# # ChangeLog for XIOS/trunk # # Generated by Trac 1.0.1 # 04/19/24 11:18:55 Tue, 29 May 2018 13:45:22 GMT oabramkina [1508] * XIOS/dev/XIOS_DEV_CMIP6/tools/archive/boost.tar.gz (modified) * XIOS/trunk/tools/archive/boost.tar.gz (modified) Boost: adding a missing config file for Cray. Tue, 29 May 2018 12:43:56 GMT oabramkina [1507] * XIOS/dev/XIOS_DEV_CMIP6/src/node/mesh.cpp (modified) * XIOS/trunk/src/node/mesh.cpp (modified) Bigfix for UGRID: conversion from int to MPI_unsigned_long wasn't ... Fri, 27 Apr 2018 09:00:44 GMT oabramkina [1496] * XIOS/dev/XIOS_DEV_CMIP6/src/date.cpp (modified) * XIOS/trunk/src/date.cpp (modified) Trunk and CMIP6: bugfix in addition of a month in case of a user- ... Fri, 20 Apr 2018 15:29:28 GMT oabramkina [1490] * XIOS/dev/XIOS_DEV_CMIP6/tools/archive/boost.tar.gz (modified) * XIOS/trunk/tools/archive/boost.tar.gz (modified) Reconfiguring Boost with older Intel compilator (2011 -ansi). Tested ... Fri, 20 Apr 2018 15:04:38 GMT oabramkina [1488] * XIOS/dev/XIOS_DEV_CMIP6/src/node/context.cpp (modified) * XIOS/trunk/src/node/context.cpp (modified) Trunk and CMIP6: adding a check on output_freq attribute. Exception is ... Fri, 20 Apr 2018 13:04:38 GMT oabramkina [1487] * XIOS/trunk/src/io/nc4_data_input.cpp (modified) * XIOS/trunk/src/io/nc4_data_input.hpp (modified) * XIOS/trunk/src/node/domain.cpp (modified) * XIOS/trunk/src/node/file.cpp (modified) Trunk: minor modifications for reading UGRID. Using attribute nvertex ... Fri, 13 Apr 2018 15:24:22 GMT ymipsl [1484] * XIOS/trunk/arch/arch-X64_IRENE.env (added) * XIOS/trunk/arch/arch-X64_IRENE.fcm (added) * XIOS/trunk/arch/arch-X64_IRENE.path (added) Add Irène arch files (trunk) YM Thu, 12 Apr 2018 16:51:08 GMT oabramkina [1478] * XIOS/dev/XIOS_DEV_CMIP6/src/attribute_template.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/attribute_template_impl.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/type/type.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/type/type_impl.hpp (modified) * XIOS/trunk/src/attribute_template.hpp (modified) * XIOS/trunk/src/attribute_template_impl.hpp (modified) * XIOS/trunk/src/type/type.hpp (modified) * XIOS/trunk/src/type/type_impl.hpp (modified) Exception handling for attributes by means of dynamic binding. This ... Thu, 12 Apr 2018 09:12:11 GMT oabramkina [1477] * XIOS/dev/XIOS_DEV_CMIP6/src/attribute_template_impl.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/type/type_impl.hpp (modified) * XIOS/trunk/src/attribute_template_impl.hpp (modified) * XIOS/trunk/src/type/type_impl.hpp (modified) Implementing exception handling for accessing attribute value. In ... Wed, 11 Apr 2018 16:10:39 GMT oabramkina [1476] * XIOS/dev/XIOS_DEV_CMIP6/tools/archive/boost.tar.gz (modified) * XIOS/trunk/tools/archive/boost.tar.gz (modified) Trunk and XIOS_DEV_CMIP6: updating Boost configuration so that it ... Tue, 03 Apr 2018 14:52:37 GMT oabramkina [1471] * XIOS/trunk/src/context_client.cpp (modified) * XIOS/trunk/src/filter/file_writer_filter.cpp (modified) * XIOS/trunk/src/filter/spatial_transform_filter.cpp (modified) * XIOS/trunk/src/filter/store_filter.cpp (modified) * XIOS/trunk/src/functor/accumulate.cpp (modified) * XIOS/trunk/src/functor/average.cpp (modified) * XIOS/trunk/src/functor/maximum.cpp (modified) * XIOS/trunk/src/functor/minimum.cpp (modified) * XIOS/trunk/src/transformation/Functions/average_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/max_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/min_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/sum_reduction.cpp (modified) * XIOS/trunk/src/transformation/generic_algorithm_transformation.cpp (modified) * XIOS/trunk/src/utils.hpp (modified) Trunk: few corrections in order to be in compliance with c++98 norms. ... Wed, 28 Mar 2018 15:24:06 GMT oabramkina [1470] * XIOS/dev/XIOS_DEV_CMIP6/arch/arch-X64_CURIE_GCC.env (modified) * XIOS/dev/XIOS_DEV_CMIP6/arch/arch-X64_CURIE_GCC.path (modified) * XIOS/dev/XIOS_DEV_CMIP6/arch/arch-X64_CURIE_PGI.env (modified) * XIOS/dev/XIOS_DEV_CMIP6/arch/arch-X64_CURIE_PGI.path (modified) * XIOS/trunk/arch/arch-X64_CURIE_GCC.env (modified) * XIOS/trunk/arch/arch-X64_CURIE_GCC.path (modified) * XIOS/trunk/arch/arch-X64_CURIE_PGI.env (modified) * XIOS/trunk/arch/arch-X64_CURIE_PGI.path (modified) Changing compilation settings for PGI and GCC on Curie in order to use ... Wed, 14 Mar 2018 14:56:53 GMT oabramkina [1458] * XIOS/dev/XIOS_DEV_CMIP6/arch/arch-XC30_Cray.path (modified) * XIOS/dev/XIOS_DEV_CMIP6/make_xios (modified) * XIOS/trunk/arch/arch-XC30_Cray.path (modified) * XIOS/trunk/make_xios (modified) Few corrections related to compilation options --use_extern_boost and ... Mon, 12 Mar 2018 