namelist_cfc_cfg namelist_cfc_ref namelist_cfg namelist_ice_cfg namelist_ice_ref namelist_pisces_cfg namelist_pisces_ref namelist_ref namelist_top_cfg namelist_top_ref _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | 0 namelist_cfc_cfg - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 0!! CFC : ORCA2_LIM_CFC_C14b configuration namelsit used to overwrite SHARED/namelist_cfc_ref 0!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 0!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 0&namcfcdate ! dates 0!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 0/ 0!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 0&namcfcdia ! additional 2D/3D tracers diagnostics 0!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 0/ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | 1 namelist_cfc_ref - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 1!! CFC : 1 - dates (namcfcdate) 1!! namelists 1!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 1!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 1&namcfcdate ! dates 1!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 1 ndate_beg = 300101 ! datedeb1 1 nyear_res = 1932 ! iannee1 1 ! Formatted file of annual hemisperic CFCs concentration in the atmosphere (ppt) 1 clnamecfc = 'CFCs_CDIAC.dat' 1/ 1!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 1&namcfcdia ! additional 2D/3D tracers diagnostics 1!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 1! ! name ! title of the field ! units ! 1! ! ! ! ! 1 cfcdia2d(1) = 'qtr_c11 ' , 'Air-sea flux of CFC-11 ', 'mol/m2/s ' 1 cfcdia2d(2) = 'qint_c11' , 'Cumulative air-sea flux of CFC-11 ', 'mol/m2 ' 1/ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | 2 namelist_cfg - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2 2!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2!! NEMO/OPA Configuration namelist : used to overwrite defaults values defined in SHARED/namelist_ref 2!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 2! 2!----------------------------------------------------------------------- 2&namrun ! parameters of the run 2!----------------------------------------------------------------------- 2 cn_exp=CM61-LR-dcppC-amv-ExTrop-pos-14 ! Experience name 2 nn_it000=5282849 ! First time step 2 nn_itend=5294560 ! Last time step 2 nn_date0=18560101 ! Date at nit_0000 (format yyyymmdd) used if ln_rstart=F or (ln_rstart=T and nn_rstctl=0 or 1) 2 nn_leapy=1 ! Leap year calendar (1) or not (0) 2 ln_rstart=.TRUE. ! start from rest (F) or from a restart file (T) 2 ln_rstart_ts=.FALSE. ! start from rest for current only (F) or from a restart file (T) 2 nn_rstctl=2 ! Restart control => activated only if ln_rstart = T 2 ! = 0 nn_date0 read in namelist ; nn_it000 : read in namelist 2 ! = 1 nn_date0 read in namelist ; nn_it000 : check consistancy between namelist and restart 2 ! = 2 nn_date0 read in restart ; nn_it000 : check consistancy between namelist and restart 2 cn_ocerst_in = "restartopa" ! Suffix of ocean restart name (input) 2 cn_ocerst_indir = "." ! directory from which to read input ocean restarts 2 cn_ocerst_out = "restart" ! Suffix of ocean restart name (output) 2 cn_ocerst_outdir = "." ! directory in which to write output ocean restarts 2 nn_istate = 0 ! Output the initial state (1) or not (0) 2 nn_stock=5294560 ! Frequency of creation of a restart file (modulo referenced to 1) 2 nn_write = 5475 ! Requency of write in the output file (modulo referenced to nn_it000) 2 ln_mskland = .true. ! Masks land points in NetCDF outputs 2 ln_mskutil = .true. ! Outputs without halos 2 ln_cfmeta = .true. ! output additional data to netCDF files required for compliance with the CF metadata standard 2/ 2!----------------------------------------------------------------------- 2&namcfg ! parameters of the configuration 2!----------------------------------------------------------------------- 2 cp_cfg = "orca" ! name of the configuration 2 jp_cfg = 1 ! resolution of the configuration 2 jpidta = 362 ! 1st lateral dimension ( >= jpi ) 2 jpjdta = 332 ! 2nd " " ( >= jpj ) 2 jpkdta = 75 ! number of levels ( >= jpk ) 2 jpiglo = 362 ! 1st dimension of global domain --> i =jpidta 2 jpjglo = 332 ! 2nd - - --> j =jpjdta 2 jperio = 6 ! lateral cond. type (between 0 and 6) 2/ 2!----------------------------------------------------------------------- 2&namzgr ! vertical coordinate 2!----------------------------------------------------------------------- 2/ 2!----------------------------------------------------------------------- 2&namzgr_sco ! s-coordinate or hybrid z-s-coordinate 2!----------------------------------------------------------------------- 2/ 2!----------------------------------------------------------------------- 2&namdom ! space and time domain (bathymetry, mesh, timestep) 2!----------------------------------------------------------------------- 2 nn_closea = 1 ! remove (=0) or keep (=1) closed seas and lakes (ORCA) 2 ! 2 jphgr_msh = 0 ! type of horizontal mesh 2 ppglam0 = 999999.0 ! longitude of first raw and column T-point (jphgr_msh = 1) 2 ppgphi0 = 999999.0 ! latitude of first raw and column T-point (jphgr_msh = 1) 2 ppe1_deg = 999999.0 ! zonal grid-spacing (degrees) 2 ppe2_deg = 999999.0 ! meridional grid-spacing (degrees) 2 ppe1_m = 999999.0 ! zonal grid-spacing (degrees) 2 ppe2_m = 999999.0 ! meridional grid-spacing (degrees) 2 ppsur = -3958.951371276829 ! ORCA r4, r2 and r05 coefficients 2 ppa0 = 103.9530096000000 ! (default coefficients) 2 ppa1 = 2.415951269000000 ! 2 ppkth = 15.35101370000000 ! 2 ppacr = 7.0 ! 2 ppdzmin = 999999.0 ! Minimum vertical spacing 2 pphmax = 999999.0 ! Maximum depth 2 ppa2 = 100.7609285000000 ! Double tanh function parameters 2 ppkth2 = 48.02989372000000 ! 2 ppacr2 = 13.00000000000 ! 2 rn_rdt = 2700. ! time step for the dynamics (and tracer if nn_acc=0) 2 rn_hmin = 20. 2 nn_msh=0 ! AUTO - Create (=1) a mesh file or not (=0) 2/ 2!----------------------------------------------------------------------- 2&namsplit 2!----------------------------------------------------------------------- 2 ln_bt_fw = .FALSE. ! leap-frog integration of barotropic equations 2 ln_bt_av = .TRUE. ! Time filtering of barotropic variables 2 ln_bt_nn_auto = .TRUE. ! Set nn_baro automatically to be just below 2 ! a user defined maximum courant number (rn_bt_cmax) 2 nn_baro = 30 ! Number of iterations of barotropic mode 2 ! during rn_rdt seconds. Only used if ln_bt_nn_auto=F 2 rn_bt_cmax = 0.8 ! Maximum courant number allowed if ln_bt_nn_auto=T 2 nn_bt_flt = 1 ! Time filter choice 2 ! = 0 None 2 ! = 1 Boxcar over nn_baro barotropic steps 2 ! = 2 Boxcar over 2*nn_baro " 2/ 2!----------------------------------------------------------------------- 2&namcrs ! Grid coarsening for dynamics output and/or 2 ! passive tracer coarsened online simulations 2!----------------------------------------------------------------------- 2/ 2!----------------------------------------------------------------------- 2&namtsd ! data : Temperature & Salinity 2!----------------------------------------------------------------------- 2 ln_tsd_tradmp = .false. ! damping of ocean T & S toward T &S input data (T) or not (F) 2 sn_tem = 'conservative_temperature_WOA13_decav_Reg1L75_clim', -1 ,'votemper' , .true. , .true. , 'yearly' , 'weights_3D_WOA13d1_2_eorca1_bilinear.nc' , '' , '' 2 sn_sal = 'absolute_salinity_WOA13_decav_Reg1L75_clim' , -1 ,'vosaline' , .true. , .true. , 'yearly' , 'weights_3D_WOA13d1_2_eorca1_bilinear.nc' , '' , '' 2/ 2!----------------------------------------------------------------------- 2&namsbc ! Surface Boundary Condition (surface module) 2!----------------------------------------------------------------------- 2 nn_fsbc = 2 ! frequency of surface boundary condition computation 2 ! (also = the frequency of sea-ice model call) 2 ln_blk_core = .false. ! CORE bulk formulation (T => fill namsbc_core) 2 ln_cpl = .true. ! atmosphere coupled formulation ( requires key_oasis3 ) 2 nn_limflx = 2 ! LIM3 Multi-category heat flux formulation (use -1 if LIM3 is not used) 2 ! =-1 Use per-category fluxes, bypass redistributor, forced mode only, not yet implemented coupled 2 ! = 0 Average per-category fluxes (forced and coupled mode) 2 ! = 1 Average and redistribute per-category fluxes, forced mode only, not yet implemented coupled 2 ! = 2 Redistribute a single flux over categories (coupled mode only) 2 nn_ice_embd = 1 ! AUTO - 2 ! =0 levitating ice (no mass exchange, concentration/dilution effect) 2 ! =1 levitating ice with mass and salt exchange but no presure effect 2 ! =2 embedded sea-ice (full salt and mass exchanges and pressure) 2 ln_rnf = .false. ! runoffs (T => fill namsbc_rnf) 2 ln_ssr = .true. ! Sea Surface Restoring on T and/or S (T => fill namsbc_ssr) 2 nn_fwb = 0 ! FreshWater Budget: =0 unchecked 2 nn_isf = 3 ! ice shelf melting/freezing (/=0 => fill namsbc_isf) 2 ! 3 = rnf file for isf 2!----------------------------------------------------------------------- 2&namsbc_core ! namsbc_core CORE bulk formulae 2!----------------------------------------------------------------------- 2/ 2!----------------------------------------------------------------------- 2&namtra_qsr ! penetrative solar radiation 2!----------------------------------------------------------------------- 2 sn_chl ='merged_ESACCI_BIOMER4V1R1_CHL_REG05', -1 , 'CHLA' , .true. , .true. , 'yearly' , 'weights_reg05_2_eorca1_bilinear.nc' , '' , '' 2 ln_traqsr = .true. ! Light penetration (T) or not (F) 2 ln_qsr_rgb = .false. ! RGB (Red-Green-Blue) light penetration 2 ln_qsr_2bd = .false. ! 2 bands light penetration 2 ln_qsr_bio = .true. ! bio-model light penetration 2/ 2!----------------------------------------------------------------------- 2&namsbc_rnf ! runoffs namelist surface boundary condition 2!----------------------------------------------------------------------- 2! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 2! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 2 sn_rnf = 'eORCA_R1_runoff_clim_v1.0_nomask', -1 , 'sorunoff', .true. , .true. , 'yearly' , '' , '' , '' 2 sn_cnf = 'eORCA_R1_runoff_clim_v1.0_nomask', 0 , 'socoeff' , .false. , .true. , 'yearly' , '' , '' , '' 2 sn_s_rnf = 'runoffs' , 24 , 'rosaline', .true. , .true. , 'yearly' , '' , '' , '' 2 sn_t_rnf = 'runoffs' , 24 , 'rotemper', .true. , .true. , 'yearly' , '' , '' , '' 2 sn_dep_rnf = 'runoffs_eORCA1.0_depths.nc' , 0 , 'rodepth' , .false. , .true. , 'yearly' , '' , '' , '' 2 2 ln_rnf_mouth = .false. ! specific treatment at rivers mouths 2 ln_rnf_depth = .true. ! read in depth information for runoff 2 ln_rnf_tem = .false. ! read in temperature information for runoff 2 ln_rnf_sal = .false. ! read in salinity information for runoff 2 ln_rnf_depth_ini = .false.! compute depth at initialisation from runoff file 2 rn_rnf_max = 0.05 ! max value of the runoff climatology over global domain ( if ln_rnf_depth_ini = .true ) 2 rn_dep_max = 150. ! depth over which runoffs is spread ( ln_rnf_depth_ini = .true ) 2 nn_rnf_depth_file=0 ! create (=1) a runoff depth file or not (=0) 2/ 2!----------------------------------------------------------------------- 2&namsbc_isf ! Top boundary layer (ISF) 2!----------------------------------------------------------------------- 2! ! file name ! frequency (hours) ! variable ! time interpol. ! clim ! 'yearly'/ ! weights ! rotation ! 2! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! 2! ! 2 sn_rnfisf = 'runoff-icb_DaiTrenberth_Depoorter_eORCA1_JD.nc' , -12 ,'sornfisf', .false. , .true. , 'yearly' , '' , '' 2 sn_depmax_isf = 'runoff-icb_DaiTrenberth_Depoorter_eORCA1_JD.nc' , -12 ,'sodepmax_isf' , .false. , .true. , 'yearly' , '' , '' 2 sn_depmin_isf = 'runoff-icb_DaiTrenberth_Depoorter_eORCA1_JD.nc' , -12 ,'sodepmin_isf' , .false. , .true. , 'yearly' , '' , '' 2/ 2!----------------------------------------------------------------------- 2&namsbc_apr ! Atmospheric pressure used as ocean forcing or in bulk 2!----------------------------------------------------------------------- 2/ 2!----------------------------------------------------------------------- 2&namsbc_ssr ! surface boundary condition : sea surface restoring 2!----------------------------------------------------------------------- 2! ! file name ! frequency (hours) ! variable ! time interpol. ! clim ! 'yearly'/ ! weights ! rotation ! 2! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! 2 2 sn_sst = 'sst_data' , -1 , 'tos' , .true. , .true. , 'yearly' , '' , '' , '' 2 sn_sss = 'sss_data' , -1 , 'sos' , .true. , .true. , 'yearly' , '' , '' , '' 2 sn_msk = 'msk_data' , -12 , 'msk' , .false. , .true. , 'yearly' , '' , '' , '' 2 2 cn_dir = './' ! root directory for the location of the runoff files 2 nn_sstr = 1 ! add a retroaction term in the surface heat flux (=1) or not (=0) 2 nn_restor = 2 ! restoring with variable gamma (=2) or classic (=1) 2 nn_sssr = 1 ! add a damping term in the surface freshwater flux (=2) 2 ! or to SSS only (=1) or no damping term (=0) 2 rn_dqdt = -40. ! magnitude of the retroaction on temperature [W/m2/K] 2 rn_deds = -864. ! magnitude of the damping on salinity [mm/day] 2 ln_sssr_bnd = .true. ! flag to bound erp term (associated with nn_sssr=2) 2 rn_sssr_bnd = 4.e0 ! ABS(Max/Min) value of the damping erp term [mm/day] 2 2/ 2!----------------------------------------------------------------------- 2&namsbc_alb ! albedo parameters 2!----------------------------------------------------------------------- 2 nn_ice_alb = 1 ! parameterization of ice/snow albedo 2 ! 0: Shine & Henderson-Sellers (JGR 1985), giving clear-sky albedo 2 ! 1: "home made" based on Brandt et al. (JClim 2005) and Grenfell & Perovich (JGR 2004), 2 ! giving cloud-sky albedo 2 rn_alb_sdry = 0.87 ! dry snow albedo : 0.80 (nn_ice_alb = 0); 0.85 (nn_ice_alb = 1); obs 0.85-0.87 (cloud-sky) 2 rn_alb_smlt = 0.82 ! melting snow albedo : 0.65 ( '' ) ; 0.75 ( '' ) ; obs 0.72-0.82 ( '' ) 2 rn_alb_idry = 0.65 ! dry ice albedo : 0.72 ( '' ) ; 0.60 ( '' ) ; obs 0.54-0.65 ( '' ) 2 rn_alb_imlt = 0.58 ! bare puddled ice albedo : 0.53 ( '' ) ; 0.50 ( '' ) ; obs 0.49-0.58 ( '' ) 2/ 2!----------------------------------------------------------------------- 2&namsbc_cpl ! coupling parameters 2!----------------------------------------------------------------------- 2! ! description ! multiple ! vector ! vector ! vector ! 2! ! ! categories ! reference ! orientation ! grids ! 2! send 2sn_snd_temp = 'weighted oce and ice' , 'no' , '' , '' , '' 2sn_snd_alb = 'weighted ice' , 'no' , '' , '' , '' 2sn_snd_thick = 'none' , 'no' , '' , '' , '' 2sn_snd_crt = 'mixed oce-ice' , 'no' , 'cartesian' , 'eastward-northward' , 'T' 2sn_snd_co2 = 'none' , 'no' , '' , '' , '' 2! receive 2sn_rcv_w10m = 'coupled' , 'no' , '' , '' , '' 2sn_rcv_taumod = 'none' , 'no' , '' , '' , '' 2sn_rcv_tau = 'mixed oce-ice' , 'no' , 'cartesian' , 'eastward-northward', 'U,V' 2sn_rcv_dqnsdt = 'coupled' , 'no' , '' , '' , '' 2sn_rcv_qsr = 'conservative' , 'no' , '' , '' , '' 2sn_rcv_qns = 'conservative' , 'no' , '' , '' , '' 2sn_rcv_emp = 'conservative' , 'no' , '' , '' , '' 2sn_rcv_rnf = 'coupled' , 'no' , '' , '' , '' 2sn_rcv_cal = 'coupled' , 'no' , '' , '' , '' 2sn_rcv_co2 = 'none' , 'no' , '' , '' , '' 2sn_rcv_icb = 'coupled' , 'no' , '' , '' , '' 2sn_rcv_isf = 'coupled' , 'no' , '' , '' , '' 2 2/ 2!----------------------------------------------------------------------- 2&namberg ! iceberg parameters 2!----------------------------------------------------------------------- 2 ln_icebergs = .false. 