- Timestamp:
- 07/31/20 12:21:59 (4 years ago)
- Location:
- XIOS/trunk
- Files:
-
- 7 edited
Legend:
- Unmodified
- Added
- Removed
-
XIOS/trunk/generic_testcase/context_atm.xml
r1920 r1921 7 7 <domain id="domain" /> 8 8 <domain id="other_domain" /> 9 <domain id="dst_domain" ni_glo="36" nj_glo="18" type="rectilinear"/> 10 </domain_definition> 11 9 </domain> 10 12 11 <axis_definition> 13 12 <axis id="axis" /> … … 16 15 <axis id="ensemble" /> 17 16 18 19 17 <axis id="other_axis" /> 20 18 <axis id="other_domain_X" /> … … 44 42 </grid> 45 43 46 47 48 44 49 45 <grid id="grid_X"> … … 299 295 300 296 <file_definition type="one_file" > 301 <file id="atm_output_reduction" output_freq="6ts" type="one_file" enabled="true" split_freq="12ts" > 302 <field field_ref="field2D" freq_op="3ts" operation="average" name="field2D_average"/> 303 <field field_ref="field2D" freq_op="3ts" operation="accumulate" name="field2D_sum"/> 304 <field field_ref="field2D" freq_op="3ts" operation="maximum" name="field2D_max"/> 305 <field field_ref="field2D" freq_op="3ts" operation="minimum" name="field2D_min"/> 297 <file id="atm_output_inverse_axis" output_freq="4ts" type="one_file" enabled="true"> 298 <field field_ref="field_Z" /> 299 <field id="field_inverse_axis" field_ref="field_Z" grid_ref="grid1D_inverse_axis" /> 306 300 </file> 307 308 <file id="atm_output_ref" output_freq="1ts" type="one_file" enabled="true">309 <field field_ref="field2D" />310 </file>311 312 301 313 302 -
XIOS/trunk/generic_testcase/iodef.xml
r1919 r1921 40 40 41 41 42 <context id="atm" src="./ context_atm.xml"/>42 <context id="atm" src="./lk_context_atm.xml"/> 43 43 <context id="grid_dynamico" src="./context_grid_dynamico.xml"/> 44 44 … … 61 61 <variable id="check_event_sync" type="bool">true</variable> 62 62 </variable_group> 63 <variable id="activate_non_distributed_transformation" type="bool"> true</variable>63 <variable id="activate_non_distributed_transformation" type="bool">false</variable> 64 64 </variable_definition> 65 65 </context> -
XIOS/trunk/src/test/generic_testcase.f90
r1914 r1921 356 356 pressure=1e20 357 357 DO j=0,z-1 358 pressure(:,j)=axis_value(j) ;358 pressure(:,j)=axis_value(j) * 100000; 359 359 DO i=0,xy-1 360 360 IF (domain_index(i)/=-1) THEN … … 559 559 ENDDO 560 560 561 pressure=1e20561 other_pressure=1e20 562 562 DO j=0,z-1 563 pressure(:,j)=axis_value(j);563 other_pressure(:,j)=axis_value(j) * 100000 ; 564 564 DO i=0,xy-1 565 565 IF (domain_index(i)/=-1) THEN -
XIOS/trunk/src/transformation/axis_algorithm_extract_domain.cpp
r1852 r1921 78 78 TRY 79 79 { 80 double defaultValue = std::numeric_limits<double>::quiet_NaN(); 81 if(firstPass) dataOut = defaultValue; 80 82 reduction_->apply(localIndex, dataInput, dataOut, flagInitial, ignoreMissingValue, firstPass); 81 83 } -
XIOS/trunk/xios_test_suite/TEST_SUITE/iodef.xml
r1909 r1921 9 9 <variable id="domain"> XIOS::ATMdomain </variable> 10 10 <variable id="domain_mask"> true </variable> 11 <variable id="axis_mask"> true </variable>11 <variable id="axis_mask"> false </variable> 12 12 <variable id="init_field2D"> rank </variable> 13 13 <variable id="ni"> 36 </variable> … … 61 61 <variable id="check_event_sync" type="bool">true</variable> 62 62 </variable_group> 63 <variable id="activate_non_distributed_transformation" type="bool"> true</variable>63 <variable id="activate_non_distributed_transformation" type="bool">false</variable> 64 64 </variable_definition> 65 65 </context> -