17:16:22 GMT oabramkina [1455] * XIOS/dev/XIOS_DEV_CMIP6/tools/archive/boost.tar.gz (modified) * XIOS/trunk/tools/archive/boost.tar.gz (modified) Updating boost to 1.66. Fri, 09 Mar 2018 10:02:12 GMT oabramkina [1452] * XIOS/trunk/arch/arch-X64_CURIE.env (modified) * XIOS/trunk/arch/arch-X64_CURIE.path (modified) * XIOS/trunk/arch/arch-XC30_Cray.env (modified) * XIOS/trunk/arch/arch-XC30_Cray.path (modified) * XIOS/trunk/make_xios (modified) Trunk: adding a compilation option '--use_extern_blitz' to allow usage ... Thu, 08 Mar 2018 16:46:28 GMT oabramkina [1451] * XIOS/dev/XIOS_DEV_CMIP6/make_xios (modified) * XIOS/trunk/make_xios (modified) And adding a mistakenly deleted line in r1450. Thu, 08 Mar 2018 16:30:28 GMT oabramkina [1450] * XIOS/dev/XIOS_DEV_CMIP6/make_xios (modified) * XIOS/trunk/make_xios (modified) Adding back light memory tracking to trunk and adding it to dev_cmip6. Thu, 08 Mar 2018 15:46:40 GMT oabramkina [1448] * XIOS/trunk/arch/arch-GCC_LINUX.env (modified) * XIOS/trunk/arch/arch-GCC_LINUX.path (modified) * XIOS/trunk/arch/arch-X64_CURIE.env (modified) * XIOS/trunk/arch/arch-X64_CURIE.path (modified) * XIOS/trunk/arch/arch-XC30_Cray.env (modified) * XIOS/trunk/arch/arch-XC30_Cray.path (modified) * XIOS/trunk/bld.cfg (modified) * XIOS/trunk/make_xios (modified) Trunk: adding a compilation option '--use_extern_boost' to allow usage ... Wed, 20 Dec 2017 13:20:08 GMT oabramkina [1387] * XIOS/dev/XIOS_DEV_CMIP6/src/node/field.cpp (modified) * XIOS/trunk/src/node/field.cpp (modified) Fixing a bug in case of output_freq defined in months to avoid adding a ... Wed, 06 Dec 2017 07:34:41 GMT rlacroix [1358] * XIOS/dev/XIOS_DEV_CMIP6/src/filter/file_server_writer_filter.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/filter/file_server_writer_filter.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/filter/file_writer_filter.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/filter/file_writer_filter.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/filter/filter.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/filter/filter.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/filter/input_pin.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/filter/output_pin.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/filter/output_pin.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/filter/store_filter.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/filter/store_filter.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/filter/temporal_filter.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/filter/temporal_filter.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/node/context.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/node/context.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/node/field.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/node/field.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/node/file.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/node/file.hpp (modified) * XIOS/trunk/src/filter/file_writer_filter.cpp (modified) * XIOS/trunk/src/filter/file_writer_filter.hpp (modified) * XIOS/trunk/src/filter/filter.cpp (modified) * XIOS/trunk/src/filter/filter.hpp (modified) * XIOS/trunk/src/filter/input_pin.hpp (modified) * XIOS/trunk/src/filter/output_pin.cpp (modified) * XIOS/trunk/src/filter/output_pin.hpp (modified) * XIOS/trunk/src/filter/store_filter.cpp (modified) * XIOS/trunk/src/filter/store_filter.hpp (modified) * XIOS/trunk/src/filter/temporal_filter.cpp (modified) * XIOS/trunk/src/filter/temporal_filter.hpp (modified) * XIOS/trunk/src/node/context.cpp (modified) * XIOS/trunk/src/node/context.hpp (modified) * XIOS/trunk/src/node/field.cpp (modified) * XIOS/trunk/src/node/field.hpp (modified) * XIOS/trunk/src/node/file.cpp (modified) * XIOS/trunk/src/node/file.hpp (modified) Support reentrant workflows and workflows with temporal integration for ... Wed, 06 Dec 2017 07:34:31 GMT rlacroix [1357] * XIOS/dev/XIOS_DEV_CMIP6/src/calendar.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/calendar.