2 ln_bergdia = .false. ! Calculate budgets 2 nn_verbose_level = 0 ! Turn on more verbose output if level > 0 2 nn_verbose_write = 120 ! Timesteps between verbose messages 2 nn_sample_rate = 1 ! Timesteps between sampling for trajectory storage 2 ! Initial mass required for an iceberg of each class 2 rn_initial_mass = 8.8e7, 4.1e8, 3.3e9, 1.8e10, 3.8e10, 7.5e10, 1.2e11, 2.2e11, 3.9e11, 7.4e11 2 ! Proportion of calving mass to apportion to each class 2 rn_distribution = 0.24, 0.12, 0.15, 0.18, 0.12, 0.07, 0.03, 0.03, 0.03, 0.02 2 ! Ratio between effective and real iceberg mass (non-dim) 2 ! i.e. number of icebergs represented at a point 2 rn_mass_scaling = 2000, 200, 50, 20, 10, 5, 2, 1, 1, 1 2 ! thickness of newly calved bergs (m) 2 rn_initial_thickness = 40., 67., 133., 175., 250., 250., 250., 250., 250., 250. 2 rn_rho_bergs = 850. ! Density of icebergs 2 rn_LoW_ratio = 1.5 ! Initial ratio L/W for newly calved icebergs 2 ln_operator_splitting = .true. ! Use first order operator splitting for thermodynamics 2 rn_bits_erosion_fraction = 0. ! Fraction of erosion melt flux to divert to bergy bits 2 rn_sicn_shift = 0. ! Shift of sea-ice concn in erosion flux (0>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 3!! NEMO/LIM-3 : Ice configuration namelist. Overwrites SHARED/namelist_ice_lim3_ref 3!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 3 3!----------------------------------------------------------------------- 3&namicerun ! Share parameters for dynamics/advection/thermo 3!----------------------------------------------------------------------- 3 cn_icerst_in = "restart_ice_in" ! suffix of ice restart name (input) 3 rn_amax_n = 0.997 ! maximum tolerated ice concentration NH 3 rn_amax_s = 0.950 ! maximum tolerated ice concentration SH 3 ln_limdiahsb = .false. ! check the heat and salt budgets (T) or not (F) 3 ln_limdiaout = .true. ! output the heat and salt budgets (T) or not (F) 3/ 3!----------------------------------------------------------------------- 3&namiceini ! ice initialisation 3!----------------------------------------------------------------------- 3/ 3!----------------------------------------------------------------------- 3&namicedyn ! ice dynamic 3!----------------------------------------------------------------------- 3/ 3!------------------------------------------------------------------------------ 3&namicehdf ! Ice horizontal diffusion 3!------------------------------------------------------------------------------ 3/ 3!----------------------------------------------------------------------- 3&namicethd ! ice thermodynamic 3!----------------------------------------------------------------------- 3 rn_cdsn = 0.50 ! thermal conductivity of the snow (0.31 W/m/K, Maykut and Untersteiner, 1971) 3 ! Obs: 0.1-0.5 (Lecomte et al, JAMES 2013) 3/ 3!----------------------------------------------------------------------- 3&namicesal ! ice salinity 3!----------------------------------------------------------------------- 3/ 3!----------------------------------------------------------------------- 3&namiceitdme ! parameters for mechanical redistribution of ice 3!----------------------------------------------------------------------- 3 rn_astar = 0.03 ! exponential measure of ridging ice fraction (nn_partfun = 1) 3 rn_hstar = 25.0 ! determines the maximum thickness of ridged ice (m) (Hibler, 1980) 3/ 3!----------------------------------------------------------------------- 3&namicedia ! ice diagnostics 3!----------------------------------------------------------------------- 3/ 3!------------------------------------------------------------------------------ 3&namiceitd ! Ice discretization 3!------------------------------------------------------------------------------ 3/ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | 4 namelist_ice_ref - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4!! LIM3 namelist : 4!! 1 - Generic parameters (namicerun) 4!! 2 - Ice initialization (namiceini) 4!! 3 - Ice discretization (namiceitd) 4!! 4 - Ice dynamics and transport (namicedyn) 4!! 5 - Ice thermodynamics (namicethd) 4!! 6 - Ice salinity (namicesal) 4!! 7 - Ice mechanical redistribution (namiceitdme) 4!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 4! 4!------------------------------------------------------------------------------ 4&namicerun ! Generic parameters 4!------------------------------------------------------------------------------ 4 jpl = 5 ! number of ice categories 4 nlay_i = 2 ! number of ice layers 4 nlay_s = 1 ! number of snow layers (only 1 is working) 4 cn_icerst_in = "restart_ice" ! suffix of ice restart name (input) 4 cn_icerst_indir = "." ! directory from which to read input ice restarts 4 cn_icerst_out = "restart_ice" ! suffix of ice restart name (output) 4 cn_icerst_outdir = "." ! directory in which to write output ice restarts 4 ln_limdyn = .true. ! ice dynamics (T) or thermodynamics only (F) 4 rn_amax_n = 0.999 ! maximum tolerated ice concentration NH 4 rn_amax_s = 0.999 ! maximum tolerated ice concentration SH 4 ln_limdiahsb = .false. ! check the heat and salt budgets (T) or not (F) 4 ln_limdiaout = .true. ! output the heat and salt budgets (T) or not (F) 4 ln_icectl = .false. ! ice points output for debug (T or F) 4 iiceprt = 10 ! i-index for debug 4 jiceprt = 10 ! j-index for debug 4/ 4!------------------------------------------------------------------------------ 4&namiceini ! Ice initialization 4!------------------------------------------------------------------------------ 4 ln_iceini = .true. ! activate ice initialization (T) or not (F) 4 rn_thres_sst = 2.0 ! maximum water temperature with initial ice (degC) 4 rn_hts_ini_n = 0.3 ! initial real snow thickness (m), North 4 rn_hts_ini_s = 0.3 ! " " South 4 rn_hti_ini_n = 3.0 ! initial real ice thickness (m), North 4 rn_hti_ini_s = 1.0 ! " " South 4 rn_ati_ini_n = 0.9 ! initial ice concentration (-), North 4 rn_ati_ini_s = 0.9 ! " " South 4 rn_smi_ini_n = 6.3 ! initial ice salinity (g/kg), North 4 rn_smi_ini_s = 6.3 ! " " South 4 rn_tmi_ini_n = 270. ! initial ice/snw temperature (K), North 4 rn_tmi_ini_s = 270. ! " " South 4/ 4!------------------------------------------------------------------------------ 4&namiceitd ! Ice discretization 4!------------------------------------------------------------------------------ 4 nn_catbnd = 2 ! computation of ice category boundaries based on 4 ! 1: tanh function 4 ! 2: h^(-alpha), function of rn_himean 4 rn_himean = 2.0 ! expected domain-average ice thickness (m), nn_catbnd = 2 only 4/ 4!------------------------------------------------------------------------------ 4&namicedyn ! Ice dynamics and transport 4!------------------------------------------------------------------------------ 4 nn_icestr = 0 ! ice strength parameteriztaion 4 ! 0: Hibler_79 P = pstar**exp(-c_rhg*A) 4 ! 1: Rothrock_75 P = Cf*coeff*integral(wr.h^2) 4 ln_icestr_bvf = .false. ! ice strength function brine volume (T) or not (F) 4 rn_pe_rdg = 17.0 ! ridging work divided by pot. energy change in ridging, if nn_icestr = 1 4 rn_pstar = 2.0e+04 ! ice strength thickness parameter (N/m2), nn_icestr = 0 4 rn_crhg = 20.0 ! ice strength conc. parameter (-), nn_icestr = 0 4 rn_cio = 5.0e-03 ! ice-ocean drag coefficient (-) 4 rn_creepl = 1.0e-12 ! creep limit (s-1) 4 rn_ecc = 2.0 ! eccentricity of the elliptical yield curve 4 nn_nevp = 120 ! number of EVP subcycles 4 rn_relast = 0.333 ! ratio of elastic timescale to ice time step: Telast = dt_ice * rn_relast 4 ! advised value: 1/3 (rn_nevp=120) or 1/9 (rn_nevp=300) 4/ 4!------------------------------------------------------------------------------ 4&namicehdf ! Ice horizontal diffusion 4!------------------------------------------------------------------------------ 4 nn_ahi0 = -1 ! horizontal diffusivity computation 4 ! -1: no diffusion (bypass limhdf) 4 ! 0: use rn_ahi0_ref 4 ! 1: use rn_ahi0_ref x mean grid cell length / ( 2deg mean grid cell length ) 4 ! 2: use rn_ahi0_ref x grid cell length / ( 2deg mean grid cell length ) 4 rn_ahi0_ref = 350.0 ! horizontal sea ice diffusivity (m2/s) 4 ! if nn_ahi0 > 0, rn_ahi0_ref is the reference value at a nominal 2 deg resolution 4 nn_convfrq = 5 ! convergence check frequency of the Crant-Nicholson scheme (perf. optimization) 4/ 4!------------------------------------------------------------------------------ 4&namicethd ! Ice thermodynamics 4!------------------------------------------------------------------------------ 4 rn_hnewice = 0.1 ! thickness for new ice formation in open water (m) 4 ln_frazil = .false. ! use frazil ice collection thickness as a function of wind (T) or not (F) 4 rn_maxfrazb = 1.0 ! maximum fraction of frazil ice collecting at the ice base 4 rn_vfrazb = 0.417 ! thresold drift speed for frazil ice collecting at the ice bottom (m/s) 4 rn_Cfrazb = 5.0 ! squeezing coefficient for frazil ice collecting at the ice bottom 4 rn_himin = 0.10 ! minimum ice thickness (m) used in remapping, must be smaller than rn_hnewice 4 rn_betas = 0.66 ! exponent in lead-ice repratition of snow precipitation 4 ! betas = 1 -> equipartition, betas < 1 -> more on leads 4 rn_kappa_i = 1.0 ! radiation attenuation coefficient in sea ice (m-1) 4 nn_conv_dif = 50 ! maximal number of iterations for heat diffusion computation 4 rn_terr_dif = 0.0001 ! maximum temperature after heat diffusion (degC) 4 nn_ice_thcon= 1 ! sea ice thermal conductivity 4 ! 0: k = k0 + beta.S/T (Untersteiner, 1964) 4 ! 1: k = k0 + beta1.S/T - beta2.T (Pringle et al., 2007) 4 rn_cdsn = 0.31 ! thermal conductivity of the snow (0.31 W/m/K, Maykut and Untersteiner, 1971) 4 ! Obs: 0.1-0.5 (Lecomte et al, JAMES 2013) 4 nn_monocat = 0 ! virtual ITD mono-category parameterizations (1, jpl = 1 only) or not (0) 4 ! 2: simple piling instead of ridging --- temporary option 4 ! 3: activate G(he) only --- temporary option 4 ! 4: activate lateral melting only --- temporary option 4 ln_it_qnsice = .true. ! iterate the surface non-solar flux with surface temperature (T) or not (F) 4/ 4!------------------------------------------------------------------------------ 4&namicesal ! Ice salinity 4!------------------------------------------------------------------------------ 4 nn_icesal = 2 ! ice salinity option 4 ! 1: constant ice salinity (S=rn_icesal) 4 ! 2: varying salinity parameterization S(z,t) 4 ! 3: prescribed salinity profile S(z), Schwarzacher, 1959 4 rn_icesal = 4. ! ice salinity (g/kg, nn_icesal = 1 only) 4 rn_sal_gd = 5. ! restoring ice salinity, gravity drainage (g/kg) 4 rn_time_gd = 1.73e+6 ! restoring time scale, gravity drainage (s) 4 rn_sal_fl = 2. ! restoring ice salinity, flushing (g/kg) 4 rn_time_fl = 8.64e+5 ! restoring time scale, flushing (s) 4 rn_simax = 20. ! maximum tolerated ice salinity (g/kg) 4 rn_simin = 0.1 ! minimum tolerated ice salinity (g/kg) 4/ 4!------------------------------------------------------------------------------ 4&namiceitdme ! Ice mechanical redistribution (ridging and rafting) 4!------------------------------------------------------------------------------ 4 rn_Cs = 0.5 ! fraction of shearing energy contributing to ridging 4 rn_fsnowrdg = 0.5 ! snow volume fraction that survives in ridging 4 rn_fsnowrft = 0.5 ! snow volume fraction that survives in rafting 4 nn_partfun = 1 ! type of ridging participation function 4 ! 0: linear (Thorndike et al, 1975) 4 ! 1: exponential (Lipscomb, 2007 4 rn_gstar = 0.15 ! fractional area of thin ice being ridged (nn_partfun = 0) 4 rn_astar = 0.05 ! exponential measure of ridging ice fraction (nn_partfun = 1) 4 rn_hstar = 100.0 ! determines the maximum thickness of ridged ice (m) (Hibler, 1980) 4 ln_rafting = .true. ! rafting activated (T) or not (F) 4 rn_hraft = 0.75 ! threshold thickness for rafting (m) 4 rn_craft = 5.0 ! squeezing coefficient used in the rafting function 4 rn_por_rdg = 0.3 ! porosity of newly ridged ice (Lepparanta et al., 1995) 4/ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | 5 namelist_pisces_cfg - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 5!! PISCES : Configuration namelist : used to overwrite defaults values defined in SHARED/namelist_pis_ref 5!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampisext ! air-sea exchange 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5 atcco2=2.8432e+02 ! Constant value atmospheric pCO2 - ln_co2int = F 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampisatm ! Atmospheric pressure 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5 ln_presatm = .false. ! constant atmopsheric pressure (F) or from a file (T) 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampisbio ! biological parameters 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampislim ! parameters for nutrient limitations 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampisopt ! parameters for optics 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 5! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 5 sn_par = 'par_fraction_gewex_clim90s00s_eORCA_R1.nc', 24 , 'fr_par' , .true. , .true. , 'yearly' , '' , '' , '' 5 ln_varpar = .true. ! boolean for PAR variable 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampisprod ! parameters for phytoplankton growth 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampismort ! parameters for phytoplankton sinks 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampismes ! parameters for mesozooplankton 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampiszoo ! parameters for microzooplankton 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampisfer ! parameters for iron chemistry 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampisrem ! parameters for remineralization 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampiscal ! parameters for Calcite chemistry 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampissbc ! parameters for inputs deposition 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 5! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 5! 5 sn_dust = 'dust.orca.nc' , -1 , 'dust' , .true. , .true. , 'yearly' , 'weights_lmd144142_bilin.nc', '' , '' 5 sn_solub = 'Solubility_T62_Mahowald_eORCA_R1.nc', -12 , 'solubility2' , .false. , .true. , 'yearly' , '' , '' , '' 5 sn_riverdic = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdic' , .true. , .true. , 'yearly' , '' , '' , '' 5 sn_riverdoc = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdoc' , .true. , .true. , 'yearly' , '' , '' , '' 5 sn_riverdin = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdin' , .true. , .true. , 'yearly' , '' , '' , '' 5 sn_riverdon = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdon' , .true. , .true. , 'yearly' , '' , '' , '' 5 sn_riverdip = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdip' , .true. , .true. , 'yearly' , '' , '' , '' 5 sn_riverdop = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdop' , .true. , .true. , 'yearly' , '' , '' , '' 5 sn_riverdsi = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdsi' , .true. , .true. , 'yearly' , '' , '' , '' 5 sn_ndepo = 'ndeposition.orca.nc' , -1 , 'ndep' , .true. , .true. , 'yearly' , 'weights_2d_bilin.nc', '' , '' 5 sn_ironsed = 'pmarge_etopo_eORCA_R1.nc' , -12 , 'bathy' , .false. , .true. , 'yearly' , '' , '' , '' 5 cn_dir = './' ! root directory for the location of the dynamical files 5 ln_dust = .true. ! boolean for dust input from the atmosphere 5 ln_solub = .true. ! boolean for variable solubility of atm. Iron 5 ln_river = .true. ! boolean for river input of nutrients 5 ln_ndepo = .true. ! boolean for atmospheric deposition of N 5 ln_ironsed = .true. ! boolean for Fe input from sediments 5 ln_ironice = .true. ! boolean for Fe input from sea ice 5 sedfeinput = 1.e-9 ! Coastal release of Iron 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampisdmp ! Damping 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5 ln_pisdmp = .true. ! No relaxation for PISCES passive tracers 5 nn_pisdmp=11680 ! Frequency of Relaxation 5/ 5!