[1134] | 1 | #ifndef EP_TYPE_HPP_INCLUDED |
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| 2 | #define EP_TYPE_HPP_INCLUDED |
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| 3 | |
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| 4 | |
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| 5 | #include <iostream> |
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| 6 | #include <stdlib.h> |
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| 7 | #include <stdio.h> |
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| 8 | #include <list> |
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| 9 | #include <map> |
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| 10 | #include <omp.h> |
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| 11 | #include <vector> |
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| 12 | #include <numeric> |
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| 13 | #include <bitset> |
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| 14 | //#include <memory.h> |
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| 15 | #include <algorithm> |
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| 16 | #include <assert.h> |
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| 17 | #include <math.h> |
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| 18 | |
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| 19 | #ifdef _Debug |
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| 20 | #define Debug(x) std::cout << x << std::endl |
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| 21 | #else |
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| 22 | #define Debug(x) |
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| 23 | #endif |
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| 24 | |
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| 25 | #define BUFFER_SIZE 10000 |
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| 26 | |
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| 27 | typedef std::pair< int, int > SIZE_RANK_INFO; // < rank, size> |
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| 28 | |
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| 29 | typedef std::vector< std::pair<int, int> > RANK_MAP; // at(ep_rank) = <ep_rank_local, mpi_rank> |
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| 30 | |
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| 31 | typedef std::vector<std::pair< std::pair<int, int>, std::pair<int, int> > > INTERCOMM_RANK_MAP; |
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| 32 | |
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| 33 | |
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| 34 | typedef struct |
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| 35 | { |
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| 36 | int first; |
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| 37 | int second; |
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| 38 | int third; |
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| 39 | } Triple_int; |
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| 40 | |
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| 41 | namespace ep_lib |
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| 42 | { |
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| 43 | //#define EP_UNDEFINED -32766 |
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| 44 | |
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| 45 | class ep_communicator; |
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| 46 | class ep_intercomm; |
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| 47 | class OMPbarrier; |
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| 48 | typedef ep_communicator* EP_Comm; |
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| 49 | class MPI_Comm; |
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| 50 | |
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| 51 | |
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| 52 | class MPI_Status |
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| 53 | { |
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| 54 | public: |
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| 55 | |
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| 56 | #ifdef _intelmpi |
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| 57 | int ep_datatype; |
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| 58 | #elif _openmpi |
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| 59 | void * ep_datatype; |
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| 60 | #endif |
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| 61 | |
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| 62 | int ep_src; |
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| 63 | int ep_tag; |
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| 64 | |
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| 65 | |
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| 66 | void* mpi_status; |
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| 67 | }; |
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| 68 | |
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| 69 | class MPI_Message |
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| 70 | { |
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| 71 | public: |
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| 72 | |
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| 73 | #ifdef _intelmpi |
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| 74 | int mpi_message; |
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| 75 | #elif _openmpi |
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| 76 | void * mpi_message; |
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| 77 | #endif |
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| 78 | |
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| 79 | int ep_src; |
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| 80 | int ep_tag; |
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| 81 | |
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| 82 | void* mpi_status; |
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| 83 | |
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| 84 | MPI_Message() {} |
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| 85 | |
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| 86 | #ifdef _intelmpi |
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| 87 | MPI_Message(int message): mpi_message(message) {} |
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| 88 | #elif _openmpi |
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| 89 | MPI_Message(void* message): mpi_message(message) {} |
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| 90 | #endif |
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| 91 | }; |
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| 92 | |
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| 93 | typedef std::list<MPI_Message > Message_list; |
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| 94 | |
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| 95 | |
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| 96 | class OMPbarrier |
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| 97 | { |
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| 98 | private: |
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| 99 | int nbThreads; //<The number of threads for this barrier |
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| 100 | int currentNbThread; //<The current number of threads waiting |
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| 101 | bool sense; //<Direct barrier feedback protection |
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| 102 | omp_lock_t mutex; //<To have an atomic int |
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| 103 | |
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| 104 | OMPbarrier(OMPbarrier&){} |
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| 105 | OMPbarrier& operator=(OMPbarrier&){return *this;} |
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| 106 | |
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| 107 | public: |
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| 108 | /** Constructor with the number of threads */ |
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| 109 | explicit OMPbarrier(const int inNbThreads) |
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| 110 | : nbThreads(inNbThreads), currentNbThread(0), sense(false) { |
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| 111 | omp_init_lock( &mutex ); |
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| 112 | } |
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| 113 | |
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| 114 | /** Destructor, release the omp lock */ |