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/node/context.cpp (modified) * XIOS/trunk/src/calendar.cpp (modified) * XIOS/trunk/src/calendar.hpp (modified) * XIOS/trunk/src/node/context.cpp (modified) Add some extra checks when switching to the next timestep. Wed, 22 Nov 2017 12:19:51 GMT oabramkina [1343] * XIOS/dev/XIOS_DEV_CMIP6/src/node/grid.hpp (modified) * XIOS/trunk/src/node/grid.hpp (modified) Correcting grid name in the error message. Wed, 15 Nov 2017 09:48:04 GMT oabramkina [1326] * XIOS/trunk/src/node/field.cpp (modified) Reactivating a grid self-transformation (the case when a field has no ... Mon, 30 Oct 2017 17:16:37 GMT rlacroix [1322] * XIOS/dev/XIOS_DEV_CMIP6/src/node/field.cpp (modified) * XIOS/trunk/src/node/field.cpp (modified) Fix r1321 so that it makes some sense... Polling a constant variable ... Mon, 30 Oct 2017 13:41:06 GMT rlacroix [1321] * XIOS/dev/XIOS_DEV_CMIP6/src/node/field.cpp (modified) * XIOS/trunk/src/node/field.cpp (modified) Improve the check for late data added in r1318. Avoid waiting for data ... Thu, 26 Oct 2017 09:02:16 GMT rlacroix [1319] * XIOS/dev/XIOS_DEV_CMIP6/src/node/field.cpp (modified) * XIOS/trunk/src/node/field.cpp (modified) Fix r1315: The attributes checks were too aggressive and could cause ... Thu, 26 Oct 2017 08:23:17 GMT rlacroix [1318] * XIOS/dev/XIOS_DEV_CMIP6/src/node/context.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/node/context.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/node/field.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/node/field.hpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/node/file.cpp (modified) * XIOS/dev/XIOS_DEV_CMIP6/src/node/file.hpp (modified) * XIOS/trunk/src/node/context.cpp (modified) * XIOS/trunk/src/node/context.hpp (modified) * XIOS/trunk/src/node/field.cpp (modified) * XIOS/trunk/src/node/field.hpp (modified) * XIOS/trunk/src/node/file.cpp (modified) * XIOS/trunk/src/node/file.hpp (modified) Fix: Handle end-of-file correctly for files in read mode. Previously ... Wed, 25 Oct 2017 14:36:53 GMT rlacroix [1315] * XIOS/dev/XIOS_DEV_CMIP6/src/node/field.cpp (modified) * XIOS/trunk/src/node/field.cpp (modified) Fix the default "freq_offset" for fields read from files. Also throw an ... Fri, 13 Oct 2017 15:45:39 GMT oabramkina [1307] * XIOS/trunk/src/node/field.cpp (modified) Backporting r1306 and r1292 to trunk: changes concerned default values ... Fri, 06 Oct 2017 13:19:03 GMT ymipsl [1296] * XIOS/trunk/src/transformation/scalar_algorithm_reduce_axis.cpp (modified) bug fix in axis -> scalar reduction transformation. YM Mon, 02 Oct 2017 08:50:43 GMT oabramkina [1286] * XIOS/trunk/src/filter/temporal_filter.cpp (modified) * XIOS/trunk/src/node/field.cpp (modified) * XIOS/trunk/src/node/field.hpp (modified) * XIOS/trunk/src/node/file.cpp (modified) Backporting r1280 to trunk: adding a check on the field attributes ... Tue, 12 Sep 2017 07:50:10 GMT ymipsl [1262] * XIOS/trunk/src/node/domain.cpp (modified) backport of rev.1259 in trunk. YM Tue, 12 Sep 2017 07:45:29 GMT ymipsl [1261] * XIOS/trunk/src/filter/spatial_transform_filter.cpp (modified) * XIOS/trunk/src/transformation/Functions/average_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/average_reduction.hpp (modified) * XIOS/trunk/src/transformation/Functions/extract.cpp (modified) * XIOS/trunk/src/transformation/Functions/extract.hpp (modified) * XIOS/trunk/src/transformation/Functions/max_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/max_reduction.hpp (modified) * XIOS/trunk/src/transformation/Functions/min_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/min_reduction.hpp (modified) * XIOS/trunk/src/transformation/Functions/reduction.hpp (modified) * XIOS/trunk/src/transformation/Functions/sum_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/sum_reduction.hpp (modified) * XIOS/trunk/src/transformation/axis_algorithm_extract_domain.cpp (modified) * XIOS/trunk/src/transformation/axis_algorithm_extract_domain.hpp (modified) * XIOS/trunk/src/transformation/axis_algorithm_reduce_domain.cpp (modified) * XIOS/trunk/src/transformation/axis_algorithm_reduce_domain.hpp (modified) * XIOS/trunk/src/transformation/generic_algorithm_transformation.cpp (modified) * XIOS/trunk/src/transformation/generic_algorithm_transformation.hpp (modified) * XIOS/trunk/src/transformation/scalar_algorithm_extract_axis.cpp (modified) * XIOS/trunk/src/transformation/scalar_algorithm_extract_axis.hpp (modified) * XIOS/trunk/src/transformation/scalar_algorithm_reduce_axis.cpp (modified) * XIOS/trunk/src/transformation/scalar_algorithm_reduce_axis.hpp (modified) * XIOS/trunk/src/transformation/scalar_algorithm_reduce_domain.cpp (modified) * XIOS/trunk/src/transformation/scalar_algorithm_reduce_domain.hpp (modified) backport of rev1260 in trunk. YM Mon, 11 Sep 2017 07:59:02 GMT ymipsl [1257] * XIOS/trunk/src/io/nc4_data_input.cpp (modified) small bugfix when reading curvilinear domain in file (backport from ... Thu, 07 Sep 2017 13:10:16 GMT rlacroix [1254] * XIOS/trunk/src/context_server.cpp (modified) * XIOS/trunk/src/context_server.hpp (modified) Backport r1225 to trunk: Improve the communication protocol on server ... Wed, 06 Sep 2017 09:03:04 GMT oabramkina [1253] * XIOS/trunk/src/filter/file_writer_filter.cpp (modified) * XIOS/trunk/src/filter/store_filter.cpp (modified) Trunk: fixing a bug in case of activated missing values. If nan values ... Tue, 29 Aug 2017 14:27:44 GMT oabramkina [1247] * XIOS/trunk/src/filter/store_filter.cpp (modified) Trunk: undoing previous commit. Tue, 29 Aug 2017 13:00:35 GMT oabramkina [1245] * XIOS/trunk/src/filter/store_filter.cpp (modified) Trunk: fixing a bug in missing_values. Tue, 11 Jul 2017 16:04:13 GMT rlacroix [1210] * XIOS/dev/dev_olga/src/filter/source_filter.cpp (modified) * XIOS/trunk/src/filter/source_filter.cpp (modified) Fix: The freq_offset was not applied to the end-of-file notification ... Fri, 07 Jul 2017 13:52:44 GMT rlacroix [1200] * XIOS/trunk/src/node/context.cpp (modified) Improve the buffer size estimation. This in fact reverts r1190 but with ... Fri, 07 Jul 2017 12:03:20 GMT aclsce [1199] * XIOS/trunk/src/transformation/axis_algorithm_interpolate.cpp (modified) - Invert test condition to avoid to evaluate NaN. Thu, 06 Jul 2017 14:52:47 GMT rlacroix [1198] * XIOS/trunk/src/context_client.cpp (modified) Fix a stupid mistake in previous commit... Thu, 06 Jul 2017 13:49:19 GMT rlacroix [1197] * XIOS/trunk/src/context_client.cpp (modified) Fix: A floating-point exception could sometimes occur after r1190. Tue, 04 Jul 2017 12:40:33 GMT aclsce [1195] * XIOS/trunk/src/node/file.cpp (modified) - Fixed bug related to offset functionality Mon, 03 Jul 2017 12:34:22 GMT rlacroix [1192] * XIOS/trunk/src/buffer_client.cpp (modified) * XIOS/trunk/src/buffer_client.hpp (modified) * XIOS/trunk/src/context_client.cpp (modified) * XIOS/trunk/src/context_client.hpp (modified) Display a warning message if an event has a size greater than the ... Mon, 03 Jul 2017 12:34:21 GMT rlacroix [1191] * XIOS/trunk/src/node/context.cpp (modified) Do not use the "min_buffer_size" parameter also as maximum event size. ... Mon, 03 Jul 2017 12:34:20 GMT rlacroix [1190] * XIOS/trunk/src/node/context.cpp (modified) Remove an old failsafe mechanism that could hide some buffers ... Fri, 30 Jun 2017 14:22:31 GMT ymipsl [1189] * XIOS/trunk/src/config/file_attribute.conf (modified) * XIOS/trunk/src/node/file.cpp (modified) Add new attribute to manage splitting in file name : - ... Wed, 28 Jun 2017 13:25:20 GMT rlacroix [1186] * XIOS/trunk/src/filter/file_writer_filter.cpp (modified) * XIOS/trunk/src/filter/source_filter.cpp (modified) * XIOS/trunk/src/filter/source_filter.hpp (modified) * XIOS/trunk/src/filter/store_filter.cpp (modified) * XIOS/trunk/src/filter/store_filter.hpp (modified) * XIOS/trunk/src/node/field.cpp (modified) Fix: Ensure "detect_missing_value" is always applied. Missing values ... Fri, 23 Jun 2017 13:01:52 GMT rlacroix [1183] * XIOS/trunk/src/filter/temporal_filter.hpp (modified) Fix corrupted outputs after r1124. Some variables were used before ... Fri, 23 Jun 2017 13:01:47 GMT rlacroix [1182] * XIOS/trunk/doc/XIOS_reference_guide.lyx (modified) * XIOS/trunk/doc/XIOS_reference_guide.pdf (modified) * XIOS/trunk/doc/XIOS_user_guide.lyx (modified) * XIOS/trunk/doc/XIOS_user_guide.pdf (modified) Update the documentation. Document the "xios_field_is_active" function ... Fri, 23 Jun 2017 13:01:41 GMT rlacroix [1181] * XIOS/trunk/src/config/field_attribute.conf (modified) * XIOS/trunk/src/interface/c_attr/icfield_attr.cpp (modified) * XIOS/trunk/src/interface/c_attr/icfieldgroup_attr.cpp (modified) * XIOS/trunk/src/interface/fortran_attr/field_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/fieldgroup_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/ifield_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/ifieldgroup_attr.F90 (modified) * XIOS/trunk/src/node/field.cpp (modified) * XIOS/trunk/src/node/field_impl.hpp (modified) Add a new field attribut "check_if_active". If this attribut is set to ... Thu, 15 Jun 2017 14:17:12 GMT mhnguyen [1171] * XIOS/trunk/doc/XIOS_reference_guide.pdf (modified) * XIOS/trunk/doc/inputs/reference/Transformations.lyx (modified) Update reference guide Thu, 15 Jun 2017 14:17:07 GMT mhnguyen [1170] * XIOS/trunk/src/interface/c_attr/icfile_attr.cpp (modified) * XIOS/trunk/src/interface/c_attr/icfilegroup_attr.cpp (modified) * XIOS/trunk/src/interface/c_attr/icinterpolate_domain_attr.cpp (modified) * XIOS/trunk/src/interface/c_attr/iczoom_axis_attr.cpp (modified) * XIOS/trunk/src/interface/fortran_attr/file_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/filegroup_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/ifile_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/ifilegroup_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/iinterpolate_domain_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/interpolate_domain_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/izoom_axis_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/zoom_axis_interface_attr.F90 (modified) Update Fortran interface. Thu, 15 Jun 2017 14:17:01 GMT mhnguyen [1169] * XIOS/trunk/bld.cfg (modified) * XIOS/trunk/inputs/COMPLETE/context_atmosphere.xml (modified) * XIOS/trunk/src/config/axis_attribute_private.conf (modified) * XIOS/trunk/src/config/zoom_axis_attribute.conf (modified) * XIOS/trunk/src/distribution_server.cpp (modified) * XIOS/trunk/src/distribution_server.hpp (modified) * XIOS/trunk/src/io/nc4_data_output.cpp (modified) * XIOS/trunk/src/node/axis.cpp (modified) * XIOS/trunk/src/node/axis.hpp (modified) * XIOS/trunk/src/node/grid.cpp (modified) * XIOS/trunk/src/node/zoom_axis.cpp (modified) * XIOS/trunk/src/transformation/axis_algorithm_zoom.cpp (modified) * XIOS/trunk/src/transformation/axis_algorithm_zoom.hpp (modified) Non-continuous zoom on axis Zoomed points are defined by array index of ... Thu, 08 Jun 2017 14:57:44 GMT ymipsl [1163] * XIOS/trunk/src/transformation/domain_algorithm_interpolate.cpp (modified) * XIOS/trunk/src/transformation/domain_algorithm_interpolate.hpp (modified) Bug fix when using domain interpolation to a destination domain with ... Tue, 06 Jun 2017 08:53:33 GMT mhnguyen [1154] * XIOS/trunk/src/transformation/Functions/average_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/max_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/min_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/sum_reduction.cpp (modified) * XIOS/trunk/src/transformation/generic_algorithm_transformation.cpp (modified) Correcting a bug: activating detect_missing_value on field source ... Fri, 19 May 2017 08:45:40 GMT yushan [1140] * XIOS/trunk/Doxyfile (modified) * XIOS/trunk/bld.cfg (modified) * XIOS/trunk/extern/remap/src/mapper.cpp (modified) test_remap back to work Thu, 18 May 2017 15:26:56 GMT ymipsl [1137] * XIOS/trunk/make_xios (modified) * XIOS/trunk/src/cxios.cpp (modified) * XIOS/trunk/src/memtrack.cpp (modified) * XIOS/trunk/src/memtrack.hpp (modified) * XIOS/trunk/src/node/context.cpp (modified) Add "light" memory tracking which must be activated at compile time : ... Wed, 17 May 2017 09:02:34 GMT ymipsl [1135] * XIOS/trunk/src/client.cpp (modified) * XIOS/trunk/src/config/file_attribute.conf (modified) * XIOS/trunk/src/io/nc4_data_output.cpp (modified) * XIOS/trunk/src/io/onetcdf4.cpp (modified) * XIOS/trunk/src/io/onetcdf4.hpp (modified) * XIOS/trunk/src/io/onetcdf4_impl.hpp (modified) * XIOS/trunk/src/node/context.cpp (modified) * XIOS/trunk/src/node/field.cpp (modified) * XIOS/trunk/src/node/file.cpp (modified) * XIOS/trunk/src/server.cpp (modified) * XIOS/trunk/src/timer.cpp (modified) * XIOS/trunk/src/timer.hpp (modified) - Add new timer for better profiling. The full timer output will be ... Fri, 05 May 2017 06:58:38 GMT rlacroix [1125] * XIOS/trunk/inputs/TOYSTEPHANE (deleted) Remove a file that was mistakenly commited. Fri, 05 May 2017 06:58:37 GMT rlacroix [1124] * XIOS/trunk/src/filter/temporal_filter.cpp (modified) * XIOS/trunk/src/filter/temporal_filter.hpp (modified) Temporal filters: Avoid intermediate copies whenever possible for once ... Fri, 05 May 2017 06:58:36 GMT rlacroix [1123] * XIOS/trunk/src/filter/temporal_filter.cpp (modified) * XIOS/trunk/src/filter/temporal_filter.hpp (modified) Instant filter: Optimize the sampling when it is easy to do so. This ... Fri, 05 May 2017 06:58:36 GMT rlacroix [1122] * XIOS/trunk/src/filter/temporal_filter.cpp (modified) * XIOS/trunk/src/filter/temporal_filter.hpp (modified) CTemporalFilter: Improve const-correctness. Fri, 05 May 2017 06:58:35 GMT rlacroix [1121] * XIOS/trunk/src/filter/temporal_filter.cpp (modified) Temporal filters: In some rare cases data could be output at a wrong ... Fri, 05 May 2017 06:58:34 GMT rlacroix [1120] * XIOS/trunk/src/node/field.cpp (modified) Add some error checking for xios_field_is_active. It does not make ... Fri, 05 May 2017 06:58:33 GMT rlacroix [1119] * XIOS/trunk/src/filter/file_writer_filter.cpp (modified) * XIOS/trunk/src/filter/file_writer_filter.hpp (modified) * XIOS/trunk/src/filter/filter.cpp (modified) * XIOS/trunk/src/filter/filter.hpp (modified) * XIOS/trunk/src/filter/input_pin.hpp (modified) * XIOS/trunk/src/filter/output_pin.cpp (modified) * XIOS/trunk/src/filter/output_pin.hpp (modified) * XIOS/trunk/src/filter/store_filter.cpp (modified) * XIOS/trunk/src/filter/store_filter.hpp (modified) * XIOS/trunk/src/filter/temporal_filter.cpp (modified) * XIOS/trunk/src/filter/temporal_filter.hpp (modified) * XIOS/trunk/src/interface/c/icfield.cpp (modified) * XIOS/trunk/src/interface/fortran/field_interface.f90 (modified) * XIOS/trunk/src/interface/fortran/ifield.F90 (modified) * XIOS/trunk/src/node/field.cpp (modified) * XIOS/trunk/src/node/field.hpp (modified) Add the ability to check if an output field is active at the current ... Thu, 04 May 2017 13:14:41 GMT mhnguyen [1118] * XIOS/trunk/bld.cfg (modified) * XIOS/trunk/inputs/TOY (added) * XIOS/trunk/inputs/TOY/arpege_fields.xml (added) * XIOS/trunk/inputs/TOY/arpsfx_files.xml (added) * XIOS/trunk/inputs/TOY/context_arpsf.xml (added) * XIOS/trunk/inputs/TOY/context_nem.xml (added) * XIOS/trunk/inputs/TOY/iodef.xml (added) * XIOS/trunk/inputs/TOY/param.def (added) * XIOS/trunk/inputs/TOY/surfex_fields.xml (added) * XIOS/trunk/inputs/TOYSTEPHANE (added) * XIOS/trunk/inputs/TOYSTEPHANE/.fuse_hidden0000270f00000001 (added) * XIOS/trunk/src/test/toy_cmip6.f90 (added) Adding toy_cmip6 into repository Thu, 04 May 2017 13:14:37 GMT mhnguyen [1117] * XIOS/trunk/src/attribute_map.cpp (modified) * XIOS/trunk/src/attribute_map.hpp (modified) * XIOS/trunk/src/attribute_template.hpp (modified) * XIOS/trunk/src/attribute_template_impl.hpp (modified) * XIOS/trunk/src/node/axis.cpp (modified) * XIOS/trunk/src/node/domain.cpp (modified) * XIOS/trunk/src/node/scalar.cpp (modified) * XIOS/trunk/src/object_template.hpp (modified) * XIOS/trunk/src/object_template_impl.hpp (modified) Fixing bug of using *_ref on chaining transformations. +) Correct ... Wed, 03 May 2017 13:07:53 GMT ymipsl [1114] * XIOS/trunk/extern/remap/src/mapper.cpp (modified) * XIOS/trunk/extern/remap/src/mapper.hpp (modified) * XIOS/trunk/src/config/interpolate_domain_attribute.conf (modified) * XIOS/trunk/src/transformation/domain_algorithm_interpolate.cpp (modified) Add conservative remapping option for quantity, ie, the integrated value ... Wed, 03 May 2017 13:02:15 GMT ymipsl [1113] * XIOS/trunk/src/transformation/domain_algorithm_expand.cpp (modified) Small bug fix in expand algorithm. YM Wed, 03 May 2017 12:59:25 GMT ymipsl [1112] * XIOS/trunk/src/attribute.cpp (modified) * XIOS/trunk/src/attribute.hpp (modified) * XIOS/trunk/src/attribute_array.hpp (modified) * XIOS/trunk/src/attribute_array_impl.hpp (modified) * XIOS/trunk/src/attribute_enum.hpp (modified) * XIOS/trunk/src/attribute_enum_impl.hpp (modified) * XIOS/trunk/src/attribute_map.cpp (modified) * XIOS/trunk/src/attribute_template.hpp (modified) * XIOS/trunk/src/attribute_template_impl.hpp (modified) For xml : if attribute get the string value of "_reset_", attribute will ... Wed, 03 May 2017 12:30:23 GMT ymipsl [1111] * XIOS/trunk/src/array_new.hpp (modified) Bug fix on "== operator" method for CArray YM Wed, 26 Apr 2017 15:40:16 GMT ymipsl [1108] * XIOS/trunk/src/io/nc4_data_output.cpp (modified) Bug fix in append mode : when replay same period with only one temporal ... Tue, 25 Apr 2017 08:57:59 GMT mhnguyen [1107] * XIOS/trunk/src/attribute.cpp (modified) * XIOS/trunk/src/attribute_array.hpp (modified) * XIOS/trunk/src/attribute_enum.hpp (modified) * XIOS/trunk/src/type/enum.hpp (modified) * XIOS/trunk/src/type/type.hpp (modified) * XIOS/trunk/src/type/type_decl.cpp (modified) Clean up some compilation warnings Tue, 25 Apr 2017 08:57:55 GMT mhnguyen [1106] * XIOS/trunk/src/node/axis.cpp (modified) * XIOS/trunk/src/node/axis.hpp (modified) * XIOS/trunk/src/node/domain.cpp (modified) * XIOS/trunk/src/node/domain.hpp (modified) * XIOS/trunk/src/node/scalar.cpp (modified) * XIOS/trunk/src/node/scalar.hpp (modified) * XIOS/trunk/src/transformation/grid_transformation_selector.cpp (modified) Fixing bug of referencing to an object. +) From now on, two objects of ... Tue, 25 Apr 2017 08:57:48 GMT mhnguyen [1105] * XIOS/trunk/src/array_new.hpp (modified) * XIOS/trunk/src/attribute.hpp (modified) * XIOS/trunk/src/attribute_array.hpp (modified) * XIOS/trunk/src/attribute_array_impl.hpp (modified) * XIOS/trunk/src/attribute_enum.hpp (modified) * XIOS/trunk/src/attribute_enum_impl.hpp (modified) * XIOS/trunk/src/attribute_map.cpp (modified) * XIOS/trunk/src/attribute_map.hpp (modified) * XIOS/trunk/src/attribute_template.hpp (modified) * XIOS/trunk/src/attribute_template_impl.hpp (modified) * XIOS/trunk/src/date.cpp (modified) * XIOS/trunk/src/date.hpp (modified) * XIOS/trunk/src/duration.cpp (modified) * XIOS/trunk/src/duration.hpp (modified) * XIOS/trunk/src/object_template.hpp (modified) * XIOS/trunk/src/object_template_impl.hpp (modified) * XIOS/trunk/src/type/enum.hpp (modified) * XIOS/trunk/src/type/enum_impl.hpp (modified) * XIOS/trunk/src/type/enum_ref_impl.hpp (modified) * XIOS/trunk/src/type/type.hpp (modified) * XIOS/trunk/src/type/type_decl.cpp (modified) * XIOS/trunk/src/type/type_impl.hpp (modified) * XIOS/trunk/src/type/type_ref_impl.hpp (modified) Adding comparison operator between objects of XIOS. Two objects