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 5&nampismass ! Mass conservation 5!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 5/ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | 6 namelist_pisces_ref - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 6!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 6!! PISCES (key_pisces) reference namelist (see below for key_pisces_reduced) 6!! 1 - air-sea exchange (nampisext) 6!! 2 - biological parameters (nampisbio) 6!! 3 - parameters for nutrient limitations (nampislim) 6!! 4 - parameters for phytoplankton (nampisprod,nampismort) 6!! 5 - parameters for zooplankton (nampismes,nampiszoo) 6!! 6 - parameters for remineralization (nampisrem) 6!! 7 - parameters for calcite chemistry (nampiscal) 6!! 8 - parameters for inputs deposition (nampissed) 6!! 9 - parameters for Kriest parameterization (nampiskrp, nampiskrs) 6!! 10 - additional 2D/3D diagnostics (nampisdia) 6!! 11 - Damping (nampisdmp) 6!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampisext ! air-sea exchange 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 ln_co2int = .false. ! read atm pco2 from a file (T) or constant (F) 6 atcco2 = 280. ! Constant value atmospheric pCO2 - ln_co2int = F 6 clname = 'atcco2.txt' ! Name of atm pCO2 file - ln_co2int = T 6 nn_offset = 0 ! Offset model-data start year - ln_co2int = T 6! ! If your model year is iyy, nn_offset=(years(1)-iyy) 6! ! then the first atmospheric CO2 record read is at years(1) 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampisatm ! Atmospheric prrssure 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 6! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 6 sn_patm = 'presatm' , -1 , 'patm' , .true. , .true. , 'yearly' , '' , '' , '' 6 cn_dir = './' ! root directory for the location of the dynamical files 6! 6 ln_presatm = .false. ! constant atmopsheric pressure (F) or from a file (T) 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampisbio ! biological parameters 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 nrdttrc = 1 ! time step frequency for biology 6 wsbio = 2. ! POC sinking speed 6 xkmort = 2.E-7 ! half saturation constant for mortality 6 ferat3 = 10.E-6 ! Fe/C in zooplankton 6 wsbio2 = 30. ! Big particles sinking speed 6 niter1max = 1 ! Maximum number of iterations for POC 6 niter2max = 1 ! Maximum number of iterations for GOC 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampislim ! parameters for nutrient limitations 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 concnno3 = 1.e-6 ! Nitrate half saturation of nanophytoplankton 6 concdno3 = 3.E-6 ! Nitrate half saturation for diatoms 6 concnnh4 = 1.E-7 ! NH4 half saturation for phyto 6 concdnh4 = 3.E-7 ! NH4 half saturation for diatoms 6 concnfer = 1.E-9 ! Iron half saturation for phyto 6 concdfer = 3.E-9 ! Iron half saturation for diatoms 6 concbfe = 1.E-11 ! Iron half-saturation for DOC remin. 6 concbnh4 = 2.E-8 ! NH4 half saturation for DOC remin. 6 concbno3 = 2.E-7 ! Nitrate half saturation for DOC remin. 6 xsizedia = 1.E-6 ! Minimum size criteria for diatoms 6 xsizephy = 1.E-6 ! Minimum size criteria for phyto 6 xsizern = 3.0 ! Size ratio for nanophytoplankton 6 xsizerd = 3.0 ! Size ratio for diatoms 6 xksi1 = 2.E-6 ! half saturation constant for Si uptake 6 xksi2 = 20E-6 ! half saturation constant for Si/C 6 xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization 6 qnfelim = 7.E-6 ! Optimal quota of phyto 6 qdfelim = 7.E-6 ! Optimal quota of diatoms 6 caco3r = 0.3 ! mean rain ratio 6 oxymin = 1.E-6 ! Half-saturation constant for anoxia 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampisopt ! parameters for optics 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 6! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 6 sn_par = 'par.orca' , 24 , 'fr_par' , .true. , .true. , 'yearly' , '' , '' , '' 6 cn_dir = './' ! root directory for the location of the dynamical files 6 ln_varpar = .true. ! boolean for PAR variable 6 parlux = 0.43 ! Fraction of shortwave as PAR 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampisprod ! parameters for phytoplankton growth 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 pislope = 2. ! P-I slope 6 pislope2 = 2. ! P-I slope for diatoms 6 xadap = 0. ! Adaptation factor to low light 6 excret = 0.05 ! excretion ratio of phytoplankton 6 excret2 = 0.05 ! excretion ratio of diatoms 6 ln_newprod = .true. ! Enable new parame. of production (T/F) 6 bresp = 0.033 ! Basal respiration rate 6 chlcnm = 0.033 ! Maximum Chl/C in nanophytoplankton 6 chlcdm = 0.05 ! Maximum Chl/C in diatoms 6 chlcmin = 0.004 ! Minimum Chl/c in phytoplankton 6 fecnm = 40E-6 ! Maximum Fe/C in nanophytoplankton 6 fecdm = 40E-6 ! Maximum Fe/C in diatoms 6 grosip = 0.159 ! mean Si/C ratio 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampismort ! parameters for phytoplankton sinks 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 wchl = 0.01 ! quadratic mortality of phytoplankton 6 wchld = 0.01 ! maximum quadratic mortality of diatoms 6 wchldm = 0.03 ! maximum quadratic mortality of diatoms 6 mprat = 0.01 ! phytoplankton mortality rate 6 mprat2 = 0.01 ! Diatoms mortality rate 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampismes ! parameters for mesozooplankton 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 part2 = 0.75 ! part of calcite not dissolved in mesozoo guts 6 grazrat2 = 0.75 ! maximal mesozoo grazing rate 6 resrat2 = 0.005 ! exsudation rate of mesozooplankton 6 mzrat2 = 0.03 ! mesozooplankton mortality rate 6 xprefc = 1. ! mesozoo preference for diatoms 6 xprefp = 0.3 ! mesozoo preference for nanophyto. 6 xprefz = 1. ! mesozoo preference for microzoo. 6 xprefpoc = 0.3 ! mesozoo preference for poc 6 xthresh2zoo = 1E-8 ! zoo feeding threshold for mesozooplankton 6 xthresh2dia = 1E-8 ! diatoms feeding threshold for mesozooplankton 6 xthresh2phy = 1E-8 ! nanophyto feeding threshold for mesozooplankton 6 xthresh2poc = 1E-8 ! poc feeding threshold for mesozooplankton 6 xthresh2 = 3E-7 ! Food threshold for grazing 6 xkgraz2 = 20.E-6 ! half saturation constant for meso grazing 6 epsher2 = 0.35 ! Efficicency of Mesozoo growth 6 sigma2 = 0.6 ! Fraction of mesozoo excretion as DOM 6 unass2 = 0.3 ! non assimilated fraction of P by mesozoo 6 grazflux = 2.e3 ! flux-feeding rate 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampiszoo ! parameters for microzooplankton 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 part = 0.5 ! part of calcite not dissolved in microzoo gutsa 6 grazrat = 3.0 ! maximal zoo grazing rate 6 resrat = 0.03 ! exsudation rate of zooplankton 6 mzrat = 0.004 ! zooplankton mortality rate 6 xpref2c = 0.1 ! Microzoo preference for POM 6 xpref2p = 1. ! Microzoo preference for Nanophyto 6 xpref2d = 0.5 ! Microzoo preference for Diatoms 6 xthreshdia = 1.E-8 ! Diatoms feeding threshold for microzooplankton 6 xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton 6 xthreshpoc = 1.E-8 ! POC feeding threshold for microzooplankton 6 xthresh = 3.E-7 ! Food threshold for feeding 6 xkgraz = 20.E-6 ! half sturation constant for grazing 6 epsher = 0.3 ! Efficiency of microzoo growth 6 sigma1 = 0.6 ! Fraction of microzoo excretion as DOM 6 unass = 0.3 ! non assimilated fraction of phyto by zoo 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampisfer ! parameters for iron chemistry 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 ln_fechem = .false. ! complex iron chemistry ( T/F ) 6 ln_ligvar = .false. ! variable ligand concentration 6 xlam1 = 0.005 ! scavenging rate of Iron 6 xlamdust = 150.0 ! Scavenging rate of dust 6 ligand = 0.6E-9 ! Ligands concentration 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampisrem ! parameters for remineralization 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 xremik = 0.3 ! remineralization rate of DOC 6 xremip = 0.025 ! remineralisation rate of POC 6 nitrif = 0.05 ! NH4 nitrification rate 6 xsirem = 0.003 ! remineralization rate of Si 6 xsiremlab = 0.03 ! fast remineralization rate of Si 6 xsilab = 0.5 ! Fraction of labile biogenic silica 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampiscal ! parameters for Calcite chemistry 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 kdca = 6. ! calcite dissolution rate constant (1/time) 6 nca = 1. ! order of dissolution reaction (dimensionless) 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampissbc ! parameters for inputs deposition 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 6! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 6 sn_dust = 'dust.orca' , -1 , 'dust' , .true. , .true. , 'yearly' , '' , '' , '' 6 sn_solub = 'solubility.orca' , -12 , 'solubility1' , .false. , .true. , 'yearly' , '' , '' , '' 6 sn_riverdic = 'river.orca' , 120 , 'riverdic' , .true. , .true. , 'yearly' , '' , '' , '' 6 sn_riverdoc = 'river.orca' , 120 , 'riverdoc' , .true. , .true. , 'yearly' , '' , '' , '' 6 sn_riverdin = 'river.orca' , 120 , 'riverdin' , .true. , .true. , 'yearly' , '' , '' , '' 6 sn_riverdon = 'river.orca' , 120 , 'riverdon' , .true. , .true. , 'yearly' , '' , '' , '' 6 sn_riverdip = 'river.orca' , 120 , 'riverdip' , .true. , .true. , 'yearly' , '' , '' , '' 6 sn_riverdop = 'river.orca' , 120 , 'riverdop' , .true. , .true. , 'yearly' , '' , '' , '' 6 sn_riverdsi = 'river.orca' , 120 , 'riverdsi' , .true. , .true. , 'yearly' , '' , '' , '' 6 sn_ndepo = 'ndeposition.orca', -12 , 'ndep' , .false. , .true. , 'yearly' , '' , '' , '' 6 sn_ironsed = 'bathy.orca' , -12 , 'bathy' , .false. , .true. , 'yearly' , '' , '' , '' 6 sn_hydrofe = 'hydrofe.orca' , -12 , 'epsdb' , .false. , .true. , 'yearly' , '' , '' , '' 6! 6 cn_dir = './' ! root directory for the location of the dynamical files 6 ln_dust = .true. ! boolean for dust input from the atmosphere 6 ln_solub = .true. ! boolean for variable solubility of atm. Iron 6 ln_river = .true. ! boolean for river input of nutrients 6 ln_ndepo = .true. ! boolean for atmospheric deposition of N 6 ln_ironsed = .true. ! boolean for Fe input from sediments 6 ln_ironice = .true. ! boolean for Fe input from sea ice 6 ln_hydrofe = .false. ! boolean for from hydrothermal vents 6 sedfeinput = 2.e-9 ! Coastal release of Iron 6 dustsolub = 0.02 ! Solubility of the dusta 6 mfrac = 0.035 ! Fe mineral fraction of dust 6 wdust = 2.0 ! Dust sinking speed 6 icefeinput = 15.e-9 ! Iron concentration in sea ice 6 nitrfix = 1.e-7 ! Nitrogen fixation rate 6 diazolight = 50. ! Diazotrophs sensitivity to light (W/m2) 6 concfediaz = 1.e-10 ! Diazotrophs half-saturation Cste for Iron 6 hratio = 1.e+7 ! Fe to 3He ratio assumed for vent iron supply 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampisice ! Prescribed sea ice tracers 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6! constant ocean tracer concentrations are defined in trcice_pisces.F90 (Global, Arctic, Antarctic and Baltic) 6! trc_ice_ratio * betw 0 and 1: prescribed ice/ocean tracer concentration ratio 6! * -1 => the ice-ocean tracer concentration ratio follows the 6! ice-ocean salinity ratio 6! * -2 => tracer concentration in sea ice is prescribed and 6! trc_ice_prescr is used 6! trc_ice_prescr * prescribed tracer concentration. used only if 6! trc_ice_ratio = -2. equals -99 if not used. 6! cn_trc_o * 'GL' use global ocean values making the Baltic distinction only 6! 'AA' use specific Arctic/Antarctic/Baltic values 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6! sn_tri_ ! trc_ice_ratio ! trc_ice_prescr ! cn_trc_o 6 sn_tri_dic = -1., -99., 'AA' 6 sn_tri_doc = 0., -99., 'AA' 6 sn_tri_tal = -1., -99., 'AA' 6 sn_tri_oxy = -1., -99., 'AA' 6 sn_tri_cal = 0., -99., 'AA' 6 sn_tri_po4 = -1., -99., 'AA' 6 sn_tri_poc = 0., -99., 'AA' 6 sn_tri_goc = 0., -99., 'AA' 6 sn_tri_bfe = 0., -99., 'AA' 6 sn_tri_num = 0., -99., 'AA' 6 sn_tri_sil = -1., -99., 'AA' 6 sn_tri_dsi = 0., -99., 'AA' 6 sn_tri_gsi = 0., -99., 'AA' 6 sn_tri_phy = 0., -99., 'AA' 6 sn_tri_dia = 0., -99., 'AA' 6 sn_tri_zoo = 0., -99., 'AA' 6 sn_tri_mes = 0., -99., 'AA' 6 sn_tri_fer = -2., 15E-9, 'AA' 6 sn_tri_sfe = 0., -99., 'AA' 6 sn_tri_dfe = 0., -99., 'AA' 6 sn_tri_nfe = 0., -99., 'AA' 6 sn_tri_nch = 0., -99., 'AA' 6 sn_tri_dch = 0., -99., 'AA' 6 sn_tri_no3 = -1., -99., 'AA' 6 sn_tri_nh4 = 1., -99., 'AA' 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampiskrp ! Kriest parameterization : parameters "key_kriest" 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 xkr_eta = 1.17 ! Sinking exponent 6 xkr_zeta = 2.28 ! N content exponent 6 xkr_ncontent = 5.7E-6 ! N content factor 6 xkr_mass_min = 0.0002 ! Minimum mass for Aggregates 6 xkr_mass_max = 1. ! Maximum mass for Aggregates 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampiskrs ! Kriest parameterization : size classes "key_kriest" 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 xkr_sfact = 942. ! Sinking factor 6 xkr_stick = 0.5 ! Stickiness 6 xkr_nnano = 2.337 ! Nbr of cell in nano size class 6 xkr_ndiat = 3.718 ! Nbr of cell in diatoms size class 6 xkr_nmeso = 7.147 ! Nbr of cell in mesozoo size class 6 xkr_naggr = 9.877 ! Nbr of cell in aggregates size class 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampisdia ! additional 2D/3D tracers diagnostics 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6! ! name ! title of the field ! units ! 6! ! ! ! ! 6 pisdia2d(1) = 'Cflx ' , 'DIC flux ', 'molC/m2/s ' 6 pisdia2d(2) = 'Oflx ' , 'Oxygen flux ', 'molC/m2/s ' 6 pisdia2d(3) = 'Kg ' , 'Gas transfer ', 'mol/m2/s/uatm' 6 pisdia2d(4) = 'Delc ' , 'Delta CO2 ', 'uatm ' 6 pisdia2d(5) = 'PMO ' , 'POC export ', 'molC/m2/s ' 6 pisdia2d(6) = 'PMO2 ' , 'GOC export ', 'molC/m2/s ' 6 pisdia2d(7) = 'ExpFe1 ' , 'Nano iron export ', 'molFe/m2/s ' 6 pisdia2d(8) = 'ExpFe2 ' , 'Diatoms iron export ', 'molFe/m2/s ' 6 pisdia2d(9) = 'ExpSi ' , 'Silicate export ', 'molSi/m2/s ' 6 pisdia2d(10) = 'ExpCaCO3 ' , 'Calcite export ', 'molC/m2/s ' 6 pisdia2d(11) = 'heup ' , 'euphotic layer depth ', 'm ' 6 pisdia2d(12) = 'Fedep ' , 'Iron dep ', 'molFe/m2/s ' 6 pisdia2d(13) = 'Nfix ' , 'Nitrogen Fixation ', 'molN/m2/s ' 6 pisdia3d(1) = 'PH ' , 'PH ', '- ' 6 pisdia3d(2) = 'CO3 ' , 'Bicarbonates ', 'mol/l ' 6 pisdia3d(3) = 'CO3sat ' , 'CO3 saturation ', 'mol/l ' 6 pisdia3d(4) = 'PAR ' , 'light penetration ', 'W/m2 ' 6 pisdia3d(5) = 'PPPHY ' , 'Primary production of nanophyto ', 'molC/m3/s ' 6 pisdia3d(6) = 'PPPHY2 ' , 'Primary production of diatoms ', 'molC/m3/s ' 6 pisdia3d(7) = 'PPNEWN ' , 'New Primary production of nano ', 'molC/m3/s ' 6 pisdia3d(8) = 'PPNEWD ' , 'New Primary production of diat ', 'molC/m3/s ' 6 pisdia3d(9) = 'PBSi ' , 'Primary production of Si diatoms ', 'molSi/m3/s ' 6 pisdia3d(10) = 'PFeN ' , 'Primary production of nano iron ', 'molFe/m3/s ' 6 pisdia3d(11) = 'PFeD ' , 'Primary production of diatoms iron', 'molFe/m3/s ' 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampisdmp ! Damping 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 ln_pisdmp = .true. ! Relaxation fo some tracers to a mean value 6 nn_pisdmp = 5475 ! Frequency of Relaxation 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampismass ! Mass conservation 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 ln_check_mass = .false. ! Check mass conservation 6/ 6!