}}}
----
[[PageOutline(1-2,Table of contents)]]
= IPSLCM6-AER ^([#hn To do list for Anne and Ramiro before launch CMIP6 simulations ])^ =
== 1. Which simulations ? ==
||=Simulation Name =||=Tier=||= Domains =||=Duration =||=Properties =||= Info =||= LINK =||
|| piClim-control || 1 || Atm+Aer || 30 years ||Fixed SST ERF || PI sst, ice climatology, PI aer || [[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=16abe6d4-49d2-4948-be53-a1362579e31b&version=1|Official Description]] ||
|| piClim-aer || 2 || Atm+Aer || 30 years ||Fixed SST ERF || PI sst, ice climatology, PD aer || [[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=bfe14f6a-e016-47b4-9c90-a4ec7c337612&version=1|Official Description]] ||
== 2. Ping files ==
{{{#!th rowspan=10 align=justify
INFO
}}}
|----------------
{{{#!td
* send email to Arnaud (2020/04/30)
* Arnaud answer
{{{
Hi Anne and Ramiro,
I have generated xmls files for piClim-control experiment (30 years from 1850 to 1879) because they are different from piControl experiment.
Could you test them on 1year simulation (before launching 30 years) ? Let me know if it is ok for you. Once you will have confirmed it is ok,
I will generate xmls files for other experiments.
Cheers,
Arnaud
}}}
>> Ramiro (It has been run a test for 1 year for pi-control-AER (with ocean coupled) and the piClim-Control with forced ocean SST and ICE).
}}}
|----------------
{{{#!td
Path is : IGCM/CMIP6/IPSLCM6.1.11-LR/IPSL-CM6A-LR-INCA/piClim-control
[[BR]]
* 2020/05/01 There is a new experiment directory [https://forge.ipsl.jussieu.fr/igcmg/changeset/5074/ EXPERIMENTS/LMDZORINCA/piClim-control_CMIP6/] with ping files
* 2020/05/01 commit because I forget the inca ping file (!!!) see rev [https://forge.ipsl.jussieu.fr/igcmg/changeset/5075/CONFIG here]
* 2020/05/01 commit for an error on dr2xml inca file [https://forge.ipsl.jussieu.fr/igcmg/changeset/5076/CONFIG here]
[[BR]]
Simulation bug with this error
{{{
A grid must be defined for field 'CMIP6_rlutcsaf'
}}}
--> to do : understand this problem and correct it. (on next monday)
[[BR]] 20200504 : correction done, the lmdz ping files was not the good one. New revision [https://forge.ipsl.jussieu.fr/igcmg/changeset/5077/ 5077]. Now the simulation run for 1 day, I will test a longer run (1 year) to check post-treatment
}}}
== 3. Input files for forced model ==
{{{#!th rowspan=10 style="background: #eef"
SST/ICE
}}}
|----------------
{{{#!td
{{{
Il me semble que pour être cohérent avec la non-réalisation d'un DECK, il doit prendre les SST du piControl officiel.
Que dit le protocole pour ces simulations à SST fixées ? SST observées ou SST du piControl ?
}}}
translation
{{{
to be coherent with the fact we not rerun a deck, we need to use SST from the offical picontrol simulation.
Before to made this choice we need to check the protocol for fixed sst ? observed or picontrol sst ?
}}}
[[BR]]
Ramiro::
{{{ TODO: verify protocol to know if we use sst from obsevation or from picontrol run}}}
> - The protocol indicates that: Fixed SST ERF simulation. Use pre-industrial climatological average SST and sea-ice distributions.
> - The official paper describing AerChemMIP indicates:
> The control simulation for these experiments will use 1850concentrations of WMGHGs and emissions of NTCFs,
> run for 30 years in atmosphere-only mode with SSTs and sea ice prescribed as a (monthly varying) climatology
> taken from 30 years of the pre-industrial control (experiment piClim-control; see Table 6) following the
> Radiative Forcing Model Intercomparison Project (RFMIP) specification (Pincus et al., 2016).
