1 | #include "domain.hpp" |
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2 | |
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3 | #include "attribute_template.hpp" |
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4 | #include "object_template.hpp" |
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5 | #include "group_template.hpp" |
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6 | |
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7 | #include "xios_spl.hpp" |
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8 | #include "event_client.hpp" |
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9 | #include "event_server.hpp" |
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10 | #include "buffer_in.hpp" |
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11 | #include "message.hpp" |
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12 | #include "type.hpp" |
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13 | #include "context.hpp" |
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14 | #include "context_client.hpp" |
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15 | #include "context_server.hpp" |
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16 | #include "array_new.hpp" |
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17 | #include "distribution_client.hpp" |
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18 | #include "server_distribution_description.hpp" |
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19 | #include "client_server_mapping_distributed.hpp" |
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20 | #include "zoom_domain.hpp" |
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21 | #include "interpolate_domain.hpp" |
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22 | #include "generate_rectilinear_domain.hpp" |
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23 | |
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24 | #include <algorithm> |
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25 | |
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26 | namespace xios { |
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27 | |
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28 | /// ////////////////////// Définitions ////////////////////// /// |
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29 | |
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30 | CDomain::CDomain(void) |
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31 | : CObjectTemplate<CDomain>(), CDomainAttributes() |
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32 | , isChecked(false), relFiles(), isClientChecked(false), nbConnectedClients_(), indSrv_(), connectedServerRank_() |
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33 | , hasBounds(false), hasArea(false), isDistributed_(false), nGlobDomain_(), isCompressible_(false), isUnstructed_(false) |
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34 | , global_zoom_ni(0), global_zoom_ibegin(0), global_zoom_nj(0), global_zoom_jbegin(0) |
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35 | , isClientAfterTransformationChecked(false), hasLonLat(false) |
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36 | , lonvalue_client(), latvalue_client(), bounds_lon_client(), bounds_lat_client() |
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37 | , srcObject_(0), isRedistributed_(false) |
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38 | { /* Ne rien faire de plus */ } |
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39 | |
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40 | CDomain::CDomain(const StdString & id) |
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41 | : CObjectTemplate<CDomain>(id), CDomainAttributes() |
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42 | , isChecked(false), relFiles(), isClientChecked(false), nbConnectedClients_(), indSrv_(), connectedServerRank_() |
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43 | , hasBounds(false), hasArea(false), isDistributed_(false), nGlobDomain_(), isCompressible_(false), isUnstructed_(false) |
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44 | , global_zoom_ni(0), global_zoom_ibegin(0), global_zoom_nj(0), global_zoom_jbegin(0) |
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45 | , isClientAfterTransformationChecked(false), hasLonLat(false) |
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46 | , lonvalue_client(), latvalue_client(), bounds_lon_client(), bounds_lat_client() |
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47 | , srcObject_(0), isRedistributed_(false) |
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48 | { /* Ne rien faire de plus */ } |
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49 | |
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50 | CDomain::~CDomain(void) |
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51 | { |
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52 | } |
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53 | |
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54 | ///--------------------------------------------------------------- |
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55 | |
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56 | CDomain* CDomain::createDomain() |
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57 | { |
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58 | CDomain* domain = CDomainGroup::get("domain_definition")->createChild(); |
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59 | return domain; |
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60 | } |
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61 | |
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62 | void CDomain::duplicateAttributes(CDomain* domain) |
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63 | { |
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64 | domain->setAttributes(this); |
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65 | } |
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66 | |
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67 | const std::set<StdString> & CDomain::getRelFiles(void) const |
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68 | { |
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69 | return (this->relFiles); |
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70 | } |
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71 | |
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72 | //---------------------------------------------------------------- |
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73 | |
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74 | const std::vector<int>& CDomain::getIndexesToWrite(void) const |
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75 | { |
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76 | return indexesToWrite; |
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77 | } |
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78 | |
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79 | /*! |
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80 | Returns the number of indexes written by each server. |
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81 | \return the number of indexes written by each server |
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82 | */ |
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83 | int CDomain::getNumberWrittenIndexes() const |
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84 | { |
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85 | return numberWrittenIndexes_; |
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86 | } |
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87 | |
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88 | /*! |
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89 | Returns the total number of indexes written by the servers. |
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90 | \return the total number of indexes written by the servers |
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91 | */ |
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92 | int CDomain::getTotalNumberWrittenIndexes() const |
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93 | { |
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94 | return totalNumberWrittenIndexes_; |
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95 | } |
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96 | |
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97 | /*! |
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98 | Returns the offset of indexes written by each server. |
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99 | \return the offset of indexes written by each server |
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100 | */ |
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101 | int CDomain::getOffsetWrittenIndexes() const |
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102 | { |
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103 | return offsetWrittenIndexes_; |
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104 | } |
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105 | |
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106 | //---------------------------------------------------------------- |
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107 | |
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108 | /*! |
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109 | * Compute the minimum buffer size required to send the attributes to the server(s). |
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110 | * |
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111 | * \return A map associating the server rank with its minimum buffer size. |
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112 | */ |
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113 | std::map<int, StdSize> CDomain::getAttributesBufferSize() |
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114 | { |
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115 | CContextClient* client = CContext::getCurrent()->client; |
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116 | |
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117 | std::map<int, StdSize> attributesSizes = getMinimumBufferSizeForAttributes(); |
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118 | |
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119 | if (client->isServerLeader()) |
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120 | { |
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121 | // size estimation for sendServerAttribut |
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122 | size_t size = 11 * sizeof(size_t); |
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123 | |
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124 | const std::list<int>& ranks = client->getRanksServerLeader(); |
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125 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
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126 | { |
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127 | if (size > attributesSizes[*itRank]) |
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128 | attributesSizes[*itRank] = size; |
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129 | } |
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130 | } |
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131 | |
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132 | std::map<int, std::vector<size_t> >::const_iterator it, ite = indSrv_.end(); |
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133 | for (it = indSrv_.begin(); it != ite; ++it) |
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134 | { |
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135 | // size estimation for sendIndex (and sendArea which is always smaller or equal) |
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136 | size_t sizeIndexEvent = 2 * sizeof(size_t) + 2 * CArray<int,1>::size(it->second.size()); |
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137 | if (isCompressible_) |
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138 | sizeIndexEvent += CArray<int,1>::size(indWrittenSrv_[it->first].size()); |
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139 | |
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140 | // size estimation for sendLonLat |
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141 | size_t sizeLonLatEvent = CArray<double,1>::size(it->second.size()); |
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142 | if (hasBounds) |