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 6!! PISCES reduced (key_pisces_reduced, ex LOBSTER) : namelists 6!! 1 - biological parameters for phytoplankton (namlobphy) 6!! 2 - biological parameters for nutrients (namlobnut) 6!! 3 - biological parameters for zooplankton (namlobzoo) 6!! 4 - biological parameters for detritus (namlobdet) 6!! 5 - biological parameters for DOM (namlobdom) 6!! 6 - parameters from aphotic layers to sediment (namlobsed) 6!! 7 - general coefficients (namlobrat) 6!! 8 - optical parameters (namlobopt) 6 6!! 10 - biological diagnostics trends (namlobdbi) 6!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&namlobphy ! biological parameters for phytoplankton 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 tmumax = 1.21e-5 ! maximal phytoplankton growth rate [s-1] 6 rgamma = 0.05 ! phytoplankton exudation fraction [%] 6 fphylab = 0.75 ! NH4 fraction of phytoplankton exsudation 6 tmminp = 5.8e-7 ! minimal phytoplancton mortality rate [0.05/86400 s-1=20 days] 6 aki = 33. ! light photosynthesis half saturation constant[W/m2] 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&namlobnut ! biological parameters for nutrients 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 akno3 = 0.7 ! nitrate limitation half-saturation value [mmol/m3] 6 aknh4 = 0.001 ! ammonium limitation half-saturation value [mmol/m3] 6 taunn = 5.80e-7 ! nitrification rate [s-1] 6 psinut = 3. ! inhibition of nitrate uptake by ammonium 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&namlobzoo ! biological parameters for zooplankton 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 rppz = 0.8 ! zooplankton nominal preference for phytoplancton food [%] 6 taus = 9.26E-6 ! specific zooplankton maximal grazing rate [s-1] 6! ! 0.75/86400 s-1=8.680555E-6 1/86400 = 1.15e-5 6 aks = 1. ! half-saturation constant for total zooplankton grazing [mmolN.m-3] 6 rpnaz = 0.3 ! non-assimilated phytoplankton by zooplancton [%] 6 rdnaz = 0.3 ! non-assimilated detritus by zooplankton [%] 6 tauzn = 8.1e-7 ! zooplancton specific excretion rate [0.1/86400 s-1=10 days] 6 fzoolab = 0.5 ! NH4 fraction of zooplankton excretion 6 fdbod = 0.5 ! zooplankton mortality fraction that goes to detritus 6 tmminz = 2.31e-6 ! minimal zooplankton mortality rate [(mmolN/m3)-1 d-1] 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&namlobdet ! biological parameters for detritus 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 taudn = 5.80e-7 ! detritus breakdown rate [0.1/86400 s-1=10 days] 6 fdetlab = 0. ! NH4 fraction of detritus dissolution 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&namlobdom ! biological parameters for DOM 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 taudomn = 6.43e-8 ! DOM breakdown rate [s-1] 6! ! slow remineralization rate of semi-labile dom to nh4 (1 month) 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&namlobsed ! parameters from aphotic layers to sediment 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 sedlam = 3.86e-7 ! time coefficient of POC remineralization in sediments [s-1] 6 sedlostpoc = 0. ! mass of POC lost in sediments 6 vsed = 3.47e-5 ! detritus sedimentation speed [m/s] 6 xhr = -0.858 ! coeff for martin''s remineralisation profile 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&namlobrat ! general coefficients 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 rcchl = 60. ! Carbone/Chlorophyl ratio [mgC.mgChla-1] 6 redf = 6.56 ! redfield ratio (C:N) for phyto 6 reddom = 6.56 ! redfield ratio (C:N) for DOM 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&namlobopt ! optical parameters 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6 xkg0 = 0.0232 ! green absorption coefficient of water 6 xkr0 = 0.225 ! red absorption coefficent of water 6 xkgp = 0.074 ! green absorption coefficient of chl 6 xkrp = 0.037 ! red absorption coefficient of chl 6 xlg = 0.674 ! green chl exposant for absorption 6 xlr = 0.629 ! red chl exposant for absorption 6 rpig = 0.7 ! chla/chla+pheo ratio 6/ 6!''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 6&nampisdbi ! biological diagnostics trends 6!,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 6! ! 2D bio diagnostics units : mmole/m2/s ("key_trdmld_trc") 6! ! name ! title of the field ! units ! 6 pisdiabio(1) = 'NO3PHY' , 'Flux from NO3 to PHY ', 'mmole/m3/s' 6 pisdiabio(2) = 'NH4PHY' , 'Flux from NH4 to PHY ', 'mmole/m3/s' 6 pisdiabio(3) = 'PHYNH4' , 'Flux from PHY to NH4 ', 'mmole/m3/s' 6 pisdiabio(4) = 'PHYDOM' , 'Flux from PHY to DOM ', 'mmole/m3/s' 6 pisdiabio(5) = 'PHYZOO' , 'Flux from PHY to ZOO ', 'mmole/m3/s' 6 pisdiabio(6) = 'PHYDET' , 'Flux from PHY to DET ', 'mmole/m3/s' 6 pisdiabio(7) = 'DETZOO' , 'Flux from DET to ZOO ', 'mmole/m3/s' 6 pisdiabio(8) = 'DETSED' , 'Flux from DET to SED ', 'mmole/m3/s' 6 pisdiabio(9) = 'ZOODET' , 'Flux from ZOO to DET ', 'mmole/m3/s' 6 pisdiabio(10) = 'ZOOBOD' , 'Zooplankton closure ', 'mmole/m3/s' 6 pisdiabio(11) = 'ZOONH4' , 'Flux from ZOO to NH4 ', 'mmole/m3/s' 6 pisdiabio(12) = 'ZOODOM' , 'Flux from ZOO to DOM ', 'mmole/m3/s' 6 pisdiabio(13) = 'NH4NO3' , 'Flux from NH4 to NO3 ', 'mmole/m3/s' 6 pisdiabio(14) = 'DOMNH4' , 'Flux from DOM to NH4 ', 'mmole/m3/s' 6 pisdiabio(15) = 'DETNH4' , 'Flux from DET to NH4 ', 'mmole/m3/s' 6 pisdiabio(16) = 'DETDOM' , 'Flux from DET to DOM ', 'mmole/m3/s' 6 pisdiabio(17) = 'SEDNO3' , 'NO3 remineralization from SED', 'mmole/m3/s' 6/ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | 7 namelist_ref - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 7!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 7!! NEMO/OPA : 1 - run manager (namrun) 7!! namelists 2 - Domain (namcfg, namzgr, namzgr_sco, namdom, namtsd) 7!! 3 - Surface boundary (namsbc, namsbc_ana, namsbc_flx, namsbc_clio, namsbc_core, namsbc_sas 7!! namsbc_cpl, namtra_qsr, namsbc_rnf, 7!! namsbc_apr, namsbc_ssr, namsbc_alb) 7!! 4 - lateral boundary (namlbc, namcla, namagrif, nambdy, nambdy_tide) 7!! 5 - bottom boundary (nambfr, nambbc, nambbl) 7!! 6 - Tracer (nameos, namtra_adv, namtra_ldf, namtra_dmp) 7!! 7 - dynamics (namdyn_adv, namdyn_vor, namdyn_hpg, namdyn_spg, namdyn_ldf) 7!! 8 - Verical physics (namzdf, namzdf_ric, namzdf_tke, namzdf_kpp, namzdf_ddm, namzdf_tmx, namzdf_tmx_new) 7!! 9 - diagnostics (namnc4, namtrd, namspr, namflo, namhsb, namsto) 7!! 10 - miscellaneous (namsol, nammpp, namctl) 7!! 11 - Obs & Assim (namobs, nam_asminc) 7!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 7 7!!====================================================================== 7!! *** Run management namelists *** 7!!====================================================================== 7!! namrun parameters of the run 7!!====================================================================== 7! 7!----------------------------------------------------------------------- 7&namrun ! parameters of the run 7!----------------------------------------------------------------------- 7 nn_no = 0 ! job number (no more used...) 7 cn_exp = "ORCA2" ! experience name 7 nn_it000 = 1 ! first time step 7 nn_itend = 5475 ! last time step (std 5475) 7 nn_date0 = 010101 ! date at nit_0000 (format yyyymmdd) used if ln_rstart=F or (ln_rstart=T and nn_rstctl=0 or 1) 7 nn_leapy = 0 ! Leap year calendar (1) or not (0) 7 ln_rstart = .false. ! start from rest (F) or from a restart file (T) 7 nn_euler = 1 ! = 0 : start with forward time step if ln_rstart=T 7 nn_rstctl = 0 ! restart control ==> activated only if ln_rstart=T 7 ! = 0 nn_date0 read in namelist ; nn_it000 : read in namelist 7 ! = 1 nn_date0 read in namelist ; nn_it000 : check consistancy between namelist and restart 7 ! = 2 nn_date0 read in restart ; nn_it000 : check consistancy between namelist and restart 7 cn_ocerst_in = "restart" ! suffix of ocean restart name (input) 7 cn_ocerst_indir = "." ! directory from which to read input ocean restarts 7 cn_ocerst_out = "restart" ! suffix of ocean restart name (output) 7 cn_ocerst_outdir = "." ! directory in which to write output ocean restarts 7 nn_istate = 0 ! output the initial state (1) or not (0) 7 ln_rst_list = .false. ! output restarts at list of times using nn_stocklist (T) or at set frequency with nn_stock (F) 7 nn_stock = 5475 ! frequency of creation of a restart file (modulo referenced to 1) 7 nn_stocklist = 0,0,0,0,0,0,0,0,0,0 ! List of timesteps when a restart file is to be written 7 nn_write = 5475 ! frequency of write in the output file (modulo referenced to nn_it000) 7 ln_dimgnnn = .false. ! DIMG file format: 1 file for all processors (F) or by processor (T) 7 ln_mskland = .false. ! mask land points in NetCDF outputs (costly: + ~15%) 7 ln_cfmeta = .false. ! output additional data to netCDF files required for compliance with the CF metadata standard 7 ln_clobber = .false. ! clobber (overwrite) an existing file 7 nn_chunksz = 0 ! chunksize (bytes) for NetCDF file (works only with iom_nf90 routines) 7/ 7! 7!!====================================================================== 7!! *** Domain namelists *** 7!!====================================================================== 7!! namcfg parameters of the configuration 7!! namzgr vertical coordinate 7!! namzgr_sco s-coordinate or hybrid z-s-coordinate 7!! namdom space and time domain (bathymetry, mesh, timestep) 7!! namtsd data: temperature & salinity 7!!====================================================================== 7! 7!----------------------------------------------------------------------- 7&namcfg ! parameters of the configuration 7!----------------------------------------------------------------------- 7 cp_cfg = "default" ! name of the configuration 7 cp_cfz = "no zoom" ! name of the zoom of configuration 7 jp_cfg = 0 ! resolution of the configuration 7 jpidta = 10 ! 1st lateral dimension ( >= jpi ) 7 jpjdta = 12 ! 2nd " " ( >= jpj ) 7 jpkdta = 31 ! number of levels ( >= jpk ) 7 jpiglo = 10 ! 1st dimension of global domain --> i =jpidta 7 jpjglo = 12 ! 2nd - - --> j =jpjdta 7 jpizoom = 1 ! left bottom (i,j) indices of the zoom 7 jpjzoom = 1 ! in data domain indices 7 jperio = 0 ! lateral cond. type (between 0 and 6) 7 ! = 0 closed ; = 1 cyclic East-West 7 ! = 2 equatorial symmetric ; = 3 North fold T-point pivot 7 ! = 4 cyclic East-West AND North fold T-point pivot 7 ! = 5 North fold F-point pivot 7 ! = 6 cyclic East-West AND North fold F-point pivot 7 ln_use_jattr = .false. ! use (T) the file attribute: open_ocean_jstart, if present 7 ! in netcdf input files, as the start j-row for reading 7/ 7!----------------------------------------------------------------------- 7&namzgr ! vertical coordinate 7!----------------------------------------------------------------------- 7 ln_zco = .false. ! z-coordinate - full steps (T/F) ("key_zco" may also be defined) 7 ln_zps = .true. ! z-coordinate - partial steps (T/F) 7 ln_sco = .false. ! s- or hybrid z-s-coordinate (T/F) 7 ln_isfcav = .false. ! ice shelf cavity (T/F) 7/ 7!----------------------------------------------------------------------- 7&namzgr_sco ! s-coordinate or hybrid z-s-coordinate 7!----------------------------------------------------------------------- 7 ln_s_sh94 = .true. ! Song & Haidvogel 1994 hybrid S-sigma (T)| 7 ln_s_sf12 = .false. ! Siddorn & Furner 2012 hybrid S-z-sigma (T)| if both are false the NEMO tanh stretching is applied 7 ln_sigcrit = .false. ! use sigma coordinates below critical depth (T) or Z coordinates (F) for Siddorn & Furner stretch 7 ! stretching coefficients for all functions 7 rn_sbot_min = 10.0 ! minimum depth of s-bottom surface (>0) (m) 7 rn_sbot_max = 7000.0 ! maximum depth of s-bottom surface (= ocean depth) (>0) (m) 7 rn_hc = 150.0 ! critical depth for transition to stretched coordinates 7 !!!!!!! Envelop bathymetry 7 rn_rmax = 0.3 ! maximum cut-off r-value allowed (00) or min number of ocean level (<0) 7 rn_e3zps_min= 20. ! partial step thickness is set larger than the minimum of 7 rn_e3zps_rat= 0.1 ! rn_e3zps_min and rn_e3zps_rat*e3t, with 0 fill namsbc_ana ) 7 ln_flx = .false. ! flux formulation (T => fill namsbc_flx ) 7 ln_blk_clio = .false. ! CLIO bulk formulation (T => fill namsbc_clio) 7 ln_blk_core = .true. ! CORE bulk formulation (T => fill namsbc_core) 7 ln_blk_mfs = .false. ! MFS bulk formulation (T => fill namsbc_mfs ) 7 ln_cpl = .false. ! atmosphere coupled formulation ( requires key_oasis3 ) 7 ln_mixcpl = .false. ! forced-coupled mixed formulation ( requires key_oasis3 ) 7 nn_components = 0 ! configuration of the opa-sas OASIS coupling 7 ! =0 no opa-sas OASIS coupling: default single executable configuration 7 ! =1 opa-sas OASIS coupling: multi executable configuration, OPA component 7 ! =2 opa-sas OASIS coupling: multi executable configuration, SAS component 7 ln_apr_dyn = .false. ! Patm gradient added in ocean & ice Eqs. (T => fill namsbc_apr ) 7 nn_ice = 2 ! =0 no ice boundary condition , 7 ! =1 use observed ice-cover , 7 ! =2 ice-model used ("key_lim3" or "key_lim2") 7 nn_ice_embd = 1 ! =0 levitating ice (no mass exchange, concentration/dilution effect) 7 ! =1 levitating ice with mass and salt exchange but no presure effect 7 ! =2 embedded sea-ice (full salt and mass exchanges and pressure) 7 ln_dm2dc = .false. ! daily mean to diurnal cycle on short wave 7 ln_rnf = .true. ! runoffs (T => fill namsbc_rnf) 7 nn_isf = 0 ! ice shelf melting/freezing (/=0 => fill namsbc_isf) 7 ! 0 =no isf 1 = presence of ISF 7 ! 2 = bg03 parametrisation 3 = rnf file for isf 7 ! 4 = ISF fwf specified 7 ! option 1 and 4 need ln_isfcav = .true. (domzgr) 7 ln_ssr = .true. ! Sea Surface Restoring on T and/or S (T => fill namsbc_ssr) 7 nn_fwb = 2 ! FreshWater Budget: =0 unchecked 7 ! =1 global mean of e-p-r set to zero at each time step 7 ! =2 annual global mean of e-p-r set to zero 7 ln_wave = .false. ! Activate coupling with wave (either Stokes Drift or Drag coefficient, or both) (T => fill namsbc_wave) 7 ln_cdgw = .false. ! Neutral drag coefficient read from wave model (T => fill namsbc_wave) 7 ln_sdw = .false. ! Computation of 3D stokes drift (T => fill namsbc_wave) 7 nn_lsm = 0 ! =0 land/sea mask for input fields is not applied (keep empty land/sea mask filename field) , 7 ! =1:n number of iterations of land/sea mask application for input fields (fill land/sea mask filename field) 7 nn_limflx = -1 ! LIM3 Multi-category heat flux formulation (use -1 if LIM3 is not used) 7 ! =-1 Use per-category fluxes, bypass redistributor, forced mode only, not yet implemented coupled 7 ! = 0 Average per-category fluxes (forced and coupled mode) 7 ! = 1 Average and redistribute per-category fluxes, forced mode only, not yet implemented coupled 7 ! = 2 Redistribute a single flux over categories (coupled mode only) 7/ 7!----------------------------------------------------------------------- 7&namsbc_ana ! analytical surface boundary condition 7!----------------------------------------------------------------------- 7 nn_tau000 = 0 ! gently increase the stress over the first ntau_rst time-steps 7 rn_utau0 = 0.5 ! uniform value for the i-stress 7 rn_vtau0 = 0.e0 ! uniform value for the j-stress 7 rn_qns0 = 0.e0 ! uniform value for the total heat flux 7 rn_qsr0 = 0.e0 ! uniform value for the solar radiation 7 rn_emp0 = 0.e0 ! uniform value for the freswater budget (E-P) 7/ 7!----------------------------------------------------------------------- 7&namsbc_flx ! surface boundary condition : flux formulation 7!