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| 115 | ~OMPbarrier(){ |
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| 116 | omp_destroy_lock( &mutex ); |
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| 117 | } |
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| 118 | |
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| 119 | /** Perform a barrier */ |
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| 120 | void wait(){ |
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| 121 | const bool mySense = sense; |
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| 122 | omp_set_lock( &mutex ); |
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| 123 | const int nbThreadsArrived = (++currentNbThread); |
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| 124 | omp_unset_lock( &mutex ); |
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| 125 | |
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| 126 | if(nbThreadsArrived == nbThreads) { |
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| 127 | currentNbThread = 0; |
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| 128 | sense = !sense; |
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| 129 | #pragma omp flush |
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| 130 | } |
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| 131 | else { |
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| 132 | volatile const bool* const ptSense = &sense; |
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| 133 | while( (*ptSense) == mySense){ |
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| 134 | } |
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| 135 | } |
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| 136 | } |
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| 137 | |
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| 138 | |
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| 139 | /** Change the number of threads */ |
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| 140 | void setNbThreads(const int inNbThread){ |
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| 141 | omp_set_lock( &mutex ); |
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| 142 | nbThreads = inNbThread; |
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| 143 | omp_unset_lock( &mutex ); |
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| 144 | } |
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| 145 | }; |
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| 146 | |
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| 147 | class ep_intercomm |
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| 148 | { |
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| 149 | public: |
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| 150 | |
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| 151 | |
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| 152 | #ifdef _intelmpi |
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| 153 | int mpi_inter_comm; |
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| 154 | #elif _openmpi |
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| 155 | void * mpi_inter_comm; |
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| 156 | #endif |
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| 157 | |
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| 158 | RANK_MAP *intercomm_rank_map; |
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| 159 | RANK_MAP *local_rank_map; |
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| 160 | RANK_MAP *remote_rank_map; |
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| 161 | |
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| 162 | |
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| 163 | SIZE_RANK_INFO size_rank_info[3]; |
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| 164 | |
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| 165 | |
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| 166 | MPI_Comm *local_comm; |
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| 167 | int intercomm_tag; |
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| 168 | |
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| 169 | ep_intercomm() |
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| 170 | { |
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| 171 | intercomm_rank_map = NULL; |
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| 172 | local_rank_map = NULL; |
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| 173 | remote_rank_map = NULL; |
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| 174 | } |
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| 175 | |
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| 176 | |
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| 177 | bool operator == (ep_intercomm right) |
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| 178 | { |
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| 179 | bool a = intercomm_rank_map == right.intercomm_rank_map; |
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| 180 | bool b = local_rank_map == right.local_rank_map; |
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| 181 | bool c = remote_rank_map == right.remote_rank_map; |
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| 182 | bool d = mpi_inter_comm == right.mpi_inter_comm; |
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| 183 | bool e = size_rank_info == right.size_rank_info; |
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| 184 | bool f = intercomm_tag == right.intercomm_tag; |
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| 185 | return a&&b&&c&&d&&e&&f; |
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| 186 | } |
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| 187 | |
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| 188 | bool operator != (ep_intercomm right) |
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| 189 | { |
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| 190 | bool a = intercomm_rank_map != right.intercomm_rank_map; |
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| 191 | bool b = local_rank_map != right.local_rank_map; |
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| 192 | bool c = remote_rank_map != right.remote_rank_map; |
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| 193 | bool d = mpi_inter_comm != right.mpi_inter_comm; |
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| 194 | bool e = size_rank_info != right.size_rank_info; |
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| 195 | bool f = intercomm_tag != right.intercomm_tag; |
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| 196 | return a||b||c||d||e||f; |
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| 197 | } |
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| 198 | |
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| 199 | |
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| 200 | }; |
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| 201 | |
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| 202 | |
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| 203 | class ep_communicator |
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| 204 | { |
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| 205 | public: |
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| 206 | |
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| 207 | SIZE_RANK_INFO size_rank_info[3]; // 0: ep_rank, ep_size |
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| 208 | // 1: ep_rank_loc, num_ep |
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| 209 | // 2: mpi_rank, mpi_size |
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| 210 | |
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| 211 | |
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| 212 | MPI_Comm *comm_list; |
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| 213 | |
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| 214 | Message_list *message_queue; |
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| 215 | |
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| 216 | |
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| 217 | int comm_label; |
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| 218 | |
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| 219 | ep_intercomm *intercomm; |
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| 220 | |
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| 221 | ep_communicator() |
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| 222 | { |
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| 223 | comm_list = NULL; |
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| 224 | message_queue = NULL; |
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| 225 | intercomm = NULL; |