'''We have then to use the piClim-control'''
Anne::
{{{ TODO: ask Arnaud path for the official ipslcm6 picontrol simulation. --> path send by email 20200504}}}
2020504 : Arnaud::
> J'ai fait les xmls pour 30 ans de 1850 à 1879 mais vous pouvez prendre une autre periode de 30 ans que celle-là
> si vous le souhaitez...à la fois par rapport au protocole demandé mais peut etre aussi par rapport à la periode
> de 30 ans du picontrol de laquelle vous voulez extraire les sst de forcage (peut etre que certains 30 ans sont "mieux" que d'autres"...)...
> Translation :
> I did xmls files for 30 years from 1850 to 1879, but you can use an other 30 years periods than this one if the
> protocol ask it, or if you prefer an other period from the picontrol simulation
}}}
{{{#!th rowspan=10 style="background: #eaf"
LIMIT.nc
}}}
|----------------
{{{#!td
We will run a leap simulation, with 365 and 366 years. To switch between one limit file to another we use !SmoothFile part
{{{
# For leap years, copy ELC-144x142x79-leap_clim_limit.nc over ELC-144x142x79_clim_limit.nc file
# As ELC-144x142x79-leap_clim_limit.nc is also copied at each (re)submission, for 1850-1851 copy again ELC-144x142x79_clim_limit.nc
# Copy ELC-144x142x79_clim_limit.nc again for year 1900, which is Not bissextile (it does not divide by 400)
# Submit Job with PeriodNb=2 to reach 1852, the first bissextile year ; than change PeriodNb=16 (multiple of 4) for next resubmissions
[SmoothFiles]
List= (${R_IN}/ATM/LIMIT/CMIP6/CM61-LR-pi-03/interpol/ELC-144x142x79-leap_clim_limit.nc, limit.nc, 3:4:)
# (${R_IN}/ATM/LIMIT/CMIP6/CM61-LR-pi-03/interpol/ELC-144x142x79_clim_limit.nc, limit.nc, 1:1:2),\
# (${R_IN}/ATM/LIMIT/CMIP6/CM61-LR-pi-03/interpol/ELC-144x142x79_clim_limit.nc, limit.nc, 51:1:51),\
# (${R_IN}/ATM/LIMIT/CMIP6/CM61-LR-pi-03/interpol/ELC-144x142x79_clim_limit.nc, limit.nc, 161:1:162)
}}}
See section 2.2.4 [https://forge.ipsl.jussieu.fr/igcmg_doc/wiki/Doc/Setup#COMPdirectory here]
* 20200505 : Anne launch a simulation to test it.
}}}
{{{#!th rowspan=10 style="background: #eff"
AER pi/pd
}}}
|----------------
{{{#!td
pi / pd::
Ramiro {{{ do you have files for these two inputs files ?}}}
> The links I have added to the table indicates the input needed by each simulation.
> piClim-control and piClim-aer.
> For piClim-control we need 1850 forcings, for piClim-aer the forcings are the same but aerosols emissions
> and their precursors should be for 2014. Below it is explained in detail.
}}}
== 4. Experiment directory ==
Add a new experiment directory for forced model : [https://forge.ipsl.jussieu.fr/igcmg/changeset/5069/CONFIG/UNIFORM/v6/IPSLCM6 first commit]
=== 4.1 Questions to solve ===
* which !ModelName in config.card ?
* which !TagName in config.card ?