----------------------------------------------------------------------- 7! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 7! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 7 sn_utau = 'utau' , 24 , 'utau' , .false. , .false., 'yearly' , '' , '' , '' 7 sn_vtau = 'vtau' , 24 , 'vtau' , .false. , .false., 'yearly' , '' , '' , '' 7 sn_qtot = 'qtot' , 24 , 'qtot' , .false. , .false., 'yearly' , '' , '' , '' 7 sn_qsr = 'qsr' , 24 , 'qsr' , .false. , .false., 'yearly' , '' , '' , '' 7 sn_emp = 'emp' , 24 , 'emp' , .false. , .false., 'yearly' , '' , '' , '' 7 7 cn_dir = './' ! root directory for the location of the flux files 7/ 7!----------------------------------------------------------------------- 7&namsbc_clio ! namsbc_clio CLIO bulk formulae 7!----------------------------------------------------------------------- 7! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 7! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 7 sn_utau = 'taux_1m' , -1 , 'sozotaux', .true. , .true. , 'yearly' , '' , '' , '' 7 sn_vtau = 'tauy_1m' , -1 , 'sometauy', .true. , .true. , 'yearly' , '' , '' , '' 7 sn_wndm = 'flx' , -1 , 'socliowi', .true. , .true. , 'yearly' , '' , '' , '' 7 sn_tair = 'flx' , -1 , 'socliot2', .true. , .true. , 'yearly' , '' , '' , '' 7 sn_humi = 'flx' , -1 , 'socliohu', .true. , .true. , 'yearly' , '' , '' , '' 7 sn_ccov = 'flx' , -1 , 'socliocl', .false. , .true. , 'yearly' , '' , '' , '' 7 sn_prec = 'flx' , -1 , 'socliopl', .false. , .true. , 'yearly' , '' , '' , '' 7 7 cn_dir = './' ! root directory for the location of the bulk files are 7/ 7!----------------------------------------------------------------------- 7&namsbc_core ! namsbc_core CORE bulk formulae 7!----------------------------------------------------------------------- 7! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 7! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 7 sn_wndi = 'u_10.15JUNE2009_fill' , 6 , 'U_10_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bicubic_noc.nc' , 'Uwnd' , '' 7 sn_wndj = 'v_10.15JUNE2009_fill' , 6 , 'V_10_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bicubic_noc.nc' , 'Vwnd' , '' 7 sn_qsr = 'ncar_rad.15JUNE2009_fill' , 24 , 'SWDN_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' 7 sn_qlw = 'ncar_rad.15JUNE2009_fill' , 24 , 'LWDN_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' 7 sn_tair = 't_10.15JUNE2009_fill' , 6 , 'T_10_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' 7 sn_humi = 'q_10.15JUNE2009_fill' , 6 , 'Q_10_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' 7 sn_prec = 'ncar_precip.15JUNE2009_fill' , -1 , 'PRC_MOD1', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' 7 sn_snow = 'ncar_precip.15JUNE2009_fill' , -1 , 'SNOW' , .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' 7 sn_tdif = 'taudif_core' , 24 , 'taudif' , .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' 7 7 cn_dir = './' ! root directory for the location of the bulk files 7 ln_taudif = .false. ! HF tau contribution: use "mean of stress module - module of the mean stress" data 7 rn_zqt = 10. ! Air temperature and humidity reference height (m) 7 rn_zu = 10. ! Wind vector reference height (m) 7 rn_pfac = 1. ! multiplicative factor for precipitation (total & snow) 7 rn_efac = 1. ! multiplicative factor for evaporation (0. or 1.) 7 rn_vfac = 0. ! multiplicative factor for ocean/ice velocity 7 ! in the calculation of the wind stress (0.=absolute winds or 1.=relative winds) 7/ 7!----------------------------------------------------------------------- 7&namsbc_mfs ! namsbc_mfs MFS bulk formulae 7!----------------------------------------------------------------------- 7! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 7! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 7 sn_wndi = 'ecmwf' , 6 , 'u10' , .true. , .false. , 'daily' ,'bicubic.nc' , '' , '' 7 sn_wndj = 'ecmwf' , 6 , 'v10' , .true. , .false. , 'daily' ,'bicubic.nc' , '' , '' 7 sn_clc = 'ecmwf' , 6 , 'clc' , .true. , .false. , 'daily' ,'bilinear.nc', '' , '' 7 sn_msl = 'ecmwf' , 6 , 'msl' , .true. , .false. , 'daily' ,'bicubic.nc' , '' , '' 7 sn_tair = 'ecmwf' , 6 , 't2' , .true. , .false. , 'daily' ,'bicubic.nc' , '' , '' 7 sn_rhm = 'ecmwf' , 6 , 'rh' , .true. , .false. , 'daily' ,'bilinear.nc', '' , '' 7 sn_prec = 'ecmwf' , 6 , 'precip' , .true. , .true. , 'daily' ,'bicubic.nc' , '' , '' 7 7 cn_dir = './ECMWF/' ! root directory for the location of the bulk files 7/ 7!----------------------------------------------------------------------- 7&namsbc_cpl ! coupled ocean/atmosphere model ("key_oasis3") 7!----------------------------------------------------------------------- 7! ! description ! multiple ! vector ! vector ! vector ! 7! ! ! categories ! reference ! orientation ! grids ! 7! send 7 sn_snd_temp = 'weighted oce and ice' , 'no' , '' , '' , '' 7 sn_snd_alb = 'weighted ice' , 'no' , '' , '' , '' 7 sn_snd_thick = 'none' , 'no' , '' , '' , '' 7 sn_snd_crt = 'none' , 'no' , 'spherical' , 'eastward-northward' , 'T' 7 sn_snd_co2 = 'coupled' , 'no' , '' , '' , '' 7! receive 7 sn_rcv_w10m = 'none' , 'no' , '' , '' , '' 7 sn_rcv_taumod = 'coupled' , 'no' , '' , '' , '' 7 sn_rcv_tau = 'oce only' , 'no' , 'cartesian' , 'eastward-northward', 'U,V' 7 sn_rcv_dqnsdt = 'coupled' , 'no' , '' , '' , '' 7 sn_rcv_qsr = 'oce and ice' , 'no' , '' , '' , '' 7 sn_rcv_qns = 'oce and ice' , 'no' , '' , '' , '' 7 sn_rcv_emp = 'conservative' , 'no' , '' , '' , '' 7 sn_rcv_rnf = 'coupled' , 'no' , '' , '' , '' 7 sn_rcv_cal = 'coupled' , 'no' , '' , '' , '' 7 sn_rcv_co2 = 'coupled' , 'no' , '' , '' , '' 7! 7 nn_cplmodel = 1 ! Maximum number of models to/from which NEMO is potentialy sending/receiving data 7 ln_usecplmask = .false. ! use a coupling mask file to merge data received from several models 7 ! -> file cplmask.nc with the float variable called cplmask (jpi,jpj,nn_cplmodel) 7/ 7!----------------------------------------------------------------------- 7&namsbc_sas ! analytical surface boundary condition 7!----------------------------------------------------------------------- 7! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 7! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 7 sn_usp = 'sas_grid_U' , 120 , 'vozocrtx' , .true. , .true. , 'yearly' , '' , '' , '' 7 sn_vsp = 'sas_grid_V' , 120 , 'vomecrty' , .true. , .true. , 'yearly' , '' , '' , '' 7 sn_tem = 'sas_grid_T' , 120 , 'sosstsst' , .true. , .true. , 'yearly' , '' , '' , '' 7 sn_sal = 'sas_grid_T' , 120 , 'sosaline' , .true. , .true. , 'yearly' , '' , '' , '' 7 sn_ssh = 'sas_grid_T' , 120 , 'sossheig' , .true. , .true. , 'yearly' , '' , '' , '' 7 sn_e3t = 'sas_grid_T' , 120 , 'e3t_m' , .true. , .true. , 'yearly' , '' , '' , '' 7 sn_frq = 'sas_grid_T' , 120 , 'frq_m' , .true. , .true. , 'yearly' , '' , '' , '' 7 7 ln_3d_uve = .true. ! specify whether we are supplying a 3D u,v and e3 field 7 ln_read_frq = .false. ! specify whether we must read frq or not 7 cn_dir = './' ! root directory for the location of the bulk files are 7/ 7!----------------------------------------------------------------------- 7&namtra_qsr ! penetrative solar radiation 7!----------------------------------------------------------------------- 7! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 7! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 7 sn_chl ='chlorophyll', -1 , 'CHLA' , .true. , .true. , 'yearly' , '' , '' , '' 7 7 cn_dir = './' ! root directory for the location of the runoff files 7 ln_traqsr = .true. ! Light penetration (T) or not (F) 7 ln_qsr_rgb = .true. ! RGB (Red-Green-Blue) light penetration 7 ln_qsr_2bd = .false. ! 2 bands light penetration 7 ln_qsr_bio = .false. ! bio-model light penetration 7 nn_chldta = 1 ! RGB : 2D Chl data (=1), 3D Chl data (=2) or cst value (=0) 7 rn_abs = 0.58 ! RGB & 2 bands: fraction of light (rn_si1) 7 rn_si0 = 0.35 ! RGB & 2 bands: shortess depth of extinction 7 rn_si1 = 23.0 ! 2 bands: longest depth of extinction 7 ln_qsr_ice = .true. ! light penetration for ice-model LIM3 7/ 7!----------------------------------------------------------------------- 7&namsbc_rnf ! runoffs namelist surface boundary condition 7!----------------------------------------------------------------------- 7! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 7! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 7 sn_rnf = 'runoff_core_monthly', -1 , 'sorunoff', .true. , .true. , 'yearly' , '' , '' , '' 7 sn_cnf = 'runoff_core_monthly', 0 , 'socoefr0', .false. , .true. , 'yearly' , '' , '' , '' 7 sn_s_rnf = 'runoffs' , 24 , 'rosaline', .true. , .true. , 'yearly' , '' , '' , '' 7 sn_t_rnf = 'runoffs' , 24 , 'rotemper', .true. , .true. , 'yearly' , '' , '' , '' 7 sn_dep_rnf = 'runoffs' , 0 , 'rodepth' , .false. , .true. , 'yearly' , '' , '' , '' 7 7 cn_dir = './' ! root directory for the location of the runoff files 7 ln_rnf_mouth = .true. ! specific treatment at rivers mouths 7 rn_hrnf = 15.e0 ! depth over which enhanced vertical mixing is used 7 rn_avt_rnf = 1.e-3 ! value of the additional vertical mixing coef. [m2/s] 7 rn_rfact = 1.e0 ! multiplicative factor for runoff 7 ln_rnf_depth = .false. ! read in depth information for runoff 7 ln_rnf_tem = .false. ! read in temperature information for runoff 7 ln_rnf_sal = .false. ! read in salinity information for runoff 7 ln_rnf_depth_ini = .false. ! compute depth at initialisation from runoff file 7 rn_rnf_max = 5.735e-4 ! max value of the runoff climatologie over global domain ( ln_rnf_depth_ini = .true ) 7 rn_dep_max = 150. ! depth over which runoffs is spread ( ln_rnf_depth_ini = .true ) 7 nn_rnf_depth_file = 0 ! create (=1) a runoff depth file or not (=0) 7/ 7!----------------------------------------------------------------------- 7&namsbc_isf ! Top boundary layer (ISF) 7!----------------------------------------------------------------------- 7! ! file name ! frequency (hours) ! variable ! time interpol. ! clim ! 'yearly'/ ! weights ! rotation ! 7! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! 7! nn_isf == 4 7 sn_qisf = 'rnfisf' , -12 ,'sohflisf', .false. , .true. , 'yearly' , '' , '' 7 sn_fwfisf = 'rnfisf' , -12 ,'sowflisf', .false. , .true. , 'yearly' , '' , '' 7! nn_isf == 3 7 sn_rnfisf = 'runoffs' , -12 ,'sofwfisf', .false. , .true. , 'yearly' , '' , '' 7! nn_isf == 2 and 3 7 sn_depmax_isf = 'runoffs' , -12 ,'sozisfmax' , .false. , .true. , 'yearly' , '' , '' 7 sn_depmin_isf = 'runoffs' , -12 ,'sozisfmin' , .false. , .true. , 'yearly' , '' , '' 7! nn_isf == 2 7 sn_Leff_isf = 'rnfisf' , 0 ,'Leff' , .false. , .true. , 'yearly' , '' , '' 7! for all case 7 ln_divisf = .true. ! apply isf melting as a mass flux or in the salinity trend. (maybe I should remove this option as for runoff?) 7! only for nn_isf = 1 or 2 7 rn_gammat0 = 1.0e-4 ! gammat coefficient used in blk formula 7 rn_gammas0 = 1.0e-4 ! gammas coefficient used in blk formula 7! only for nn_isf = 1 7 nn_isfblk = 1 ! 1 ISOMIP ; 2 conservative (3 equation formulation, Jenkins et al. 1991 ??) 7 rn_hisf_tbl = 30. ! thickness of the top boundary layer (Losh et al. 2008) 7 ! 0 => thickness of the tbl = thickness of the first wet cell 7 ln_conserve = .true. ! conservative case (take into account meltwater advection) 7 nn_gammablk = 1 ! 0 = cst Gammat (= gammat/s) 7 ! 1 = velocity dependend Gamma (u* * gammat/s) (Jenkins et al. 2010) 7 ! if you want to keep the cd as in global config, adjust rn_gammat0 to compensate 7 ! 2 = velocity and stability dependent Gamma Holland et al. 1999 7/ 7!----------------------------------------------------------------------- 7&namsbc_apr ! Atmospheric pressure used as ocean forcing or in bulk 7!----------------------------------------------------------------------- 7! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 7! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 7 sn_apr = 'patm' , -1 ,'somslpre', .true. , .true. , 'yearly' , '' , '' , '' 7 7 cn_dir = './' ! root directory for the location of the bulk files 7 rn_pref = 101000. ! reference atmospheric pressure [N/m2]/ 7 ln_ref_apr = .false. ! ref. pressure: global mean Patm (T) or a constant (F) 7 ln_apr_obc = .false. ! inverse barometer added to OBC ssh data 7/ 7!----------------------------------------------------------------------- 7&namsbc_ssr ! surface boundary condition : sea surface restoring 7!----------------------------------------------------------------------- 7! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 7! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 7 sn_sst = 'sst_data' , 24 , 'sst' , .false. , .false., 'yearly' , '' , '' , '' 7 sn_sss = 'sss_data' , -1 , 'sss' , .true. , .true. , 'yearly' , '' , '' , '' 7 7 cn_dir = './' ! root directory for the location of the runoff files 7 nn_sstr = 0 ! add a retroaction term in the surface heat flux (=1) or not (=0) 7 nn_sssr = 2 ! add a damping term in the surface freshwater flux (=2) 7 ! or to SSS only (=1) or no damping term (=0) 7 rn_dqdt = -40. ! magnitude of the retroaction on temperature [W/m2/K] 7 rn_deds = -166.67 ! magnitude of the damping on salinity [mm/day] 7 ln_sssr_bnd = .true. ! flag to bound erp term (associated with nn_sssr=2) 7 rn_sssr_bnd = 4.e0 ! ABS(Max/Min) value of the damping erp term [mm/day] 7/ 7!----------------------------------------------------------------------- 7&namsbc_alb ! albedo parameters 7!----------------------------------------------------------------------- 7 nn_ice_alb = 1 ! parameterization of ice/snow albedo 7 ! 0: Shine & Henderson-Sellers (JGR 1985), giving clear-sky albedo 7 ! 1: "home made" based on Brandt et al. (JClim 2005) and Grenfell & Perovich (JGR 2004), 7 ! giving cloud-sky albedo 7 rn_alb_sdry = 0.85 ! dry snow albedo : 0.80 (nn_ice_alb = 0); 0.85 (nn_ice_alb = 1); obs 0.85-0.87 (cloud-sky) 7 rn_alb_smlt = 0.75 ! melting snow albedo : 0.65 ( '' ) ; 0.75 ( '' ) ; obs 0.72-0.82 ( '' ) 7 rn_alb_idry = 0.60 ! dry ice albedo : 0.72 ( '' ) ; 0.60 ( '' ) ; obs 0.54-0.65 ( '' ) 7 rn_alb_imlt = 0.50 ! bare puddled ice albedo : 0.53 ( '' ) ; 0.50 ( '' ) ; obs 0.49-0.58 ( '' ) 7/ 7!----------------------------------------------------------------------- 7&namberg ! iceberg parameters 7!----------------------------------------------------------------------- 7 ln_icebergs = .false. 7 ln_bergdia = .true. ! Calculate budgets 7 nn_verbose_level = 1 ! Turn on more verbose output if level > 0 7 nn_verbose_write = 15 ! Timesteps between verbose messages 7 nn_sample_rate = 1 ! Timesteps between sampling for trajectory storage 7 ! Initial mass required for an iceberg of each class 7 rn_initial_mass = 8.8e7, 4.1e8, 3.3e9, 1.8e10, 3.8e10, 7.5e10, 1.2e11, 2.2e11, 3.9e11, 7.4e11 7 ! Proportion of calving mass to apportion to each class 7 rn_distribution = 0.24, 0.12, 0.15, 0.18, 0.12, 0.07, 0.03, 0.03, 0.03, 0.02 7 ! Ratio between effective and real iceberg mass (non-dim) 7 ! i.e. number of icebergs represented at a point 7 rn_mass_scaling = 2000, 200, 50, 20, 10, 5, 2, 1, 1, 1 7 ! thickness of newly calved bergs (m) 7 rn_initial_thickness = 40., 67., 133., 175., 250., 250., 250., 250., 250., 250. 7 rn_rho_bergs = 850. ! Density of icebergs 7 rn_LoW_ratio = 1.5 ! Initial ratio L/W for newly calved icebergs 7 ln_operator_splitting = .true. ! Use first order operator splitting for thermodynamics 7 rn_bits_erosion_fraction = 0. ! Fraction of erosion melt flux to divert to bergy bits 7 rn_sicn_shift = 0. ! Shift of sea-ice concn in erosion flux (0 surface CT converted in Pot. Temp. in sbcssm 7 ! ! 