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143 | sizeLonLatEvent += CArray<double,2>::size(nvertex * it->second.size()); |
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144 | |
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145 | size_t size = CEventClient::headerSize + getId().size() + sizeof(size_t) + std::max(sizeIndexEvent, sizeLonLatEvent); |
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146 | if (size > attributesSizes[it->first]) |
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147 | attributesSizes[it->first] = size; |
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148 | } |
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149 | |
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150 | return attributesSizes; |
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151 | } |
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152 | |
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153 | //---------------------------------------------------------------- |
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154 | |
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155 | bool CDomain::isEmpty(void) const |
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156 | { |
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157 | return ((this->zoom_ni_srv == 0) || |
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158 | (this->zoom_nj_srv == 0)); |
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159 | } |
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160 | |
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161 | //---------------------------------------------------------------- |
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162 | |
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163 | bool CDomain::IsWritten(const StdString & filename) const |
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164 | { |
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165 | return (this->relFiles.find(filename) != this->relFiles.end()); |
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166 | } |
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167 | |
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168 | bool CDomain::isWrittenCompressed(const StdString& filename) const |
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169 | { |
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170 | return (this->relFilesCompressed.find(filename) != this->relFilesCompressed.end()); |
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171 | } |
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172 | |
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173 | //---------------------------------------------------------------- |
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174 | |
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175 | bool CDomain::isDistributed(void) const |
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176 | { |
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177 | return isDistributed_; |
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178 | } |
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179 | |
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180 | //---------------------------------------------------------------- |
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181 | |
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182 | /*! |
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183 | * Test whether the data defined on the domain can be outputted in a compressed way. |
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184 | * |
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185 | * \return true if and only if a mask was defined for this domain |
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186 | */ |
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187 | bool CDomain::isCompressible(void) const |
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188 | { |
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189 | return isCompressible_; |
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190 | } |
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191 | |
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192 | //---------------------------------------------------------------- |
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193 | |
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194 | void CDomain::addRelFile(const StdString & filename) |
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195 | { |
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196 | this->relFiles.insert(filename); |
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197 | } |
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198 | |
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199 | void CDomain::addRelFileCompressed(const StdString& filename) |
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200 | { |
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201 | this->relFilesCompressed.insert(filename); |
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202 | } |
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203 | |
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204 | |
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205 | StdString CDomain::GetName(void) { return (StdString("domain")); } |
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206 | StdString CDomain::GetDefName(void){ return (CDomain::GetName()); } |
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207 | ENodeType CDomain::GetType(void) { return (eDomain); } |
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208 | |
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209 | //---------------------------------------------------------------- |
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210 | |
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211 | /*! |
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212 | Redistribute RECTILINEAR domain with a number of local domains. |
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213 | All attributes ni,nj,ibegin,jbegin (if defined) will be rewritten |
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214 | The optional attributes lonvalue, latvalue will be added. Because this function only serves (for now) |
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215 | for interpolation from unstructured domain to rectilinear one, range of latvalue is 0-360 and lonvalue is -90 - +90 |
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216 | \param [in] nbLocalDomain number of local domain on the domain destination |
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217 | */ |
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218 | void CDomain::redistribute(int nbLocalDomain) |
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219 | { |
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220 | if (this->isRedistributed_) return; |
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221 | if (type_attr::rectilinear == type) |
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222 | { |
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223 | this->isRedistributed_ = true; |
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224 | |
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225 | CContext* context = CContext::getCurrent(); |
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226 | CContextClient* client = context->client; |
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227 | int rankClient = client->clientRank; |
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228 | int rankOnDomain = rankClient%nbLocalDomain; |
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229 | |
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230 | if (ni_glo.isEmpty() || ni_glo <= 0 ) |
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231 | { |
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232 | ERROR("CDomain::redistribute(int nbLocalDomain)", |
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233 | << "[ Id = " << this->getId() << " ] " |
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234 | << "The global domain is badly defined," |
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235 | << " check the \'ni_glo\' value !") |
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236 | } |
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237 | |
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238 | if (nj_glo.isEmpty() || nj_glo <= 0 ) |
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239 | { |
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240 | ERROR("CDomain::redistribute(int nbLocalDomain)", |
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241 | << "[ Id = " << this->getId() << " ] " |
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242 | << "The global domain is badly defined," |
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243 | << " check the \'nj_glo\' value !") |
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244 | } |
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245 | |
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246 | int globalDomainSize = ni_glo * nj_glo; |
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247 | if (globalDomainSize <= nbLocalDomain) |
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248 | { |
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249 | for (int idx = 0; idx < nbLocalDomain; ++idx) |
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250 | { |
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251 | if (rankOnDomain < globalDomainSize) |
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252 | { |
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253 | int iIdx = rankOnDomain % ni_glo; |
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254 | int jIdx = rankOnDomain / ni_glo; |
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255 | ibegin.setValue(iIdx); jbegin.setValue(jIdx); |
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256 | ni.setValue(1); nj.setValue(1); |
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257 | } |
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258 | else |
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259 | { |
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260 | ibegin.setValue(0); jbegin.setValue(0); |
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261 | ni.setValue(0); nj.setValue(0); |
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262 | } |
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263 | } |
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264 | } |
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265 | else |
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266 | { |
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267 | float njGlo = nj_glo.getValue(); |
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268 | float niGlo = ni_glo.getValue(); |
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269 | int nbProcOnX, nbProcOnY, range; |
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270 | |
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271 | // Compute (approximately) number of segment on x and y axis |
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272 | float yOverXRatio = njGlo/niGlo; |
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273 | |
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274 | nbProcOnX = std::ceil(std::sqrt(nbLocalDomain/yOverXRatio)); |
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275 | nbProcOnY = std::ceil(((float)nbLocalDomain)/nbProcOnX); |
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276 | |
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277 | // Simple distribution: Sweep from top to bottom, left to right |
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278 | // Calculate local begin on x |
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279 | std::vector<int> ibeginVec(nbProcOnX,0), jbeginVec(nbProcOnY,0); |
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280 | std::vector<int> niVec(nbProcOnX), njVec(nbProcOnY); |
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281 | for (int i = 1; i < nbProcOnX; ++i) |
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282 | { |
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283 | range = ni_glo / nbProcOnX; |
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284 | if (i < (ni_glo%nbProcOnX)) ++range; |
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285 | niVec[i-1] = range; |
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286 | ibeginVec[i] = ibeginVec[i-1] + niVec[i-1]; |
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287 | } |
