1 | #!/bin/ksh |
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2 | #************************************************************** |
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3 | # Author: Martial Mancip |
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4 | # Contact: Martial.Mancip__at__ipsl.jussieu.fr |
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5 | # $Revision:: $ Revision of last commit |
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6 | # $Author:: $ Author of last commit |
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7 | # $Date:: $ Date of last commit |
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8 | # IPSL (2006) |
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9 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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10 | # |
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11 | #************************************************************** |
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12 | # ID of your genci project. Curie only : post-processing jobs need it to run properly |
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13 | #-Q- curie export BRIDGE_MSUB_PROJECT=::default_project:: |
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14 | #-Q- irene export BRIDGE_MSUB_PROJECT=::default_project:: |
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15 | #-Q- irene-amd export BRIDGE_MSUB_PROJECT=::default_project:: |
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16 | |
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17 | #set -eu |
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18 | #set -vx |
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19 | |
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20 | libIGCM=::modipsl::/libIGCM |
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21 | |
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22 | #D- Task type DO NOT CHANGE (computing, post-processing or checking) |
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23 | TaskType=post-processing |
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24 | |
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25 | #D--------------------------------------------------------------------== |
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26 | #D- -1. User modification place |
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27 | #D--------------------------------------------------------------------== |
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28 | |
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29 | #D- Increased verbosity (1, 2, 3) |
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30 | Verbosity=3 |
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31 | |
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32 | #D- Low level debug : to bypass lib test checks and stack construction |
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33 | #D- Default=true |
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34 | DEBUG_debug=false |
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35 | |
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36 | #D--------------------------------------------------------------------== |
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37 | |
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38 | echo "clean latest PackPeriod script :" |
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39 | echo "Script used to clean a Pack Period from the IGCM_OUT directory !" |
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40 | echo "This script will erase files !!! Be careful and read all informations !" |
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41 | echo "----" |
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42 | echo "It must be called in Experience directory (so-called SUBMIT_DIR)." |
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43 | echo "----" |
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44 | |
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45 | #D--------------------------------------------------------------------== |
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46 | |
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47 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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48 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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49 | . ${libIGCM}/libIGCM_date/libIGCM_date.ksh |
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50 | #------- |
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51 | SUBMIT_DIR=$( pwd ) |
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52 | . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh |
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53 | . ${libIGCM}/libIGCM_config/libIGCM_config.ksh |
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54 | #------- |
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55 | ( ${DEBUG_debug} ) && IGCM_debug_Check |
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56 | ( ${DEBUG_debug} ) && IGCM_card_Check |
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57 | ( ${DEBUG_debug} ) && IGCM_date_Check |
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58 | |
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59 | #================================== |
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60 | # First of all |
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61 | # |
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62 | # Read libIGCM compatibility version in config.card |
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63 | # Read UserChoices section |
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64 | # Read Ensemble section |
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65 | # Read Post section |
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66 | # Define all netcdf output directories |
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67 | #================================== |
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68 | IGCM_config_CommonConfiguration ${SUBMIT_DIR}/config.card |
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69 | |
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70 | #================================== |
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71 | # Define default value to keep compatibility with previous card: means before changes due to TGCC |
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72 | if [ X${PackDefault} = Xtrue ] ; then |
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73 | [ X${config_Post_PackFrequency} = X ] && config_Post_PackFrequency=${config_Post_RebuildFrequency} |
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74 | else |
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75 | config_Post_PackFrequency=NONE |
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76 | fi |