7 ! ! S-EOS coefficients : 7 ! ! rd(T,S,Z)*rau0 = -a0*(1+.5*lambda*dT+mu*Z+nu*dS)*dT+b0*dS 7 rn_a0 = 1.6550e-1 ! thermal expension coefficient (nn_eos= 1) 7 rn_b0 = 7.6554e-1 ! saline expension coefficient (nn_eos= 1) 7 rn_lambda1 = 5.9520e-2 ! cabbeling coeff in T^2 (=0 for linear eos) 7 rn_lambda2 = 7.4914e-4 ! cabbeling coeff in S^2 (=0 for linear eos) 7 rn_mu1 = 1.4970e-4 ! thermobaric coeff. in T (=0 for linear eos) 7 rn_mu2 = 1.1090e-5 ! thermobaric coeff. in S (=0 for linear eos) 7 rn_nu = 2.4341e-3 ! cabbeling coeff in T*S (=0 for linear eos) 7/ 7!----------------------------------------------------------------------- 7&namtra_adv ! advection scheme for tracer 7!----------------------------------------------------------------------- 7 ln_traadv_cen2 = .false. ! 2nd order centered scheme 7 ln_traadv_tvd = .true. ! TVD scheme 7 ln_traadv_muscl = .false. ! MUSCL scheme 7 ln_traadv_muscl2 = .false. ! MUSCL2 scheme + cen2 at boundaries 7 ln_traadv_ubs = .false. ! UBS scheme 7 ln_traadv_qck = .false. ! QUICKEST scheme 7 ln_traadv_msc_ups= .false. ! use upstream scheme within muscl 7 ln_traadv_tvd_zts= .false. ! TVD scheme with sub-timestepping of vertical tracer advection 7/ 7!----------------------------------------------------------------------- 7&namtra_adv_mle ! mixed layer eddy parametrisation (Fox-Kemper param) 7!----------------------------------------------------------------------- 7 ln_mle = .true. ! (T) use the Mixed Layer Eddy (MLE) parameterisation 7 rn_ce = 0.06 ! magnitude of the MLE (typical value: 0.06 to 0.08) 7 nn_mle = 1 ! MLE type: =0 standard Fox-Kemper ; =1 new formulation 7 rn_lf = 5.e+3 ! typical scale of mixed layer front (meters) (case rn_mle=0) 7 rn_time = 172800. ! time scale for mixing momentum across the mixed layer (seconds) (case rn_mle=0) 7 rn_lat = 20. ! reference latitude (degrees) of MLE coef. (case rn_mle=1) 7 nn_mld_uv = 0 ! space interpolation of MLD at u- & v-pts (0=min,1=averaged,2=max) 7 nn_conv = 0 ! =1 no MLE in case of convection ; =0 always MLE 7 rn_rho_c_mle = 0.01 ! delta rho criterion used to calculate MLD for FK 7/ 7!---------------------------------------------------------------------------------- 7&namtra_ldf ! lateral diffusion scheme for tracers 7!---------------------------------------------------------------------------------- 7 ! ! Operator type: 7 ln_traldf_lap = .true. ! laplacian operator 7 ln_traldf_bilap = .false. ! bilaplacian operator 7 ! ! Direction of action: 7 ln_traldf_level = .false. ! iso-level 7 ln_traldf_hor = .false. ! horizontal (geopotential) (needs "key_ldfslp" when ln_sco=T) 7 ln_traldf_iso = .true. ! iso-neutral (needs "key_ldfslp") 7 ! ! Griffies parameters (all need "key_ldfslp") 7 ln_traldf_grif = .false. ! use griffies triads 7 ln_traldf_gdia = .false. ! output griffies eddy velocities 7 ln_triad_iso = .false. ! pure lateral mixing in ML 7 ln_botmix_grif = .false. ! lateral mixing on bottom 7 ! ! Coefficients 7 ! Eddy-induced (GM) advection always used with Griffies; otherwise needs "key_traldf_eiv" 7 ! Value rn_aeiv_0 is ignored unless = 0 with Held-Larichev spatially varying aeiv 7 ! (key_traldf_c2d & key_traldf_eiv & key_orca_r2, _r1 or _r05) 7 rn_aeiv_0 = 2000. ! eddy induced velocity coefficient [m2/s] 7 rn_aht_0 = 2000. ! horizontal eddy diffusivity for tracers [m2/s] 7 rn_ahtb_0 = 0. ! background eddy diffusivity for ldf_iso [m2/s] 7 ! (normally=0; not used with Griffies) 7 rn_slpmax = 0.01 ! slope limit 7 rn_chsmag = 1. ! multiplicative factor in Smagorinsky diffusivity 7 rn_smsh = 1. ! Smagorinsky diffusivity: = 0 - use only sheer 7 rn_aht_m = 2000. ! upper limit or stability criteria for lateral eddy diffusivity (m2/s) 7/ 7!----------------------------------------------------------------------- 7&namtra_dmp ! tracer: T & S newtonian damping 7!----------------------------------------------------------------------- 7 ln_tradmp = .true. ! add a damping termn (T) or not (F) 7 nn_zdmp = 0 ! vertical shape =0 damping throughout the water column 7 ! =1 no damping in the mixing layer (kz criteria) 7 ! =2 no damping in the mixed layer (rho crieria) 7 cn_resto = 'resto.nc' ! Name of file containing restoration coefficient field (use dmp_tools to create this) 7/ 7 7!!====================================================================== 7!! *** Dynamics namelists *** 7!!====================================================================== 7!! namdyn_adv formulation of the momentum advection 7!! namdyn_vor advection scheme 7!! namdyn_hpg hydrostatic pressure gradient 7!! namdyn_spg surface pressure gradient (CPP key only) 7!! namdyn_ldf lateral diffusion scheme 7!!====================================================================== 7! 7!----------------------------------------------------------------------- 7&namdyn_adv ! formulation of the momentum advection 7!----------------------------------------------------------------------- 7 ln_dynadv_vec = .true. ! vector form (T) or flux form (F) 7 nn_dynkeg = 0 ! scheme for grad(KE): =0 C2 ; =1 Hollingsworth correction 7 ln_dynadv_cen2= .false. ! flux form - 2nd order centered scheme 7 ln_dynadv_ubs = .false. ! flux form - 3rd order UBS scheme 7 ln_dynzad_zts = .false. ! Use (T) sub timestepping for vertical momentum advection 7/ 7!----------------------------------------------------------------------- 7&nam_vvl ! vertical coordinate options 7!----------------------------------------------------------------------- 7 ln_vvl_zstar = .true. ! zstar vertical coordinate 7 ln_vvl_ztilde = .false. ! ztilde vertical coordinate: only high frequency variations 7 ln_vvl_layer = .false. ! full layer vertical coordinate 7 ln_vvl_ztilde_as_zstar = .false. ! ztilde vertical coordinate emulating zstar 7 ln_vvl_zstar_at_eqtor = .false. ! ztilde near the equator 7 rn_ahe3 = 0.0e0 ! thickness diffusion coefficient 7 rn_rst_e3t = 30.e0 ! ztilde to zstar restoration timescale [days] 7 rn_lf_cutoff = 5.0e0 ! cutoff frequency for low-pass filter [days] 7 rn_zdef_max = 0.9e0 ! maximum fractional e3t deformation 7 ln_vvl_dbg = .true. ! debug prints (T/F) 7/ 7!----------------------------------------------------------------------- 7&namdyn_vor ! option of physics/algorithm (not control by CPP keys) 7!----------------------------------------------------------------------- 7 ln_dynvor_ene = .false. ! enstrophy conserving scheme 7 ln_dynvor_ens = .false. ! energy conserving scheme 7 ln_dynvor_mix = .false. ! mixed scheme 7 ln_dynvor_een = .true. ! energy & enstrophy scheme 7 ln_dynvor_een_old = .false. ! energy & enstrophy scheme - original formulation 7/ 7!----------------------------------------------------------------------- 7&namdyn_hpg ! Hydrostatic pressure gradient option 7!----------------------------------------------------------------------- 7 ln_hpg_zco = .false. ! z-coordinate - full steps 7 ln_hpg_zps = .true. ! z-coordinate - partial steps (interpolation) 7 ln_hpg_sco = .false. ! s-coordinate (standard jacobian formulation) 7 ln_hpg_isf = .false. ! s-coordinate (sco ) adapted to isf 7 ln_hpg_djc = .false. ! s-coordinate (Density Jacobian with Cubic polynomial) 7 ln_hpg_prj = .false. ! s-coordinate (Pressure Jacobian scheme) 7 ln_dynhpg_imp = .false. ! time stepping: semi-implicit time scheme (T) 7 ! centered time scheme (F) 7/ 7!----------------------------------------------------------------------- 7!namdyn_spg ! surface pressure gradient (CPP key only) 7!----------------------------------------------------------------------- 7! ! explicit free surface ("key_dynspg_exp") 7! ! filtered free surface ("key_dynspg_flt") 7! ! split-explicit free surface ("key_dynspg_ts") 7 7!----------------------------------------------------------------------- 7&namdyn_ldf ! lateral diffusion on momentum 7!----------------------------------------------------------------------- 7 ! ! Type of the operator : 7 ln_dynldf_lap = .true. ! laplacian operator 7 ln_dynldf_bilap = .false. ! bilaplacian operator 7 ! ! Direction of action : 7 ln_dynldf_level = .false. ! iso-level 7 ln_dynldf_hor = .true. ! horizontal (geopotential) (require "key_ldfslp" in s-coord.) 7 ln_dynldf_iso = .false. ! iso-neutral (require "key_ldfslp") 7 ! ! Coefficient 7 rn_ahm_0_lap = 40000. ! horizontal laplacian eddy viscosity [m2/s] 7 rn_ahmb_0 = 0. ! background eddy viscosity for ldf_iso [m2/s] 7 rn_ahm_0_blp = 0. ! horizontal bilaplacian eddy viscosity [m4/s] 7 rn_cmsmag_1 = 3. ! constant in laplacian Smagorinsky viscosity 7 rn_cmsmag_2 = 3 ! constant in bilaplacian Smagorinsky viscosity 7 rn_cmsh = 1. ! 1 or 0 , if 0 -use only shear for Smagorinsky viscosity 7 rn_ahm_m_blp = -1.e12 ! upper limit for bilap abs(ahm) < min( dx^4/128rdt, rn_ahm_m_blp) 7 rn_ahm_m_lap = 40000. ! upper limit for lap ahm < min(dx^2/16rdt, rn_ahm_m_lap) 7/ 7 7!!====================================================================== 7!! Tracers & Dynamics vertical physics namelists 7!!====================================================================== 7!! namzdf vertical physics 7!! namzdf_ric richardson number dependent vertical mixing ("key_zdfric") 7!! namzdf_tke TKE dependent vertical mixing ("key_zdftke") 7!! namzdf_kpp KPP dependent vertical mixing ("key_zdfkpp") 7!! namzdf_ddm double diffusive mixing parameterization ("key_zdfddm") 7!! namzdf_tmx tidal mixing parameterization ("key_zdftmx") 7!! namzdf_tmx_new new tidal mixing parameterization ("key_zdftmx_new") 7!!====================================================================== 7! 7!----------------------------------------------------------------------- 7&namzdf ! vertical physics 7!----------------------------------------------------------------------- 7 rn_avm0 = 1.2e-4 ! vertical eddy viscosity [m2/s] (background Kz if not "key_zdfcst") 7 rn_avt0 = 1.2e-5 ! vertical eddy diffusivity [m2/s] (background Kz if not "key_zdfcst") 7 nn_avb = 0 ! profile for background avt & avm (=1) or not (=0) 7 nn_havtb = 0 ! horizontal shape for avtb (=1) or not (=0) 7 ln_zdfevd = .true. ! enhanced vertical diffusion (evd) (T) or not (F) 7 nn_evdm = 0 ! evd apply on tracer (=0) or on tracer and momentum (=1) 7 rn_avevd = 100. ! evd mixing coefficient [m2/s] 7 ln_zdfnpc = .false. ! Non-Penetrative Convective algorithm (T) or not (F) 7 nn_npc = 1 ! frequency of application of npc 7 nn_npcp = 365 ! npc control print frequency 7 ln_zdfexp = .false. ! time-stepping: split-explicit (T) or implicit (F) time stepping 7 nn_zdfexp = 3 ! number of sub-timestep for ln_zdfexp=T 7/ 7!----------------------------------------------------------------------- 7&namzdf_ric ! richardson number dependent vertical diffusion ("key_zdfric" ) 7!----------------------------------------------------------------------- 7 rn_avmri = 100.e-4 ! maximum value of the vertical viscosity 7 rn_alp = 5. ! coefficient of the parameterization 7 nn_ric = 2 ! coefficient of the parameterization 7 rn_ekmfc = 0.7 ! Factor in the Ekman depth Equation 7 rn_mldmin = 1.0 ! minimum allowable mixed-layer depth estimate (m) 7 rn_mldmax =1000.0 ! maximum allowable mixed-layer depth estimate (m) 7 rn_wtmix = 10.0 ! vertical eddy viscosity coeff [m2/s] in the mixed-layer 7 rn_wvmix = 10.0 ! vertical eddy diffusion coeff [m2/s] in the mixed-layer 7 ln_mldw = .true. ! Flag to use or not the mized layer depth param. 7/ 7!----------------------------------------------------------------------- 7&namzdf_tke ! turbulent eddy kinetic dependent vertical diffusion ("key_zdftke") 7!----------------------------------------------------------------------- 7 rn_ediff = 0.1 ! coef. for vertical eddy coef. (avt=rn_ediff*mxl*sqrt(e) ) 7 rn_ediss = 0.7 ! coef. of the Kolmogoroff dissipation 7 rn_ebb = 67.83 ! coef. of the surface input of tke (=67.83 suggested when ln_mxl0=T) 7 rn_emin = 1.e-6 ! minimum value of tke [m2/s2] 7 rn_emin0 = 1.e-4 ! surface minimum value of tke [m2/s2] 7 rn_bshear = 1.e-20 ! background shear (>0) currently a numerical threshold (do not change it) 7 nn_mxl = 2 ! mixing length: = 0 bounded by the distance to surface and bottom 7 ! = 1 bounded by the local vertical scale factor 7 ! = 2 first vertical derivative of mixing length bounded by 1 7 ! = 3 as =2 with distinct disspipative an mixing length scale 7 nn_pdl = 1 ! Prandtl number function of richarson number (=1, avt=pdl(Ri)*avm) or not (=0, avt=avm) 7 ln_mxl0 = .true. ! surface mixing length scale = F(wind stress) (T) or not (F) 7 rn_mxl0 = 0.04 ! surface buoyancy lenght scale minimum value 7 ln_lc = .true. ! Langmuir cell parameterisation (Axell 2002) 7 rn_lc = 0.15 ! coef. associated to Langmuir cells 7 nn_etau = 1 ! penetration of tke below the mixed layer (ML) due to internal & intertial waves 7 ! = 0 no penetration 7 ! = 1 add a tke source below the ML 7 ! = 2 add a tke source just at the base of the ML 7 ! = 3 as = 1 applied on HF part of the stress ("key_oasis3") 7 rn_efr = 0.05 ! fraction of surface tke value which penetrates below the ML (nn_etau=1 or 2) 7 nn_htau = 1 ! type of exponential decrease of tke penetration below the ML 7 ! = 0 constant 10 m length scale 7 ! = 1 0.5m at the equator to 30m poleward of 40 degrees 7/ 7!------------------------------------------------------------------------ 7&namzdf_kpp ! K-Profile Parameterization dependent vertical mixing ("key_zdfkpp", and optionally: 7!------------------------------------------------------------------------ "key_kppcustom" or "key_kpplktb") 7 ln_kpprimix = .true. ! shear instability mixing 7 rn_difmiw = 1.0e-04 ! constant internal wave viscosity [m2/s] 7 rn_difsiw = 0.1e-04 ! constant internal wave diffusivity [m2/s] 7 rn_riinfty = 0.8 ! local Richardson Number limit for shear instability 7 rn_difri = 0.0050 ! maximum shear mixing at Rig = 0 [m2/s] 7 rn_bvsqcon = -0.01e-07 ! Brunt-Vaisala squared for maximum convection [1/s2] 7 rn_difcon = 1. ! maximum mixing in interior convection [m2/s] 7 nn_avb = 0 ! horizontal averaged (=1) or not (=0) on avt and amv 7 nn_ave = 1 ! constant (=0) or profile (=1) background on avt 7/ 7!----------------------------------------------------------------------- 7&namzdf_gls ! GLS vertical diffusion ("key_zdfgls") 7!----------------------------------------------------------------------- 7 rn_emin = 1.e-7 ! minimum value of e [m2/s2] 7 rn_epsmin = 1.e-12 ! minimum value of eps [m2/s3] 7 ln_length_lim = .true. ! limit on the dissipation rate under stable stratification (Galperin et al., 1988) 7 rn_clim_galp = 0.267 ! galperin limit 7 ln_sigpsi = .true. ! Activate or not Burchard 2001 mods on psi schmidt number in the wb case 7 rn_crban = 100. ! Craig and Banner 1994 constant for wb tke flux 7 rn_charn = 70000. ! Charnock constant for wb induced roughness length 7 rn_hsro = 0.02 ! Minimum surface roughness 7 rn_frac_hs = 1.3 ! Fraction of wave height as roughness (if nn_z0_met=2) 7 nn_z0_met = 2 ! Method for surface roughness computation (0/1/2) 7 nn_bc_surf = 1 ! surface condition (0/1=Dir/Neum) 7 nn_bc_bot = 1 ! bottom condition (0/1=Dir/Neum) 7 nn_stab_func = 2 ! stability function (0=Galp, 1= KC94, 2=CanutoA, 3=CanutoB) 7 nn_clos = 1 ! predefined closure type (0=MY82, 1=k-eps, 2=k-w, 3=Gen) 7/ 7!----------------------------------------------------------------------- 7&namzdf_ddm ! double diffusive mixing parameterization ("key_zdfddm") 7!----------------------------------------------------------------------- 7 rn_avts = 1.e-4 ! maximum avs (vertical mixing on salinity) 7 rn_hsbfr = 1.6 ! heat/salt buoyancy flux ratio 7/ 7!----------------------------------------------------------------------- 7&namzdf_tmx ! tidal mixing parameterization ("key_zdftmx") 7!