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288 | niVec[nbProcOnX-1] = ni_glo - ibeginVec[nbProcOnX-1]; |
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289 | |
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290 | // Calculate local begin on y |
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291 | for (int j = 1; j < nbProcOnY; ++j) |
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292 | { |
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293 | range = nj_glo / nbProcOnY; |
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294 | if (j < (nj_glo%nbProcOnY)) ++range; |
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295 | njVec[j-1] = range; |
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296 | jbeginVec[j] = jbeginVec[j-1] + njVec[j-1]; |
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297 | } |
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298 | njVec[nbProcOnY-1] = nj_glo - jbeginVec[nbProcOnY-1]; |
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299 | |
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300 | // Now assign value to ni, ibegin, nj, jbegin |
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301 | int iIdx = rankOnDomain % nbProcOnX; |
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302 | int jIdx = rankOnDomain / nbProcOnX; |
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303 | |
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304 | if (rankOnDomain != (nbLocalDomain-1)) |
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305 | { |
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306 | ibegin.setValue(ibeginVec[iIdx]); |
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307 | jbegin.setValue(jbeginVec[jIdx]); |
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308 | nj.setValue(njVec[jIdx]); |
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309 | ni.setValue(niVec[iIdx]); |
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310 | } |
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311 | else // just merge all the remaining rectangle into the last one |
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312 | { |
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313 | ibegin.setValue(ibeginVec[iIdx]); |
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314 | jbegin.setValue(jbeginVec[jIdx]); |
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315 | nj.setValue(njVec[jIdx]); |
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316 | ni.setValue(ni_glo - ibeginVec[iIdx]); |
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317 | } |
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318 | } |
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319 | |
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320 | // Now fill other attributes |
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321 | fillInRectilinearLonLat(); |
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322 | } |
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323 | } |
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324 | |
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325 | /*! |
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326 | Fill in the values for lonvalue_1d and latvalue_1d of rectilinear domain |
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327 | Range of longitude value from 0 - 360 |
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328 | Range of latitude value from -90 - +90 |
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329 | */ |
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330 | void CDomain::fillInRectilinearLonLat() |
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331 | { |
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332 | if (!lonvalue_2d.isEmpty()) lonvalue_2d.free(); |
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333 | if (!latvalue_2d.isEmpty()) latvalue_1d.free(); |
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334 | lonvalue_1d.resize(ni); |
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335 | latvalue_1d.resize(nj); |
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336 | |
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337 | double lonRange = lon_end - lon_start; |
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338 | double latRange = lat_end - lat_start; |
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339 | |
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340 | double lonStep = (1 == ni_glo.getValue()) ? lonRange : lonRange/double(ni_glo.getValue()-1); |
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341 | double latStep = (1 == nj_glo.getValue()) ? latRange : latRange/double(nj_glo.getValue()-1); |
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342 | |
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343 | // Assign lon value |
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344 | for (int i = 0; i < ni; ++i) |
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345 | { |
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346 | if (0 == (ibegin + i)) |
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347 | { |
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348 | lonvalue_1d(i) = lon_start; |
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349 | } |
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350 | else if (ni_glo == (ibegin + i + 1)) |
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351 | { |
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352 | lonvalue_1d(i) = lon_end; |
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353 | } |
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354 | else |
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355 | { |
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356 | lonvalue_1d(i) = (ibegin + i) * lonStep + lon_start; |
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357 | } |
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358 | } |
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359 | |
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360 | for (int j = 0; j < nj; ++j) |
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361 | { |
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362 | if (0 == (jbegin + j)) |
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363 | { |
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364 | latvalue_1d(j) = lat_start; |
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365 | } |
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366 | else if (nj_glo == (jbegin + j + 1)) |
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367 | { |
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368 | latvalue_1d(j) = lat_end; |
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369 | } |
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370 | else |
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371 | { |
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372 | latvalue_1d(j) = (jbegin + j) * latStep + lat_start; |
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373 | } |
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374 | } |
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375 | } |
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376 | |
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377 | void CDomain::fillInRectilinearBoundLonLat(CArray<double,2>& boundsLon, CArray<double,2>& boundsLat, |
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378 | bool isNorthPole, bool isSouthPole) |
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379 | { |
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380 | int i,j,k; |
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381 | const int nvertexValue = 4; |
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382 | |
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383 | double boundsLonRange = bounds_lon_end - bounds_lon_start; |
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384 | double boundsLatRange = bounds_lat_end - bounds_lat_start; |
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385 | |
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386 | boundsLon.resize(nvertexValue,ni*nj); |
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387 | boundsLat.resize(nvertexValue,nj*ni); |
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388 | |
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389 | double lonStep = boundsLonRange/double(ni_glo.getValue()); |
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390 | double latStep = boundsLatRange/double(nj_glo.getValue()); |
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391 | |
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392 | for(j=0;j<nj;++j) |
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393 | for(i=0;i<ni;++i) |
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394 | { |
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395 | k=j*ni+i; |
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396 | boundsLon(0,k) = boundsLon(1,k) = (0 != (ibegin + i)) ? (ibegin + i) * lonStep + bounds_lon_start |
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397 | : bounds_lon_start; |
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398 | boundsLon(2,k) = boundsLon(3,k) = ((ibegin + i + 1) != ni_glo) ? (ibegin + i +1) * lonStep + bounds_lon_start |
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399 | : bounds_lon_end; |
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400 | } |
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401 | |
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402 | double bounds_lat_start_pole = bounds_lat_start; |
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403 | double bounds_lat_end_pole = bounds_lat_end; |
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404 | if (isNorthPole) bounds_lat_start_pole = lat_start; |
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405 | if (isSouthPole) bounds_lat_end_pole = lat_end; |
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406 | |
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407 | for(j=0;j<nj;++j) |
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408 | for(i=0;i<ni;++i) |
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409 | { |
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410 | k=j*ni+i; |
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411 | boundsLat(1,k) = boundsLat(2,k) = (0 != (jbegin + j)) ? (jbegin + j) * latStep + bounds_lat_start |
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412 | : bounds_lat_start_pole; |
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413 | boundsLat(0,k) = boundsLat(3,k) = ((jbegin + j +1) != nj_glo) ? (jbegin + j +1) * latStep + bounds_lat_start |
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414 | : bounds_lat_end_pole; |
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415 | } |
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416 | } |
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417 | |
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418 | /*! |
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419 | Temporary function to verify whether a rectilinear domain is created automatically. |
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420 | The domain is distributed into number of parts which are equal to number of clients (intracomm) |
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421 | */ |
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422 | void CDomain::checkGenerate() |
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423 | { |
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424 | TransMapTypes trans = this->getAllTransformations(); |
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425 | TransMapTypes::const_iterator it = trans.begin(), ite = trans.end(); |
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426 | int transOrder = 0; |
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427 | for (; it != ite; ++it, ++transOrder) |
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428 | { |
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429 | ETranformationType transType = it->first; |
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430 | if ((TRANS_GENERATE_RECTILINEAR_DOMAIN == transType) && (0 == transOrder)) |
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431 | { |
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432 | CContext* context = CContext::getCurrent(); |
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433 | CContextClient* client = context->client; |
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434 | int nbClient; |
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435 | MPI_Comm_size(client->intraComm,&nbClient); |