XIOS/trunk/xios_test_suite/TEST_SUITE/test_axis_algo/checkfile.def
r1888 r1921 1 1 #all 2 atm_output_zoom.nc 3 #atm_output_inverse.nc 2 #atm_output_zoom.nc 3 atm_output_axis_transformation_reduce.nc 4 atm_output_axis_transformation_zoom.nc 5 atm_output_axis_transformation_extract.nc 6 atm_output_axis_transformation_extract_domain.nc 7 atm_output_axis_transformation_interpolate.nc 8 atm_output_axis_transformation_temporal_splitting.nc 9 atm_output_axis_transformation_duplicate_scalar.nc 10 atm_output_axis_transformation_inverse.nc -
XIOS/trunk/xios_test_suite/TEST_SUITE/test_axis_algo/context_atm.xml
r1807 r1921 11 11 <axis_definition> 12 12 <axis id="axis" /> 13 <axis id="axis_dup" />14 13 <axis id="domain_X" /> 15 14 <axis id="domain_Y" /> 16 15 <axis id="ensemble" /> 16 <axis id="axis_interpolate" n_glo="2" value="(0,1)[80000 40000]"> 17 <interpolate_axis type="polynomial" order="1" coordinate="pressure"/> 18 </axis> 19 <axis id="axis_temporal_splitting" n_glo="4"> 20 <temporal_splitting /> 21 </axis> 22 23 <axis id="axis_duplicate_scalar" n_glo="5"> 24 <duplicate_scalar /> 25 </axis> 26 27 28 17 29 18 30 <axis id="other_axis" /> … … 22 34 </axis_definition> 23 35 24 <axis_definition>25 <axis id="axis_zoom" axis_ref="axis">26 <zoom_axis begin="0" n="5"/>27 </axis>28 29 <axis id="domain_X_zoom" axis_ref="domain_X">30 <zoom_axis begin="0" n="10"/>31 </axis>32 33 <axis id="domain_Y_zoom" axis_ref="domain_Y">34 <zoom_axis begin="3" n="5"/>35 </axis>36 37 <axis id="domain_Y_inverse" axis_ref="domain_Y">38 <inverse_axis />39 </axis>40 41 </axis_definition>42 43 36 <scalar_definition> 44 37 <scalar id="scalar" /> … … 53 46 <axis axis_ref="axis" /> 54 47 </grid> 55 48 49 <grid id="grid3D_interpolate_axis"> 50 <domain domain_ref="domain" /> 51 <axis axis_ref="axis_interpolate" /> 52 </grid> 53 54 56 55 <grid id="grid2D"> 57 56 <domain domain_ref="domain" /> 58 57 </grid> 59 58 59 <grid id="grid2D_extract_domain"> 60 <axis n_glo="36" > 61 <extract_domain direction="iDir" position="5" /> 62 </axis> 63 </grid> 64 65 66 60 67 <grid id="grid1D"> 61 68 <axis axis_ref="axis" /> 62 69 </grid> 70 71 <grid id="grid1D_extract"> 72 <axis id="axis_extract" axis_ref="axis"> 73 <extract_axis n="5" begin="0" /> 74 </axis> 75 </grid> 76 77 <grid id="grid1D_zoom"> 78 <axis id="axis_zoom" axis_ref="axis"> 79 <zoom_axis n="5" begin="0" /> 80 </axis> 81 </grid> 82 83 84 <grid id="grid1D_inverse"> 85 <axis id="axis_inverse" axis_ref="axis"> 86 <inverse_axis /> 87 </axis> 88 </grid> 89 90 <grid id="grid1D_reduce_sum"> 91 <axis id="axis_reduce_sum" axis_ref="axis"> 92 <reduce_axis operation="sum"/> 93 </axis> 94 </grid> 95 96 <grid id="grid1D_reduce_max"> 97 <axis id="axis_reduce_max" axis_ref="axis"> 98 <reduce_axis operation="max"/> 99 </axis> 100 </grid> 101 102 103 <grid id="grid1D_reduce_min"> 104 <axis id="axis_reduce_min" axis_ref="axis"> 105 <reduce_axis operation="min"/> 106 </axis> 107 </grid> 108 109 <grid id="grid1D_reduce_ave"> 110 <axis id="axis_reduce_ave" axis_ref="axis"> 111 <reduce_axis operation="average"/> 112 </axis> 113 </grid> 114 115 <grid id="grid_src"> 116 <domain domain_ref="domain" /> 117 <axis axis_ref="axis" /> 118 <scalar scalar_ref="scalar"/> 119 </grid> 120 121 <grid id="grid_dst"> 122 <domain domain_ref="domain" /> 123 <axis axis_ref="axis" /> 124 <axis axis_ref="axis_temporal_splitting"/> 125 </grid> 126 127 <grid id="grid0D"> 128 <scalar scalar_ref="scalar" /> 129 </grid> 130 131 <grid id="grid1D_duplicate_scalar"> 132 <axis axis_ref="axis_duplicate_scalar" /> 133 </grid> 134 135 136 63 137 64 138 <grid id="grid_X"> … … 66 140 </grid> 67 141 68 <grid id="grid_X_zoom">69 <axis axis_ref="domain_X_zoom" />70 </grid>71 72 142 <grid id="grid_Y"> 73 143 <axis axis_ref="domain_Y" /> 74 144 </grid> 75 145 76 <grid id="grid_Y_inverse">77 <axis axis_ref="domain_Y_inverse" />78 </grid>79 80 146 <grid id="grid_XY"> 81 147 <axis axis_ref="domain_X" /> 82 148 <axis axis_ref="domain_Y" /> 83 149 </grid> 150 151 <grid id="gridXY_zoomX"> 152 <axis id="domain_X_zoom" axis_ref="domain_X"> 153 <zoom_axis n="6" begin="1" /> 154 </axis> 155 <axis axis_ref="domain_Y" /> 156 </grid> 157 158 <grid id="gridXY_zoomY"> 159 <axis axis_ref="domain_X" /> 160 <axis id="domain_Y_zoom" axis_ref="domain_Y"> 161 <zoom_axis n="4" begin="2" /> 162 </axis> 163 </grid> 164 165 84 166 85 167 <grid id="grid_XYZ"> … … 151 233 </grid> 152 234 153 154 <grid id="grid_XY_zoom_Y">155 <axis axis_ref="domain_X" />156 <axis axis_ref="domain_Y_zoom" />157 </grid>158 159 <grid id="grid_XY_zoom_X">160 <axis axis_ref="domain_X_zoom" />161 <axis axis_ref="domain_Y" />162 </grid>163 164 165 166 167 235 168 236 … … 261 329 </grid> 262 330 263 264 265 266 267 268 269 270 271 272 <grid id="grid_vert_reduce"> 273 <domain domain_ref="domain" /> 274 <scalar > 275 <reduce_axis operation="sum" /> 276 </scalar> 277 </grid> 278 279 <grid id="grid_horiz_reduce"> 280 <scalar > 281 <reduce_domain operation="sum" /> 282 </scalar> 283 <axis axis_ref="axis" /> 284 </grid> 285 286 <grid id="grid_zoom_vert"> 287 <domain domain_ref="domain" /> 288 <axis axis_ref="axis_zoom" /> 289 </grid> 290 291 <grid id="grid_zoom_vert_sum"> 292 <scalar > 293 <reduce_domain operation="sum" /> 294 </scalar> 295 <axis axis_ref="axis_zoom" /> 296 </grid> 297 298 <grid id="grid_lat"> 299 <axis axis_ref="domain_Y"> 300 <reduce_domain direction="iDir" operation="sum"/> 301 </axis> 302 <axis axis_ref="axis" /> 303 </grid> 304 305 306 <grid id="grid3D_invert"> 307 <domain domain_ref="domain"> 308 <reorder_domain invert_lat="true" /> 309 </domain> 310 <axis axis_ref="axis" /> 311 </grid> 312 313 <grid id="grid2D_invert"> 314 <domain domain_ref="domain"> 315 <reorder_domain invert_lat="true" shift_lon_fraction="0.5" min_lon="0" max_lon="360"/> 316 </domain> 317 </grid> 318 319 331 320 332 </grid_definition> 321 333 322 334 323 335 <field_definition level="1" prec="8" operation="instant" freq_op="1ts" enabled=".true." default_value="1.e+20" detect_missing_value="true"> 324 <field id="field2D" grid_ref="grid2D" build_workflow_graph="false"/>325 <field id="field3D" grid_ref="grid3D" build_workflow_graph="true"/>336 <field id="field2D" grid_ref="grid2D" /> 337 <field id="field3D" grid_ref="grid3D" /> 326 338 <field id="pressure" grid_ref="grid3D" /> 327 339 <field id="field3D_recv" read_access="true" grid_ref="grid3D" field_ref="field3D" /> 328 340 <field id="field3D_resend" grid_ref="grid3D" /> 329 341 330 <field id="field_X" grid_ref="grid_X" build_workflow_graph="false"/>331 <field id="field_Y" grid_ref="grid_Y" build_workflow_graph="false"/>332 <field id="field_Z" grid_ref="grid1D" build_workflow_graph="false"/>342 <field id="field_X" grid_ref="grid_X" /> 343 <field id="field_Y" grid_ref="grid_Y" /> 344 <field