces.xml    ), \ 
    5265        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/field_def_nemo-innerttrc.xml, field_def_nemo-innerttrc.xml ), \ 
     66        (${SUBMIT_DIR}/PARAM/NAMELIST/${RESOL_OCE}/namelist_offline_${exptype}_cfg           , namelist_cfg                 ), \ 
    5367        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_cfg                                   , namelist_top_p4z_cfg         ), \ 
    5468        (${SUBMIT_DIR}/PARAM/NAMELIST/namelist_top_p4z_gas_cfg                               , namelist_top_p4z_gas_cfg     ), \ 
    … …  
    5872        (${SUBMIT_DIR}/PARAM/NAMELIST/atmc14.dat                                             , atmc14.dat                   ), \ 
    5973        (${SUBMIT_DIR}/PARAM/NAMELIST/splco2.dat                                             , splco2.dat                   ), \ 
     74        (${SUBMIT_DIR}/PARAM/XML/context_nemo_offline.xml                                    , context_nemo.xml             ), \ 
     75        (${SUBMIT_DIR}/PARAM/XML/iodef.xml                                                   , iodef.xml                    ), \ 
    6076        (${SUBMIT_DIR}/PARAM/XML/file_def_nemo-top.xml                                       , file_def_nemo-top.xml        ), \ 
    6177        (${MODIPSL}/modeles/NEMO/cfgs/ORCA_ICE_PISCES_GAS/EXPREF/global_co2_yearly_2022.txt  , atmco2.txt                   ), \ 
    … …  
    6884 
    6985[OutputText] 
    70 List=   (namelist_top_ref, namelist_top_cfg, namelist_pisces_ref, namelist_pisces_cfg, tracer.stat) 
     86List=   (namelist_ref, namelist_cfg, namelist_top_ref, namelist_top_cfg, namelist_pisces_ref, namelist_pisces_cfg, ocean.output, tracer.stat) 
    7187 
    7288 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_OFF_PISCES/clim/config.card

    r5535 r6618  
    5252[Executable] 
    5353Name=nemo 
    54 MBG= (opa_offline_${OptMode}.exe, nemo, 30MPI) 
     54MBG= (opa_top_offline_${OptMode}.exe, nemo, 30MPI) 
    5555IOS= (xios_server_${OptMode}.exe, xios.x, 1MPI) 
    5656#======================================================================== 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_OFF_PISCES/ia/COMP/pisces.card

    r6601 r6618  
    4242            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_river_global_news.nc               , river.orca.nc      ), \ 
    4343            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/${opa9_UserChoices_ORCA_version}_par_fraction_gewex_clim90s00s.nc   , par_fraction.orca.nc ), \ 
     44            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4445            (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/DUST_INCA_r360x180.new.nc                 , dustdep.nc       ) 
    45             (${R_IN}/OCE/NEMO/${opa9_UserChoices_ORCA_version}/PISCES/ndeposition_Duce_annual_eORCA1-r360x180.nc, nitdep.nc), \ 
    4646 
    4747[ParametersFiles] 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/EXPERIMENTS/ORCA2_OFF_PISCES/ia/config.card

    r5535 r6618  
    5252[Executable] 
    5353Name=nemo 
    54 MBG= (opa_offline_${OptMode}.exe, nemo, 30MPI) 
     54MBG= (opa_top_offline_${OptMode}.exe, nemo, 30MPI) 
    5555IOS= (xios_server_${OptMode}.exe, xios.x, 1MPI) 
    5656#======================================================================== 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/GENERAL/DRIVER/pisces.driver

