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Working at IDRIS

}}} ---- [[PageOutline(1-3,Index du chapitre,,numbered)]] # IDRIS users' manual # See: http://www.idris.fr/ # IDRIS's machines and file systems # [[Image(wiki:DocBenv:IDRIS.jpg, 360px)]] # How to install your environment at IDRIS # * Find more information about IDRIS on http://www.idris.fr/ * [http://www.idris.fr/ada/ Scripts environment at IDRIS] * The Ada machine at IDRIS can be used for our configurations. '''It supports the model execution and post processing.''' * Note: the software [http://www.idris.fr/su/Frontale/ulam/tina_4.2.html the Tina software installed at IDRIS] gives access to hourly, daily and weekly backups of your $HOME files. [[NoteBox(note,It is important to take the time to install a comfortable and efficient environment.)]] * We recommend to follow the example of the rpsl035 login's environment which is in bash. See the ~rpsl035/.bash_login file {{{ ryyy999@ada: cat ~/.bash_login #------------------------------------------------------ # PLATFORM ENVIRONMENT #------------------------------------------------------ source ~rpsl035/.bash_login }}} * Enter here the path of the compiling tools fcm and the rebuild tool used to reconstruct files from a parallel model: {{{ export PATH=/smphome/rech/psl/rpsl035/FCM/bin:$PATH }}} * Load here the modules giving access to libraries and post processing tools needed on our Home. {{{ module load netcdf module load ferret/6.72 module load nco module load cdo }}} * Avoid messages displayed when connecting on Ada and Gaya. Make sure that the command rsh gaya pwd returns a unique line with the HOME on Ada. Make sure the copy of a file using rcp works properly in the two directions. {{{ ryyy999@ada: rsh gaya pwd /cache2/ryyy999 ryyy999@ada: date > a ; rcp a gaya: }}} * Transfers !Ada/Gaya must be done with mfget/mfput. * For dods access, use the command mfdods on Gaya. This creates the link (24h after the first time) visible here: http://dods.idris.fr {{{ # Export a file: ryyy999@gaya: mfdods mon_fichier -d /cache[n]/DODS/pub/rlab001/rep_1 # Once the access activated, you must do the following to destroy a file: ryyy999@ada: mfdods -r /cache[n]/DODS/pub/rlab001/rep_1/mon_fichier }}} * To give access to the WORKDIR of Ada to all (755 or drwxr-xr-x), you must contact the IDRIS' assistance for the level /workgpfs/rech/grp. ## System requirements ## To know the computing time used by your group (updated once a day): {{{ rces452@ada338:~> cpt }}} # Things to know about file systems # ## WORKDIR ## * The $WORKDIR Ada is large but it is not saved. * The $WORKDIR Ada can be extended (20 To for the group for example). The project investigator can ask an extension on the IDRIS's extranet. See: http://www.idris.fr/extranet/index.html. ## Quotas ## To check the used space and the size of the HOME, WORKDIR and GAYA: {{{ # Quota HOME ryyy999@ada: quota_u # Quota WORKDIR ryyy999@ada: quota_u -w # Quota GAYA ryyy999@gaya: quota_u }}} # End-of-job messages # To receive the end-of-job messages sent by the job itself (e.g. end of simulation, errors,...) you must specify your address in the $HOME/.forward file. # Simulation outputs # Simulation outputs are stored on Gaya:IGCM_OUT. The IDRIS's dods server is accessible from: http://www.idris.fr # The IDRIS's machines # * [wiki:DocBenvAidrisAada Ada] * [wiki:DocBenvAidrisAada#adapp Adapp]