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77 | |
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78 | #================================== |
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79 | # Is the pack active |
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80 | if ( [ ! X${config_Post_PackFrequency} = X${NULL_STR} ] && \ |
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81 | [ ! X${config_Post_PackFrequency} = XNONE ] ) ; then |
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82 | Pack=true |
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83 | fi |
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84 | |
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85 | IGCM_sys_TestDirArchive ${R_SAVE} |
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86 | [ $? != 0 ] && IGCM_debug_Exit "IGCM_sys_TestDirArchive" |
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87 | |
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88 | if [ ! -f ${SUBMIT_DIR}/run.card ]; then |
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89 | echo "You seem NOT to have a run.card in this directory !!" |
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90 | echo "This script will fail because it doesn't know what to do without run.card available." |
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91 | exit 1 |
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92 | fi |
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93 | |
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94 | #===================================# |
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95 | # Read updated run.card # |
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96 | #===================================# |
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97 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration PeriodState |
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98 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration PeriodDateBegin |
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99 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration PeriodDateEnd |
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100 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration CumulPeriod |
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101 | if [ X${run_Configuration_CumulPeriod} == X ] ; then |
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102 | ${run_Configuration_CumulPeriod} = 0 |
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103 | fi |
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104 | |
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105 | PreviousPeriodDateBegin=$( IGCM_date_ConvertFormatToGregorian ${run_Configuration_PeriodDateBegin} ) |
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106 | PreviousPeriodDateEnd=$( IGCM_date_ConvertFormatToGregorian ${run_Configuration_PeriodDateEnd} ) |
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107 | |
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108 | IGCM_date_GetYearMonth ${PreviousPeriodDateEnd} PreviousPeriodYear PreviousPeriodMonth |
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109 | |
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110 | if [ $# == 1 ] ; then |
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111 | if [ ${#1} != 4 ] ; then |
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112 | echo "You must give a year (SSAA) as argument." |
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113 | exit 1 |
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114 | fi |
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115 | ReferenceYear=$1 |
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116 | else |
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117 | ReferenceYear=${PreviousPeriodYear} |
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118 | fi |
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119 | RemovedPeriods=0 |
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120 | |
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121 | # Colors |
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122 | Red="\033[1;31m" |
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123 | Green="\033[1;32m" |
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124 | NoColor="\033[0m" |
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125 | |
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126 | while [ ${PreviousPeriodYear} -ge ${ReferenceYear} ] ; do |
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127 | |
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128 | PeriodDateEnd=${PreviousPeriodDateEnd} |
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129 | PeriodDateBegin=${PreviousPeriodDateBegin} |
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130 | PeriodYear=${PreviousPeriodYear} |
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131 | PeriodMonth=${PreviousPeriodMonth} |
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132 | |
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133 | echo "Search files with ${PeriodDateEnd} in ${R_SAVE}" |
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134 | unset ListFiles |
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135 | set +A ListFiles -- $( IGCM_sys_RshArchive "find ${R_SAVE} -name \"*${PeriodDateEnd}*\" " ) |
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136 | CountListFiles=${#ListFiles[@]} |
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137 | |
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138 | if [ X${Pack} = Xtrue ] ; then |
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139 | echo "Search files with ${PeriodDateEnd} in ${R_BUFR}" |
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140 | unset ListFilesBuf |
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141 | set +A ListFilesBuf -- $( IGCM_sys_RshMaster "find ${R_BUFR} -name \"*${PeriodDateEnd}*\" " ) |
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142 | CountListFilesBuf=${#ListFilesBuf[@]} |
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143 | else |
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144 | CountListFilesBuf=0 |
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145 | fi |
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146 | |
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147 | # If exist, erase REBUILD DIR |
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148 | CountRebuildDir=0 |
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149 | if [ X${config_Post_RebuildFrequency} != X ] ; then |
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150 | echo "Search directories with ${PeriodDateBegin} in REBUILD_DIR" |
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151 | unset RebuildDir |
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152 | set +A RebuildDir -- $( find ${REBUILD_DIR} -type d -name "*${PeriodDateBegin}*" ) |