    r6601 r6618  
    182182 
    183183   if [ X"${pisces_UserChoices_pis}" = X"y" ] ; then 
    184       echo "DeActivate pisces outputs" 
    185       IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file31 enabled .TRUE. 
    186       IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file32 enabled .TRUE. 
    187       IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file33 enabled .TRUE. 
    188       IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file34 enabled .TRUE. 
    189       IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file35 enabled .TRUE. 
    190       IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file36 enabled .TRUE. 
    191       IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file37 enabled .TRUE. 
     184      echo "Activate pisces outputs" 
     185      [ ${VT1D_ENABLE} = ".TRUE." ] && IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file31 enabled .TRUE. 
     186      [ ${VT5D_ENABLE} = ".TRUE." ] && IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file32 enabled .TRUE. 
     187      [ ${VT1M_ENABLE} = ".TRUE." ] && IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file33 enabled .TRUE. 
     188      [ ${VT1M_ENABLE} = ".TRUE." ] && IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file34 enabled .TRUE. 
     189      [ ${VT1M_ENABLE} = ".TRUE." ] && IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file35 enabled .TRUE. 
     190      [ ${VT1Y_ENABLE} = ".TRUE." ] && IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file36 enabled .TRUE. 
     191      [ ${VT1Y_ENABLE} = ".TRUE." ] && IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file37 enabled .TRUE. 
    192192   fi 
    193193 
    … …  
    239239      LGAS=.TRUE. 
    240240      cp namelist_top_p4z_gas_cfg  namelist_top_cfg 
    241       IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file50 enabled .TRUE. 
    242       IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file51 enabled .TRUE. 
     241      [ ${VT1M_ENABLE} = ".TRUE." ] && IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file60 enabled .TRUE. 
     242      [ ${VT1Y_ENABLE} = ".TRUE." ] && IGCM_comp_modifyXmlFile force file_def_nemo-top.xml file61 enabled .TRUE. 
    243243   fi 
    244244## 
    … …  
    272272         PisCos=${pisces_UserChoices_AtmCos} 
    273273    fi 
     274 
     275    # Manage the diurnal cycle in TOP 
     276    if [ X"${pisces_UserChoices_diurnal_cycle}" = X"y" ] ; then 
     277       TOP_LDCY=.TRUE. 
     278    else 
     279       TOP_LDCY=.FALSE. 
     280    fi 
     281 
    274282   ##-- Update namelist_top_cfg and namelist_pisces_cfg 
    275     IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_rsttr  ${TOP_LRSTTR} 
    276     IGCM_comp_modifyNamelist blocker    namelist_top_cfg     nn_rsttr  ${TOP_NRSTTR} 
    277     IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_age    ${TOP_AGE} 
    278     IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_cfc11  ${TOP_CFC11} 
    279     IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_cfc12  ${TOP_CFC12} 
    280     IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_sf6    ${TOP_SF6} 
    281     IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_c14    ${TOP_C14} 
     283    IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_rsttr    ${TOP_LRSTTR} 
     284    IGCM_comp_modifyNamelist blocker    namelist_top_cfg     nn_rsttr    ${TOP_NRSTTR} 
     285    IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_age      ${TOP_AGE} 
     286    IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_cfc11    ${TOP_CFC11} 
     287    IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_cfc12    ${TOP_CFC12} 
     288    IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_sf6      ${TOP_SF6} 
     289    IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_c14      ${TOP_C14} 
     290    IGCM_comp_modifyNamelist blocker    namelist_top_cfg     ln_trcdc2dm ${TOP_LDCY} 
    282291    if [ X"${pisces_UserChoices_pis}" = X"y" ] ; then 
    283292       IGCM_comp_modifyNamelist blocker    namelist_pisces_cfg  atcco2    ${PisCo2} 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/GENERAL/PARAM/NAMELIST/ORCA2/namelist_offline_clim_cfg

    r6601 r6618  
    308308&namdta_dyn    !   offline ocean input files                            (OFF_SRC only) 
    309309!----------------------------------------------------------------------- 
     310   ln_dyntrp       =  .true.    !  runoffs option enabled (T) or not (F) 
    310311   ln_dynrnf       =  .false.    !  runoffs option enabled (T) or not (F) 
    311312   ln_dynrnf_depth =  .false.    !  runoffs is spread in vertical (T) or not (F) 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/GENERAL/PARAM/NAMELIST/ORCA2/namelist_offline_ia_cfg

    r6601 r6618  
    181181&namdta_dyn    !   offline ocean input files                            (OFF_SRC only) 
    182182!----------------------------------------------------------------------- 
     183   ln_dyntrp       =  .true.    !  runoffs option enabled (T) or not (F) 
    183184   ln_dynrnf       =  .false.    !  runoffs option enabled (T) or not (F) 
    184185   ln_dynrnf_depth =  .false.    !  runoffs is spread in vertical (T) or not (F) 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/GENERAL/PARAM/NAMELIST/namelist_top_innert_cfg