id="field_Z" grid_ref="grid1D" /> 333 345 <field id="field_XY" grid_ref="grid_XY" /> 334 346 <field id="field_XYZ" grid_ref="grid_XYZ" /> 335 347 <field id="field_XZ" grid_ref="grid_XZ" /> 336 348 <field id="field_YZ" grid_ref="grid_YZ" /> 337 338 <field id="field_zoom_vert" field_ref="field3D" grid_ref="grid_zoom_vert" />339 <field id="field_zoom_vert_sum" field_ref="field_zoom_vert" grid_ref="grid_zoom_vert_sum" />340 341 349 342 350 … … 356 364 357 365 358 359 360 366 <field id="other_field2D" grid_ref="other_grid2D"/> 361 367 <field id="other_field3D" grid_ref="other_grid3D" /> … … 386 392 <field id="other_field_YZW" grid_ref="other_grid_YZW" /> 387 393 388 389 390 394 <field id="field_src" grid_ref="grid_src" > field3D </field> 391 395 392 396 393 397 </field_definition> 398 399 400 401 <!-- implementation of specifics test case --> 402 <!-- simplest test cases : output data to file --> 403 394 404 395 405 396 406 <file_definition type="one_file" > 397 398 399 <file id="atm_output_zoom" output_freq="1ts" enabled="true"> 400 <field field_ref="field_XY" grid_ref="grid_XY_zoom_Y" operation="instant" enabled="true"/> 401 <!-- <field field_ref="field_Y" grid_ref="grid_Y_inverse" operation="instant" enabled="true"/> --> 402 </file> 403 404 405 406 <file id="atm_output_other" output_freq="1ts" enabled="false"> 407 <field field_ref="other_field3D" enabled="false"/> 408 <field field_ref="other_field2D" enabled="true"/> 409 <field field_ref="other_field_X" enabled="false"/> 410 <field field_ref="other_field_Y" enabled="false"/> 411 <field field_ref="other_field_XY" enabled="false"/> 412 <field field_ref="other_field_Z" enabled="false"/> 413 <field field_ref="other_field_XYZ" enabled="false"/> 414 <field field_ref="other_field_XZ" enabled="false"/> 415 <field field_ref="other_field_YZ" enabled="false"/> 407 <file id="atm_output_axis_transformation_reduce" output_freq="4ts" type="one_file" enabled="true"> 408 <field field_ref="field_Z" /> 409 <field id="field_Z_reduce_sum" field_ref="field_Z" grid_ref="grid1D_reduce_sum" /> 410 <field id="field_Z_reduce_max" field_ref="field_Z" grid_ref="grid1D_reduce_max" /> 411 <field id="field_Z_reduce_min" field_ref="field_Z" grid_ref="grid1D_reduce_min" /> 412 <field id="field_Z_reduce_ave" field_ref="field_Z" grid_ref="grid1D_reduce_ave" /> 413 </file> 414 415 <file id="atm_output_axis_transformation_zoom" output_freq="12ts" type="one_file" enabled="true"> 416 <field field_ref="field_Z" /> 417 <field id="field_Z_zoom" field_ref="field_Z" grid_ref="grid1D_zoom" /> 418 <field field_ref="field_XY" /> 419 <field id="field_XY_zoomX" field_ref="field_XY" grid_ref="gridXY_zoomX" /> 420 <field id="field_XY_zoomY" field_ref="field_XY" grid_ref="gridXY_zoomY" /> 421 </file> 422 423 <file id="atm_output_axis_transformation_extract" output_freq="12ts" type="one_file" enabled="true"> 424 <field field_ref="field_Z" /> 425 <field id="field_Z_extract" field_ref="field_Z" grid_ref="grid1D_extract" /> 426 </file> 427 428 429 <file id="atm_output_axis_transformation_inverse" output_freq="12ts" type="one_file" enabled="true"> 430 <field field_ref="field_Z" /> 431 <field id="field_Z_inverse" field_ref="field_Z" grid_ref="grid1D_inverse" /> 432 </file> 433 434 <file id="atm_output_axis_transformation_extract_domain" output_freq="12ts" type="one_file" enabled="true"> 435 <field field_ref="field2D" /> 436 <field