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153 | CountRebuildDir=${#RebuildDir[@]} |
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154 | fi |
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155 | |
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156 | |
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157 | if ( [ ${CountListFiles} -gt 0 ] || [ ${CountListFilesBuf} -gt 0 ] ) ; then |
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158 | IGCM_debug_Print 1 "Number of files to be erased from ${R_SAVE} : ${CountListFiles}." |
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159 | for file in ${ListFiles[@]} ; do |
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160 | IGCM_debug_Print 2 -e "${Red} ${file}${NoColor}" |
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161 | done |
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162 | if [ X${Pack} = Xtrue ] ; then |
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163 | IGCM_debug_Print 1 "Number of files to be erased from ${R_BUFR} : ${CountListFilesBuf}." |
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164 | for file in ${ListFilesBuf[@]} ; do |
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165 | IGCM_debug_Print 2 -e "${Red} ${file}${NoColor}" |
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166 | done |
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167 | fi |
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168 | |
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169 | echo -e "${Green}Do you REALLY want to erase all those files ?" |
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170 | echo -n -e " Your answer (y/n) : ${NoColor}" |
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171 | |
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172 | read reponse |
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173 | case ${reponse} in |
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174 | oui|OUI|o|y|yes|YES) |
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175 | echo "OK. It will be erased." |
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176 | IGCM_sys_RshArchive "find ${R_SAVE} -name \"*${PeriodDateEnd}*\" -exec rm -f '{}' \;" |
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177 | if [ X${Pack} = Xtrue ] ; then |
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178 | IGCM_sys_RshMaster "find ${R_BUFR} -name \"*${PeriodDateEnd}*\" -exec rm -f '{}' \;" |
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179 | fi |
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180 | echo "done." |
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181 | ;; |
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182 | non|NON|n|no|NO) |
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183 | echo "Nothing to do !" |
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184 | ;; |
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185 | esac |
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186 | fi |
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187 | |
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188 | if [ ${CountRebuildDir} -gt 0 ] ; then |
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189 | IGCM_debug_Print 1 "Number of REBUILD Dirs to be erased : ${CountRebuildDir}." |
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190 | for Dir in ${RebuildDir[@]} ; do |
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191 | IGCM_debug_Print 2 -e "${Red} ${Dir}${NoColor}" |
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192 | done |
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193 | |
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194 | echo -e "${Green}Do you REALLY want to erase all those Directories ?" |
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195 | echo -n -e " Your answer (y/n) : ${NoColor}" |
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196 | |
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197 | read reponse |
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198 | case ${reponse} in |
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199 | |
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200 | oui|OUI|o|y|yes|YES) |
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201 | echo "OK. It will be erased." |
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202 | find ${REBUILD_DIR} -type d -name "*${PeriodDateBegin}*" -exec rm -Rf '{}' \; |
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203 | echo "done." |
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204 | ;; |
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205 | non|NON|n|no|NO) |
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206 | echo "Nothing to do !" |
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207 | ;; |
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208 | esac |
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209 | fi |
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210 | |
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211 | (( RemovedPeriods = ${RemovedPeriods} + 1 )) |
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212 | |
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213 | # Get previous period begin and end dates |
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214 | PreviousPeriodDateEnd=$( IGCM_date_AddDaysToGregorianDate ${PeriodDateBegin} -1 ) |
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215 | Length=$( IGCM_date_DaysInPreviousPeriod ${PreviousPeriodDateEnd} ${config_UserChoices_PeriodLength} ) |
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216 | echo "PreviousPeriodDateEnd, Length : $Length $PreviousPeriodDateEnd" |
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217 | PreviousPeriodDateBegin=$( IGCM_date_AddDaysToGregorianDate ${PreviousPeriodDateEnd} -$(( Length - 1 )) ) |
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218 | echo "PreviousPeriodDateBegin PreviousPeriodDateEnd :" $PreviousPeriodDateBegin $PreviousPeriodDateEnd |
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219 | IGCM_date_GetYearMonth ${PreviousPeriodDateEnd} PreviousPeriodYear PreviousPeriodMonth |
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220 | |
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221 | done |
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222 | |
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223 | if [ ${RemovedPeriods} == 0 ] ; then |
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224 | echo "Nothing done, exit" |
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225 | exit 0 |
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226 | fi |
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227 | |
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228 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration PeriodState |
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229 | if ( [ ${run_Configuration_PeriodState} != "Running" ] && \ |