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436 | it->second->checkValid(this); |
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437 | this->redistribute(nbClient); |
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438 | break; |
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439 | } |
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440 | } |
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441 | } |
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442 | |
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443 | |
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444 | void CDomain::checkDomain(void) |
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445 | { |
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446 | if (type.isEmpty()) |
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447 | { |
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448 | ERROR("CDomain::checkDomain(void)", |
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449 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
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450 | << "The domain type is mandatory, " |
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451 | << "please define the 'type' attribute.") |
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452 | } |
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453 | |
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454 | if (type == type_attr::unstructured) |
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455 | { |
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456 | if (ni_glo.isEmpty()) |
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457 | { |
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458 | ERROR("CDomain::checkDomain(void)", |
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459 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
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460 | << "The global domain is badly defined, " |
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461 | << "the mandatory 'ni_glo' attribute is missing.") |
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462 | } |
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463 | else if (ni_glo <= 0) |
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464 | { |
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465 | ERROR("CDomain::checkDomain(void)", |
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466 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
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467 | << "The global domain is badly defined, " |
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468 | << "'ni_glo' attribute should be strictly positive so 'ni_glo = " << ni_glo.getValue() << "' is invalid.") |
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469 | } |
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470 | isUnstructed_ = true; |
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471 | nj_glo = 1; |
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472 | nj = 1; |
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473 | jbegin = 0; |
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474 | if (ni.isEmpty()) ni = i_index.numElements(); |
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475 | j_index.resize(ni); |
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476 | for(int i=0;i<ni;++i) j_index(i)=0; |
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477 | |
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478 | if (!area.isEmpty()) |
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479 | area.transposeSelf(1, 0); |
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480 | } |
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481 | |
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482 | if (ni_glo.isEmpty()) |
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483 | { |
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484 | ERROR("CDomain::checkDomain(void)", |
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485 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
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486 | << "The global domain is badly defined, " |
---|
487 | << "the mandatory 'ni_glo' attribute is missing.") |
---|
488 | } |
---|
489 | else if (ni_glo <= 0) |
---|
490 | { |
---|
491 | ERROR("CDomain::checkDomain(void)", |
---|
492 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
493 | << "The global domain is badly defined, " |
---|
494 | << "'ni_glo' attribute should be strictly positive so 'ni_glo = " << ni_glo.getValue() << "' is invalid.") |
---|
495 | } |
---|
496 | |
---|
497 | if (nj_glo.isEmpty()) |
---|
498 | { |
---|
499 | ERROR("CDomain::checkDomain(void)", |
---|
500 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
501 | << "The global domain is badly defined, " |
---|
502 | << "the mandatory 'nj_glo' attribute is missing.") |
---|
503 | } |
---|
504 | else if (nj_glo <= 0) |
---|
505 | { |
---|
506 | ERROR("CDomain::checkDomain(void)", |
---|
507 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
508 | << "The global domain is badly defined, " |
---|
509 | << "'nj_glo' attribute should be strictly positive so 'nj_glo = " << nj_glo.getValue() << "' is invalid.") |
---|
510 | } |
---|
511 | |
---|
512 | isDistributed_ = !ibegin.isEmpty() || !ni.isEmpty() || !jbegin.isEmpty() || !nj.isEmpty(); |
---|
513 | |
---|
514 | checkLocalIDomain(); |
---|
515 | checkLocalJDomain(); |
---|
516 | |
---|
517 | if (i_index.isEmpty()) |
---|
518 | { |
---|
519 | i_index.resize(ni*nj); |
---|
520 | for (int j = 0; j < nj; ++j) |
---|
521 | for (int i = 0; i < ni; ++i) i_index(i+j*ni) = i+ibegin; |
---|
522 | } |
---|
523 | |
---|
524 | if (j_index.isEmpty()) |
---|
525 | { |
---|
526 | j_index.resize(ni*nj); |
---|
527 | for (int j = 0; j < nj; ++j) |
---|
528 | for (int i = 0; i < ni; ++i) j_index(i+j*ni) = j+jbegin; |
---|
529 | } |
---|
530 | computeNGlobDomain(); |
---|
531 | |
---|
532 | if (0 == global_zoom_ni) global_zoom_ni = ni_glo; |
---|
533 | if (0 == global_zoom_nj) global_zoom_nj = nj_glo; |
---|
534 | } |
---|
535 | |
---|
536 | //---------------------------------------------------------------- |
---|
537 | |
---|
538 | void CDomain::checkLocalIDomain(void) |
---|
539 | { |
---|
540 | if (ibegin.isEmpty() && ni.isEmpty()) |
---|
541 | { |
---|
542 | ibegin = 0; |
---|
543 | ni = ni_glo; |
---|
544 | } |
---|
545 | else if (!i_index.isEmpty()) |
---|
546 | { |
---|
547 | if (ibegin.isEmpty()) ibegin = i_index(0); |
---|
548 | } |
---|
549 | |
---|
550 | if (ni.getValue() < 0 || ibegin.getValue() < 0 || |
---|
551 | (ibegin.getValue() + ni.getValue()) > ni_glo.getValue()) |
---|
552 | { |
---|
553 | ERROR("CDomain::checkLocalIDomain(void)", |
---|
554 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
555 | << "The local domain is wrongly defined," |
---|
556 | << " check the attributes 'ni_glo' (" << ni_glo.getValue() << "), 'ni' (" << ni.getValue() << ") and 'ibegin' (" << ibegin.getValue() << ")"); |
---|
557 | } |
---|
558 | } |
---|
559 | |
---|
560 | void CDomain::checkLocalJDomain(void) |
---|
561 | { |
---|
562 | if (jbegin.isEmpty() && nj.isEmpty()) |
---|
563 | { |
---|
564 | jbegin = 0; |
---|
565 | nj = nj_glo; |
---|
566 | } |
---|
567 | else if (!j_index.isEmpty()) |
---|
568 | { |
---|
569 | if (jbegin.isEmpty()) jbegin = j_index(0); |
---|
570 | } |
---|
571 | |
---|
572 | if (nj.getValue() < 0 || jbegin.getValue() < 0 || |
---|
573 | (jbegin.getValue() + nj.getValue()) > nj_glo.getValue()) |
---|
574 | { |
---|
575 | ERROR("CDomain::checkLocalJDomain(void)", |
---|
576 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
577 | << "The local domain is wrongly defined," |
---|
578 | << " check the attributes 'nj_glo' (" << nj_glo.getValue() << "), 'nj' (" << nj.getValue() << ") and 'jbegin' (" << jbegin.getValue() << ")"); |
---|
579 | } |
---|
580 | } |
---|
581 | |
---|
582 | //---------------------------------------------------------------- |
---|
583 | |
---|
584 | void CDomain::checkMask(void) |
---|
585 | { |
---|
586 | if (!mask_1d.isEmpty() && !mask_2d.isEmpty()) |
---|
587 | ERROR("CDomain::checkMask(void)", |
---|
588 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
589 | << "Both mask_1d and mask_2d are defined but only one can be used at the same time." << std::endl |
---|
590 | << "Please define only one mask: 'mask_1d' or 'mask_2d'."); |
---|
591 | |
---|
592 | if (!mask_1d.isEmpty() && mask_2d.isEmpty()) |
---|
593 | { |
---|
594 | if (mask_1d.numElements() != i_index.numElements()) |
---|
595 | ERROR("CDomain::checkMask(void)", |
---|
596 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
597 | << "'mask_1d' does not have the same size as the local domain." << std::endl |
---|
598 | << "Local size is " << i_index.numElements() << "." << std::endl |
---|
599 | << "Mask size is " << mask_1d.numElements() << "."); |
---|
600 | } |
---|
601 | |
---|
602 | if (mask_1d.isEmpty() && !mask_2d.isEmpty()) |
---|
603 | { |
---|
604 | if (mask_2d.extent(0) != ni || mask_2d.extent(1) != nj) |
---|
605 | ERROR("CDomain::checkMask(void)", |
---|
606 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
607 | << "The mask does not have the same size as the local domain." << std::endl |
---|
608 | << "Local size is " << ni.getValue() << " x " << nj.getValue() << "." << std::endl |
---|
609 | << "Mask size is " << mask_2d.extent(0) << " x " << mask_2d.extent(1) << "."); |
---|
610 | } |
---|
611 | |
---|
612 | if (!mask_2d.isEmpty()) |
---|
613 | { |
---|
614 | mask_1d.resize(mask_2d.extent(0) * mask_2d.extent(1)); |
---|
615 | for (int j = 0; j < nj; ++j) |
---|
616 | for (int i = 0; i < ni; ++i) mask_1d(i+j*ni) = mask_2d(i,j); |
---|
617 | mask_2d.free(); |
---|
618 | } |
---|
619 | else if (mask_1d.isEmpty()) |
---|
620 | { |
---|
621 | mask_1d.resize(i_index.numElements()); |
---|
622 | for (int i = 0; i < i_index.numElements(); ++i) mask_1d(i) = true; |
---|
623 | } |
---|
624 | } |
---|
625 | |
---|
626 | //---------------------------------------------------------------- |
---|
627 | |
---|
628 | void CDomain::checkDomainData(void) |
---|
629 | { |
---|
630 | if (data_dim.isEmpty()) |
---|
631 | { |
---|
632 | data_dim.setValue(1); |
---|
633 | } |
---|
634 | else if (!(data_dim.getValue() == 1 || data_dim.getValue() == 2)) |
---|
635 | { |
---|
636 | ERROR("CDomain::checkDomainData(void)", |
---|
637 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
638 | << "The data dimension is invalid, 'data_dim' must be 1 or 2 not << " << data_dim.getValue() << "."); |
---|
639 | } |
---|
640 | |
---|
641 | if (data_ibegin.isEmpty()) |
---|
642 | data_ibegin.setValue(0); |
---|
643 | if (data_jbegin.isEmpty()) |
---|
644 | data_jbegin.setValue(0); |
---|
645 | |
---|
646 | if (data_ni.isEmpty()) |
---|
647 | { |
---|
648 | data_ni.setValue((data_dim == 1) ? (ni.getValue() * nj.getValue()) : ni.getValue()); |
---|
649 | } |
---|
650 | else if (data_ni.getValue() < 0) |
---|
651 | { |
---|
652 | ERROR("CDomain::checkDomainData(void)", |
---|
653 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
654 | << "The data size cannot be negative ('data_ni' = " << data_ni.getValue() << ")."); |
---|
655 | } |
---|
656 | |
---|
657 | if (data_nj.isEmpty()) |
---|
658 | { |
---|
659 | data_nj.setValue((data_dim.getValue() == 1) ? (ni.getValue() * nj.getValue()) : nj.getValue()); |
---|
660 | } |
---|
661 | else if (data_nj.getValue() < 0) |
---|
662 | { |
---|
663 | ERROR("CDomain::checkDomainData(void)", |
---|
664 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
665 | << "The data size cannot be negative ('data_nj' = " << data_nj.getValue() << ")."); |
---|
666 | } |
---|
667 | } |
---|
668 | |
---|
669 | //---------------------------------------------------------------- |
---|
670 | |
---|
671 | void CDomain::checkCompression(void) |
---|
672 | { |
---|
673 | if (!data_i_index.isEmpty()) |
---|
674 | { |
---|
675 | if (!data_j_index.isEmpty() && |
---|
676 | data_j_index.numElements() != data_i_index.numElements()) |
---|
677 | { |
---|
678 | ERROR("CDomain::checkCompression(void)", |
---|
679 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
680 | << "'data_i_index' and 'data_j_index' arrays must have the same size." << std::endl |
---|
681 | << "'data_i_index' size = " << data_i_index.numElements() << std::endl |
---|
682 | << "'data_j_index' size = " << data_j_index.numElements()); |
---|
683 | } |
---|
684 | |
---|
685 | if (2 == data_dim) |
---|
686 | { |
---|
687 | if (data_j_index.isEmpty()) |
---|
688 | { |
---|
689 | ERROR("CDomain::checkCompression(void)", |
---|
690 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
691 | << "'data_j_index' must be defined when 'data_i_index' is set and 'data_dim' is 2."); |