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| 226 | } |
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| 227 | |
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| 228 | bool operator == (ep_communicator right) |
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| 229 | { |
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| 230 | bool a = size_rank_info == right.size_rank_info; |
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| 231 | bool b = comm_label == right.comm_label; |
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| 232 | bool c = intercomm == right.intercomm; |
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| 233 | return a&&b&&c; |
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| 234 | } |
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| 235 | |
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| 236 | bool operator != (ep_communicator right) |
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| 237 | { |
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| 238 | bool a = size_rank_info != right.size_rank_info; |
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| 239 | bool b = comm_label != right.comm_label; |
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| 240 | bool c = intercomm != right.intercomm; |
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| 241 | return a||b||c; |
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| 242 | } |
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| 243 | |
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| 244 | }; |
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| 245 | |
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| 246 | |
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| 247 | struct BUFFER |
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| 248 | { |
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| 249 | double *buf_double; |
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| 250 | float *buf_float; |
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| 251 | int *buf_int; |
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| 252 | long *buf_long; |
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| 253 | unsigned long *buf_ulong; |
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| 254 | char *buf_char; |
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| 255 | }; |
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| 256 | |
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| 257 | |
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| 258 | class MPI_Comm |
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| 259 | { |
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| 260 | public: |
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| 261 | |
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| 262 | #ifdef _intelmpi |
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| 263 | int mpi_comm; |
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| 264 | #elif _openmpi |
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| 265 | void * mpi_comm; |
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| 266 | #endif |
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| 267 | |
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| 268 | bool is_ep; |
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| 269 | bool is_intercomm; |
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| 270 | |
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| 271 | BUFFER *my_buffer; |
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| 272 | OMPbarrier *ep_barrier; |
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| 273 | RANK_MAP *rank_map; |
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| 274 | |
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| 275 | EP_Comm ep_comm_ptr; |
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| 276 | |
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| 277 | MPI_Comm *mem_bridge; |
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| 278 | |
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| 279 | #ifdef _intelmpi |
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| 280 | int mpi_bridge; |
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| 281 | #elif _openmpi |
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| 282 | void * mpi_bridge; |
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| 283 | #endif |
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| 284 | |
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| 285 | MPI_Comm() |
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| 286 | { |
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| 287 | is_ep = true; |
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| 288 | is_intercomm = false; |
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| 289 | my_buffer = NULL; |
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| 290 | ep_barrier = NULL; |
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| 291 | rank_map = NULL; |
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| 292 | ep_comm_ptr = NULL; |
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| 293 | mem_bridge = NULL; |
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| 294 | mpi_bridge = NULL; |
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| 295 | } |
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| 296 | |
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| 297 | #ifdef _intelmpi |
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| 298 | MPI_Comm(int comm) |
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| 299 | { |
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| 300 | is_ep = false; |
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| 301 | is_intercomm = false; |
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| 302 | my_buffer = NULL; |
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| 303 | ep_barrier = NULL; |
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| 304 | rank_map = NULL; |
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| 305 | ep_comm_ptr = NULL; |
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| 306 | mem_bridge = NULL; |
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| 307 | mpi_bridge = NULL; |
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| 308 | mpi_comm = comm; |
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| 309 | } |
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| 310 | |
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| 311 | #elif _openmpi |
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| 312 | |
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| 313 | MPI_Comm(void* comm) |
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| 314 | { |
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| 315 | is_ep = false; |
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| 316 | is_intercomm = false; |
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| 317 | my_buffer = NULL; |
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| 318 | ep_barrier = NULL; |
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| 319 | rank_map = NULL; |
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| 320 | ep_comm_ptr = NULL; |
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| 321 | mem_bridge = NULL; |
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| 322 | mpi_bridge = NULL; |
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| 323 | mpi_comm = comm; |
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| 324 | } |
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| 325 | #endif |
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| 326 | |
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| 327 | |
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| 328 | bool operator == (MPI_Comm right) |
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| 329 | { |
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| 330 | bool a = is_ep == right.is_ep; |
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| 331 | bool b = is_intercomm == right.is_intercomm; |
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| 332 | bool c = mpi_comm == right.mpi_comm; |
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| 333 | bool d = is_ep ? ep_comm_ptr == right.ep_comm_ptr : true; |
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| 334 | return a&&b&&c&&d; |
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| 335 | } |
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| 336 | |
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| 337 | bool operator != (MPI_Comm right) |
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| 338 | { |
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| 339 | bool a = is_ep != right.is_ep; |
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| 340 | bool b = is_intercomm != right.is_intercomm; |
