[591] | 1 | #ifndef __XIOS_CDomain__ |
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| 2 | #define __XIOS_CDomain__ |
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[219] | 3 | |
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[591] | 4 | /// XIOS headers /// |
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| 5 | #include "xios_spl.hpp" |
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[219] | 6 | #include "group_factory.hpp" |
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| 7 | |
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| 8 | #include "declare_group.hpp" |
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[540] | 9 | #include "declare_ref_func.hpp" |
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[300] | 10 | #include "event_client.hpp" |
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| 11 | #include "event_server.hpp" |
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| 12 | #include "buffer_in.hpp" |
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[369] | 13 | #include "array_new.hpp" |
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| 14 | #include "attribute_array.hpp" |
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[449] | 15 | #include "attribute_enum.hpp" |
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[631] | 16 | #include "transformation.hpp" |
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| 17 | #include "transformation_enum.hpp" |
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[1025] | 18 | #include "server_distribution_description.hpp" |
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[1601] | 19 | #include "mpi_std.hpp" |
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[878] | 20 | #include "mesh.hpp" |
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| 21 | |
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[335] | 22 | namespace xios { |
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[509] | 23 | |
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[219] | 24 | /// ////////////////////// Déclarations ////////////////////// /// |
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| 25 | |
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| 26 | class CDomainGroup; |
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| 27 | class CDomainAttributes; |
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| 28 | class CDomain; |
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[878] | 29 | class CFile; |
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[219] | 30 | |
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| 31 | ///-------------------------------------------------------------- |
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| 32 | |
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| 33 | // Declare/Define CDomainAttribute |
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| 34 | BEGIN_DECLARE_ATTRIBUTE_MAP(CDomain) |
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| 35 | # include "domain_attribute.conf" |
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[775] | 36 | # include "domain_attribute_private.conf" |
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[219] | 37 | END_DECLARE_ATTRIBUTE_MAP(CDomain) |
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| 38 | |
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| 39 | ///-------------------------------------------------------------- |
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| 40 | |
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| 41 | class CDomain |
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| 42 | : public CObjectTemplate<CDomain> |
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| 43 | , public CDomainAttributes |
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| 44 | { |
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[1158] | 45 | /// typedef /// |
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| 46 | typedef CObjectTemplate<CDomain> SuperClass; |
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| 47 | typedef CDomainAttributes SuperClassAttribute; |
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| 48 | public: |
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[300] | 49 | enum EEventId |
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| 50 | { |
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[1025] | 51 | EVENT_ID_INDEX, EVENT_ID_LON, EVENT_ID_LAT, |
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[1646] | 52 | EVENT_ID_AREA, |
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[1236] | 53 | EVENT_ID_DATA_INDEX, EVENT_ID_SERVER_ATTRIBUT |
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[300] | 54 | } ; |
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[509] | 55 | |
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[676] | 56 | public: |
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[219] | 57 | |
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| 58 | typedef CDomainAttributes RelAttributes; |
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| 59 | typedef CDomainGroup RelGroup; |
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[631] | 60 | typedef CTransformation<CDomain>::TransformationMapTypes TransMapTypes; |
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[219] | 61 | |
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| 62 | /// Constructeurs /// |
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| 63 | CDomain(void); |
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| 64 | explicit CDomain(const StdString & id); |
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| 65 | CDomain(const CDomain & domain); // Not implemented yet. |
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| 66 | CDomain(const CDomain * const domain); // Not implemented yet. |
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| 67 | |
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[622] | 68 | static CDomain* createDomain(); |
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[878] | 69 | |
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| 70 | CMesh* mesh; |
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[924] | 71 | void assignMesh(const StdString, const int); |
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[878] | 72 | |
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[631] | 73 | virtual void parse(xml::CXMLNode & node); |
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| 74 | |
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[1345] | 75 | void setContextClient(CContextClient* contextClient); |
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| 76 | |
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[219] | 77 | /// Vérifications /// |
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| 78 | void checkAttributes(void); |
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[509] | 79 | void checkAttributesOnClient(); |
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[657] | 80 | void checkAttributesOnClientAfterTransformation(); |
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[676] | 81 | void checkEligibilityForCompressedOutput(void); |
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| 82 | |
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[509] | 83 | void sendCheckedAttributes(); |
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| 84 | |
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[631] | 85 | bool hasTransformation(); |
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| 86 | void solveInheritanceTransformation(); |
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| 87 | TransMapTypes getAllTransformations(); |
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[687] | 88 | void redistribute(int nbLocalDomain); |
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[823] | 89 | void duplicateTransformation(CDomain*); |
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[836] | 90 | CTransformation<CDomain>* addTransformation(ETranformationType transType, const StdString& id=""); |
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[631] | 91 | |