--> the answer to the [wiki:incadev/IPSLCM6-AER#a2.Pingfiles ping files] give some clues. We need to take same parameter than for coupled model
[[BR]]
2020/05/01 : make modification in experiment directory and change name of this directory to be coherent with the type of experiment : piclim-control instead of picontrol
[https://forge.ipsl.jussieu.fr/igcmg/changeset/5072/CONFIG see here]
{{{#!div style="background: #ffd; border: 3px ridge"
IMPORTANT::
Do we have to follow any rule for !ModelName and !TagName in the config.card ?? --> YES it's depends of CMIP6 protocole and xml files path
}}}
== 5. Before launch a simulation ==
- official ipsl check https://forge.ipsl.jussieu.fr/igcmg/wiki/IPSLCM6/IPSL-CM6A-LR#Checklist
- add od550 variables in lmdz output : modify the output level for od550 variables in file modeles/LMDZ/DefLists/file_def_histmth_lmdz.xml
{{{
-
-
-
-
-
-
-
-
-
-
-
-
-
+
+
+
+
+
+
+
+
+
+
+
+
+
}}}
== 6. History ==
||=Date =||= Person =||= Action =||= Changes =||= Topic =||
|| 2020/04/30 || Anne ||Feedback email about ping files || || ping files ||
|| 2020/05/01 || Ramiro ||Test of 1 year config. coupled || || ||
|| 2020/05/01 || Anne ||New experiment directory ||Added LMDZORINCA || EXPERIMENT ||
|| 2020/05/01 || Anne ||Solved inca ping file issue || || ping files ||
|| 2020/05/01 || Anne ||Added inca dr2xml || || ping files ||
|| 2020/05/01 || Anne ||Investigated about config.card || || config.card ||
|| 2020/05/01 || Ramiro ||Check protocol about SST-PI ||We have use picontrol (>=30yr) || ping files ||
|| 2020/05/03 || Ramiro ||Update wiki with official links || || documentation ||
|| 2020/05/04 || Anne ||Solved issue CMIP6_rlutcsaf || || ping files ||
|| 2020/05/04 || Arnaud ||Email about xml files 1850-1879 ||Possible to extend them || ping files ||
|| 2020/05/04 || Ramiro ||1850-1879 fits the requirements ||No extend needed || ping files ||
|| 2020/05/05 || Ramiro ||Added all needed forcing files ||Added to wiki || documentation ||
|| 2020/05/05 || Ramiro ||Checked limit.nc from piContorl ||It is compatible with AerChem || limit.nc ||
|| 2020/05/05 || Ramiro ||Change at dustsource.f90 ||Added scaling factor file || x2DUST exp ||
|| 2020/05/05 || Ramiro ||Prepated 4 experiments of piClim||control, aer, 2xDUST, 2xS || RUNS ||
|| 2020/05/05 || Ramiro ||Added table with document piClim||control, aer, 2xDUST, 2xS || DOCUMENTATION ||
|| 2020/05/05 || Anne ||Solved issue with leap years ||New scheme in lmdz.card || limit.nc Calendar ||
|| 2020/05/05 || Anne ||Simulation to test patch || || limit.nc Calendar ||
|| 2020/05/05 || Ramiro ||Run tests 4 experiments piClim ||control, aer, 2xDUST, 2xS || RUNNING-TEST ||
|| 2020/05/07 || Anne ||Checked LMDZ def_histmth_lmdz ||file_def_histmth_lmdz || XML files LMDZ ||
|| 2020/05/07 || Ramiro ||Added file_def_histmth_lmdz.xml ||20200507 Anne and others more || XML files LMDZ ||
|| 2020/05/07 || Ramiro ||Recompiled to have AMD-ROME || || IRENE ||
|| 2020/05/07 || Ramiro ||Tested 2xDUST and 2xSS emissions||Approx factor 2x || RUNNING-TEST ||
|| 2020/05/07 || Ramiro ||Run 4 experiments piClim ||control, aer, 2xDUST, 2xS || RUNNING ||
|| 2020/05/11 || Ramiro ||STOP 4 experiments piClim ||control, aer, 2xDUST, 2xS || STOPPED ||
|| 2020/05/13 || Anne ||Commit new code for DUST EXp || 2xDUST || SVN [925] [https://forge.ipsl.jussieu.fr/igcmg/changeset/5093/CONFIG/UNIFORM [5093]] ||
----
== 7a. IPSLCM6-AER piClim-AER and piClim-control ==
Here it is indicated the final setting derived from the previous steps.