    r6601 r6618  
    5555/ 
    5656!----------------------------------------------------------------------- 
     57&namtrc_dcy      !  Diurnal cycle 
     58!----------------------------------------------------------------------- 
     59/ 
     60!----------------------------------------------------------------------- 
    5761&namtrc_ice      !    Representation of sea ice growth & melt effects 
    5862!----------------------------------------------------------------------- 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/GENERAL/PARAM/NAMELIST/namelist_top_p4z_cfg

    r6601 r6618  
    101101&namtrc_dcy      !  Diurnal cycle 
    102102!----------------------------------------------------------------------- 
    103    ln_trcdc2dm   =  .true.   !  Diurnal cycle for TOP 
     103   ln_trcdc2dm   = _AUTO_: DEFAULT=.TRUE.   !  Diurnal cycle for TOP 
    104104/ 
    105105!----------------------------------------------------------------------- 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/GENERAL/PARAM/NAMELIST/namelist_top_p4z_gas_cfg

    r6601 r6618  
    5151   sn_tracer(24)  = 'NH4     ' , 'Ammonium Concentration                 ',  'mol-C/L' , .false. , .false., .false., .false. , .false. 
    5252   sn_tracer(25)  = 'N2O     ' , 'Nitrous Oxide Concentration            ',  'mol-N/L' , .true.  , .false., .false., .false. , .false. 
    53    sn_tracer(26)  = 'DMS     ' , 'Dimethylsulfide Concentration          ',  'mol-S/L' , .false. , .false., .false., .false. , .false. 
    54    sn_tracer(27)  = 'CO      ' , 'Carbon Monoxide Concentration          ',  'mol-C/L' , .false. , .false., .false., .false. , .false. 
    55    sn_tracer(28)  = 'ISP     ' , 'Isoprene Concentration                 ',  'mol-C/L' , .false. , .false., .false., .false. , .false. 
    56    sn_tracer(29)  = 'COS     ' , 'Carbonyl Sulfide Concentration         ',  'mol-C/L' , .false. , .false., .false., .false. , .false. 
     53   sn_tracer(26)  = 'DMS     ' , 'Dimethylsulfide Concentration          ',  'mol-S/L' , .true. , .false., .false., .false. , .false. 
     54   sn_tracer(27)  = 'CO      ' , 'Carbon Monoxide Concentration          ',  'mol-C/L' , .true. , .false., .false., .false. , .false. 
     55   sn_tracer(28)  = 'ISP     ' , 'Isoprene Concentration                 ',  'mol-C/L' , .true. , .false., .false., .false. , .false. 
     56   sn_tracer(29)  = 'COS     ' , 'Carbonyl Sulfide Concentration         ',  'mol-C/L' , .true. , .false., .false., .false. , .false. 
    5757/ 
    5858!----------------------------------------------------------------------- 
    … …  
    7878   sn_trcdta(28) = 'data_ISP_nomask.nc',        -12        ,  'ISP'     ,    .false.   , .true. , 'yearly'  , 'weights_3D_r360x180_bilin.nc'       , ''   , '' 
    7979   sn_trcdta(29) = 'data_COS_nomask.nc',        -12        ,  'COS'     ,    .false.   , .true. , 'yearly'  , 'weights_3D_r360x180_bilin.nc'       , ''   , '' 
    80    rn_trfac(1)   =   1.028e-06   !  multiplicative factor 
    81    rn_trfac(2)   =   1.028e-06   !  -      -      -     - 
    82    rn_trfac(3)   =  44.6e-06     !  -      -      -     - 
    83    rn_trfac(5)   = 117.0e-06     !  -      -      -     - 
    84    rn_trfac(7)   =   1.0e-06     !  -      -      -     - 
    85    rn_trfac(10)  =   1.0e-06     !  -      -      -     - 
    86    rn_trfac(14)  =   1.0e-06     !  -      -      -     - 
    87    rn_trfac(23)  =   7.3125e-06  !  -      -      -     - 
    88    rn_trfac(25)  =   1.0e-06     !  -      -      -     - 
    89    rn_trfac(26)  =   1.0e-06     !  -      -      -     - 
    90    rn_trfac(27)  =   1.0e-06     !  -      -      -     - 
    91    rn_trfac(28)  =   1.0e-06     !  -      -      -     - 
    92    rn_trfac(29)  =   1.0e-06     !  -      -      -     - 
     80   rn_trfac(1)   =    1.028e-06   !  multiplicative factor 
     81   rn_trfac(2)   =    1.028e-06   !  -      -      -     - 
     82   rn_trfac(3)   =     44.6e-06   !  -      -      -     - 
     83   rn_trfac(5)   =    117.0e-06   !  -      -      -     - 
     84   rn_trfac(7)   =      1.0e-06   !  -      -      -     - 
     85   rn_trfac(10)  =      1.0e-06   !  -      -      -     - 
     86   rn_trfac(14)  =      1.0e-06   !  -      -      -     - 
     87   rn_trfac(23)  =   7.3125e-06   !  -      -      -     - 
     88   rn_trfac(25)  =      1.0e-06   !  -      -      -     - 
     89   rn_trfac(26)  =      1.0e-06   !  -      -      -     - 
     90   rn_trfac(27)  =      1.0e-06   !  -      -      -     - 
     91   rn_trfac(28)  =      1.0e-06   !  -      -      -     - 
     92   rn_trfac(29)  =      1.0e-06   !  -      -      -     - 
    9393/ 
    9494!----------------------------------------------------------------------- 
    … …  
    115115&namtrc_dcy      !  Diurnal cycle 
    116116!----------------------------------------------------------------------- 
    117    ln_trcdc2dm   =  .true.   !  Diurnal cycle for TOP 
     117   ln_trcdc2dm   = _AUTO_: DEFAULT=.TRUE.   !  Diurnal cycle for TOP 
    118118/ 
    119119!----------------------------------------------------------------------- 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/GENERAL/PARAM/XML/file_def_nemo-top.xml