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[1158] | 92 | public: |
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| 93 | const std::set<StdString> & getRelFiles(void) const; |
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[219] | 94 | bool IsWritten(const StdString & filename) const; |
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[676] | 95 | bool isWrittenCompressed(const StdString& filename) const; |
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[1144] | 96 | |
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[1601] | 97 | int getNumberWrittenIndexes(ep_lib::MPI_Comm writtenCom); |
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| 98 | int getTotalNumberWrittenIndexes(ep_lib::MPI_Comm writtenCom); |
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| 99 | int getOffsetWrittenIndexes(ep_lib::MPI_Comm writtenCom); |
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| 100 | CArray<int,1>& getCompressedIndexToWriteOnServer(ep_lib::MPI_Comm writtenCom); |
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[676] | 101 | |
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[1330] | 102 | std::map<int, StdSize> getAttributesBufferSize(CContextClient* client, bool bufferForWriting = false); |
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[731] | 103 | |
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[219] | 104 | bool isEmpty(void) const; |
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[594] | 105 | bool isDistributed(void) const; |
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[1025] | 106 | bool isCompressible(void) const; |
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| 107 | |
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[1158] | 108 | std::vector<int> getNbGlob(); |
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| 109 | bool isEqual(CDomain* domain); |
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[1236] | 110 | |
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| 111 | static bool dispatchEvent(CEventServer& event); |
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| 112 | |
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[676] | 113 | public: |
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[219] | 114 | /// Mutateur /// |
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| 115 | void addRelFile(const StdString & filename); |
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[1236] | 116 | void addRelFileCompressed(const StdString& filename); |
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| 117 | |
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[1129] | 118 | void computeWrittenIndex(); |
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[1601] | 119 | void computeWrittenCompressedIndex(ep_lib::MPI_Comm); |
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[821] | 120 | |
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| 121 | void AllgatherRectilinearLonLat(CArray<double,1>& lon, CArray<double,1>& lat, |
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[809] | 122 | CArray<double,1>& lon_g, CArray<double,1>& lat_g); |
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[821] | 123 | |
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| 124 | void fillInRectilinearBoundLonLat(CArray<double,1>& lon, CArray<double,1>& lat, |
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[809] | 125 | CArray<double,2>& boundsLon, CArray<double,2>& boundsLat); |
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[1158] | 126 | |
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| 127 | void fillInLonLat(); |
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| 128 | bool distributionAttributesHaveValue() const; |
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[611] | 129 | |
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[1215] | 130 | size_t getGlobalWrittenSize() ; |
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[219] | 131 | /// Destructeur /// |
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| 132 | virtual ~CDomain(void); |
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| 133 | |
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| 134 | /// Accesseurs statiques /// |
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| 135 | static StdString GetName(void); |
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| 136 | static StdString GetDefName(void); |
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[509] | 137 | |
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[1236] | 138 | static ENodeType GetType(void); |
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| 139 | |
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| 140 | public: |
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| 141 | CArray<double, 1> lonvalue, latvalue; |
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| 142 | CArray<double, 2> bounds_lonvalue, bounds_latvalue; |
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| 143 | CArray<double, 1> areavalue; |
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| 144 | |
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[1646] | 145 | CArray<int,1> localIndexToWriteOnServer; |
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[1236] | 146 | |
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[1311] | 147 | CArray<bool, 1> domainMask; // mask_1d, mask_2d -> domainMask |
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| 148 | CArray<bool, 1> localMask; // domainMask + indexing |
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[384] | 149 | bool isCurvilinear ; |
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[449] | 150 | bool hasBounds ; |
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[611] | 151 | bool hasArea; |
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[665] | 152 | bool hasLonLat; |
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[953] | 153 | bool hasPole ; |
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[1578] | 154 | bool hasLatInReadFile_ ; // specify if latitude is defined on read file, so it can be read later when grid distribution will be defined |
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| 155 | bool hasBoundsLatInReadFile_ ; // specify if latitude boundarues are defined on read file, so it can be read later when grid distribution will be defined |
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| 156 | bool hasLonInReadFile_ ; // specify if longitude is defined on read file, so it can be read later when grid distribution will be defined |
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| 157 | bool hasBoundsLonInReadFile_ ; // specify if longitude boundaries are defined on read file, so it can be read later when grid distribution will be defined |
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[953] | 158 | |
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[1291] | 159 | void computeLocalMask(void) ; |
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[631] | 160 | private: |
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[667] | 161 | void checkDomain(void); |
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| 162 | void checkLocalIDomain(void); |
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| 163 | void checkLocalJDomain(void); |
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| 164 | |
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| 165 | void checkMask(void); |
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| 166 | void checkDomainData(void); |
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| 167 | void checkCompression(void); |
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| 168 | |
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| 169 | void checkBounds(void); |
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| 170 | void checkArea(void); |
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| 171 | void checkLonLat(); |
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| 172 | |
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[1025] | 173 | void setTransformations(const TransMapTypes&); |
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[1158] | 174 | void computeNGlobDomain(); |