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| 341 | bool c = mpi_comm != right.mpi_comm; |
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| 342 | bool d = is_ep ? ep_comm_ptr != right.ep_comm_ptr : true; |
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| 343 | |
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| 344 | return a||b||c||d; |
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| 345 | } |
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| 346 | |
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| 347 | }; |
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| 348 | |
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| 349 | |
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| 350 | class MPI_Info |
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| 351 | { |
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| 352 | public: |
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| 353 | |
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| 354 | #ifdef _intelmpi |
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| 355 | int mpi_info; |
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| 356 | #elif _openmpi |
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| 357 | void * mpi_info; |
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| 358 | #endif |
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| 359 | |
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| 360 | MPI_Info(){ } |
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| 361 | |
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| 362 | #ifdef _intelmpi |
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| 363 | MPI_Info(int info): mpi_info(info) {} |
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| 364 | #elif _openmpi |
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| 365 | MPI_Info(void* info): mpi_info(info) {} |
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| 366 | #endif |
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| 367 | }; |
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| 368 | |
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| 369 | |
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| 370 | class MPI_Request |
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| 371 | { |
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| 372 | public: |
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| 373 | |
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| 374 | #ifdef _intelmpi |
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| 375 | int mpi_request; |
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| 376 | #elif _openmpi |
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| 377 | void * mpi_request; |
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| 378 | #endif |
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| 379 | |
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| 380 | int type; //! type of the non-blocking communication. 1: Isend; 2:Irecv; 3:Imrecv; 4:Issend |
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| 381 | void* buf; |
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| 382 | |
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| 383 | int ep_src; |
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| 384 | int ep_tag; |
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| 385 | #ifdef _intelmpi |
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| 386 | int ep_datatype; |
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| 387 | #elif _openmpi |
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| 388 | void * ep_datatype; |
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| 389 | #endif |
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| 390 | |
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| 391 | MPI_Comm comm; //! EP communicator related to the communication |
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| 392 | |
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| 393 | MPI_Request() {} |
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| 394 | |
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| 395 | #ifdef _intelmpi |
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| 396 | MPI_Request(int request): mpi_request(request) {} |
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| 397 | #elif _openmpi |
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| 398 | MPI_Request(void* request): mpi_request(request) {} |
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| 399 | #endif |
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[1187] | 400 | |
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[1196] | 401 | |
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| 402 | bool operator == (MPI_Request right) |
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| 403 | { |
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| 404 | //bool a = mpi_request == right.mpi_request; |
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| 405 | bool b = type == right.type; |
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| 406 | bool c = buf == right.buf; |
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| 407 | bool d = ep_src == right.ep_src; |
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| 408 | bool e = ep_tag == right.ep_tag; |
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| 409 | bool f = ep_datatype == right.ep_datatype; |
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| 410 | return b&&c&&d&&e&&f; |
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| 411 | } |
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[1134] | 412 | }; |
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| 413 | |
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| 414 | |
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| 415 | class MPI_Aint |
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| 416 | { |
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| 417 | public: |
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| 418 | |
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| 419 | unsigned long mpi_aint; |
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| 420 | |
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| 421 | MPI_Aint() {} |
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| 422 | MPI_Aint(int a): mpi_aint(a) {} |
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| 423 | }; |
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| 424 | |
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| 425 | class MPI_Fint |
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| 426 | { |
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| 427 | public: |
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| 428 | |
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| 429 | int mpi_fint; |
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| 430 | |
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| 431 | MPI_Fint() {} |
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| 432 | MPI_Fint(int f): mpi_fint(f) {} |
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| 433 | |
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| 434 | }; |
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| 435 | |
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| 436 | |
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| 437 | static MPI_Comm *passage; |
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| 438 | |
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| 439 | static int TAG = 40000; |
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| 440 | |
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| 441 | static std::list<std::pair<std::pair<int, int>, MPI_Comm * > > tag_list; |
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| 442 | |
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| 443 | static std::map<std::pair<int, int>, MPI_Comm > fc_comm_map; |
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| 444 | |
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| 445 | static std::map<std::pair<int, int>, MPI_Comm > *fc_comm_map_ptr; |
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| 446 | #pragma omp threadprivate(fc_comm_map_ptr) |
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| 447 | // <MPI_Fint,thread_num> EP_Comm |
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| 448 | |
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| 449 | } |
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| 450 | |
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| 451 | |
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| 452 | |
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| 453 | #endif // EP_TYPE_HPP_INCLUDED |
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[1196] | 454 | |
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