#!/bin/bash ##SBATCH --nodes=2 #SBATCH --ntasks=8 # Nombre total de processus MPI #SBATCH --ntasks-per-node=16 ##SBATCH --cpus-per-task=1 #SBATCH --hint=nomultithread #SBATCH -t 00:10:00 # Temps elapsed maximum d'exécution #SBATCH -o output.out # Nom du fichier de sortie #SBATCH -e error.err # Nom du fichier d'erreur ##SBATCH -p cpu_port # Nom de la partition d'exécution ##SBATCH -A sos@cpu ##SBATCH --distribution=arbitrary #SBATCH --account=psl@cpu cd ${SLURM_SUBMIT_DIR} module unload intel-all hdf5 netcdf netcdf-cxx netcdf-fortran module load intel-all/19.0.4 module load hdf5/1.10.5/intel-19.0.4-mpi module load netcdf/4.7.2/intel-19.0.4-mpi module load netcdf-cxx/4.2/intel-19.0.4-mpi module load netcdf-fortran/4.5.2/intel-19.0.4-mpi module load cmake module load cdo module load subversion #module load arm-forge ulimit -c 0 #export ALLINEA_NO_TIMEOUT=1 # Compile XIOS in case of newer revision bash -c "cd .. && ./make_xios --arch X64_JEANZAY --prod --omp --job 4 --build_dir build_prod" # Copy and extract reference from store cp $STORE/XIOS/reference/*.zip ./ZIP for i in $(ls ZIP/) do echo ${i%%} folder=$(echo ${i%%} | sed -e 's/\(.zip\)*$//g') echo $folder bash -c "cd $folder && rm -rf config_*" bash -c "cp ZIP/${i%%} ./ && unzip ${i%%} && rm -f ${i%%}" done rm -rf test_domain_algo/config_* export machine_name=jeanzay export machine_full_name=Jean-Zay export build_dir=build_prod export xios_dir=/gpfswork/rech/psl/rpsl954/xios/dev_trunk_omp rm -f plein_report.txt echo -n "#revision " >> plein_report.txt svn info --show-item revision .. >> plein_report.txt echo -n "#relurl " >> plein_report.txt svn info --show-item relative-url .. >> plein_report.txt echo -n "#machine " >> plein_report.txt echo $machine_name >> plein_report.txt echo -n "#build_dir " >> plein_report.txt echo $xios_dir/$build_dir >> plein_report.txt export arch_dir=$(readlink ../$build_dir/arch.fcm .. 2>&1) echo $arch_dir my_arch=$(echo $arch_dir | sed 's|.*/arch-||' | sed 's|\(.*\).fcm.*|\1|' 2>&1) echo $my_arch echo -n "#arch " >> plein_report.txt echo $my_arch >> plein_report.txt export xios_revision=$(svn info --show-item revision .. 2>&1) echo $xios_revision rm -f setup.sh touch setup.sh >setup.sh for i in $(ls -d test_*/) do cp setup.py ${i%%/} cp run_sub_test.sh ${i%%/} echo "bash -c \"cd " ${i%%/} " && python setup.py \" ">> setup.sh echo "echo \"setup.py called from " ${i%%/} "\"">> setup.sh done export output=$(python user_config.py 2>&1 >/dev/null) if [ "$output" -ne 0 ] then echo "user_config.py failed" exit else echo "user_config.py OK" fi cmake . ctest -V #ctest --output-on-failure make report #echo "Generic testcase report" | mailx -s "report" -a report.html yushan.wang@lsce.ipsl.fr rm -f test_*/setup.py rm -f test_*/run_sub_test.sh rm -f test_*/run_test_*.py rm -f test_*/CMakeLists.txt rm -f test_*/context_grid_dynamico.xml rm -f test_*/dynamico_grid.nc rm -f test_*/default_param.pyc rm -f test_*/user_param.pyc rm -f test_*/user_param.py.* cp plein_report.txt ../html/jz_plein_report_$xios_revision.txt mkdir -p ../$machine_full_name mkdir -p ../$machine_full_name/$xios_revision mkdir -p ../$machine_full_name/$xios_revision/GENERIC_TESTCASE bash -c "cd ../html/ && python generate.py" for i in $(ls -d test_*/) do mkdir -p ../$machine_full_name/$xios_revision/GENERIC_TESTCASE/${i%%} cp ${i%%/}/user_params.def ../$machine_full_name/$xios_revision/GENERIC_TESTCASE/${i%%/} for j in $(ls -d ${i%%/}/config_*/) do mkdir -p ../$machine_full_name/$xios_revision/GENERIC_TESTCASE/${j%%/} mkdir -p ../$machine_full_name/$xios_revision/GENERIC_TESTCASE/${j%%/}/setup cp ${j%%/}/setup/all_param.def ../$machine_full_name/$xios_revision/GENERIC_TESTCASE/${j%%/}/setup cp ${j%%/}/setup/user_param.def ../$machine_full_name/$xios_revision/GENERIC_TESTCASE/${j%%/}/setup done done