{{{#!th rowspan=12 align=justify style="background: #eef"
piClim-control
}}}
|----------------
{{{#!td
||=LMDZ file =||= Source =||= Simulation =||= Changes =||= Info =||= LINK =||
|| limit.nc || ELC-144x142x79_clim_limit.nc || CM61-LR-pi-03 || None || Previous Ramiro version 30yr discarded. || [[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=16abe6d4-49d2-4948-be53-a1362579e31b&version=1|Official Description]] ||
|| solarforcing.nc || solarforcing_v3.1_piControl_ave_6bands_366days.nc || SOLAR-CMIP6-v3.1corr || None || piControl || ||
|| taulwstrat.2D.nc || taulwstrat.2D.ave.nc || STRATAERO-CMIP6-v3 || None || pi? || ||
|| tauwwstrat.2D.nc || tauswstrat.2D.ave.nc || STRATAERO-CMIP6-v3 || None || pi? || ||
|| climoz_LMDZ.nc || climoz_LMDZ_1850_1850_clim.nc || historical.v20160711.v2 || None || UoR || ||
|| cfsites_grid.nc || cfsites_grid_CMIP6.nc || SITES || None || pi? || ||
|| startphy.nc || CM61-pre-pi-01_18491231_restartphy.nc || IPSLCM6 || None || || ||
|| start.nc || CM61-pre-pi-01_18491231_restart.nc || IPSLCM6 || None || || ||
----
||=INCA file =||= Source =||= Version =||= Changes =||= Info =||= LINK =||
|| sflx_ANT.nc || sflx_lmdz_ANT_1850_phy.nc || IPCC-AR6-SFLX-VERS2 || None || || ||
|| sflx_BBG.nc || sflx_lmdz_BBG_1850_phy.nc || IPCC-AR6-SFLX-VERS2 || None || || ||
|| aircraft_mth.nc || aircraft_1850_phy.nc || IPCC-AR6-AIRCRAFT || None || || ||
|| oxydants.nc || oxydants_1850.nc || IPCC-AR6-OXYDANTS || None || || ||
|| sflx_GHG.nc || sflx_lmdz_GHG.nc || IPCC-AR6-SFLX-VERS2 || None || || ||
|| sflx_MISC.nc || sflx_lmdz_MISC.nc || IPCC-AR6-SFLX-VERS2 || None || || ||
|| sflx_NAT.nc || sflx_lmdz_NAT.nc || IPCC-AR6-SFLX-VERS2 || None || || ||
|| rhvEC.txt || rhvEC_v2.txt || || None || || ||
|| wthEC.txt || wthEC_v2.txt || || None || || ||
|| clyEC.txt || clyEC_v2.txt || || None || || ||
|| wth.dat || wth_v2.dat || || None || || ||
|| cly.dat || cly_v2.dat || || None || || ||
|| rhv.dat || rhv_v2.dat || || None || || ||
|| landuse.nc || landuse.nc || || None || || ||
|| phototable.dat || new_phototable.dat || || None || || ||
|| fq_antro.dat || scale_uniform_fact1.dat || || None || || ||
IMPORTANT::
- I have added the changes on the code to use the fq_antro.dat which is just a file to rescale the dust emission per grid cell. In principle only two files are needed one named scale_uniform_fact1.dat for all experiments. Other with scale_uniform_fact2.dat for the experiment 2xDUST.
- Note also that piClim-Control should have 1850 CO2, CH4, N2O and O3.
}}}
Note : The code was commited on rev [925] . We add a flag '''fq_flag''' to modify or not the dust emission frequency. This flag is manage from inca.card (see igcmg rev [https://forge.ipsl.jussieu.fr/igcmg/changeset/5093/CONFIG/UNIFORM 5093]) and will modify value in file inca.def read by INCA model. When this flag is activate, INCA model will read file fq_antro.dat.