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230 | [ ${run_Configuration_PeriodState} != "Continue" ] ) ; then |
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231 | |
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232 | (( NewCumulPeriod = ${run_Configuration_CumulPeriod} - ${RemovedPeriods} + 1 )) |
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233 | |
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234 | if [ ${NewCumulPeriod} -le 1 ] ; then |
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235 | RemoveRunCard=true |
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236 | else |
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237 | RemoveRunCard=false |
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238 | fi |
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239 | |
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240 | Suffix=$( printf '%06i' ${NewCumulPeriod} ) |
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241 | |
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242 | printf "${Green}Your run.card and Job_${config_UserChoices_JobName} will now be updated\n" |
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243 | printf " - PeriodState = OnQueue ;\n" |
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244 | printf " - PeriodDateBegin, PeriodDateEnd and CumulPeriod ;\n" |
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245 | printf " %-10s %-10s %6i\n" \ |
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246 | $( IGCM_date_HumanDigit ${PeriodDateBegin} ) \ |
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247 | $( IGCM_date_HumanDigit ${PeriodDateEnd} ) \ |
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248 | ${NewCumulPeriod} |
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249 | printf " - ScriptOutput = %s" \ |
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250 | "Script_Output_${config_UserChoices_JobName}.${Suffix}" |
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251 | printf " Are you OK ? (y/n) ${NoColor}" |
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252 | |
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253 | read reponse |
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254 | case ${reponse} in |
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255 | oui|OUI|o|y|yes|YES) |
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256 | if ( ${RemoveRunCard} ) ; then |
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257 | echo "CumulPeriod=1 so we erase run.card to start properly." |
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258 | IGCM_sys_Rm ${SUBMIT_DIR}/run.card |
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259 | else |
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260 | # Update run.card |
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261 | cp ${SUBMIT_DIR}/run.card ${SUBMIT_DIR}/run.card.old |
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262 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card Configuration PeriodState "OnQueue" |
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263 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card Configuration CumulPeriod ${NewCumulPeriod} |
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264 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card Configuration PeriodDateBegin \ |
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265 | $( IGCM_date_HumanDigit ${PeriodDateBegin} ) |
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266 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card Configuration PeriodDateEnd \ |
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267 | $( IGCM_date_HumanDigit ${PeriodDateEnd} ) |
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268 | # Update job |
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269 | cp Job_${config_UserChoices_JobName} Job_${config_UserChoices_JobName}.old |
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270 | sed -e "s/\(#.*Script_Output_${config_UserChoices_JobName}\.\)\([0-9]*\)\(.*\)/\1${Suffix}\3/" \ |
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271 | Job_${config_UserChoices_JobName} > Job_${config_UserChoices_JobName}.tmp |
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272 | mv Job_${config_UserChoices_JobName}.tmp Job_${config_UserChoices_JobName} |
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273 | fi |
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274 | echo "OK. Now you can submit the Job : ${SUBMIT_DIR}/Job_${config_UserChoices_JobName}." |
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275 | ;; |
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276 | non|NON|n|no|NO) |
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277 | echo "Nothing to do !" |
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278 | ;; |
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279 | esac |
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280 | |
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281 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesCompleted |
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282 | if [ ! X${run_PostProcessing_TimeSeriesCompleted} = X ] ; then |
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283 | |
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284 | printf "${Green}TimeSeriesCompleted in run.card : ${run_PostProcessing_TimeSeriesCompleted}. Do we need to initialize it? (y/n) ${NoColor}" |
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285 | |
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286 | read reponse |
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287 | case ${reponse} in |
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288 | oui|OUI|o|y|yes|YES) |
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289 | #Update run.card |
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290 | cp ${SUBMIT_DIR}/run.card ${SUBMIT_DIR}/run.card.old |
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291 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesCompleted "" |
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292 | ;; |
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293 | *) |
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294 | echo "Nothing to do !" |
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295 | ;; |
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296 | esac |
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297 | fi |
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298 | |
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299 | else |
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300 | echo "You can submit the Job : ${SUBMIT_DIR}/Job_${config_UserChoices_JobName}." |
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301 | fi |
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302 | |
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303 | exit 0 |
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