----------------------------------------------------------------------- 7 rn_htmx = 500. ! vertical decay scale for turbulence (meters) 7 rn_n2min = 1.e-8 ! threshold of the Brunt-Vaisala frequency (s-1) 7 rn_tfe = 0.333 ! tidal dissipation efficiency 7 rn_me = 0.2 ! mixing efficiency 7 ln_tmx_itf = .true. ! ITF specific parameterisation 7 rn_tfe_itf = 1. ! ITF tidal dissipation efficiency 7/ 7!----------------------------------------------------------------------- 7&namzdf_tmx_new ! new tidal mixing parameterization ("key_zdftmx_new") 7!----------------------------------------------------------------------- 7 nn_zpyc = 1 ! pycnocline-intensified dissipation scales as N (=1) or N^2 (=2) 7 ln_mevar = .true. ! variable (T) or constant (F) mixing efficiency 7 ln_tsdiff = .true. ! account for differential T/S mixing (T) or not (F) 7/ 7!!====================================================================== 7!! *** Miscellaneous namelists *** 7!!====================================================================== 7!! namsol elliptic solver / island / free surface 7!! nammpp Massively Parallel Processing ("key_mpp_mpi) 7!! namctl Control prints & Benchmark 7!! namc1d 1D configuration options ("key_c1d") 7!! namc1d_uvd data: U & V currents ("key_c1d") 7!! namc1d_dyndmp U & V newtonian damping ("key_c1d") 7!! namsto Stochastic parametrization of EOS 7!!====================================================================== 7! 7!----------------------------------------------------------------------- 7&namsol ! elliptic solver / island / free surface 7!----------------------------------------------------------------------- 7 nn_solv = 1 ! elliptic solver: =1 preconditioned conjugate gradient (pcg) 7 ! =2 successive-over-relaxation (sor) 7 nn_sol_arp = 0 ! absolute/relative (0/1) precision convergence test 7 rn_eps = 1.e-6 ! absolute precision of the solver 7 nn_nmin = 300 ! minimum of iterations for the SOR solver 7 nn_nmax = 800 ! maximum of iterations for the SOR solver 7 nn_nmod = 10 ! frequency of test for the SOR solver 7 rn_resmax = 1.e-10 ! absolute precision for the SOR solver 7 rn_sor = 1.92 ! optimal coefficient for SOR solver (to be adjusted with the domain) 7/ 7!----------------------------------------------------------------------- 7&nammpp ! Massively Parallel Processing ("key_mpp_mpi) 7!----------------------------------------------------------------------- 7 cn_mpi_send = 'I' ! mpi send/recieve type ='S', 'B', or 'I' for standard send, 7 ! buffer blocking send or immediate non-blocking sends, resp. 7 nn_buffer = 0 ! size in bytes of exported buffer ('B' case), 0 no exportation 7 ln_nnogather= .false. ! activate code to avoid mpi_allgather use at the northfold 7 jpni = 0 ! jpni number of processors following i (set automatically if < 1) 7 jpnj = 0 ! jpnj number of processors following j (set automatically if < 1) 7 jpnij = 0 ! jpnij number of local domains (set automatically if < 1) 7/ 7!----------------------------------------------------------------------- 7&namctl ! Control prints & Benchmark 7!----------------------------------------------------------------------- 7 ln_ctl = .false. ! trends control print (expensive!) 7 nn_print = 0 ! level of print (0 no extra print) 7 nn_ictls = 0 ! start i indice of control sum (use to compare mono versus 7 nn_ictle = 0 ! end i indice of control sum multi processor runs 7 nn_jctls = 0 ! start j indice of control over a subdomain) 7 nn_jctle = 0 ! end j indice of control 7 nn_isplt = 1 ! number of processors in i-direction 7 nn_jsplt = 1 ! number of processors in j-direction 7 nn_bench = 0 ! Bench mode (1/0): CAUTION use zero except for bench 7 ! (no physical validity of the results) 7 nn_timing = 0 ! timing by routine activated (=1) creates timing.output file, or not (=0) 7/ 7!----------------------------------------------------------------------- 7&namc1d_uvd ! data: U & V currents ("key_c1d") 7!----------------------------------------------------------------------- 7! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 7! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 7 sn_ucur = 'ucurrent' , -1 ,'u_current', .false. , .true. , 'monthly' , '' , 'Ume' , '' 7 sn_vcur = 'vcurrent' , -1 ,'v_current', .false. , .true. , 'monthly' , '' , 'Vme' , '' 7! 7 cn_dir = './' ! root directory for the location of the files 7 ln_uvd_init = .false. ! Initialisation of ocean U & V with U & V input data (T) or not (F) 7 ln_uvd_dyndmp = .false. ! damping of ocean U & V toward U & V input data (T) or not (F) 7/ 7!----------------------------------------------------------------------- 7&namc1d_dyndmp ! U & V newtonian damping ("key_c1d") 7!----------------------------------------------------------------------- 7 ln_dyndmp = .false. ! add a damping term (T) or not (F) 7/ 7!----------------------------------------------------------------------- 7&namsto ! Stochastic parametrization of EOS 7!----------------------------------------------------------------------- 7 ln_rststo = .false. ! start from mean parameter (F) or from restart file (T) 7 ln_rstseed = .true. ! read seed of RNG from restart file 7 cn_storst_in = "restart_sto" ! suffix of stochastic parameter restart file (input) 7 cn_storst_out = "restart_sto" ! suffix of stochastic parameter restart file (output) 7 7 ln_sto_eos = .false. ! stochastic equation of state 7 nn_sto_eos = 1 ! number of independent random walks 7 rn_eos_stdxy = 1.4 ! random walk horz. standard deviation (in grid points) 7 rn_eos_stdz = 0.7 ! random walk vert. standard deviation (in grid points) 7 rn_eos_tcor = 1440.0 ! random walk time correlation (in timesteps) 7 nn_eos_ord = 1 ! order of autoregressive processes 7 nn_eos_flt = 0 ! passes of Laplacian filter 7 rn_eos_lim = 2.0 ! limitation factor (default = 3.0) 7/ 7 7!!====================================================================== 7!! *** Diagnostics namelists *** 7!!====================================================================== 7!! namnc4 netcdf4 chunking and compression settings ("key_netcdf4") 7!! namtrd dynamics and/or tracer trends 7!! namptr Poleward Transport Diagnostics 7!! namflo float parameters ("key_float") 7!! namhsb Heat and salt budgets 7!!====================================================================== 7! 7!----------------------------------------------------------------------- 7&namnc4 ! netcdf4 chunking and compression settings ("key_netcdf4") 7!----------------------------------------------------------------------- 7 nn_nchunks_i= 4 ! number of chunks in i-dimension 7 nn_nchunks_j= 4 ! number of chunks in j-dimension 7 nn_nchunks_k= 31 ! number of chunks in k-dimension 7 ! setting nn_nchunks_k = jpk will give a chunk size of 1 in the vertical which 7 ! is optimal for postprocessing which works exclusively with horizontal slabs 7 ln_nc4zip = .true. ! (T) use netcdf4 chunking and compression 7 ! (F) ignore chunking information and produce netcdf3-compatible files 7/ 7!----------------------------------------------------------------------- 7&namtrd ! diagnostics on dynamics and/or tracer trends 7! ! and/or mixed-layer trends and/or barotropic vorticity 7!----------------------------------------------------------------------- 7 ln_glo_trd = .false. ! (T) global domain averaged diag for T, T^2, KE, and PE 7 ln_dyn_trd = .false. ! (T) 3D momentum trend output 7 ln_dyn_mxl = .FALSE. ! (T) 2D momentum trends averaged over the mixed layer (not coded yet) 7 ln_vor_trd = .FALSE. ! (T) 2D barotropic vorticity trends (not coded yet) 7 ln_KE_trd = .false. ! (T) 3D Kinetic Energy trends 7 ln_PE_trd = .false. ! (T) 3D Potential Energy trends 7 ln_tra_trd = .FALSE. ! (T) 3D tracer trend output 7 ln_tra_mxl = .false. ! (T) 2D tracer trends averaged over the mixed layer (not coded yet) 7 nn_trd = 365 ! print frequency (ln_glo_trd=T) (unit=time step) 7/ 7!!gm nn_ctls = 0 ! control surface type in mixed-layer trends (0,1 or n /seconds ; =86400. -> /day) 7!!gm cn_trdrst_in = "restart_mld" ! suffix of ocean restart name (input) 7!!gm cn_trdrst_out = "restart_mld" ! suffix of ocean restart name (output) 7!!gm ln_trdmld_restart = .false. ! restart for ML diagnostics 7!!gm ln_trdmld_instant = .false. ! flag to diagnose trends of instantantaneous or mean ML T/S 7!!gm 7!----------------------------------------------------------------------- 7&namflo ! float parameters ("key_float") 7!----------------------------------------------------------------------- 7 jpnfl = 1 ! total number of floats during the run 7 jpnnewflo = 0 ! number of floats for the restart 7 ln_rstflo = .false. ! float restart (T) or not (F) 7 nn_writefl = 75 ! frequency of writing in float output file 7 nn_stockfl = 5475 ! frequency of creation of the float restart file 7 ln_argo = .false. ! Argo type floats (stay at the surface each 10 days) 7 ln_flork4 = .false. ! trajectories computed with a 4th order Runge-Kutta (T) 7 ! or computed with Blanke' scheme (F) 7 ln_ariane = .true. ! Input with Ariane tool convention(T) 7 ln_flo_ascii = .true. ! Output with Ariane tool netcdf convention(F) or ascii file (T) 7/ 7!----------------------------------------------------------------------- 7&namptr ! Poleward Transport Diagnostic 7!----------------------------------------------------------------------- 7 ln_diaptr = .false. ! Poleward heat and salt transport (T) or not (F) 7 ln_subbas = .false. ! Atlantic/Pacific/Indian basins computation (T) or not 7/ 7!----------------------------------------------------------------------- 7&namhsb ! Heat and salt budgets 7!----------------------------------------------------------------------- 7 ln_diahsb = .false. ! check the heat and salt budgets (T) or not (F) 7/ 7!----------------------------------------------------------------------- 7&nam_diaharm ! Harmonic analysis of tidal constituents ('key_diaharm') 7!----------------------------------------------------------------------- 7 nit000_han = 1 ! First time step used for harmonic analysis 7 nitend_han = 75 ! Last time step used for harmonic analysis 7 nstep_han = 15 ! Time step frequency for harmonic analysis 7 tname(1) = 'M2' ! Name of tidal constituents 7 tname(2) = 'K1' 7/ 7!----------------------------------------------------------------------- 7&namdct ! transports through sections 7!----------------------------------------------------------------------- 7 nn_dct = 15 ! time step frequency for transports computing 7 nn_dctwri = 15 ! time step frequency for transports writing 7 nn_secdebug = 112 ! 0 : no section to debug 7 ! -1 : debug all section 7 ! 0 < n : debug section number n 7/ 7 7!!====================================================================== 7!! *** Observation & Assimilation namelists *** 7!!====================================================================== 7!! namobs observation and model comparison ('key_diaobs') 7!! nam_asminc assimilation increments ('key_asminc') 7!!====================================================================== 7! 7!----------------------------------------------------------------------- 7&namobs ! observation usage switch ('key_diaobs') 7!----------------------------------------------------------------------- 7 ln_t3d = .false. ! Logical switch for T profile observations 7 ln_s3d = .false. ! Logical switch for S profile observations 7 ln_ena = .false. ! Logical switch for ENACT insitu data set 7 ln_cor = .false. ! Logical switch for Coriolis insitu data set 7 ln_profb = .false. ! Logical switch for feedback insitu data set 7 ln_sla = .false. ! Logical switch for SLA observations 7 ln_sladt = .false. ! Logical switch for AVISO SLA data 7 ln_slafb = .false. ! Logical switch for feedback SLA data 7 ln_ssh = .false. ! Logical switch for SSH observations 7 ln_sst = .false. ! Logical switch for SST observations 7 ln_reysst = .false. ! Logical switch for Reynolds observations 7 ln_ghrsst = .false. ! Logical switch for GHRSST observations 7 ln_sstfb = .false. ! Logical switch for feedback SST data 7 ln_sss = .false. ! Logical switch for SSS observations 7 ln_seaice = .false. ! Logical switch for Sea Ice observations 7 ln_vel3d = .false. ! Logical switch for velocity observations 7 ln_velavcur= .false ! Logical switch for velocity daily av. cur. 7 ln_velhrcur= .false ! Logical switch for velocity high freq. cur. 7 ln_velavadcp = .false. ! Logical switch for velocity daily av. ADCP 7 ln_velhradcp = .false. ! Logical switch for velocity high freq. ADCP 7 ln_velfb = .false. ! Logical switch for feedback velocity data 7 ln_grid_global = .false. ! Global distribtion of observations 7 ln_grid_search_lookup = .false. ! Logical switch for obs grid search w/lookup table 7 grid_search_file = 'grid_search' ! Grid search lookup file header 7! All of the *files* variables below are arrays. Use namelist_cfg to add more files 7 enactfiles = 'enact.nc' ! ENACT input observation file names (specify full array in namelist_cfg) 7 coriofiles = 'corio.nc' ! Coriolis input observation file name 7 profbfiles = 'profiles_01.nc' ! Profile feedback input observation file name 7 ln_profb_enatim = .false ! Enact feedback input time setting switch 7 slafilesact = 'sla_act.nc' ! Active SLA input observation file names 7 slafilespas = 'sla_pass.nc' ! Passive SLA input observation file names 7 slafbfiles = 'sla_01.nc' ! slafbfiles: Feedback SLA input observation file names 7 sstfiles = 'ghrsst.nc' ! GHRSST input observation file names 7 sstfbfiles = 'sst_01.nc' ! Feedback SST input observation file names 7 seaicefiles = 'seaice_01.nc' ! Sea Ice input observation file names 7 velavcurfiles = 'velavcurfile.nc' ! Vel. cur. daily av. input file name 7 velhrcurfiles = 'velhrcurfile.nc' ! Vel. cur. high freq. input file name 7 velavadcpfiles = 'velavadcpfile.nc' ! Vel. ADCP daily av. input file name 7 velhradcpfiles = 'velhradcpfile.nc' ! Vel. ADCP high freq. input file name 7 velfbfiles = 'velfbfile.nc' ! Vel. feedback input observation file name 7 dobsini = 20000101.000000 ! Initial date in window YYYYMMDD.HHMMSS 7 dobsend = 20010101.000000 ! Final date in window YYYYMMDD.HHMMSS 7 n1dint = 0 ! Type of vertical interpolation method 7 n2dint = 0 ! Type of horizontal interpolation method 7 ln_nea = .false. ! Rejection of observations near land switch 7 nmsshc = 0 ! MSSH correction scheme 7 mdtcorr = 1.61 ! MDT correction 7 mdtcutoff = 65.0 ! MDT cutoff for computed correction 7 ln_altbias = .false. ! Logical switch for alt bias 7 ln_ignmis = .true. ! Logical switch for ignoring missing files 7 endailyavtypes = 820 ! ENACT daily average types - array (use namelist_cfg to set more values) 7/ 7!----------------------------------------------------------------------- 7&nam_asminc ! assimilation increments ('key_asminc') 7!----------------------------------------------------------------------- 7 ln_bkgwri = .false. ! Logical switch for writing out background state 7 ln_trainc = .false. ! Logical switch for applying tracer increments 7 ln_dyninc = .false. ! Logical switch for applying velocity increments 7 ln_sshinc = .false. ! Logical switch for applying SSH increments 7 ln_asmdin = .false. ! Logical switch for Direct Initialization (DI) 7 ln_asmiau = .false. ! Logical switch for Incremental Analysis Updating (IAU) 7 nitbkg = 0 ! Timestep of background in [0,nitend-nit000-1] 7 nitdin = 0 ! Timestep of background for DI in [0,nitend-nit000-1] 7 nitiaustr = 1 ! Timestep of start of IAU interval in [0,nitend-nit000-1] 7 nitiaufin = 15 ! Timestep of end of IAU interval in [0,nitend-nit000-1] 7 niaufn = 0 ! Type of IAU weighting function 7 ln_salfix = .false. ! Logical switch for ensuring that the sa > salfixmin 7 salfixmin = -9999 ! Minimum salinity after applying the increments 7 nn_divdmp = 0 ! Number of iterations of divergence damping operator 7/ 7!