{{{#!th rowspan=12 align=justify style="background: #eea"
piClim-aer
}}}
|----------------
{{{#!td
DIFFERENCE with piClim-control
||=INCA file =||= Source =||= Version =||= Changes =||= Info =||= LINK =||
|| sflx_ANT.nc || sflx_lmdz_ANT_2014_phy.nc || IPCC-AR6-SFLX-VERS2 || None || || ||
|| sflx_BBG.nc || sflx_lmdz_BBG_2014_phy.nc || IPCC-AR6-SFLX-VERS2 || None || || ||
|| aircraft_mth.nc || aircraft_2014_phy.nc || IPCC-AR6-AIRCRAFT || None || || ||
|| oxydants.nc || oxydants_2014.nc || IPCC-AR6-OXYDANTS || None || || ||
COMMON with piClim-control
||=INCA file =||= Source =||= Version =||= Changes =||= Info =||= LINK =||
|| sflx_GHG.nc || sflx_lmdz_GHG.nc || IPCC-AR6-SFLX-VERS2 || None || || ||
|| sflx_MISC.nc || sflx_lmdz_MISC.nc || IPCC-AR6-SFLX-VERS2 || None || || ||
|| sflx_NAT.nc || sflx_lmdz_NAT.nc || IPCC-AR6-SFLX-VERS2 || None || || ||
IMPORTANT::
- By exploring the files oxydants and aircarft they may contain aerosol precursors (used or not by the AER part) so
I have indicated them to be from 2014 according to description of experiment.
- Note also that piClim-aer is regarding GHG like piClim-Control so: 1850 CO2, CH4, N2O and O3.
}}}
----
== 7. IPSLCM6-AER (Set of simulations) ==
Full set of simulations to be run
||= Name =||= Sim-Name =||=Tier=||= Min. Config =||= Period =||= Kind =||= Notes =||= Link =||
|| piClim-control ||LOI61-LR-AER-piclim-Control-v1 || 1 || Atm+Aer || 30 years ||Fixed SST ERF || PI sst, ice climatology, PI aer || [[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=16abe6d4-49d2-4948-be53-a1362579e31b&version=1|Official Description]] ||
|| piClim-aer ||LOI61-LR-AER-piclim-AER-v1 || 2 || Atm+Aer || 30 years ||Fixed SST ERF || PI sst, ice climatology, PD aer || [[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=bfe14f6a-e016-47b4-9c90-a4ec7c337612&version=1|Official Description]] || =||
||= Name =||= Sim-Name =||=Tier=||= Min. Config =||= Period =||= Kind =||= Notes =||= Link =||
|| piClim-2xDust ||LOI61-LR-AER-piclim-2xDUST-v1 || 2 || Atm+Aer || 30 years ||Fixed SST ERF || PI-sst, PI forcing, 2x dust emission ||[[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=e30efbfb-c593-45c5-93ce-aee32e15dc78&version=1|Official Description]] ||
|| piClim-2xSS ||LOI61-LR-AER-piclim-2xSS-v1 || 2 || Atm+Aer || 30 years ||Fixed SST ERF || PI-sst, PI forcing, 2x ss emission ||[[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=94ba6329-d08b-4170-82a7-405126aaae01&version=1|Official Description]] ||
||= Name =||= Sim-Name =||=Tier=||= Min. Config =||= Period =||= Kind =||= Notes =||= Link =||
|| piClim-2xDMS || || 3 || Atm+Aer || 30 years ||Fixed SST ERF || PI-sst, PI forcing, 2x DMS emission || [[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=f322cac8-d990-458a-9d50-9713feac4366&version=1|Official Description]] ||
|| piClim-BC || || 2 || Atm+Aer || 30 years ||Fixed SST ERF || PI-sst, PI forcing, 2014 BC emission || [[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=a655f42b-b8e9-41bc-bf21-da454a1969be&version=1|Official Description]]||
|| piClim-NTCF || || 1 || Atm+Aer || 30 years ||Fixed SST ERF || PI-sst, PI forcing, 2014 NTCF emission || [[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=6594e679-b6ba-4cb6-a0b9-eaa4c17fdab8&version=1|Official Description]] ||
|| piClim-SO2 || || 3 || Atm+Aer || 30 years ||Fixed SST ERF || PI-sst, PI forcing, 2014 SO2 emission || [[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=a8618c78-e5e2-44db-90fe-e28f6426e1d5&version=1|Official Description]]||
|| piClim-OC || || 3 || Atm+Aer || 30 years ||Fixed SST ERF || PI-sst, PI forcing, 2014 OC emission || [[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=1718c7a7-ee54-4193-b706-ff45128d4936&version=1|Official Description]] ||