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[1025] | 175 | void sendAttributes(); |
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[665] | 176 | void sendIndex(); |
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[1025] | 177 | void sendDistributionAttributes(); |
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[665] | 178 | void sendArea(); |
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[1236] | 179 | void sendLonLat(); |
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[1025] | 180 | void sendDataIndex(); |
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[1129] | 181 | void convertLonLatValue(); |
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[1158] | 182 | void fillInRectilinearLonLat(); |
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| 183 | void fillInCurvilinearLonLat(); |
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| 184 | void fillInUnstructuredLonLat(); |
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[1236] | 185 | |
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| 186 | static void recvDistributionAttributes(CEventServer& event); |
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| 187 | static void recvIndex(CEventServer& event); |
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| 188 | static void recvLon(CEventServer& event); |
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| 189 | static void recvLat(CEventServer& event); |
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| 190 | static void recvArea(CEventServer& event); |
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| 191 | static void recvDataIndex(CEventServer& event); |
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| 192 | void recvDistributionAttributes(CBufferIn& buffer); |
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| 193 | void recvIndex(std::map<int, CBufferIn*>& rankBuffers); |
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| 194 | void recvLon(std::map<int, CBufferIn*>& rankBuffers); |
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| 195 | void recvLat(std::map<int, CBufferIn*>& rankBuffers); |
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| 196 | void recvArea(std::map<int, CBufferIn*>& rankBuffers); |
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| 197 | void recvDataIndex(std::map<int, CBufferIn*>& rankBuffers); |
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| 198 | |
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| 199 | void completeLonLatClient(void); |
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| 200 | void computeConnectedClients(); |
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| 201 | |
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[1025] | 202 | private: |
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[1345] | 203 | |
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| 204 | /** Clients that have to send a domain. There can be multiple clients in case of secondary server, otherwise only one client. */ |
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[1353] | 205 | std::list<CContextClient*> clients; |
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| 206 | std::set<CContextClient*> clientsSet; |
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[1345] | 207 | |
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[1129] | 208 | bool isChecked, computedWrittenIndex_; |
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[676] | 209 | std::set<StdString> relFiles, relFilesCompressed; |
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[551] | 210 | bool isClientChecked; // Verify whether all attributes of domain on the client side are good |
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[657] | 211 | bool isClientAfterTransformationChecked; |
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[1236] | 212 | std::map<int, CArray<int,1> > indGlob_; |
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[1337] | 213 | std::map<int, map<int,int> > nbSenders; // Mapping of number of communicating client to a server |
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[1025] | 214 | |
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[1337] | 215 | /** Global index of each client sent to server: map<serverSize, map<serverRank, indexes>> */ |
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[1542] | 216 | std::map<int, std::unordered_map<int, vector<size_t> > > indSrv_; |
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[1236] | 217 | // std::map<CContextClient*, std::map<int, vector<int> > > indWrittenSrv_; // Global written index of each client sent to server |
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[676] | 218 | std::vector<int> indexesToWrite; |
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[1236] | 219 | std::vector<int> recvClientRanks_; |
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[1249] | 220 | std::map<int,int> numberWrittenIndexes_, totalNumberWrittenIndexes_, offsetWrittenIndexes_; |
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| 221 | std::map<int, CArray<int, 1> > compressedIndexToWriteOnServer; |
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[1337] | 222 | std::map<int, std::map<int,size_t> > connectedDataSize_; |
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| 223 | std::map<int, std::vector<int> > connectedServerRank_; |
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[1236] | 224 | |
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[676] | 225 | //! True if and only if the data defined on the domain can be outputted in a compressed way |
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| 226 | bool isCompressible_; |
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[715] | 227 | bool isRedistributed_; |
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[1025] | 228 | TransMapTypes transformationMap_; |
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[657] | 229 | bool isUnstructed_; |
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[1542] | 230 | std::unordered_map<size_t,size_t> globalLocalIndexMap_; |
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[953] | 231 | |
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[836] | 232 | private: |
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| 233 | static bool initializeTransformationMap(std::map<StdString, ETranformationType>& m); |
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[1601] | 234 | static bool initializeTransformationMap(); |
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| 235 | static std::map<StdString, ETranformationType> *transformationMapList_ptr; |
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| 236 | #pragma omp threadprivate(transformationMapList_ptr) |
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[836] | 237 | |
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[1646] | 238 | |
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[540] | 239 | DECLARE_REF_FUNC(Domain,domain) |
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| 240 | |
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[219] | 241 | }; // class CDomain |
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| 242 | |
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| 243 | ///-------------------------------------------------------------- |
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| 244 | |
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| 245 | // Declare/Define CDomainGroup and CDomainDefinition |
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| 246 | DECLARE_GROUP(CDomain); |
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| 247 | |
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| 248 | ///-------------------------------------------------------------- |
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| 249 | |
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[335] | 250 | } // namespace xios |
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[219] | 251 | |
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[878] | 252 | #endif //__XIOS_CDomain__ |
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