----------------------------------------------------------------------- 7&namsbc_wave ! External fields from wave model 7!----------------------------------------------------------------------- 7! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 7! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 7 sn_cdg = 'cdg_wave' , 1 , 'drag_coeff' , .true. , .false. , 'daily' , '' , '' , '' 7 sn_usd = 'sdw_wave' , 1 , 'u_sd2d' , .true. , .false. , 'daily' , '' , '' , '' 7 sn_vsd = 'sdw_wave' , 1 , 'v_sd2d' , .true. , .false. , 'daily' , '' , '' , '' 7 sn_wn = 'sdw_wave' , 1 , 'wave_num' , .true. , .false. , 'daily' , '' , '' , '' 7! 7 cn_dir_cdg = './' ! root directory for the location of drag coefficient files 7/ 7!----------------------------------------------------------------------- 7&namdyn_nept ! Neptune effect (simplified: lateral and vertical diffusions removed) 7!----------------------------------------------------------------------- 7 ! Suggested lengthscale values are those of Eby & Holloway (1994) for a coarse model 7 ln_neptsimp = .false. ! yes/no use simplified neptune 7 7 ln_smooth_neptvel = .false. ! yes/no smooth zunep, zvnep 7 rn_tslse = 1.2e4 ! value of lengthscale L at the equator 7 rn_tslsp = 3.0e3 ! value of lengthscale L at the pole 7 ! Specify whether to ramp down the Neptune velocity in shallow 7 ! water, and if so the depth range controlling such ramping down 7 ln_neptramp = .true. ! ramp down Neptune velocity in shallow water 7 rn_htrmin = 100.0 ! min. depth of transition range 7 rn_htrmax = 200.0 ! max. depth of transition range 7/ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | 8 namelist_top_cfg - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 8!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 8!! NEMO/TOP1 : Configuration namelist : used to overwrite defaults values defined in SHARED/namelist_top_ref 8!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 8!----------------------------------------------------------------------- 8&namtrc_run ! run information 8!----------------------------------------------------------------------- 8 ln_top_euler = .true. ! use Euler time-stepping for TOP 8 ln_rsttr=.TRUE. ! AUTO - start from a restart file (T) or not (F) 8 nn_rsttr=2 ! AUTO - restart control = 0 initial time step is not compared to the restart file value 8 ! = 1 do not use the value in the restart file 8 ! = 2 calendar parameters read in the restart file 8 cn_trcrst_in = "restart_trc" ! suffix of pass. sn_tracer restart name (input) 8 cn_trcrst_out = "restart_trc" ! suffix of pass. sn_tracer restart name (output) 8/ 8!----------------------------------------------------------------------- 8&namtrc ! tracers definition 8!----------------------------------------------------------------------- 8 ln_trcdta = .true. ! Initialisation from data input file (T) or not (F) 8 ln_trcdmp_clo = .true. ! restoring on closed seas (T) or not (F) 8 8 8! ! name ! title of the field ! initial data ! initial data ! save ! 8! ! ! ! units ! from file ! or not ! 8! ! ! ! ! or not ! ! 8 sn_tracer(1) = 'DIC ' , 'Dissolved inorganic Concentration ', 'mol-C/L' , .true. , .true. 8 sn_tracer(2) = 'Alkalini' , 'Total Alkalinity Concentration ', 'eq/L ' , .true. , .true. 8 sn_tracer(3) = 'O2 ' , 'Dissolved Oxygen Concentration ', 'mol-C/L' , .true. , .true. 8 sn_tracer(4) = 'CaCO3 ' , 'Calcite Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(5) = 'PO4 ' , 'Phosphate Concentration ', 'mol-C/L' , .true. , .true. 8 sn_tracer(6) = 'POC ' , 'Small organic carbon Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(7) = 'Si ' , 'Silicate Concentration ', 'mol-C/L' , .true. , .true. 8 sn_tracer(8) = 'PHY ' , 'Nanophytoplankton Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(9) = 'ZOO ' , 'Microzooplankton Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(10) = 'DOC ' , 'Dissolved organic Concentration ', 'mol-C/L' , .true. , .true. 8 sn_tracer(11) = 'PHY2 ' , 'Diatoms Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(12) = 'ZOO2 ' , 'Mesozooplankton Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(13) = 'DSi ' , 'Diatoms Silicate Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(14) = 'Fer ' , 'Dissolved Iron Concentration ', 'mol-C/L' , .true. , .true. 8 sn_tracer(15) = 'BFe ' , 'Big iron particles Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(16) = 'GOC ' , 'Big organic carbon Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(17) = 'SFe ' , 'Small iron particles Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(18) = 'DFe ' , 'Diatoms iron Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(19) = 'GSi ' , 'Sinking biogenic Silicate Concentration', 'mol-C/L' , .false. , .true. 8 sn_tracer(20) = 'NFe ' , 'Nano iron Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(21) = 'NCHL ' , 'Nano chlorophyl Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(22) = 'DCHL ' , 'Diatoms chlorophyl Concentration ', 'mol-C/L' , .false. , .true. 8 sn_tracer(23) = 'NO3 ' , 'Nitrates Concentration ', 'mol-C/L' , .true. , .true. 8 sn_tracer(24) = 'NH4 ' , 'Ammonium Concentration ', 'mol-C/L' , .false. , .true. 8/ 8!----------------------------------------------------------------------- 8&namtrc_dta ! Initialisation from data input file 8!----------------------------------------------------------------------- 8! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 8! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 8 sn_trcdta(1) = 'DIC_GLODAPv2.1_annual_eORCA_R1.nc' , -12 , 'PiDIC' , .false. , .true. , 'yearly' , '' , '' , '' 8 sn_trcdta(2) = 'Alkalini_GLODAPv2.1_annual_eORCA_R1.nc', -12 , 'Alkalini', .false. , .true. , 'yearly' , '' , '' , '' 8 sn_trcdta(3) = 'O2_WOA2009_monthly_eORCA_R1.nc' , -1 , 'O2' , .true. , .true. , 'yearly' , '' , '' , '' 8 sn_trcdta(5) = 'PO4_WOA2009_monthly_eORCA_R1.nc' , -1 , 'PO4' , .true. , .true. , 'yearly' , '' , '' , '' 8 sn_trcdta(7) = 'Si_WOA2009_monthly_eORCA_R1.nc' , -1 , 'Si' , .true. , .true. , 'yearly' , '' , '' , '' 8 sn_trcdta(10) = 'DOC_PISCES_monthly_eORCA_R1.nc' , -1 , 'DOC' , .true. , .true. , 'yearly' , '' , '' , '' 8 sn_trcdta(14) = 'Fer_PISCES_monthly_eORCA_R1.nc' , -1 , 'Fer' , .true. , .true. , 'yearly' , '' , '' , '' 8 sn_trcdta(23) = 'NO3_WOA2009_monthly_eORCA_R1.nc' , -1 , 'NO3' , .true. , .true. , 'yearly' , '' , '' , '' 8 rn_trfac(1) = 1.028e-06 ! multiplicative factor 8 rn_trfac(2) = 1.028e-06 ! - - - - 8 rn_trfac(3) = 44.6e-06 ! - - - - 8 rn_trfac(5) = 122.0e-06 ! - - - - 8 rn_trfac(7) = 1.0e-06 ! - - - - 8 rn_trfac(10) = 1.0e-06 ! - - - - 8 rn_trfac(14) = 1.0e-06 ! - - - - 8 rn_trfac(23) = 7.6e-06 ! - - - - 8/ 8!----------------------------------------------------------------------- 8&namtrc_adv ! advection scheme for passive tracer 8!----------------------------------------------------------------------- 8 ln_trcadv_tvd = .false. ! TVD scheme 8 ln_trcadv_muscl = .true. ! MUSCL scheme 8/ 8!----------------------------------------------------------------------- 8&namtrc_ldf ! lateral diffusion scheme for passive tracer 8!----------------------------------------------------------------------- 8 rn_fact_lap = 15. ! enhanced zonal eddy diffusivity 8/ 8!----------------------------------------------------------------------- 8&namtrc_zdf ! vertical physics 8!----------------------------------------------------------------------- 8/ 8!----------------------------------------------------------------------- 8&namtrc_rad ! treatment of negative concentrations 8!----------------------------------------------------------------------- 8/ 8!----------------------------------------------------------------------- 8&namtrc_dmp ! passive tracer newtonian damping 8!----------------------------------------------------------------------- 8/ 8!----------------------------------------------------------------------- 8&namtrc ! tracers definition 8!----------------------------------------------------------------------- 8/ 8!----------------------------------------------------------------------- 8&namtrc_ice ! Representation of sea ice growth & melt effects 8!----------------------------------------------------------------------- 8/ 8!----------------------------------------------------------------------- 8&namtrc_trd ! diagnostics on tracer trends ('key_trdtrc') 8! or mixed-layer trends ('key_trdmld_trc') 8!---------------------------------------------------------------------- 8/ 8!----------------------------------------------------------------------- 8&namtrc_dia ! parameters for passive tracer additional diagnostics 8!---------------------------------------------------------------------- 8/ 8!---------------------------------------------------------------------- 8&namtrc_bc ! data for boundary conditions 8!----------------------------------------------------------------------- 8/ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | 9 namelist_top_ref - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 9!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 9!! NEMO/TOP1 : - tracer run information (namtrc_run) 9!! - tracer definition (namtrc ) 9!! - tracer data initialisation (namtrc_dta) 9!! - tracer advection (namtrc_adv) 9!! - tracer lateral diffusion (namtrc_ldf) 9!! - tracer vertical physics (namtrc_zdf) 9!! - tracer newtonian damping (namtrc_dmp) 9!! - dynamical tracer trends (namtrc_trd) 9!! - tracer output diagonstics (namtrc_dia) 9!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 9!----------------------------------------------------------------------- 9&namtrc_run ! run information 9!----------------------------------------------------------------------- 9 nn_dttrc = 1 ! time step frequency for passive sn_tracers 9 nn_writetrc = 5475 ! time step frequency for sn_tracer outputs 9 ln_top_euler = .false. ! use Euler time-stepping for TOP 9 ln_rsttr = .false. ! start from a restart file (T) or not (F) 9 nn_rsttr = 0 ! restart control = 0 initial time step is not compared to the restart file value 9 ! = 1 do not use the value in the restart file 9 ! = 2 calendar parameters read in the restart file 9 cn_trcrst_in = "restart_trc" ! suffix of pass. sn_tracer restart name (input) 9 cn_trcrst_indir = "." ! directory from which to read input passive tracer restarts 9 cn_trcrst_out = "restart_trc" ! suffix of pass. sn_tracer restart name (output) 9 cn_trcrst_outdir = "." ! directory to which to write output passive tracer restarts 9/ 9!----------------------------------------------------------------------- 9&namtrc ! tracers definition 9!----------------------------------------------------------------------- 9 ln_trcdta = .true. ! Initialisation from data input file (T) or not (F) 9 ln_trcdmp = .false. ! add a damping termn (T) or not (F) 9 ln_trcdmp_clo = .false. ! damping term (T) or not (F) on closed seas 9/ 9!----------------------------------------------------------------------- 9&namtrc_dta ! Initialisation from data input file 9!----------------------------------------------------------------------- 9! 9 cn_dir = './' ! root directory for the location of the data files 9/ 9!----------------------------------------------------------------------- 9&namtrc_adv ! advection scheme for passive tracer 9!----------------------------------------------------------------------- 9 ln_trcadv_cen2 = .false. ! 2nd order centered scheme 9 ln_trcadv_tvd = .true. ! TVD scheme 9 ln_trcadv_muscl = .false. ! MUSCL scheme 9 ln_trcadv_muscl2 = .false. ! MUSCL2 scheme + cen2 at boundaries 9 ln_trcadv_ubs = .false. ! UBS scheme 9 ln_trcadv_qck = .false. ! QUICKEST scheme 9 ln_trcadv_msc_ups = .false. ! use upstream scheme within muscl 9/ 9!----------------------------------------------------------------------- 9&namtrc_ldf ! lateral diffusion scheme for passive tracer 9!----------------------------------------------------------------------- 9! ! Type of the operator : 9 ln_trcldf_lap = .true. ! laplacian operator 9 ln_trcldf_bilap = .false. ! bilaplacian operator 9 ! Direction of action : 9 ln_trcldf_level = .false. ! iso-level 9 ln_trcldf_hor = .false. ! horizontal (geopotential) (require "key_ldfslp" when ln_sco=T) 9 ln_trcldf_iso = .true. ! iso-neutral (require "key_ldfslp") 9! ! Coefficient 9 rn_ahtrc_0 = 2000. ! horizontal eddy diffusivity for tracers [m2/s] 9 rn_ahtrb_0 = 0. ! background eddy diffusivity for ldf_iso [m2/s] 9 rn_fact_lap = 1. ! enhanced zonal eddy diffusivity 9/ 9!----------------------------------------------------------------------- 9&namtrc_zdf ! vertical physics 9!----------------------------------------------------------------------- 9 ln_trczdf_exp = .false. ! split explicit (T) or implicit (F) time stepping 9 nn_trczdf_exp = 3 ! number of sub-timestep for ln_trczdfexp=T 9/ 9!----------------------------------------------------------------------- 9&namtrc_rad ! treatment of negative concentrations 9!----------------------------------------------------------------------- 9 ln_trcrad = .true. ! artificially correct negative concentrations (T) or not (F) 9/ 9!----------------------------------------------------------------------- 9&namtrc_dmp ! passive tracer newtonian damping 9!----------------------------------------------------------------------- 9 nn_zdmp_tr = 1 ! vertical shape =0 damping throughout the water column 9 ! =1 no damping in the mixing layer (kz criteria) 9 ! =2 no damping in the mixed layer (rho crieria) 9 cn_resto_tr = 'resto_tr.nc' ! create a damping.coeff NetCDF file (=1) or not (=0) 9/ 9!----------------------------------------------------------------------- 9&namtrc_ice ! Representation of sea ice growth & melt effects 9!----------------------------------------------------------------------- 9 nn_ice_tr = -1 ! tracer concentration in sea ice 9 ! =-1 (no vvl: identical cc in ice and ocean / vvl: cc_ice = 0) 9 ! = 0 (no vvl: cc_ice = zero / vvl: cc_ice = ) 9 ! = 1 prescribed to a namelist value (implemented in pisces only) 9/ 9!----------------------------------------------------------------------- 9&namtrc_trd ! diagnostics on tracer trends ('key_trdtrc') 9! or mixed-layer trends ('key_trdmld_trc') 9!---------------------------------------------------------------------- 9 nn_trd_trc = 5475 ! time step frequency and tracers trends 9 nn_ctls_trc = 0 ! control surface type in mixed-layer trends (0,1 or n /seconds ; =86400. -> /day) 9 ln_trdmld_trc_restart = .false. ! restart for ML diagnostics 9 ln_trdmld_trc_instant = .true. ! flag to diagnose trends of instantantaneous or mean ML T/S 9 ln_trdtrc(1) = .true. 9 ln_trdtrc(2) = .true. 9 ln_trdtrc(23) = .true. 9/ 9!----------------------------------------------------------------------- 9&namtrc_dia ! parameters for passive tracer additional diagnostics 9!---------------------------------------------------------------------- 9 ln_diatrc = .true. ! save additional diag. (T) or not (F) 9 ln_diabio = .true. ! output biological trends 9 nn_writedia = 5475 ! time step frequency for diagnostics 9 nn_writebio = 10 !: frequency of biological outputs 9/ 9!---------------------------------------------------------------------- 9! namtrc_bc ! data for boundary conditions 9!----------------------------------------------------------------------- 9&namtrc_bc 9! 9 cn_dir = './' ! root directory for the location of the data files 9/