id="field2D_extract" field_ref="field2D" grid_ref="grid2D_extract_domain" /> 437 </file> 438 439 <file id="atm_output_axis_transformation_interpolate" output_freq="24ts" type="one_file" enabled="true"> 440 <field field_ref="field3D" /> 441 <field field_ref="pressure" /> 442 <field id="field_interpolate_axis" field_ref="field3D" grid_ref="grid3D_interpolate_axis" /> 443 </file> 444 445 <file id="atm_output_axis_transformation_temporal_splitting" output_freq="4ts" type="one_file" enabled="true"> 446 <field field_ref="field_src" operation="instant" /> 447 <field id="field_temporal_splitting" field_ref="field_src" grid_ref="grid_dst" /> 448 </file> 449 450 <file id="atm_output_axis_transformation_duplicate_scalar" output_freq="4ts" type="one_file" enabled="true"> 451 <field field_ref="field_Z" /> 452 <field id="field_0D" field_ref="field_Z" name="field_0D" grid_ref="grid0D" /> 453 <field id="field_duplicate_scalar" field_ref="field_0D" name="field_duplicate_scalar" grid_ref="grid1D_duplicate_scalar" /> 454 </file> 455 456 457 458 459 460 <file id="atm_output" output_freq="1ts" type="one_file" enabled="false"> 461 <field field_ref="field3D" /> 462 <field field_ref="field2D" /> 463 <field field_ref="field_X" /> 464 <field field_ref="field_Y" /> 465 <field field_ref="field_XY" /> 466 <field field_ref="field_Z" /> 467 <field field_ref="field_XYZ" /> 468 <field field_ref="field_XZ" /> 469 <field field_ref="field_YZ" /> 470 <field field_ref="pressure" /> 471 <field field_ref="field3D_resend" /> 472 </file> 473 474 <file id="atm_output_other" output_freq="1ts" type="one_file" enabled="false"> 475 <field field_ref="other_field3D" /> 476 <field field_ref="other_field2D" /> 477 <field field_ref="other_field_X" /> 478 <field field_ref="other_field_Y" /> 479 <field field_ref="other_field_XY" /> 480 <field field_ref="other_field_Z" /> 481 <field field_ref="other_field_XYZ" /> 482 <field field_ref="other_field_XZ" /> 483 <field field_ref="other_field_YZ" /> 484 <field field_ref="other_pressure" /> 485 <field field_ref="other_field3D_resend" /> 416 486 </file> 417 487 418 488 <file id="atm_output_W" output_freq="1ts" enabled="false"> 419 <field field_ref="field3D_W" enabled="true"/> 420 <field field_ref="field2D_W" enabled="true"/> 421 <field field_ref="field_XW" enabled="true"/> 422 <field field_ref="field_YW" enabled="true"/> 423 <field field_ref="field_XYW" enabled="true"/> 424 <field field_ref="field_ZW" enabled="true"/> 425 <field field_ref="field_XYZW" enabled="true"/> 426 <field field_ref="field_XZW" enabled="true"/> 427 <field field_ref="field_YZW" enabled="true"/> 428 </file> 429 430 431 <file id="atm_output_reorder" output_freq="1ts" enabled="false" > 432 <field field_ref="field2D" grid_ref="grid2D_invert" enabled="true"/> 433 </file> 434 435 <file id="test_grid_lat" output_freq="1ts" enabled="false"> 436 <field field_ref="field3D" operation="instant" /> 437 <field id="field_reduce_lat" field_ref="field3D" grid_ref="grid_lat" operation="instant" /> 438 </file> 489 <field field_ref="field3D_W" /> 490 <field field_ref="field2D_W" /> 491 <field field_ref="field_XW" /> 492 <field field_ref="field_YW" /> 493 <field field_ref="field_XYW" /> 494 <field field_ref="field_ZW" /> 495 <field field_ref="field_XYZW" /> 496 <field field_ref="field_XZW" /> 497 <field field_ref="field_YZW" /> 498 </file> 499 439 500 440 501 </file_definition>
Note: See TracChangeset
for help on using the changeset viewer.