of a ... Tue, 25 Apr 2017 08:57:42 GMT mhnguyen [1104] * XIOS/trunk/src/transformation/generic_algorithm_transformation.cpp (modified) Fixing a bug of detect missing value on sequence of transformation. +) ... Wed, 19 Apr 2017 14:20:40 GMT mhnguyen [1100] * XIOS/trunk/inputs/REMAP/output_src_curvilinear.nc (added) * XIOS/trunk/inputs/REMAP/output_src_regular.nc (added) * XIOS/trunk/inputs/REMAP/output_src_unstructured.nc (added) Some files for reading in test_remap Fri, 14 Apr 2017 13:40:08 GMT ymipsl [1098] * XIOS/trunk/src/node/file.cpp (modified) Enhancement : in file attribut ts_prefix, the substring "%file_name%", ... Fri, 14 Apr 2017 12:34:32 GMT ymipsl [1097] * XIOS/trunk/src/io/nc4_data_output.cpp (modified) * XIOS/trunk/src/io/onetcdf4.cpp (modified) * XIOS/trunk/src/io/onetcdf4.hpp (modified) Expected performance enhancement when using append mode. Instead to read ... Fri, 14 Apr 2017 09:18:27 GMT ymipsl [1096] * XIOS/trunk/src/config/file_attribute.conf (modified) * XIOS/trunk/src/data_output.cpp (modified) * XIOS/trunk/src/data_output.hpp (modified) * XIOS/trunk/src/io/nc4_data_output.cpp (modified) * XIOS/trunk/src/io/nc4_data_output.hpp (modified) * XIOS/trunk/src/node/file.cpp (modified) Enhancement : Add new functionnalites for file attribute "time_counter" ... Thu, 13 Apr 2017 11:19:49 GMT rlacroix [1093] * XIOS/trunk/src/node/grid.cpp (modified) Fix some bugs when using indexed output. The grid was mistakenly ... Thu, 13 Apr 2017 09:41:43 GMT ymipsl [1092] * XIOS/trunk/src/node/file.cpp (modified) Bug fix in append mode when file are split with different period. ... Wed, 12 Apr 2017 17:05:14 GMT ymipsl [1091] * XIOS/trunk/src/node/context.cpp (modified) Enhancement : in file attribut ts_prefix, the substring "%file_name%", ... Wed, 12 Apr 2017 15:39:10 GMT ymipsl [1090] * XIOS/trunk/src/node/file.cpp (modified) * XIOS/trunk/src/node/file.hpp (modified) Bug fix in append mode when file are split with different period. -> ... Mon, 10 Apr 2017 16:46:02 GMT mhnguyen [1084] * XIOS/trunk/doc/XIOS_reference_guide.lyx (modified) * XIOS/trunk/doc/XIOS_reference_guide.pdf (modified) * XIOS/trunk/doc/XIOS_user_guide.lyx (modified) * XIOS/trunk/doc/XIOS_user_guide.pdf (modified) * XIOS/trunk/doc/inputs/reference (added) * XIOS/trunk/doc/inputs/reference/Transformations.lyx (added) * XIOS/trunk/doc/inputs/user/Axis.lyx (modified) * XIOS/trunk/doc/inputs/user/Domain.lyx (modified) * XIOS/trunk/doc/inputs/user/Grid.lyx (modified) * XIOS/trunk/doc/inputs/user/Scalar.lyx (added) * XIOS/trunk/doc/inputs/user/Transformations.lyx (added) Update user guide and reference guide Fri, 07 Apr 2017 15:30:28 GMT mhnguyen [1083] * XIOS/trunk/bld.cfg (modified) * XIOS/trunk/inputs/EXPAND_DOMAIN (added) * XIOS/trunk/inputs/EXPAND_DOMAIN/iodef.xml (added) * XIOS/trunk/src/test/test_expand_domain.f90 (added) * XIOS/trunk/src/transformation/domain_algorithm_expand.cpp (modified) Correcting the bug on expanding domain by using data read from file +) ... Tue, 04 Apr 2017 13:16:05 GMT aclsce [1082] * XIOS/trunk/src/transformation/scalar_algorithm_reduce_axis.cpp (modified) * XIOS/trunk/src/transformation/scalar_algorithm_reduce_axis.hpp (modified) - Fixed bug with axis reduction Tested on Ada machine Fri, 17 Mar 2017 15:02:40 GMT mhnguyen [1078] * XIOS/trunk/bld.cfg (modified) * XIOS/trunk/inputs/CONNECTIVITY (added) * XIOS/trunk/inputs/CONNECTIVITY/iodef.xml (added) * XIOS/trunk/inputs/CONNECTIVITY/test.xml (added) * XIOS/trunk/src/config/expand_domain_attribute.conf (modified) * XIOS/trunk/src/interface/c_attr/icexpand_domain_attr.cpp (modified) * XIOS/trunk/src/interface/fortran_attr/expand_domain_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/iexpand_domain_attr.F90 (modified) * XIOS/trunk/src/node/domain.cpp (modified) * XIOS/trunk/src/node/domain.hpp (modified) * XIOS/trunk/src/node/expand_domain.cpp (modified) * XIOS/trunk/src/node/grid.cpp (modified) * XIOS/trunk/src/node/grid.hpp (modified) * XIOS/trunk/src/test/test_connectivity_expand.f90 (added) * XIOS/trunk/src/transformation/domain_algorithm_expand.cpp (modified) * XIOS/trunk/src/transformation/domain_algorithm_expand.hpp (modified) * XIOS/trunk/src/transformation/grid_transformation.cpp (modified) Adding rectilinear and curvilinear domain for expand_domain ... Thu, 16 Mar 2017 14:04:53 GMT mhnguyen [1076] * XIOS/trunk/inputs/REMAP/iodef.xml (modified) * XIOS/trunk/src/filter/spatial_transform_filter.cpp (modified) * XIOS/trunk/src/test/test_remap.f90 (modified) * XIOS/trunk/src/transformation/Functions/average_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/average_reduction.hpp (modified) * XIOS/trunk/src/transformation/Functions/extract.cpp (modified) * XIOS/trunk/src/transformation/Functions/extract.hpp (modified) * XIOS/trunk/src/transformation/Functions/max_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/max_reduction.hpp (modified) * XIOS/trunk/src/transformation/Functions/min_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/min_reduction.hpp (modified) * XIOS/trunk/src/transformation/Functions/reduction.hpp (modified) * XIOS/trunk/src/transformation/Functions/sum_reduction.cpp (modified) * XIOS/trunk/src/transformation/Functions/sum_reduction.hpp (modified) * XIOS/trunk/src/transformation/axis_algorithm_extract_domain.cpp (modified) * XIOS/trunk/src/transformation/axis_algorithm_extract_domain.hpp (modified) * XIOS/trunk/src/transformation/axis_algorithm_reduce_domain.cpp (modified) * XIOS/trunk/src/transformation/axis_algorithm_reduce_domain.hpp (modified) * XIOS/trunk/src/transformation/generic_algorithm_transformation.cpp (modified) * XIOS/trunk/src/transformation/generic_algorithm_transformation.hpp (modified) * XIOS/trunk/src/transformation/scalar_algorithm_extract_axis.cpp (modified) * XIOS/trunk/src/transformation/scalar_algorithm_extract_axis.hpp (modified) * XIOS/trunk/src/transformation/scalar_algorithm_reduce_domain.cpp (modified) * XIOS/trunk/src/transformation/scalar_algorithm_reduce_domain.hpp (modified) Correcting behavior of detecting_missing_value: - Missing value ... Thu, 16 Mar 2017 14:04:46 GMT mhnguyen [1075] * XIOS/trunk/src/node/variable.cpp (modified) Improving error message of variable parsing Fri, 03 Mar 2017 13:20:39 GMT ymipsl [1066] * XIOS/trunk/extern/remap/src/tree.cpp (modified) Bug fix : in some interpolation with mask on source grid and with some ... Thu, 02 Mar 2017 09:53:59 GMT mhnguyen [1065] * XIOS/trunk/tools/archive/boost.tar.gz (added) Pushing archive file mistakenly deleted in the previous commit. Thu, 02 Mar 2017 09:42:39 GMT mhnguyen [1064] * XIOS/trunk/inputs/REMAP/iodef.xml (modified) * XIOS/trunk/src/config/domain_attribute_private.conf (modified) * XIOS/trunk/src/io/nc4_data_input.cpp (modified) * XIOS/trunk/src/node/domain.cpp (modified) * XIOS/trunk/src/node/domain.hpp (modified) * XIOS/trunk/src/test/test_remap.f90 (modified) * XIOS/trunk/src/transformation/domain_algorithm_generate_rectilinear.cpp (modified) * XIOS/trunk/tools/archive/boost.tar.gz (deleted) Auto-distribution of unstructured grid read from a file. + Unstructured ... Thu, 23 Feb 2017 16:32:17 GMT ymipsl [1062] * XIOS/trunk/src/node/domain.cpp (modified) Bug fix in interpolation for cell boundaries generation. YM Thu, 23 Feb 2017 16:25:22 GMT ymipsl [1061] * XIOS/trunk/src/io/nc4_data_output.cpp (modified) Bug fix in append mode when time_counter was of type "record" YM Thu, 23 Feb 2017 12:32:32 GMT ymipsl [1059] * XIOS/trunk/src/io/nc4_data_output.cpp (modified) Solve issue in append mode : the time_counter and time_counter_bounds ... Tue, 07 Feb 2017 11:00:27 GMT ymipsl [1052] * XIOS/trunk/src/interface/c_attr/icaxis_attr.cpp (modified) * XIOS/trunk/src/interface/c_attr/icaxisgroup_attr.cpp (modified) * XIOS/trunk/src/interface/c_attr/icdomain_attr.cpp (modified) * XIOS/trunk/src/interface/c_attr/icdomaingroup_attr.cpp (modified) * XIOS/trunk/src/interface/c_attr/icfile_attr.cpp (modified) * XIOS/trunk/src/interface/c_attr/icfilegroup_attr.cpp (modified) * XIOS/trunk/src/interface/c_attr/icscalar_attr.cpp (modified) * XIOS/trunk/src/interface/c_attr/icscalargroup_attr.cpp (modified) * XIOS/trunk/src/interface/fortran_attr/axis_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/axisgroup_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/domain_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/domaingroup_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/file_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/filegroup_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/iaxis_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/iaxisgroup_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/idomain_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/idomaingroup_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/ifile_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/ifilegroup_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/iscalar_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/iscalargroup_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/scalar_interface_attr.F90 (modified) * XIOS/trunk/src/interface/fortran_attr/scalargroup_interface_attr.F90 (modified) Generate fortran interface for new attributes from previous commit. YM Tue, 07 Feb 2017 10:53:12 GMT ymipsl [1051] * XIOS/trunk/src/xios_spl.hpp (modified) - Add label attribute for axis - if label attribute is present, then ...