Changes between Version 24 and Version 25 of LMDZoGuOR


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Timestamp:
04/27/11 16:27:14 (13 years ago)
Author:
jgipsl
Comment:

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  • LMDZoGuOR

    v24 v25  
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    5 LMDZOR_v4 is the current version using LMDZ and ORCHIDEE. It is a configuration in phase with the coupled model IPSL-CM5. It can be used with LMDZ4 production version LMDZ4_AR5 or with one of the latest versions of LMDZ5/trunk.  
     5LMDZOR_v4 is the current version using LMDZ and ORCHIDEE. It is a configuration in phase with the coupled model IPSLCM5A. It can be used with LMDZ4 production version LMDZ4_AR5 or with one of the latest versions of LMDZ5/trunk.  
    66Before running this model set up, choose between 2 mode : Interannual AMIP simulation or climatologic simulation. No default setup exists. Modifications done by the user in the lmdz.card or orchidee.card are often necessary to adapt to a specific simulation. Modifications in lmdz.driver or orchidee.driver are less often necessary.  
    77---- 
    … …  
    1414}}} 
    1515 
    16 or for climtology AMIP : 
     16or for climatology AMIP : 
    1717{{{ 
    1818ln -s config.card_Climat config.card; cd COMP; ln -s lmdz.card_Climat lmdz.card 
    … …  
    2525 
    2626'''Step 1''' [[BR]] 
    27 Identify time series for the simulations you want and split them into yearly files. For the SST use the variable tsol_oce from LMDZ and for SIC use the variable pourc_sic. The variables should be at monthly time serie format. For exemple for the coupled IPSLCM5A rcp4.5 simulation, at CCRT use files : 
     27Identify time series for the simulations you want and split them into yearly files. For the SST use the variable tsol_oce from LMDZ and for SIC use the variable pourc_sic. The variables should be at monthly time series format. For example for the coupled IPSLCM5A rcp4.5 simulation, at CCRT use files : 
    2828{{{ 
    2929/dmnfs/cont003/p86denv/IGCM_OUT/IPSLCM5A/PROD/rcp45/v3.rcp45.1/ATM/Analyse/TS_MO/v3.rcp45.1_20060101_21251231_1M_tsol_oce.nc 
    … …  
    6161 
    6262= LMDZOR experience for running the gcm = 
    63 This configuration only contains only one directory for running the gcm.e : LMDZOR. This directory can be used for different type of simulation for exemple AMIP interannual or climatolical run. Or nudged run with regular or zoomed grid. Only the .card changes for different run. The PARAM directory and the .driver are the same. Two possibilities are predefined using the different .cards that are available. To do a climatological simulation, use cards with suffix ''_Climat'', do following link : 
     63This configuration only contains only one directory for running the gcm.e : LMDZOR. This directory can be used for different type of simulation for example AMIP interannual or climatological run. Or nudged run with regular or zoomed grid. Only the .card changes for different run. The PARAM directory and the .driver are the same. Two possibilities are predefined using the different .cards that are available. To do a climatological simulation, use cards with suffix ''_Climat'', do following link : 
    6464{{{ 
    6565cd LMDZOR/COMP; ln -s lmdz.card_Climat lmdz.card; ln -s orchidee.card_Climat orchidee.card 
    … …  
    7272The cards with suffix _Climat correspond to the experience LMDZOR in configuration LMDZ4OR_v3 and the cards with suffix _AMIP correspond to the experience in directory AMIP in LMDZ4OR_v3 configuration. 
    7373 
    74 Parametres in config.card such as !JobName, !CalendarType, !DateBegin, !DateEnd must always be considered and eventally modified according to desired experience. 
     74Parameters in config.card such as !JobName, !CalendarType, !DateBegin, !DateEnd must always be considered and eventually modified according to desired experience. 
    7575 
    7676---- 
    … …  
    8080 * If the executable create_etat0_limit or ce0l exits with following error message you need to update your LMDZ version to revision 1476 at branch LMDZ4_AR5 or higher : 
    8181'''''ERROR: 0032-184 MPI was not finalized  in routine unknown, task 0''''' 
    82  * Check memory in your job. For higher resolutions you may need to add threads just to have more memory. You must then compile in mpi mode (default for create_etat0_limit.e.para) and not mixt mpi_openmpi. In your job, add '''@ parallel_threads = 8'''. This gives you 8 times more memory per process mpi availible and you can multiply data_limit and stack_limit by 8. When adding threads you should remove '''@ resources = !ConsumableCpus(1)'''. For exemple for resolution 280x280x39 put in your job : 
     82 * Check memory in your job. For higher resolutions you may need to add threads just to have more memory. You must then compile in mpi mode (default for create_etat0_limit.e.para) and not mix mpi_openmpi. In your job, add '''@ parallel_threads = 8'''. This gives you 8 times more memory per process mpi available and you can multiply data_limit and stack_limit by 8. When adding threads you should remove '''@ resources = !ConsumableCpus(1)'''. For exemple for resolution 280x280x39 put in your job : 
    8383  
    8484{{{ 
    … …  
    9191}}} 
    9292 
    93  * You must desactivate the filtre fft if using branch LMDZ4_AR5 or earlier version of LMDZ. In run.def set '''use_filtre_fft = n'''. 
     93 * You must deactivate the filter fft if using branch LMDZ4_AR5 or earlier version of LMDZ. In run.def set '''use_filtre_fft = n'''. 
    9494 
    9595 * In config.card you must change to  
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    113113 
    1141141) Create file grilles_gcm.nc[[BR]] 
    115 LMDZ contains a program that creates a file netcdf containg the grid u and v. This program is located in file LMDZ5/libf/dyn3d/grilles_gcm_netcdf.F. Compile this program with the same resolution as the gcm. For exemple if using the LMDZOR_v4/Makefile, add in Makefile : 
     115LMDZ contains a program that creates a file netcdf containing the grid u and v. This program is located in file LMDZ5/libf/dyn3d/grilles_gcm_netcdf.F. Compile this program with the same resolution as the gcm. For example if using the LMDZOR_v4/Makefile, add in Makefile : 
    116116 
    117117{{{ 
    … …  
    139139 
    140140== Interpolation using a patch in libIGCM == 
    141 Interpolation is done in the CREATE job at the same time as execution of create_etat0_limit for creation of boudary files limit.nc. Using lmdz.card_Interannuel and config.card_Interannuel is necessary to interpolate over several years. libIGCM tag v1_10 is requierd. [[BR]] 
     141Interpolation is done in the CREATE job at the same time as execution of create_etat0_limit for creation of boundary files limit.nc. Using lmdz.card_Interannuel and config.card_Interannuel is necessary to interpolate over several years. libIGCM tag v1_10 is requierd. [[BR]] 
    142142 
    143143To activate the patch modifications in CREATE/COMP/lmdz.card_Interannuel is needed. Add the files to interpolate in [!BoundaryFiles]/List and in [!OutputFiles]/List and add the paragraf [Nudge_Interp] in the end of lmdz.card. Here below is an exemple how to add u. In the same lmdz.card it is possible to add different files u,v,t,... using the same syntax :