source: XIOS/dev/dev_trunk_omp/GENERIC_TESTCASE/job_irene.sh @ 1746

#!/bin/bash
######################
## CURIE   TGCC/CEA ##
######################
#MSUB -r XIOS
#MSUB -o client_output.out    # standard output
#MSUB -e client_error.err    #error output
#MSUB -eo
#MSUB -c 1
#MSUB -n 16  # Number of MPI tasks (SPMD case) or cores (MPMD case)
#MSUB -X 
#MSUB -x 
#MSUB -T 1800      # Wall clock limit (seconds)
#MSUB -q skylake           # thin nodes
#MSUB -A devcmip6
#MSUB -Q test
#MSUB -m work

cd $BRIDGE_MSUB_PWD
module unload netcdf-c netcdf-fortran hdf5 flavor perl hdf5 boost blitz mpi gnu
module load gnu
module load mpi/intelmpi/2017.0.6.256
module load flavor/buildcompiler/intel/17
module load flavor/hdf5/parallel
module load netcdf-fortran/4.4.4
module load hdf5/1.8.20
module load boost
module load blitz
module load feature/bridge/heterogenous_mpmd
module load arm-forge
module load nco
module load cdo

export KMP_STACKSIZE=3g
export KMP_LIBRARY=turnaround
export MKL_SERIAL=YES
export OMP_NUM_THREADS=${BRIDGE_MSUB_NCORE}

set -x 

#export GMON_OUT_PREFIX='gmon.out'

#export TAU_MAKEFILE=$TAU_MAKEFILEDIR/Makefile.tau-icpc-papi-mpi-pdt-openmp-opari-scorep
#ccc_mprun -E '--enable_perf' amplxe-cl -collect hotspots -r ${PWD}/1omp_vtune/vtune_results ../../bin/test_send.exe

#ccc_mprun ../build_prod/bin/test_omp.exe 4
#ccc_mprun tau_exec -io ../../bin/test_send.exe
#ddt -start -n 8 ../buile_intelmpi/bin/test_omp.exe




#============================= Run EP with IntelMPI =============================



export machine_name=irene
export xios_dir=/ccc/cont003/home/gencmip6/wangyush/XIOS/dev_trunk_omp
export build_dir=build_ep_intelmpi_prod

rm -f setup.sh
touch setup.sh
>setup.sh
for i in $(ls -d test_*/)
do
  cp setup.py ${i%%/}      
  cp run_sub_test.sh ${i%%/}      
  echo "bash -c \"cd " ${i%%/} " && python setup.py\" ">> setup.sh
  echo "echo \"setup.py called from " ${i%%/} "\"">> setup.sh
done

export output=$(python user_config.py 2>&1 >/dev/null)

if [ "$output" -ne 0 ]
then
        echo "user_config.py failed"
        exit
else
        echo "user_config.py OK"
fi


cmake .
ctest -V 
#ctest --output-on-failure
make report

#echo "Generic testcase report" | mailx -s "report" -a report.html yushan.wang@lsce.ipsl.fr

rm -f test_*/setup.py
rm -f test_*/run_sub_test.sh
rm -f test_*/run_test_*.py
rm -f test_*/CMakeLists.txt
rm -f test_*/context_grid_dynamico.xml
rm -f test_*/dynamico_grid.nc
rm -f test_*/default_param.pyc
rm -f test_*/user_param.pyc
rm -f test_*/user_param.py.*

rm -f report_ep_intelmpi.*
cp report.txt report_ep_intelmpi.txt
cp report.html report_ep_intelmpi.html





#============================= Run MPI with IntelMPI =============================









export machine_name=irene
export xios_dir=/ccc/cont003/home/gencmip6/wangyush/XIOS/dev_trunk_omp
export build_dir=build_mpi_intelmpi_prod

rm -f setup.sh
touch setup.sh
>setup.sh
for i in $(ls -d test_*/)
do
  cp setup.py ${i%%/}      
  cp run_sub_test.sh ${i%%/}      
  echo "bash -c \"cd " ${i%%/} " && python setup.py\" ">> setup.sh
  echo "echo \"setup.py called from " ${i%%/} "\"">> setup.sh
done

export output=$(python user_config.py 2>&1 >/dev/null)

if [ "$output" -ne 0 ]
then
        echo "user_config.py failed"
        exit
else
        echo "user_config.py OK"
fi


cmake .
ctest -V 
#ctest --output-on-failure
make report

#echo "Generic testcase report" | mailx -s "report" -a report.html yushan.wang@lsce.ipsl.fr

rm -f test_*/setup.py
rm -f test_*/run_sub_test.sh
rm -f test_*/run_test_*.py
rm -f test_*/CMakeLists.txt
rm -f test_*/context_grid_dynamico.xml
rm -f test_*/dynamico_grid.nc
rm -f test_*/default_param.pyc
rm -f test_*/user_param.pyc
rm -f test_*/user_param.py.*

rm -f report_mpi_intelmpi.*
cp report.txt report_mpi_intelmpi.txt
cp report.html report_mpi_intelmpi.html