Ticket #85: last_run_stderr

File last_run_stderr, 5.4 KB (added by ssenesi, 5 years ago)
Line 
1
2Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
3
4Backtrace for this error:
5#0  0x2B1571DB67D7
6#1  0x2B1571DB6DDE
7#2  0x2B15759309EF
8#3  0x385D78E in sphereRemap::squaredist(sphereRemap::Coord const&, sphereRemap::Coord const&) at triple.hpp:80
9#4  0x3879291 in sphereRemap::compareDist(sphereRemap::Node*, sphereRemap::Node*) at node.cpp:75
10#5  0x387C7AB in void std::__insertion_sort<__gnu_cxx::__normal_iterator<sphereRemap::Node**, std::vector<sphereRemap::Node*, std::allocator<sphereRemap::Node*> > >, int (*)(sphereRemap::Node*, sphereRemap::Node*)>(__gnu_cxx::__normal_iterator<sphereRemap::Node**, std::vector<sphereRemap::Node*, std::allocator<sphereRemap::Node*> > >, __gnu_cxx::__normal_iterator<sphereRemap::Node**, std::vector<sphereRemap::Node*, std::allocator<sphereRemap::Node*> > >, int (*)(sphereRemap::Node*, sphereRemap::Node*)) at stl_algo.h:2159
11#6  0x387C252 in void std::__final_insertion_sort<__gnu_cxx::__normal_iterator<sphereRemap::Node**, std::vector<sphereRemap::Node*, std::allocator<sphereRemap::Node*> > >, int (*)(sphereRemap::Node*, sphereRemap::Node*)>(__gnu_cxx::__normal_iterator<sphereRemap::Node**, std::vector<sphereRemap::Node*, std::allocator<sphereRemap::Node*> > >, __gnu_cxx::__normal_iterator<sphereRemap::Node**, std::vector<sphereRemap::Node*, std::allocator<sphereRemap::Node*> > >, int (*)(sphereRemap::Node*, sphereRemap::Node*)) at stl_algo.h:2231
12#7  0x387BAB0 in void std::sort<__gnu_cxx::__normal_iterator<sphereRemap::Node**, std::vector<sphereRemap::Node*, std::allocator<sphereRemap::Node*> > >, int (*)(sphereRemap::Node*, sphereRemap::Node*)>(__gnu_cxx::__normal_iterator<sphereRemap::Node**, std::vector<sphereRemap::Node*, std::allocator<sphereRemap::Node*> > >, __gnu_cxx::__normal_iterator<sphereRemap::Node**, std::vector<sphereRemap::Node*, std::allocator<sphereRemap::Node*> > >, int (*)(sphereRemap::Node*, sphereRemap::Node*)) at stl_algo.h:5491
13#8  0x387AA59 in sphereRemap::split(sphereRemap::Node*) at node.cpp:453 (discriminator 1)
14#9  0x3879F65 in sphereRemap::insert(sphereRemap::Node*, sphereRemap::Node*) at node.cpp:269 (discriminator 1)
15#10  0x388E7BE in sphereRemap::CBasicTree::insertNode(sphereRemap::Node*) at tree.cpp:90
16#11  0x388EBBB in sphereRemap::CTree::insertNodes(std::vector<sphereRemap::Node, std::allocator<sphereRemap::Node> >&) at tree.cpp:168
17#12  0x388E42C in sphereRemap::CBasicTree::build(std::vector<sphereRemap::Node, std::allocator<sphereRemap::Node> >&) at tree.cpp:44
18#13  0x3880412 in sphereRemap::CParallelTree::buildLocalTree(std::vector<sphereRemap::Node, std::allocator<sphereRemap::Node> > const&, std::vector<int, std::allocator<int> > const&) at parallel_tree.cpp:275
19#14  0x3880E94 in sphereRemap::CParallelTree::build(std::vector<sphereRemap::Node, std::allocator<sphereRemap::Node> >&, std::vector<sphereRemap::Node, std::allocator<sphereRemap::Node> >&) at parallel_tree.cpp:344 (discriminator 3)
20#15  0x385E134 in sphereRemap::Mapper::buildSSTree(std::vector<sphereRemap::Node, std::allocator<sphereRemap::Node> >&, std::vector<sphereRemap::Node, std::allocator<sphereRemap::Node> >&) at mapper.hpp:31
21#16  0x3857990 in sphereRemap::Mapper::computeWeights(int) at mapper.cpp:118
22#17  0x383F7B5 in xios::CDomainAlgorithmInterpolate::computeRemap() at domain_algorithm_interpolate.cpp:233
23#18  0x3840E48 in xios::CDomainAlgorithmInterpolate::computeIndexSourceMapping_(std::vector<xios::CArray<double, 1>*, std::allocator<xios::CArray<double, 1>*> > const&) at domain_algorithm_interpolate.cpp:358
24#19  0x384B509 in xios::CGenericAlgorithmTransformation::computeIndexSourceMapping(std::vector<xios::CArray<double, 1>*, std::allocator<xios::CArray<double, 1>*> > const&) at generic_algorithm_transformation.cpp:97
25#20  0x3688C8E in xios::CGridTransformation::computeAll(std::vector<xios::CArray<double, 1>*, std::allocator<xios::CArray<double, 1>*> > const&, long long) at grid_transformation.cpp:396
26#21  0x3674A04 in xios::CGrid::transformGrid(xios::CGrid*) at grid.cpp:1400 (discriminator 1)
27#22  0x36252A0 in xios::CField::solveTransformedGrid() at field.cpp:980
28#23  0x3621A7B in xios::CField::solveAllReferenceEnabledField(bool) at field.cpp:641
29#24  0x3621A25 in xios::CField::solveAllReferenceEnabledField(bool) at field.cpp:629 (discriminator 1)
30#25  0x3643F95 in xios::CFile::solveAllRefOfEnabledFields(bool) at file.cpp:681 (discriminator 2)
31#26  0x35CB09A in xios::CContext::solveAllRefOfEnabledFields(bool) at context.cpp:474 (discriminator 2)
32#27  0x35CC88D in xios::CContext::postProcessing() at context.cpp:825
33#28  0x35CACA1 in xios::CContext::closeDefinition() at context.cpp:386
34#29  0x3706133 in cxios_context_close_definition at icdata.cpp:102 (discriminator 3)
35#30  0x34A86E0 in __idata_MOD_xios_close_context_definition at idata.f90:250
36#31  0x1C07EFC in aro_surf_diag_ at aro_surf_diag.F90:351
37#32  0xF2A9DC in aro_surf_diagh_ at aro_surf_diagh.F90:138
38#33  0xDBEA04 in iopack_ at iopack.F90:229
39#34  0xD64261 in stepo_ at stepo.F90:232
40#35  0x1BF1CE6 in cnt4_ at cnt4.F90:1017
41#36  0xF2F241 in cnt3_ at cnt3.F90:302
42#37  0xF30691 in cnt2_ at cnt2.F90:73
43#38  0xD75291 in cnt1_ at cnt1.F90:113
44#39  0xB7542A in cnt0_ at cnt0.F90:169
45#40  0xB74F20 in master at master.F90:76
46#41  0x2B157591DC84
47--------------------------------------------------------------------------
48mpiexec noticed that process rank 1 with PID 29746 on node lxaster7 exited on signal 11 (Segmentation fault).
49--------------------------------------------------------------------------