---|
692 | } |
---|
693 | } |
---|
694 | else // (1 == data_dim) |
---|
695 | { |
---|
696 | if (data_j_index.isEmpty()) |
---|
697 | { |
---|
698 | data_j_index.resize(data_ni); |
---|
699 | for (int j = 0; j < data_ni; ++j) data_j_index(j) = 0; |
---|
700 | } |
---|
701 | } |
---|
702 | } |
---|
703 | else |
---|
704 | { |
---|
705 | if (data_dim == 2 && !data_j_index.isEmpty()) |
---|
706 | ERROR("CDomain::checkCompression(void)", |
---|
707 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
708 | << "'data_i_index' must be defined when 'data_j_index' is set and 'data_dim' is 2."); |
---|
709 | |
---|
710 | if (1 == data_dim) |
---|
711 | { |
---|
712 | data_i_index.resize(data_ni); |
---|
713 | data_j_index.resize(data_ni); |
---|
714 | |
---|
715 | for (int i = 0; i < data_ni; ++i) |
---|
716 | { |
---|
717 | data_i_index(i) = i; |
---|
718 | data_j_index(i) = 0; |
---|
719 | } |
---|
720 | } |
---|
721 | else // (data_dim == 2) |
---|
722 | { |
---|
723 | const int dsize = data_ni * data_nj; |
---|
724 | data_i_index.resize(dsize); |
---|
725 | data_j_index.resize(dsize); |
---|
726 | |
---|
727 | for(int count = 0, j = 0; j < data_nj; ++j) |
---|
728 | { |
---|
729 | for(int i = 0; i < data_ni; ++i, ++count) |
---|
730 | { |
---|
731 | data_i_index(count) = i; |
---|
732 | data_j_index(count) = j; |
---|
733 | } |
---|
734 | } |
---|
735 | } |
---|
736 | } |
---|
737 | } |
---|
738 | |
---|
739 | //---------------------------------------------------------------- |
---|
740 | |
---|
741 | void CDomain::checkEligibilityForCompressedOutput(void) |
---|
742 | { |
---|
743 | // We don't check if the mask or the indexes are valid here, just if they have been defined at this point. |
---|
744 | isCompressible_ = !mask_1d.isEmpty() || !mask_2d.isEmpty() || !data_i_index.isEmpty(); |
---|
745 | } |
---|
746 | |
---|
747 | //---------------------------------------------------------------- |
---|
748 | |
---|
749 | void CDomain::completeLonLatClient(void) |
---|
750 | { |
---|
751 | if (!lonvalue_2d.isEmpty()) |
---|
752 | { |
---|
753 | lonvalue_client.resize(ni * nj); |
---|
754 | latvalue_client.resize(ni * nj); |
---|
755 | if (hasBounds) |
---|
756 | { |
---|
757 | bounds_lon_client.resize(nvertex, ni * nj); |
---|
758 | bounds_lat_client.resize(nvertex, ni * nj); |
---|
759 | } |
---|
760 | |
---|
761 | for (int j = 0; j < nj; ++j) |
---|
762 | { |
---|
763 | for (int i = 0; i < ni; ++i) |
---|
764 | { |
---|
765 | int k = j * ni + i; |
---|
766 | |
---|
767 | lonvalue_client(k) = lonvalue_2d(i,j); |
---|
768 | latvalue_client(k) = latvalue_2d(i,j); |
---|
769 | |
---|
770 | if (hasBounds) |
---|
771 | { |
---|
772 | for (int n = 0; n < nvertex; ++n) |
---|
773 | { |
---|
774 | bounds_lon_client(n,k) = bounds_lon_2d(n,i,j); |
---|
775 | bounds_lat_client(n,k) = bounds_lat_2d(n,i,j); |
---|
776 | } |
---|
777 | } |
---|
778 | } |
---|
779 | } |
---|
780 | } |
---|
781 | else if (!lonvalue_1d.isEmpty()) |
---|
782 | { |
---|
783 | if (type_attr::rectilinear == type) |
---|
784 | { |
---|
785 | if (ni == lonvalue_1d.numElements() && nj == latvalue_1d.numElements()) |
---|
786 | { |
---|
787 | lonvalue_client.resize(ni * nj); |
---|
788 | latvalue_client.resize(ni * nj); |
---|
789 | if (hasBounds) |
---|
790 | { |
---|
791 | bounds_lon_client.resize(nvertex, ni * nj); |
---|
792 | bounds_lat_client.resize(nvertex, ni * nj); |
---|
793 | } |
---|
794 | |
---|
795 | for (int j = 0; j < nj; ++j) |
---|
796 | { |
---|
797 | for (int i = 0; i < ni; ++i) |
---|
798 | { |
---|
799 | int k = j * ni + i; |
---|
800 | |
---|
801 | lonvalue_client(k) = lonvalue_1d(i); |
---|
802 | latvalue_client(k) = latvalue_1d(j); |
---|
803 | |
---|
804 | if (hasBounds) |
---|
805 | { |
---|
806 | for (int n = 0; n < nvertex; ++n) |
---|
807 | { |
---|
808 | bounds_lon_client(n,k) = bounds_lon_1d(n,i); |
---|
809 | bounds_lat_client(n,k) = bounds_lat_1d(n,j); |
---|
810 | } |
---|
811 | } |
---|
812 | } |
---|
813 | } |
---|
814 | } |
---|
815 | else |
---|
816 | ERROR("CDomain::completeLonClient(void)", |
---|
817 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
818 | << "'lonvalue_1d' and 'latvalue_1d' does not have the same size as the local domain." << std::endl |
---|
819 | << "'lonvalue_1d' size is " << lonvalue_1d.numElements() << " but it should be " << ni.getValue() << '.' << std::endl |
---|
820 | << "'latvalue_1d' size is " << latvalue_1d.numElements() << " but it should be " << nj.getValue() << '.'); |
---|
821 | } |
---|
822 | else if (type == type_attr::curvilinear || type == type_attr::unstructured) |
---|
823 | { |
---|
824 | lonvalue_client.reference(lonvalue_1d); |
---|
825 | latvalue_client.reference(latvalue_1d); |
---|
826 | if (hasBounds) |
---|
827 | { |
---|
828 | bounds_lon_client.reference(bounds_lon_1d); |
---|
829 | bounds_lat_client.reference(bounds_lat_1d); |
---|
830 | } |
---|
831 | } |
---|
832 | } |
---|
833 | } |
---|
834 | |
---|
835 | void CDomain::checkBounds(void) |
---|
836 | { |
---|
837 | if (!nvertex.isEmpty() && nvertex > 0) |
---|
838 | { |
---|
839 | if (!bounds_lon_1d.isEmpty() && !bounds_lon_2d.isEmpty()) |
---|
840 | ERROR("CDomain::checkBounds(void)", |
---|
841 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
842 | << "Only one longitude boundary attribute can be used but both 'bounds_lon_1d' and 'bounds_lon_2d' are defined." << std::endl |
---|
843 | << "Define only one longitude boundary attribute: 'bounds_lon_1d' or 'bounds_lon_2d'."); |
---|
844 | |
---|
845 | if (!bounds_lat_1d.isEmpty() && !bounds_lat_2d.isEmpty()) |
---|
846 | ERROR("CDomain::checkBounds(void)", |
---|
847 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
848 | << "Only one latitude boundary attribute can be used but both 'bounds_lat_1d' and 'bounds_lat_2d' are defined." << std::endl |
---|
849 | << "Define only one latitude boundary attribute: 'bounds_lat_1d' or 'bounds_lat_2d'."); |
---|
850 | |
---|
851 | if ((!bounds_lon_1d.isEmpty() && bounds_lat_1d.isEmpty()) || (bounds_lon_1d.isEmpty() && !bounds_lat_1d.isEmpty())) |
---|
852 | { |
---|
853 | ERROR("CDomain::checkBounds(void)", |
---|
854 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
855 | << "Only 'bounds_lon_1d' or 'bounds_lat_1d' is defined." << std::endl |
---|
856 | << "Please define either both attributes or none."); |
---|
857 | } |
---|
858 | |
---|
859 | if ((!bounds_lon_2d.isEmpty() && bounds_lat_2d.isEmpty()) || (bounds_lon_2d.isEmpty() && !bounds_lat_2d.isEmpty())) |
---|
860 | { |
---|
861 | ERROR("CDomain::checkBounds(void)", |
---|
862 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
863 | << "Only 'bounds_lon_2d' or 'bounds_lat_2d' is defined." << std::endl |
---|
864 | << "Please define either both attributes or none."); |
---|
865 | } |
---|
866 | |
---|
867 | if (!bounds_lon_1d.isEmpty() && nvertex.getValue() != bounds_lon_1d.extent(0)) |
---|
868 | ERROR("CDomain::checkBounds(void)", |
---|
869 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
870 | << "'bounds_lon_1d' dimension is not compatible with 'nvertex'." << std::endl |
---|
871 | << "'bounds_lon_1d' dimension is " << bounds_lon_1d.extent(1) |
---|
872 | << " but nvertex is " << nvertex.getValue() << "."); |
---|
873 | |
---|
874 | if (!bounds_lon_2d.isEmpty() && nvertex.getValue() != bounds_lon_2d.extent(0)) |
---|
875 | ERROR("CDomain::checkBounds(void)", |
---|
876 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
877 | << "'bounds_lon_2d' dimension is not compatible with 'nvertex'." << std::endl |
---|
878 | << "'bounds_lon_2d' dimension is " << bounds_lon_2d.extent(2) |
---|
879 | << " but nvertex is " << nvertex.getValue() << "."); |
---|
880 | |
---|
881 | if (!bounds_lon_1d.isEmpty() && lonvalue_1d.isEmpty()) |
---|
882 | ERROR("CDomain::checkBounds(void)", |
---|
883 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
884 | << "Since 'bounds_lon_1d' is defined, 'lonvalue_1d' must be defined too." << std::endl); |
---|
885 | |
---|
886 | if (!bounds_lon_2d.isEmpty() && lonvalue_2d.isEmpty()) |
---|
887 | ERROR("CDomain::checkBounds(void)", |
---|
888 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
889 | << "Since 'bounds_lon_2d' is defined, 'lonvalue_2d' must be defined too." << std::endl); |
---|
890 | |
---|
891 | if (!bounds_lat_1d.isEmpty() && nvertex.getValue() != bounds_lat_1d.extent(0)) |
---|
892 | ERROR("CDomain::checkBounds(void)", |
---|
893 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
894 | << "'bounds_lat_1d' dimension is not compatible with 'nvertex'." << std::endl |
---|
895 | << "'bounds_lat_1d' dimension is " << bounds_lat_1d.extent(1) |
---|
896 | << " but nvertex is " << nvertex.getValue() << "."); |
---|
897 | |
---|
898 | if (!bounds_lat_2d.isEmpty() && nvertex.getValue() != bounds_lat_2d.extent(0)) |
---|
899 | ERROR("CDomain::checkBounds(void)", |
---|
900 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
901 | << "'bounds_lat_2d' dimension is not compatible with 'nvertex'." << std::endl |
---|
902 | << "'bounds_lat_2d' dimension is " << bounds_lat_2d.extent(2) |
---|
903 | << " but nvertex is " << nvertex.getValue() << "."); |
---|
904 | |
---|
905 | if (!bounds_lat_1d.isEmpty() && latvalue_1d.isEmpty()) |
---|
906 | ERROR("CDomain::checkBounds(void)", |
---|
907 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
908 | << "Since 'bounds_lat_1d' is defined, 'latvalue_1d' must be defined too." << std::endl); |
---|
909 | |
---|
910 | if (!bounds_lat_2d.isEmpty() && latvalue_2d.isEmpty()) |
---|
911 | ERROR("CDomain::checkBounds(void)", |
---|
912 | << "Since 'bounds_lat_2d' is defined, 'latvalue_2d' must be defined too." << std::endl); |
---|
913 | |
---|
914 | hasBounds = true; |
---|
915 | } |
---|
916 | else |
---|
917 | { |
---|
918 | hasBounds = false; |
---|
919 | nvertex = 0; |
---|
920 | } |
---|
921 | } |
---|
922 | |
---|
923 | void CDomain::checkArea(void) |
---|
924 | { |
---|
925 | hasArea = !area.isEmpty(); |
---|
926 | if (hasArea) |
---|
927 | { |
---|
928 | if (area.extent(0) != ni || area.extent(1) != nj) |
---|
929 | { |
---|
930 | ERROR("CDomain::checkArea(void)", |
---|
931 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
932 | << "The area does not have the same size as the local domain." << std::endl |
---|
933 | << "Local size is " << ni.getValue() << " x " << nj.getValue() << "." << std::endl |
---|
934 | << "Area size is " << area.extent(0) << " x " << area.extent(1) << "."); |
---|
935 | } |
---|
936 | } |
---|
937 | } |
---|
938 | |
---|
939 | void CDomain::checkLonLat() |
---|
940 | { |
---|
941 | hasLonLat = (!latvalue_1d.isEmpty() && !lonvalue_1d.isEmpty()) || |
---|
942 | (!latvalue_2d.isEmpty() && !lonvalue_2d.isEmpty()); |
---|
943 | if (hasLonLat) |
---|
944 | { |
---|
945 | if (!lonvalue_1d.isEmpty() && !lonvalue_2d.isEmpty()) |
---|
946 | ERROR("CDomain::completeLonLatClient(void)", |
---|
947 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
948 | << "Only one longitude attribute can be used but both 'lonvalue_1d' and 'lonvalue_2d' are defined." << std::endl |
---|
949 | << "Define only one longitude attribute: 'lonvalue_1d' or 'lonvalue_2d'."); |
---|
950 | |
---|
951 | if (!lonvalue_1d.isEmpty() && lonvalue_2d.isEmpty()) |
---|
952 | { |
---|
953 | if ((type_attr::rectilinear != type) && (lonvalue_1d.numElements() != i_index.numElements())) |
---|
954 | ERROR("CDomain::completeLonLatClient(void)", |
---|
955 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
956 | << "'lonvalue_1d' does not have the same size as the local domain." << std::endl |
---|
957 | << "Local size is " << i_index.numElements() << "." << std::endl |
---|
958 | << "'lonvalue_1d' size is " << lonvalue_1d.numElements() << "."); |
---|
959 | } |
---|
960 | |
---|
961 | if (lonvalue_1d.isEmpty() && !lonvalue_2d.isEmpty()) |
---|
962 | { |
---|
963 | if (lonvalue_2d.extent(0) != ni || lonvalue_2d.extent(1) != nj) |
---|
964 | ERROR("CDomain::completeLonLatClient(void)", |
---|
965 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
966 | << "'lonvalue_2d' does not have the same size as the local domain." << std::endl |
---|
967 | << "Local size is " << ni.getValue() << " x " << nj.getValue() << "." << std::endl |
---|
968 | << "'lonvalue_2d' size is " << lonvalue_2d.extent(0) << " x " << lonvalue_2d.extent(1) << "."); |
---|
969 | } |
---|
970 | |
---|
971 | if (!latvalue_1d.isEmpty() && !latvalue_2d.isEmpty()) |
---|
972 | ERROR("CDomain::completeLonLatClient(void)", |
---|
973 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
974 | << "Only one latitude attribute can be used but both 'latvalue_1d' and 'latvalue_2d' are defined." << std::endl |
---|
975 | << "Define only one latitude attribute: 'latvalue_1d' or 'latvalue_2d'."); |
---|
976 | |
---|
977 | if (!latvalue_1d.isEmpty() && latvalue_2d.isEmpty()) |
---|
978 | { |