|| piClim-NOx || || 3 || Atm+Aer || 30 years ||Fixed SST ERF || PI-sst, PI forcing, 2014 NOx emission || [[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=a8c66e82-edb5-41ae-9f9e-0de42795fd1b&version=1|Official Description]] ||
|| piClim-NH3 || || 3 || Atm+Aer || 30 years ||Fixed SST ERF || PI-sst, PI forcing, 2014 NH3 emission || [[https://view.es-doc.org/index.html?renderMethod=id&project=cmip6&id=a8c66e82-edb5-41ae-9f9e-0de42795fd1b&version=1|Official Description]] ||
|||| All this set of simulations needs a change in the code, in the forcings, or at specific parameters of INCA ||||
=== Description of each simulation ===
COLOR CODES::
{{{#!th rowspan=12 align=justify style="background: #eea"
Prepared files but not yet full run
}}}
|----------------
{{{#!td rowspan=12 align=justify style="background: #eba"
Not yet prepared
}}}
|----------------
{{{#!td rowspan=12 align=justify style="background: #eef"
Prepared and run
}}}
INFO::
{{{#!th rowspan=12 align=justify style="background: #eea"
piClim-2xDUST
}}}
|----------------
{{{#!td
DIFFERENCE with piClim-control
||=INCA file =||= Source =||= Version =||= Changes =||= Info =||= LINK =||
|| fq_antro.dat || scale_uniform_fact2.dat || || None || Used for 2xDUST || ||
The simulation is identical to piClim-Control but with doubled emissions of DUST at 1850.
}}}
{{{#!th rowspan=12 align=justify style="background: #eea"
piClim-2xSS
}}}
|----------------
{{{#!td
DIFFERENCE with piClim-control
- The simulation is identical to piClim-Control but with doubled emissions of SeaSalt at 1850.
- I have double checked the ss_corr factor in INCA code. It seems to be a global factor to flux emissions so I have double the value from piClim-control: form 1.15 to 2.30
}}}
{{{#!th rowspan=12 align=justify style="background: #eba"
piClim-OC
}}}
|----------------
{{{#!td
DIFFERENCE with piClim-control
- The simulation is identical to piClim-Control but Organic Carbon of 2014.
- This part will need changes on the surface fluxes but not like AER that changes all, but just those specific of OC.
}}}
{{{#!th rowspan=12 align=justify style="background: #eba"
piClim-BC
}}}
|----------------
{{{#!td
DIFFERENCE with piClim-control
- The simulation is identical to piClim-Control but Black Carbon of 2014.
- This part will need changes on the surface fluxes but not like AER that changes all, but just those specific of BC.
}}}
{{{#!th rowspan=12 align=justify style="background: #eba"
piClim-NH3
}}}
|----------------
{{{#!td
DIFFERENCE with piClim-control
- The simulation is identical to piClim-Control but NH3 of 2014.
- This part will need changes on the surface fluxes but not like AER that changes all, but just those specific of NH3.
}}}
{{{#!th rowspan=12 align=justify style="background: #eba"
piClim-NOx
}}}
|----------------
{{{#!td
DIFFERENCE with piClim-control
- The simulation is identical to piClim-Control but NOx of 2014.
- This part will need changes on the surface fluxes but not like AER that changes all, but just those specific of NOx.
}}}
{{{#!th rowspan=12 align=justify style="background: #eba"
piClim-SO2
}}}
|----------------
{{{#!td
DIFFERENCE with piClim-control
- The simulation is identical to piClim-Control but SO2 of 2014.
- This part will need changes on the surface fluxes but not like AER that changes all, but just those specific of SO2.
}}}
{{{#!th rowspan=12 align=justify style="background: #eba"
piClim-NTCF
}}}
|----------------
{{{#!td
DIFFERENCE with piClim-control
We need to discuss implementation with Yves and Didier.
}}}