source: XIOS/trunk/src/node/file.hpp @ 779

Last change on this file since 779 was 775, checked in by mhnguyen, 9 years ago

Implementing the reading of attributes of an axis from a file

+) 3d grid can be read directly from a file
+) Clean some redundant codes
+) Add new attribute declaration that allows to output only desired attributes

Test
+) On Curie
+) test_remap passes and result is correct

  • Property copyright set to
    Software name : XIOS (Xml I/O Server)
    http://forge.ipsl.jussieu.fr/ioserver
    Creation date : January 2009
    Licence : CeCCIL version2
    see license file in root directory : Licence_CeCILL_V2-en.txt
    or http://www.cecill.info/licences/Licence_CeCILL_V2-en.html
    Holder : CEA/LSCE (Laboratoire des Sciences du CLimat et de l'Environnement)
    CNRS/IPSL (Institut Pierre Simon Laplace)
    Project Manager : Yann Meurdesoif
    yann.meurdesoif@cea.fr
File size: 6.2 KB
RevLine 
[591]1#ifndef __XIOS_CFile__
2#define __XIOS_CFile__
[219]3
[591]4/// XIOS headers ///
5#include "xios_spl.hpp"
[219]6#include "field.hpp"
[300]7#include "data_output.hpp"
[599]8#include "data_input.hpp"
[219]9#include "declare_group.hpp"
[318]10#include "date.hpp"
[369]11#include "attribute_enum.hpp"
12#include "attribute_enum_impl.hpp"
[382]13#include "mpi.hpp"
[219]14
15
[300]16
[335]17namespace xios {
[509]18
[219]19   /// ////////////////////// Déclarations ////////////////////// ///
20
21   class CFileGroup;
22   class CFileAttributes;
23   class CFile;
24
[640]25   class CGarbageCollector;
26
[219]27   ///--------------------------------------------------------------
28
29   // Declare/Define CFileAttribute
30   BEGIN_DECLARE_ATTRIBUTE_MAP(CFile)
31#  include "file_attribute.conf"
32   END_DECLARE_ATTRIBUTE_MAP(CFile)
33
34   ///--------------------------------------------------------------
35
[509]36   /*!
37   \class CFile
38   This class corresponds to file component of the xml.
39   The class contains all the nessceary information to write data into a netcdf file: The most important thing
40   is the field(s) which will be written into file. Besides, there are some options to write
41   data into file, e.g: writting into only one file or multiple file; splitting a running into several files.
42   Moreover, there are some other attributes of netcdf file which are also stored in this class
43   */
[219]44   class CFile
45      : public CObjectTemplate<CFile>
46      , public CFileAttributes
47   {
48         /// typedef ///
49         typedef CObjectTemplate<CFile>   SuperClass;
50         typedef CFileAttributes SuperClassAttribute;
[509]51
[219]52      public :
[300]53         enum EEventId
54         {
[651]55           EVENT_ID_ADD_FIELD, EVENT_ID_ADD_FIELD_GROUP, EVENT_ID_ADD_VARIABLE,
[509]56           EVENT_ID_ADD_VARIABLE_GROUP, EVENT_ID_CREATE_ENABLED_FIELDS
[651]57         };
[509]58
[219]59         typedef CFileAttributes RelAttributes;
60         typedef CFileGroup      RelGroup;
61
62         /// Constructeurs ///
63         CFile(void);
[651]64         explicit CFile(const StdString& id);
65         CFile(const CFile& file);       // Not implemented yet.
66         CFile(const CFile* const file); // Not implemented yet.
[219]67
[509]68         /// Destructeur ///
69         virtual ~CFile(void);
70
71      public:
[219]72         /// Accesseurs ///
[773]73         const StdString& getFileOutputName(void) const;
[337]74         boost::shared_ptr<CDataOutput> getDataOutput(void) const;
[599]75         boost::shared_ptr<CDataInput> getDataInput(void) const;
[347]76         CFieldGroup* getVirtualFieldGroup(void) const;
[472]77         CVariableGroup* getVirtualVariableGroup(void) const;
[347]78         std::vector<CField*> getAllFields(void) const;
[472]79         std::vector<CVariable*> getAllVariables(void) const;
[219]80
[347]81         std::vector<CField* > getEnabledFields(int default_outputlevel = 5,
82                                                int default_level = 1,
83                                                bool default_enabled = true);
[219]84
85      public :