---|
979 | if ((type_attr::rectilinear != type) && (latvalue_1d.numElements() != i_index.numElements())) |
---|
980 | ERROR("CDomain::completeLonLatClient(void)", |
---|
981 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
982 | << "'latvalue_1d' does not have the same size as the local domain." << std::endl |
---|
983 | << "Local size is " << i_index.numElements() << "." << std::endl |
---|
984 | << "'latvalue_1d' size is " << latvalue_1d.numElements() << "."); |
---|
985 | } |
---|
986 | |
---|
987 | if (latvalue_1d.isEmpty() && !latvalue_2d.isEmpty()) |
---|
988 | { |
---|
989 | if (latvalue_2d.extent(0) != ni || latvalue_2d.extent(1) != nj) |
---|
990 | ERROR("CDomain::completeLonLatClient(void)", |
---|
991 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
992 | << "'latvalue_2d' does not have the same size as the local domain." << std::endl |
---|
993 | << "Local size is " << ni.getValue() << " x " << nj.getValue() << "." << std::endl |
---|
994 | << "'latvalue_2d' size is " << latvalue_2d.extent(0) << " x " << latvalue_2d.extent(1) << "."); |
---|
995 | } |
---|
996 | } |
---|
997 | } |
---|
998 | |
---|
999 | void CDomain::checkAttributesOnClientAfterTransformation() |
---|
1000 | { |
---|
1001 | CContext* context=CContext::getCurrent() ; |
---|
1002 | |
---|
1003 | if (this->isClientAfterTransformationChecked) return; |
---|
1004 | if (context->hasClient) |
---|
1005 | { |
---|
1006 | this->checkMask(); |
---|
1007 | if (hasLonLat || hasArea || isCompressible_) this->computeConnectedServer(); |
---|
1008 | if (hasLonLat) this->completeLonLatClient(); |
---|
1009 | } |
---|
1010 | |
---|
1011 | this->isClientAfterTransformationChecked = true; |
---|
1012 | } |
---|
1013 | |
---|
1014 | //---------------------------------------------------------------- |
---|
1015 | // Divide function checkAttributes into 2 seperate ones |
---|
1016 | // This function only checks all attributes of current domain |
---|
1017 | void CDomain::checkAttributesOnClient() |
---|
1018 | { |
---|
1019 | if (this->isClientChecked) return; |
---|
1020 | CContext* context=CContext::getCurrent(); |
---|
1021 | |
---|
1022 | this->checkGenerate(); |
---|
1023 | this->checkDomain(); |
---|
1024 | this->checkBounds(); |
---|
1025 | this->checkArea(); |
---|
1026 | this->checkLonLat(); |
---|
1027 | |
---|
1028 | if (context->hasClient) |
---|
1029 | { // CÎté client uniquement |
---|
1030 | this->checkMask(); |
---|
1031 | this->checkDomainData(); |
---|
1032 | this->checkCompression(); |
---|
1033 | } |
---|
1034 | else |
---|
1035 | { // CÎté serveur uniquement |
---|
1036 | } |
---|
1037 | |
---|
1038 | this->isClientChecked = true; |
---|
1039 | } |
---|
1040 | |
---|
1041 | // Send all checked attributes to server |
---|
1042 | void CDomain::sendCheckedAttributes() |
---|
1043 | { |
---|
1044 | if (!this->isClientChecked) checkAttributesOnClient(); |
---|
1045 | if (!this->isClientAfterTransformationChecked) checkAttributesOnClientAfterTransformation(); |
---|
1046 | CContext* context=CContext::getCurrent() ; |
---|
1047 | |
---|
1048 | if (this->isChecked) return; |
---|
1049 | if (context->hasClient) |
---|
1050 | { |
---|
1051 | sendServerAttribut(); |
---|
1052 | if (hasLonLat || hasArea || isCompressible_) sendLonLatArea(); |
---|
1053 | } |
---|
1054 | this->isChecked = true; |
---|
1055 | } |
---|
1056 | |
---|
1057 | void CDomain::checkAttributes(void) |
---|
1058 | { |
---|
1059 | if (this->isChecked) return; |
---|
1060 | CContext* context=CContext::getCurrent() ; |
---|
1061 | |
---|
1062 | this->checkDomain(); |
---|
1063 | this->checkLonLat(); |
---|
1064 | this->checkBounds(); |
---|
1065 | this->checkArea(); |
---|
1066 | |
---|
1067 | if (context->hasClient) |
---|
1068 | { // CÎté client uniquement |
---|
1069 | this->checkMask(); |
---|
1070 | this->checkDomainData(); |
---|
1071 | this->checkCompression(); |
---|
1072 | |
---|
1073 | } |
---|
1074 | else |
---|
1075 | { // CÎté serveur uniquement |
---|
1076 | } |
---|
1077 | |
---|
1078 | if (context->hasClient) |
---|
1079 | { |
---|
1080 | this->computeConnectedServer(); |
---|
1081 | this->completeLonLatClient(); |
---|
1082 | this->sendServerAttribut(); |
---|
1083 | this->sendLonLatArea(); |
---|
1084 | } |
---|
1085 | |
---|
1086 | this->isChecked = true; |
---|
1087 | } |
---|
1088 | |
---|
1089 | void CDomain::sendServerAttribut(void) |
---|
1090 | { |
---|
1091 | CServerDistributionDescription serverDescription(nGlobDomain_); |
---|
1092 | |
---|
1093 | CContext* context = CContext::getCurrent(); |
---|
1094 | CContextClient* client = context->client; |
---|
1095 | int nbServer = client->serverSize; |
---|
1096 | |
---|
1097 | if (isUnstructed_) serverDescription.computeServerDistribution(nbServer,0); |
---|
1098 | else serverDescription.computeServerDistribution(nbServer,1); |
---|
1099 | |
---|
1100 | std::vector<std::vector<int> > serverIndexBegin = serverDescription.getServerIndexBegin(); |
---|
1101 | std::vector<std::vector<int> > serverDimensionSizes = serverDescription.getServerDimensionSizes(); |
---|
1102 | |
---|
1103 | CEventClient event(getType(),EVENT_ID_SERVER_ATTRIBUT); |
---|
1104 | if (client->isServerLeader()) |
---|
1105 | { |
---|
1106 | std::list<CMessage> msgs; |
---|
1107 | |
---|
1108 | const std::list<int>& ranks = client->getRanksServerLeader(); |
---|
1109 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
1110 | { |
---|
1111 | // Use const int to ensure CMessage holds a copy of the value instead of just a reference |
---|
1112 | const int ibegin_srv = serverIndexBegin[*itRank][0]; |
---|
1113 | const int jbegin_srv = serverIndexBegin[*itRank][1]; |
---|
1114 | const int ni_srv = serverDimensionSizes[*itRank][0]; |
---|
1115 | const int nj_srv = serverDimensionSizes[*itRank][1]; |
---|
1116 | const int iend_srv = ibegin_srv + ni_srv - 1; |
---|
1117 | const int jend_srv = jbegin_srv + nj_srv - 1; |
---|
1118 | |
---|
1119 | msgs.push_back(CMessage()); |
---|
1120 | CMessage& msg = msgs.back(); |
---|
1121 | msg << this->getId() ; |
---|
1122 | msg << ni_srv << ibegin_srv << iend_srv << nj_srv << jbegin_srv << jend_srv; |
---|
1123 | msg << global_zoom_ni << global_zoom_ibegin << global_zoom_nj << global_zoom_jbegin; |
---|
1124 | msg << isCompressible_; |
---|
1125 | |
---|
1126 | event.push(*itRank,1,msg); |
---|
1127 | } |
---|
1128 | client->sendEvent(event); |
---|
1129 | } |
---|
1130 | else client->sendEvent(event); |
---|
1131 | } |
---|
1132 | |
---|
1133 | void CDomain::computeNGlobDomain() |
---|
1134 | { |
---|
1135 | nGlobDomain_.resize(2); |
---|
1136 | nGlobDomain_[0] = ni_glo.getValue(); |
---|
1137 | nGlobDomain_[1] = nj_glo.getValue(); |
---|
1138 | } |
---|
1139 | |
---|
1140 | void CDomain::computeConnectedServer(void) |
---|
1141 | { |
---|
1142 | CContext* context=CContext::getCurrent() ; |
---|
1143 | CContextClient* client=context->client ; |
---|
1144 | int nbServer=client->serverSize; |
---|
1145 | bool doComputeGlobalIndexServer = true; |
---|
1146 | |
---|
1147 | int i,j,i_ind,j_ind, nbIndex; |
---|
1148 | int global_zoom_iend=global_zoom_ibegin+global_zoom_ni-1 ; |
---|
1149 | int global_zoom_jend=global_zoom_jbegin+global_zoom_nj-1 ; |
---|
1150 | |
---|
1151 | // Precompute number of index |
---|
1152 | int globalIndexCountZoom = 0; |
---|
1153 | nbIndex = i_index.numElements(); |
---|
1154 | for (i = 0; i < nbIndex; ++i) |
---|
1155 | { |
---|
1156 | i_ind=i_index(i); |
---|
1157 | j_ind=j_index(i); |
---|
1158 | |
---|
1159 | if (i_ind >= global_zoom_ibegin && i_ind <= global_zoom_iend && j_ind >= global_zoom_jbegin && j_ind <= global_zoom_jend) |
---|
1160 | { |
---|
1161 | ++globalIndexCountZoom; |
---|
1162 | } |
---|
1163 | } |
---|
1164 | |
---|
1165 | int globalIndexWrittenCount = 0; |
---|
1166 | if (isCompressible_) |
---|
1167 | { |
---|
1168 | for (i = 0; i < data_i_index.numElements(); ++i) |
---|
1169 | { |
---|
1170 | i_ind = CDistributionClient::getDomainIndex(data_i_index(i), data_j_index(i), |
---|
1171 | data_ibegin, data_jbegin, data_dim, ni, |
---|
1172 | j_ind); |
---|
1173 | if (i_ind >= 0 && i_ind < ni && j_ind >= 0 && j_ind < nj && mask_1d(i_ind + j_ind * ni)) |
---|
1174 | { |
---|
1175 | i_ind += ibegin; |
---|
1176 | j_ind += jbegin; |
---|
1177 | if (i_ind >= global_zoom_ibegin && i_ind <= global_zoom_iend && j_ind >= global_zoom_jbegin && j_ind <= global_zoom_jend) |
---|
1178 | ++globalIndexWrittenCount; |
---|
1179 | } |
---|
1180 | } |
---|
1181 | } |
---|
1182 | |
---|
1183 | // Fill in index |
---|
1184 | CArray<size_t,1> globalIndexDomainZoom(globalIndexCountZoom); |
---|
1185 | CArray<size_t,1> localIndexDomainZoom(globalIndexCountZoom); |
---|
1186 | CArray<size_t,1> globalIndexDomain(nbIndex); |
---|
1187 | size_t globalIndex; |
---|
1188 | int globalIndexCount = 0; |
---|
1189 | globalIndexCountZoom = 0; |
---|
1190 | |
---|
1191 | for (i = 0; i < nbIndex; ++i) |
---|
1192 | { |
---|
1193 | i_ind=i_index(i); |
---|
1194 | j_ind=j_index(i); |
---|
1195 | globalIndex = i_ind + j_ind * ni_glo; |
---|
1196 | globalIndexDomain(globalIndexCount) = globalIndex; |
---|
1197 | ++globalIndexCount; |
---|
1198 | if (i_ind >= global_zoom_ibegin && i_ind <= global_zoom_iend && j_ind >= global_zoom_jbegin && j_ind <= global_zoom_jend) |
---|
1199 | { |
---|
1200 | globalIndexDomainZoom(globalIndexCountZoom) = globalIndex; |
---|
1201 | localIndexDomainZoom(globalIndexCountZoom) = i; |
---|
1202 | ++globalIndexCountZoom; |
---|
1203 | } |
---|
1204 | } |
---|
1205 | |
---|
1206 | CArray<int,1> globalIndexWrittenDomain(globalIndexWrittenCount); |
---|
1207 | if (isCompressible_) |
---|
1208 | { |
---|
1209 | globalIndexWrittenCount = 0; |
---|
1210 | for (i = 0; i < data_i_index.numElements(); ++i) |
---|
1211 | { |
---|
1212 | i_ind = CDistributionClient::getDomainIndex(data_i_index(i), data_j_index(i), |
---|
1213 | data_ibegin, data_jbegin, data_dim, ni, |
---|
1214 | j_ind); |
---|
1215 | if (i_ind >= 0 && i_ind < ni && j_ind >= 0 && j_ind < nj && mask_1d(i_ind + j_ind * ni)) |
---|
1216 | { |
---|
1217 | i_ind += ibegin; |
---|
1218 | j_ind += jbegin; |
---|
1219 | if (i_ind >= global_zoom_ibegin && i_ind <= global_zoom_iend && j_ind >= global_zoom_jbegin && j_ind <= global_zoom_jend) |
---|
1220 | { |
---|
1221 | globalIndexWrittenDomain(globalIndexWrittenCount) = i_ind + j_ind * ni_glo; |
---|
1222 | ++globalIndexWrittenCount; |
---|
1223 | } |
---|
1224 | } |
---|
1225 | } |
---|
1226 | } |
---|
1227 | |
---|
1228 | size_t globalSizeIndex = 1, indexBegin, indexEnd; |
---|
1229 | int range, clientSize = client->clientSize; |
---|
1230 | for (int i = 0; i < nGlobDomain_.size(); ++i) globalSizeIndex *= nGlobDomain_[i]; |
---|
1231 | indexBegin = 0; |
---|
1232 | for (int i = 0; i < clientSize; ++i) |
---|
1233 | { |
---|
1234 | range = globalSizeIndex / clientSize; |
---|
1235 | if (i < (globalSizeIndex%clientSize)) ++range; |
---|
1236 | if (i == client->clientRank) break; |
---|
1237 | indexBegin += range; |
---|
1238 | } |
---|
1239 | indexEnd = indexBegin + range - 1; |
---|
1240 | |
---|
1241 | CServerDistributionDescription serverDescription(nGlobDomain_); |
---|
1242 | if (isUnstructed_) serverDescription.computeServerGlobalIndexInRange(nbServer, std::make_pair<size_t,size_t>(indexBegin, indexEnd), 0); |
---|
1243 | else serverDescription.computeServerGlobalIndexInRange(nbServer, std::make_pair<size_t,size_t>(indexBegin, indexEnd), 1); |
---|
1244 | |
---|
1245 | CClientServerMapping* clientServerMap = new CClientServerMappingDistributed(serverDescription.getGlobalIndexRange(), |
---|
1246 | client->intraComm); |
---|
1247 | clientServerMap->computeServerIndexMapping(globalIndexDomain); |
---|
1248 | const std::map<int, std::vector<size_t> >& globalIndexDomainOnServer = clientServerMap->getGlobalIndexOnServer(); |
---|
1249 | |
---|
1250 | std::map<int, std::vector<size_t> >::const_iterator it = globalIndexDomainOnServer.begin(), |
---|
1251 | ite = globalIndexDomainOnServer.end(); |
---|
1252 | typedef XIOSBinarySearchWithIndex<size_t> BinarySearch; |
---|
1253 | std::vector<int>::iterator itVec; |
---|
1254 | |
---|
1255 | indSrv_.clear(); |
---|
1256 | indWrittenSrv_.clear(); |
---|
1257 | for (; it != ite; ++it) |
---|
1258 | { |
---|
1259 | int rank = it->first; |
---|
1260 | int indexSize = it->second.size(); |
---|
1261 | std::vector<int> permutIndex(indexSize); |
---|
1262 | XIOSAlgorithms::fillInIndex(indexSize, permutIndex); |
---|
1263 | XIOSAlgorithms::sortWithIndex<size_t, CVectorStorage>(it->second, permutIndex); |
---|
1264 | BinarySearch binSearch(it->second); |
---|
1265 | int nb = globalIndexDomainZoom.numElements(); |
---|
1266 | for (int i = 0; i < nb; ++i) |
---|
1267 | { |
---|
1268 | if (binSearch.search(permutIndex.begin(), permutIndex.end(), globalIndexDomainZoom(i), itVec)) |
---|
1269 | { |
---|