    r6601 r6618  
    141141        </file> 
    142142 
    143        <file id="file50" name_suffix="_gas" description="Gas tracer variables" enabled=".FALSE." > 
     143       <file id="file60" name_suffix="_gas" description="Gas tracer variables" enabled=".FALSE." > 
    144144         <field field_ref="e3t"       name="E3T"      long_name="T-cell thickness" /> 
    145145         <field field_ref="N2O"       name="N2O"      operation="average" freq_op="1mo" level="1" > @N2O_e3t / @e3t </field> 
    … …  
    257257          <field field_ref="DeltaC14"    name="DeltaC14" level="1"   /> 
    258258          <field field_ref="C14Age"      name="C14Age"   level="2"   /> 
    259           <field field_ref="RAge"        name="RAge"     level="2"   /> 
    260           <field field_ref="AtmCO2"      name="AtmCO2"   level="2"   /> 
    261           <field field_ref="AtmC14"      name="AtmC14"   level="2"   /> 
    262           <field field_ref="K_C14"       name="K_C14"    level="2"   /> 
    263           <field field_ref="K_CO2"       name="K_CO2"    level="2"   /> 
    264           <field field_ref="C14Inv"      name="C14Inv"   level="2"   /> 
    265        </file> 
    266  
    267  
    268        <file id="file51" name_suffix="_gas" description="Gas tracer variables" enabled=".FALSE." > 
     259       </file> 
     260 
     261 
     262       <file id="file61" name_suffix="_gas" description="Gas tracer variables" enabled=".FALSE." > 
    269263         <field field_ref="e3t"       name="E3T"      long_name="T-cell thickness" /> 
    270264         <field field_ref="N2O"       name="N2O"      operation="average" freq_op="1y" level="1" > @N2O_e3t / @e3t </field> 

  • CONFIG/UNIFORM/v6/NEMO_v6.5/compile_nemo.sh

    r6601 r6618  
    229229 
    230230if [ -f $nemo_root/cfgs/$cfg_wrk/BLD/bin/nemo.exe ] ; then 
    231    mv $nemo_root/cfgs/$cfg_wrk/BLD/bin/nemo.exe $modipsl/bin/opa_${cplmode}_${optmode}.exe 
     231   if [ ${cpltop} == WithoutTOP ]  ;  then 
     232      mv $nemo_root/cfgs/$cfg_wrk/BLD/bin/nemo.exe $modipsl/bin/opa_${optmode}.exe 
     233   else 
     234      mv $nemo_root/cfgs/$cfg_wrk/BLD/bin/nemo.exe $modipsl/bin/opa_top_${cplmode}_${optmode}.exe 
     235   fi 
    232236else 
    233237    echo "ERROR gcm${suffix} executable does not exist." 
    … …  
    235239    exit 
    236240fi 
    237  
    238241 
    239242echo >>$outfile ; echo "ALL COMPILING FINISHED" >> $outfile 
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