[509]86         // Some functions to verify state of file
[651]87         bool isSyncTime(void);
88         bool checkSplit(void);
89         bool checkSync(void);
90         void checkFile(void);
91         void initFile(void);
[219]92
93         /// Mutateurs ///
[509]94         // Set some root definitions in a file
[347]95         void setVirtualFieldGroup(CFieldGroup* newVFieldGroup);
[300]96         void setVirtualFieldGroup(void);
[472]97         void setVirtualVariableGroup(CVariableGroup* newVVariableGroup);
98         void setVirtualVariableGroup(void);
[509]99
[300]100         void createHeader(void);
[599]101         void openInReadMode(void);
[651]102         void close(void);
[775]103         void readAttributesOfEnabledFieldsInReadMode();
[509]104
105         // Some processing on file
[445]106         void solveFieldRefInheritance(bool apply);
[651]107         void processEnabledFile(void);
[509]108         void solveAllRefOfEnabledFields(bool sendToServer);
[640]109         void buildFilterGraphOfEnabledFields(CGarbageCollector& gc);
[598]110         void prefetchEnabledReadModeFields();
111         void prefetchEnabledReadModeFieldsIfNeeded();
[219]112
[509]113         // Add component into file
[651]114         CField* addField(const string& id = "");
115         CFieldGroup* addFieldGroup(const string& id = "");
116         CVariable* addVariable(const string& id = "");
117         CVariableGroup* addVariableGroup(const string& id = "");
[509]118
119         // Send info to serever
120         void sendEnabledFields();
[651]121         void sendAddField(const string& id = "");
122         void sendAddFieldGroup(const string& id = "");
[509]123         void sendAddAllVariables();
[651]124         void sendAddVariable(const string& id = "");
125         void sendAddVariableGroup(const string& id = "");
[509]126
127         // Receive info from client
[651]128         static void recvAddField(CEventServer& event);
129         void recvAddField(CBufferIn& buffer);
130         static void recvAddFieldGroup(CEventServer& event);
131         void recvAddFieldGroup(CBufferIn& buffer);
132         static void recvAddVariable(CEventServer& event);
133         void recvAddVariable(CBufferIn& buffer);
134         static void recvAddVariableGroup(CEventServer& event);
135         void recvAddVariableGroup(CBufferIn& buffer);
[509]136
137         // Dispatch event
[651]138         static bool dispatchEvent(CEventServer& event);
[509]139
140      public:
141         /// Accesseurs statiques ///
142         static StdString GetName(void);
143         static StdString GetDefName(void);
144
145         static ENodeType GetType(void);
146      public:
147         /// Traitements ///
[651]148         virtual void solveDescInheritance(bool apply, const CAttributeMap* const parent = 0);
[509]149
150          /// Autres ///
[651]151         virtual void parse(xml::CXMLNode& node);
[509]152         virtual StdString toString(void) const;
153      public:
154
[651]155         CDate lastSync;
156         CDate lastSplit;
[609]157         int nbAxis, nbDomains;
[651]158         bool isOpen;
159         bool allDomainEmpty;
160         MPI_Comm fileComm;
[509]161
[219]162      private :
163         /// Propriétés privées ///
[347]164         CFieldGroup* vFieldGroup;
[651]165         CVariableGroup* vVariableGroup;
[337]166         boost::shared_ptr<CDataOutput> data_out;
[599]167         boost::shared_ptr<CDataInput> data_in;
[347]168         std::vector<CField*> enabledFields;
[219]169
[509]170      public:
[651]171        //         virtual void toBinary  (StdOStream& os) const;
172        //         virtual void fromBinary(StdIStream& is);
[509]173
[219]174   }; // class CFile
175
176   ///--------------------------------------------------------------
177
178   // Declare/Define CFileGroup and CFileDefinition
179   DECLARE_GROUP(CFile);
180
181   ///--------------------------------------------------------------
182
[335]183} // namespace xios
[219]184
[591]185#endif // __XIOS_CFile__
Note: See TracBrowser for help on using the repository browser.