1270 | indSrv_[rank].push_back(localIndexDomainZoom(i)); |
---|
1271 | } |
---|
1272 | } |
---|
1273 | for (int i = 0; i < globalIndexWrittenDomain.numElements(); ++i) |
---|
1274 | { |
---|
1275 | if (binSearch.search(permutIndex.begin(), permutIndex.end(), globalIndexWrittenDomain(i), itVec)) |
---|
1276 | { |
---|
1277 | indWrittenSrv_[rank].push_back(globalIndexWrittenDomain(i)); |
---|
1278 | } |
---|
1279 | } |
---|
1280 | } |
---|
1281 | |
---|
1282 | connectedServerRank_.clear(); |
---|
1283 | for (it = globalIndexDomainOnServer.begin(); it != ite; ++it) { |
---|
1284 | connectedServerRank_.push_back(it->first); |
---|
1285 | } |
---|
1286 | |
---|
1287 | if (!indSrv_.empty()) |
---|
1288 | { |
---|
1289 | connectedServerRank_.clear(); |
---|
1290 | for (it = indSrv_.begin(); it != indSrv_.end(); ++it) |
---|
1291 | connectedServerRank_.push_back(it->first); |
---|
1292 | } |
---|
1293 | nbConnectedClients_ = clientServerMap->computeConnectedClients(client->serverSize, client->clientSize, client->intraComm, connectedServerRank_); |
---|
1294 | |
---|
1295 | delete clientServerMap; |
---|
1296 | } |
---|
1297 | |
---|
1298 | const std::map<int, vector<size_t> >& CDomain::getIndexServer() const |
---|
1299 | { |
---|
1300 | return indSrv_; |
---|
1301 | } |
---|
1302 | |
---|
1303 | /*! |
---|
1304 | Send index from client to server(s) |
---|
1305 | */ |
---|
1306 | void CDomain::sendIndex() |
---|
1307 | { |
---|
1308 | int ns, n, i, j, ind, nv, idx; |
---|
1309 | CContext* context = CContext::getCurrent(); |
---|
1310 | CContextClient* client=context->client; |
---|
1311 | |
---|
1312 | CEventClient eventIndex(getType(), EVENT_ID_INDEX); |
---|
1313 | |
---|
1314 | list<CMessage> list_msgsIndex; |
---|
1315 | list<CArray<int,1> > list_indi, list_indj, list_writtenInd; |
---|
1316 | |
---|
1317 | std::map<int, std::vector<size_t> >::const_iterator it, iteMap; |
---|
1318 | iteMap = indSrv_.end(); |
---|
1319 | for (int k = 0; k < connectedServerRank_.size(); ++k) |
---|
1320 | { |
---|
1321 | int nbData = 0; |
---|
1322 | int rank = connectedServerRank_[k]; |
---|
1323 | it = indSrv_.find(rank); |
---|
1324 | if (iteMap != it) |
---|
1325 | nbData = it->second.size(); |
---|
1326 | |
---|
1327 | list_indi.push_back(CArray<int,1>(nbData)); |
---|
1328 | list_indj.push_back(CArray<int,1>(nbData)); |
---|
1329 | |
---|
1330 | CArray<int,1>& indi = list_indi.back(); |
---|
1331 | CArray<int,1>& indj = list_indj.back(); |
---|
1332 | const std::vector<size_t>& temp = it->second; |
---|
1333 | for (n = 0; n < nbData; ++n) |
---|
1334 | { |
---|
1335 | idx = static_cast<int>(it->second[n]); |
---|
1336 | indi(n) = i_index(idx); |
---|
1337 | indj(n) = j_index(idx); |
---|
1338 | } |
---|
1339 | |
---|
1340 | list_msgsIndex.push_back(CMessage()); |
---|
1341 | |
---|
1342 | list_msgsIndex.back() << this->getId() << (int)type; // enum ne fonctionne pour les message => ToFix |
---|
1343 | list_msgsIndex.back() << isCurvilinear; |
---|
1344 | list_msgsIndex.back() << list_indi.back() << list_indj.back(); |
---|
1345 | |
---|
1346 | if (isCompressible_) |
---|
1347 | { |
---|
1348 | std::vector<int>& writtenIndSrc = indWrittenSrv_[rank]; |
---|
1349 | list_writtenInd.push_back(CArray<int,1>(writtenIndSrc.size())); |
---|
1350 | CArray<int,1>& writtenInd = list_writtenInd.back(); |
---|
1351 | |
---|
1352 | for (n = 0; n < writtenInd.numElements(); ++n) |
---|
1353 | writtenInd(n) = writtenIndSrc[n]; |
---|
1354 | |
---|
1355 | list_msgsIndex.back() << writtenInd; |
---|
1356 | } |
---|
1357 | |
---|
1358 | eventIndex.push(rank, nbConnectedClients_[rank], list_msgsIndex.back()); |
---|
1359 | } |
---|
1360 | |
---|
1361 | client->sendEvent(eventIndex); |
---|
1362 | } |
---|
1363 | |
---|
1364 | /*! |
---|
1365 | Send area from client to server(s) |
---|
1366 | */ |
---|
1367 | void CDomain::sendArea() |
---|
1368 | { |
---|
1369 | if (!hasArea) return; |
---|
1370 | |
---|
1371 | int ns, n, i, j, ind, nv, idx; |
---|
1372 | CContext* context = CContext::getCurrent(); |
---|
1373 | CContextClient* client=context->client; |
---|
1374 | |
---|
1375 | // send area for each connected server |
---|
1376 | CEventClient eventArea(getType(), EVENT_ID_AREA); |
---|
1377 | |
---|
1378 | list<CMessage> list_msgsArea; |
---|
1379 | list<CArray<double,1> > list_area; |
---|
1380 | |
---|
1381 | std::map<int, std::vector<size_t> >::const_iterator it, iteMap; |
---|
1382 | iteMap = indSrv_.end(); |
---|
1383 | for (int k = 0; k < connectedServerRank_.size(); ++k) |
---|
1384 | { |
---|
1385 | int nbData = 0; |
---|
1386 | int rank = connectedServerRank_[k]; |
---|
1387 | it = indSrv_.find(rank); |
---|
1388 | if (iteMap != it) |
---|
1389 | nbData = it->second.size(); |
---|
1390 | list_area.push_back(CArray<double,1>(nbData)); |
---|
1391 | |
---|
1392 | const std::vector<size_t>& temp = it->second; |
---|
1393 | for (n = 0; n < nbData; ++n) |
---|
1394 | { |
---|
1395 | idx = static_cast<int>(it->second[n]); |
---|
1396 | i = i_index(idx); |
---|
1397 | j = j_index(idx); |
---|
1398 | if (hasArea) |
---|
1399 | list_area.back()(n) = area(i - ibegin, j - jbegin); |
---|
1400 | } |
---|
1401 | |
---|
1402 | list_msgsArea.push_back(CMessage()); |
---|
1403 | list_msgsArea.back() << this->getId() << list_area.back(); |
---|
1404 | eventArea.push(rank, nbConnectedClients_[rank], list_msgsArea.back()); |
---|
1405 | } |
---|
1406 | client->sendEvent(eventArea); |
---|
1407 | } |
---|
1408 | |
---|
1409 | /*! |
---|
1410 | Send longitude and latitude from client to servers |
---|
1411 | Each client send long and lat information to corresponding connected server(s). |
---|
1412 | Because longitude and latitude are optional, this function only called if latitude and longitude exist |
---|
1413 | */ |
---|
1414 | void CDomain::sendLonLat() |
---|
1415 | { |
---|
1416 | if (!hasLonLat) return; |
---|
1417 | |
---|
1418 | int ns, n, i, j, ind, nv, idx; |
---|
1419 | CContext* context = CContext::getCurrent(); |
---|
1420 | CContextClient* client=context->client; |
---|
1421 | |
---|
1422 | // send lon lat for each connected server |
---|
1423 | CEventClient eventLon(getType(), EVENT_ID_LON); |
---|
1424 | CEventClient eventLat(getType(), EVENT_ID_LAT); |
---|
1425 | |
---|
1426 | list<CMessage> list_msgsLon, list_msgsLat; |
---|
1427 | list<CArray<double,1> > list_lon, list_lat; |
---|
1428 | list<CArray<double,2> > list_boundslon, list_boundslat; |
---|
1429 | |
---|
1430 | std::map<int, std::vector<size_t> >::const_iterator it, iteMap; |
---|
1431 | iteMap = indSrv_.end(); |
---|
1432 | for (int k = 0; k < connectedServerRank_.size(); ++k) |
---|
1433 | { |
---|
1434 | int nbData = 0; |
---|
1435 | int rank = connectedServerRank_[k]; |
---|
1436 | it = indSrv_.find(rank); |
---|
1437 | if (iteMap != it) |
---|
1438 | nbData = it->second.size(); |
---|
1439 | |
---|
1440 | list_lon.push_back(CArray<double,1>(nbData)); |
---|
1441 | list_lat.push_back(CArray<double,1>(nbData)); |
---|
1442 | |
---|
1443 | if (hasBounds) |
---|
1444 | { |
---|
1445 | list_boundslon.push_back(CArray<double,2>(nvertex, nbData)); |
---|
1446 | list_boundslat.push_back(CArray<double,2>(nvertex, nbData)); |
---|
1447 | } |
---|
1448 | |
---|
1449 | CArray<double,1>& lon = list_lon.back(); |
---|
1450 | CArray<double,1>& lat = list_lat.back(); |
---|
1451 | const std::vector<size_t>& temp = it->second; |
---|
1452 | for (n = 0; n < nbData; ++n) |
---|
1453 | { |
---|
1454 | idx = static_cast<int>(it->second[n]); |
---|
1455 | lon(n) = lonvalue_client(idx); |
---|
1456 | lat(n) = latvalue_client(idx); |
---|
1457 | |
---|
1458 | if (hasBounds) |
---|
1459 | { |
---|
1460 | CArray<double,2>& boundslon = list_boundslon.back(); |
---|
1461 | CArray<double,2>& boundslat = list_boundslat.back(); |
---|
1462 | |
---|
1463 | for (nv = 0; nv < nvertex; ++nv) |
---|
1464 | { |
---|
1465 | boundslon(nv, n) = bounds_lon_client(nv, idx); |
---|
1466 | boundslat(nv, n) = bounds_lat_client(nv, idx); |
---|
1467 | } |
---|
1468 | } |
---|
1469 | } |
---|
1470 | |
---|
1471 | list_msgsLon.push_back(CMessage()); |
---|
1472 | list_msgsLat.push_back(CMessage()); |
---|
1473 | |
---|
1474 | list_msgsLon.back() << this->getId() << list_lon.back(); |
---|
1475 | list_msgsLat.back() << this->getId() << list_lat.back(); |
---|
1476 | |
---|
1477 | if (hasBounds) |
---|
1478 | { |
---|
1479 | list_msgsLon.back() << list_boundslon.back(); |
---|
1480 | list_msgsLat.back() << list_boundslat.back(); |
---|
1481 | } |
---|
1482 | |
---|
1483 | eventLon.push(rank, nbConnectedClients_[rank], list_msgsLon.back()); |
---|
1484 | eventLat.push(rank, nbConnectedClients_[rank], list_msgsLat.back()); |
---|
1485 | } |
---|
1486 | |
---|
1487 | client->sendEvent(eventLon); |
---|
1488 | client->sendEvent(eventLat); |
---|
1489 | } |
---|
1490 | |
---|
1491 | /*! |
---|
1492 | Send some optional information to server(s) |
---|
1493 | In the future, this function can be extended with more optional information to send |
---|
1494 | */ |
---|
1495 | void CDomain::sendLonLatArea(void) |
---|
1496 | { |
---|
1497 | sendIndex(); |
---|
1498 | sendLonLat(); |
---|
1499 | sendArea(); |
---|
1500 | } |
---|
1501 | |
---|
1502 | bool CDomain::dispatchEvent(CEventServer& event) |
---|
1503 | { |
---|
1504 | if (SuperClass::dispatchEvent(event)) return true; |
---|
1505 | else |
---|
1506 | { |
---|
1507 | switch(event.type) |
---|
1508 | { |
---|
1509 | case EVENT_ID_SERVER_ATTRIBUT: |
---|
1510 | recvServerAttribut(event); |
---|
1511 | return true; |
---|
1512 | break; |
---|
1513 | case EVENT_ID_INDEX: |
---|
1514 | recvIndex(event); |
---|
1515 | return true; |
---|
1516 | break; |
---|
1517 | case EVENT_ID_LON: |
---|
1518 | recvLon(event); |
---|
1519 | return true; |
---|
1520 | break; |
---|
1521 | case EVENT_ID_LAT: |
---|
1522 | recvLat(event); |
---|
1523 | return true; |
---|
1524 | break; |
---|
1525 | case EVENT_ID_AREA: |
---|
1526 | recvArea(event); |
---|
1527 | return true; |
---|
1528 | break; |
---|
1529 | default: |
---|
1530 | ERROR("bool CContext::dispatchEvent(CEventServer& event)", |
---|
1531 | << "Unknown Event"); |
---|
1532 | return false; |
---|
1533 | } |
---|
1534 | } |
---|
1535 | } |
---|
1536 | |
---|
1537 | /*! |
---|
1538 | Receive attributes event from clients(s) |
---|
1539 | \param[in] event event contain info about rank and associated attributes |
---|
1540 | */ |
---|
1541 | void CDomain::recvServerAttribut(CEventServer& event) |
---|
1542 | { |
---|
1543 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
1544 | string domainId ; |
---|
1545 | *buffer>>domainId ; |
---|
1546 | get(domainId)->recvServerAttribut(*buffer) ; |
---|
1547 | } |
---|
1548 | |
---|
1549 | /*! |
---|
1550 | Receive attributes from client(s): zoom info and begin and n of each server |
---|
1551 | \param[in] rank rank of client source |
---|
1552 | \param[in] buffer message containing attributes info |
---|
1553 | */ |
---|
1554 | void CDomain::recvServerAttribut(CBufferIn& buffer) |
---|
1555 | { |
---|
1556 | buffer >> ni_srv >> ibegin_srv >> iend_srv >> nj_srv >> jbegin_srv >> jend_srv |
---|
1557 | >> global_zoom_ni >> global_zoom_ibegin >> global_zoom_nj >> global_zoom_jbegin |
---|
1558 | >> isCompressible_; |
---|
1559 | |
---|
1560 | int zoom_iend = global_zoom_ibegin + global_zoom_ni - 1; |
---|
1561 | int zoom_jend = global_zoom_jbegin + global_zoom_nj - 1; |
---|
1562 | |
---|
1563 | zoom_ibegin_srv = global_zoom_ibegin > ibegin_srv ? global_zoom_ibegin : ibegin_srv ; |
---|
1564 | zoom_iend_srv = zoom_iend < iend_srv ? zoom_iend : iend_srv ; |
---|
1565 | zoom_ni_srv=zoom_iend_srv-zoom_ibegin_srv+1 ; |
---|
1566 | |
---|
1567 | zoom_jbegin_srv = global_zoom_jbegin > jbegin_srv ? global_zoom_jbegin : jbegin_srv ; |
---|
1568 | zoom_jend_srv = zoom_jend < jend_srv ? zoom_jend : jend_srv ; |
---|
1569 | zoom_nj_srv=zoom_jend_srv-zoom_jbegin_srv+1 ; |
---|
1570 | |
---|
1571 | if (zoom_ni_srv<=0 || zoom_nj_srv<=0) |
---|
1572 | { |
---|
1573 | zoom_ibegin_srv=0 ; zoom_iend_srv=0 ; zoom_ni_srv=0 ; |
---|
1574 | zoom_jbegin_srv=0 ; zoom_jend_srv=0 ; zoom_nj_srv=0 ; |
---|
1575 | } |
---|
1576 | lonvalue_srv.resize(zoom_ni_srv*zoom_nj_srv) ; |
---|
1577 | lonvalue_srv = 0. ; |
---|
1578 | latvalue_srv.resize(zoom_ni_srv*zoom_nj_srv) ; |
---|
1579 | latvalue_srv = 0. ; |
---|
1580 | if (hasBounds) |
---|
1581 | { |
---|
1582 | bounds_lon_srv.resize(nvertex,zoom_ni_srv*zoom_nj_srv) ; |
---|
1583 | bounds_lon_srv = 0. ; |
---|
1584 | bounds_lat_srv.resize(nvertex,zoom_ni_srv*zoom_nj_srv) ; |
---|
1585 | bounds_lat_srv = 0. ; |
---|
1586 | } |
---|
1587 | |
---|
1588 | if (hasArea) |
---|
1589 | area_srv.resize(zoom_ni_srv * zoom_nj_srv); |
---|
1590 | } |
---|
1591 | |
---|
1592 | /*! |
---|
1593 | Receive index event from clients(s) |
---|
1594 | \param[in] event event contain info about rank and associated index |
---|
1595 | */ |
---|
1596 | void CDomain::recvIndex(CEventServer& event) |
---|
1597 | { |
---|
1598 | CDomain* domain; |
---|
1599 | |
---|
1600 | list<CEventServer::SSubEvent>::iterator it; |
---|
1601 | for (it = event.subEvents.begin(); it != event.subEvents.end(); ++it) |
---|
1602 | { |
---|
1603 | CBufferIn* buffer = it->buffer; |
---|
1604 | string domainId; |
---|
1605 | *buffer >> domainId; |
---|
1606 | domain = get(domainId); |
---|
1607 | domain->recvIndex(it->rank, *buffer); |
---|
1608 | } |
---|
1609 | |
---|
1610 | if (domain->isCompressible_) |
---|
1611 | { |
---|
1612 | std::sort(domain->indexesToWrite.begin(), domain->indexesToWrite.end()); |
---|
1613 | |
---|
1614 | CContextServer* server = CContext::getCurrent()->server; |
---|
1615 | domain->numberWrittenIndexes_ = domain->indexesToWrite.size(); |
---|
1616 | MPI_Allreduce(&domain->numberWrittenIndexes_, &domain->totalNumberWrittenIndexes_, 1, MPI_INT, MPI_SUM, server->intraComm); |
---|
1617 | MPI_Scan(&domain->numberWrittenIndexes_, &domain->offsetWrittenIndexes_, 1, MPI_INT, MPI_SUM, server->intraComm); |
---|
1618 | domain->offsetWrittenIndexes_ -= domain->numberWrittenIndexes_; |
---|
1619 | } |
---|
1620 | } |
---|
1621 | |
---|
1622 | /*! |
---|
1623 | Receive index information from client(s) |
---|
1624 | \param[in] rank rank of client source |
---|
1625 | \param[in] buffer message containing index info |
---|
1626 | */ |
---|
1627 | void CDomain::recvIndex(int rank, CBufferIn& buffer) |
---|
1628 | { |
---|
1629 | int type_int; |
---|
1630 | buffer >> type_int >> isCurvilinear >> indiSrv[rank] >> indjSrv[rank]; |
---|
1631 | type.setValue((type_attr::t_enum)type_int); // probleme des type enum avec les buffers : ToFix |
---|
1632 | |
---|
1633 | if (isCompressible_) |
---|
1634 | { |
---|
1635 | CArray<int, 1> writtenIndexes; |
---|
1636 | buffer >> writtenIndexes; |
---|
1637 | indexesToWrite.reserve(indexesToWrite.size() + writtenIndexes.numElements()); |
---|
1638 | for (int i = 0; i < writtenIndexes.numElements(); ++i) |
---|
1639 | indexesToWrite.push_back(writtenIndexes(i)); |
---|
1640 | } |
---|
1641 | } |
---|
1642 | |
---|
1643 | /*! |
---|
1644 | Receive longitude event from clients(s) |
---|
1645 | \param[in] event event contain info about rank and associated longitude |
---|
1646 | */ |
---|
1647 | void CDomain::recvLon(CEventServer& event) |
---|
1648 | { |
---|
1649 | list<CEventServer::SSubEvent>::iterator it; |
---|
1650 | for (it = event.subEvents.begin(); it != event.subEvents.end(); ++it) |
---|
1651 | { |
---|
1652 | CBufferIn* buffer = it->buffer; |
---|
1653 | string domainId; |
---|
1654 | *buffer >> domainId; |
---|
1655 | get(domainId)->recvLon(it->rank, *buffer); |
---|
1656 | } |
---|
1657 | } |
---|
1658 | |
---|
1659 | /*! |
---|
1660 | Receive longitude information from client(s) |
---|
1661 | \param[in] rank rank of client source |
---|
1662 | \param[in] buffer message containing longitude info |
---|
1663 | */ |
---|
1664 | void CDomain::recvLon(int rank, CBufferIn& buffer) |
---|
1665 | { |
---|
1666 | CArray<int,1> &indi = indiSrv[rank], &indj = indjSrv[rank]; |
---|
1667 | CArray<double,1> lon; |
---|
1668 | CArray<double,2> boundslon; |
---|
1669 | |
---|
1670 | buffer >> lon; |
---|
1671 | if (hasBounds) buffer >> boundslon; |
---|
1672 | |
---|
1673 | int i, j, ind_srv; |
---|
1674 | for (int ind = 0; ind < indi.numElements(); ind++) |
---|
1675 | { |
---|
1676 | i = indi(ind); j = indj(ind); |
---|
1677 | ind_srv = (i - zoom_ibegin_srv) + (j - zoom_jbegin_srv) * zoom_ni_srv; |
---|
1678 | lonvalue_srv(ind_srv) = lon(ind); |
---|
1679 | if (hasBounds) |
---|
1680 | { |
---|
1681 | for (int nv = 0; nv < nvertex; ++nv) |
---|
1682 | bounds_lon_srv(nv, ind_srv) = boundslon(nv, ind); |
---|
1683 | } |
---|
1684 | } |
---|
1685 | } |
---|
1686 | |
---|
1687 | /*! |
---|
1688 | Receive latitude event from clients(s) |
---|
1689 | \param[in] event event contain info about rank and associated latitude |
---|
1690 | */ |
---|
1691 | void CDomain::recvLat(CEventServer& event) |
---|
1692 | { |
---|
1693 | list<CEventServer::SSubEvent>::iterator it; |
---|
1694 | for (it = event.subEvents.begin(); it != event.subEvents.end(); ++it) |
---|
1695 | { |
---|
1696 | CBufferIn* buffer = it->buffer; |
---|
1697 | string domainId; |
---|
1698 | *buffer >> domainId; |
---|
1699 | get(domainId)->recvLat(it->rank, *buffer); |
---|
1700 | } |
---|
1701 | } |
---|
1702 | |
---|
1703 | /*! |
---|
1704 | Receive latitude information from client(s) |
---|
1705 | \param[in] rank rank of client source |
---|
1706 | \param[in] buffer message containing latitude info |
---|
1707 | */ |
---|
1708 | void CDomain::recvLat(int rank, CBufferIn& buffer) |
---|
1709 | { |
---|
1710 | CArray<int,1> &indi = indiSrv[rank], &indj = indjSrv[rank]; |
---|
1711 | CArray<double,1> lat; |
---|
1712 | CArray<double,2> boundslat; |
---|
1713 | |
---|
1714 | buffer >> lat; |
---|
1715 | if (hasBounds) buffer >> boundslat; |
---|
1716 | |
---|
1717 | int i, j, ind_srv; |
---|
1718 | for (int ind = 0; ind < indi.numElements(); ind++) |
---|
1719 | { |
---|
1720 | i = indi(ind); j = indj(ind); |
---|
1721 | ind_srv = (i - zoom_ibegin_srv) + (j - zoom_jbegin_srv) * zoom_ni_srv; |
---|
1722 | latvalue_srv(ind_srv) = lat(ind); |
---|
1723 | if (hasBounds) |
---|
1724 | { |
---|
1725 | for (int nv = 0; nv < nvertex; nv++) |
---|
1726 | bounds_lat_srv(nv, ind_srv) = boundslat(nv, ind); |
---|
1727 | } |
---|
1728 | } |
---|
1729 | } |
---|
1730 | |
---|
1731 | /*! |
---|
1732 | Receive area event from clients(s) |
---|
1733 | \param[in] event event contain info about rank and associated area |
---|
1734 | */ |
---|
1735 | void CDomain::recvArea(CEventServer& event) |
---|
1736 | { |
---|
1737 | list<CEventServer::SSubEvent>::iterator it; |
---|
1738 | for (it = event.subEvents.begin(); it != event.subEvents.end(); ++it) |
---|
1739 | { |
---|
1740 | CBufferIn* buffer = it->buffer; |
---|
1741 | string domainId; |
---|
1742 | *buffer >> domainId; |
---|
1743 | get(domainId)->recvArea(it->rank, *buffer); |
---|
1744 | } |
---|
1745 | } |
---|
1746 | |
---|
1747 | /*! |
---|
1748 | Receive area information from client(s) |
---|
1749 | \param[in] rank rank of client source |
---|
1750 | \param[in] buffer message containing area info |
---|
1751 | */ |
---|
1752 | void CDomain::recvArea(int rank, CBufferIn& buffer) |
---|
1753 | { |
---|
1754 | CArray<int,1> &indi = indiSrv[rank], &indj = indjSrv[rank]; |
---|
1755 | CArray<double,1> clientArea; |
---|
1756 | |
---|
1757 | buffer >> clientArea; |
---|
1758 | |
---|
1759 | int i, j, ind_srv; |
---|
1760 | for (int ind = 0; ind < indi.numElements(); ind++) |
---|
1761 | { |
---|
1762 | i = indi(ind); j = indj(ind); |
---|
1763 | ind_srv = (i - zoom_ibegin_srv) + (j - zoom_jbegin_srv) * zoom_ni_srv; |
---|
1764 | area_srv(ind_srv) = clientArea(ind); |
---|
1765 | } |
---|
1766 | } |
---|
1767 | |
---|
1768 | /*! |
---|
1769 | Check whether a domain has transformation |
---|
1770 | \return true if domain has transformation |
---|
1771 | */ |
---|
1772 | bool CDomain::hasTransformation() |
---|
1773 | { |
---|
1774 | return (!transformationMap_.empty()); |
---|
1775 | } |
---|
1776 | |
---|
1777 | /*! |
---|
1778 | Set transformation for current domain. It's the method to move transformation in hierarchy |
---|
1779 | \param [in] domTrans transformation on domain |
---|
1780 | */ |
---|
1781 | void CDomain::setTransformations(const TransMapTypes& domTrans) |
---|
1782 | { |
---|
1783 | transformationMap_ = domTrans; |
---|
1784 | } |
---|
1785 | |
---|
1786 | /*! |
---|
1787 | Get all transformation current domain has |
---|
1788 | \return all transformation |
---|
1789 | */ |
---|
1790 | CDomain::TransMapTypes CDomain::getAllTransformations(void) |
---|
1791 | { |
---|
1792 | return transformationMap_; |
---|
1793 | } |
---|
1794 | |
---|
1795 | /*! |
---|
1796 | Check the validity of all transformations applied on domain |
---|
1797 | This functions is called AFTER all inherited attributes are solved |
---|
1798 | */ |
---|
1799 | void CDomain::checkTransformations() |
---|
1800 | { |
---|
1801 | TransMapTypes::const_iterator itb = transformationMap_.begin(), it, |
---|
1802 | ite = transformationMap_.end(); |
---|
1803 | for (it = itb; it != ite; ++it) |
---|
1804 | { |
---|
1805 | (it->second)->checkValid(this); |
---|
1806 | } |
---|
1807 | } |
---|
1808 | |
---|
1809 | /*! |
---|
1810 | * Go through the hierarchy to find the domain from which the transformations must be inherited |
---|
1811 | */ |
---|
1812 | void CDomain::solveInheritanceTransformation() |
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1813 | { |
---|
1814 | if (hasTransformation() || !hasDirectDomainReference()) |
---|
1815 | return; |
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1816 | |
---|
1817 | CDomain* domain = this; |
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1818 | std::vector<CDomain*> refDomains; |
---|
1819 | while (!domain->hasTransformation() && domain->hasDirectDomainReference()) |
---|
1820 | { |
---|
1821 | refDomains.push_back(domain); |
---|
1822 | domain = domain->getDirectDomainReference(); |
---|
1823 | } |
---|
1824 | |
---|
1825 | if (domain->hasTransformation()) |
---|
1826 | for (size_t i = 0; i < refDomains.size(); ++i) |
---|
1827 | refDomains[i]->setTransformations(domain->getAllTransformations()); |
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1828 | |
---|
1829 | // Try to inherit the id of the referenced object as the domain name |
---|
1830 | // when no name was been defined and a defaut id is used. |
---|
1831 | if (name.isEmpty()) |
---|
1832 | { |
---|
1833 | static const std::string defId("__domain_undef_id_"); |
---|
1834 | const std::string& id = getId(); |
---|
1835 | if (id.size() > defId.size() && id.compare(0, defId.size(), defId) == 0) |
---|
1836 | name = domain->getId(); |
---|
1837 | } |
---|
1838 | } |
---|
1839 | |
---|
1840 | void CDomain::solveSrcInheritance() |
---|
1841 | { |
---|
1842 | if (!domain_src.isEmpty()) |
---|
1843 | { |
---|
1844 | if (!CDomain::has(this->domain_src.getValue())) \ |
---|
1845 | ERROR("CDomain::solveSrcInheritance()", \ |
---|
1846 | << "[ src_name = " << this->domain_src.getValue() << "]" \ |
---|
1847 | << " invalid domain name !"); |
---|
1848 | |
---|
1849 | srcObject_ = CDomain::get(this->domain_src.getValue()); |
---|
1850 | } |
---|
1851 | } |
---|
1852 | |
---|
1853 | CDomain* CDomain::getDomainSrc() |
---|
1854 | { |
---|
1855 | return srcObject_; |
---|
1856 | } |
---|
1857 | |
---|
1858 | /*! |
---|
1859 | Parse children nodes of a domain in xml file. |
---|
1860 | Whenver there is a new transformation, its type and name should be added into this function |
---|
1861 | \param node child node to process |
---|
1862 | */ |
---|
1863 | void CDomain::parse(xml::CXMLNode & node) |
---|
1864 | { |
---|
1865 | SuperClass::parse(node); |
---|
1866 | |
---|
1867 | if (node.goToChildElement()) |
---|
1868 | { |
---|
1869 | StdString zoomDomainDefRoot("zoom_domain_definition"); |
---|
1870 | StdString zoom("zoom_domain"); |
---|
1871 | StdString interpDomainDefRoot("interpolate_domain_definition"); |
---|
1872 | StdString interpFromFile("interpolate_domain"); |
---|
1873 | StdString generateRectilinearDefRoot("generate_rectilinear_domain_definition"); |
---|
1874 | StdString generateRectilinear("generate_rectilinear_domain"); |
---|
1875 | do |
---|
1876 | { |
---|
1877 | if (node.getElementName() == zoom) { |
---|
1878 | CZoomDomain* tmp = (CZoomDomainGroup::get(zoomDomainDefRoot))->createChild(); |
---|
1879 | tmp->parse(node); |
---|
1880 | transformationMap_.push_back(std::make_pair(TRANS_ZOOM_DOMAIN,tmp)); |
---|
1881 | } |
---|
1882 | else if (node.getElementName() == interpFromFile) |
---|
1883 | { |
---|
1884 | CInterpolateDomain* tmp = (CInterpolateDomainGroup::get(interpDomainDefRoot))->createChild(); |
---|
1885 | tmp->parse(node); |
---|
1886 | transformationMap_.push_back(std::make_pair(TRANS_INTERPOLATE_DOMAIN,tmp)); |
---|
1887 | } |
---|
1888 | else if (node.getElementName() == generateRectilinear) |
---|
1889 | { |
---|
1890 | CGenerateRectilinearDomain* tmp = (CGenerateRectilinearDomainGroup::get(generateRectilinearDefRoot))->createChild(); |
---|
1891 | tmp->parse(node); |
---|
1892 | transformationMap_.push_back(std::make_pair(TRANS_GENERATE_RECTILINEAR_DOMAIN,tmp)); |
---|
1893 | } |
---|
1894 | } while (node.goToNextElement()) ; |
---|
1895 | node.goToParentElement(); |
---|
1896 | } |
---|
1897 | } |
---|
1898 | //---------------------------------------------------------------- |
---|
1899 | |
---|
1900 | DEFINE_REF_FUNC(Domain,domain) |
---|
1901 | |
---|
1902 | ///--------------------------------------------------------------- |
---|
1903 | |
---|
1904 | } // namespace xios |
---|