source: tags/libIGCM_v1_3/AA_monitoring @ 1456

Last change on this file since 1456 was 134, checked in by sdipsl, 15 years ago
  • Do not use absolute path with monitoring01 as input_directory when producing files and images
  • More verbosity in monitoring.job
  • Bypass strange rcommand behaviour with a sleep for ulam
  • Property licence set to
    The following licence information concerns ONLY the libIGCM tools
    ==================================================================

    Copyright © Centre National de la Recherche Scientifique CNRS
    Commissariat à l'Énergie Atomique CEA

    libIGCM : Library for Portable Models Computation of IGCM Group.

    IGCM Group is the french IPSL Global Climate Model Group.

    This library is a set of shell scripts and functions whose purpose is
    the management of the initialization, the launch, the transfer of
    output files, the post-processing and the monitoring of datas produce
    by any numerical program on any plateforme.

    This software is governed by the CeCILL license under French law and
    abiding by the rules of distribution of free software. You can use,
    modify and/ or redistribute the software under the terms of the CeCILL
    license as circulated by CEA, CNRS and INRIA at the following URL
    "http://www.cecill.info".

    As a counterpart to the access to the source code and rights to copy,
    modify and redistribute granted by the license, users are provided only
    with a limited warranty and the software's author, the holder of the
    economic rights, and the successive licensors have only limited
    liability.

    In this respect, the user's attention is drawn to the risks associated
    with loading, using, modifying and/or developing or reproducing the
    software by the user in light of its specific status of free software,
    that may mean that it is complicated to manipulate, and that also
    therefore means that it is reserved for developers and experienced
    professionals having in-depth computer knowledge. Users are therefore
    encouraged to load and test the software's suitability as regards their
    requirements in conditions enabling the security of their systems and/or
    data to be ensured and, more generally, to use and operate it in the
    same conditions as regards security.

    The fact that you are presently reading this means that you have had
    knowledge of the CeCILL license and that you accept its terms.
  • Property svn:keywords set to Date Author Revision
File size: 6.3 KB
Line 
1#-Q- platine #!/usr/bin/ksh
2#-Q- platine ##################
3#-Q- platine ## PLATINE   CEA ##
4#-Q- platine ##################
5#-Q- platine #BSUB -J MONITORING             # Nom du job
6#-Q- platine #BSUB -N                        # message a la fin du job
7#-Q- platine #BSUB -n 1                      # reservation des processeurs pour le job
8#-Q- platine #BSUB -W 1:00                   # Limite temps
9#-Q- platine #BSUB -q post              # Passage en queue post
10#-Q- sx8brodie #!/bin/ksh
11#-Q- sx8brodie #######################
12#-Q- sx8brodie ## SX8BRODIE   IDRIS ##
13#-Q- sx8brodie #######################
14#-Q- sx8brodie # Temps Elapsed max. d'une requete hh:mm:ss
15#-Q- sx8brodie # @ wall_clock_limit = 10:00:00
16#-Q- sx8brodie # Nom du travail LoadLeveler
17#-Q- sx8brodie # @ job_name   = MONITORING
18#-Q- sx8brodie # Fichier de sortie standard du travail       
19#-Q- sx8brodie # @ output     = $(job_name).$(jobid)
20#-Q- sx8brodie # Fichier de sortie d'erreur du travail
21#-Q- sx8brodie # @ error      =  $(job_name).$(jobid)
22#-Q- sx8brodie # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
23#-Q- sx8brodie # @ notification = error
24#-Q- sx8brodie # @ environment  = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ;  $libIGCM_SX ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER
25#-Q- sx8brodie # @ queue
26#-Q- aix6 #!/bin/ksh
27#-Q- aix6 #######################
28#-Q- aix6 ##   VARGAS   IDRIS  ##
29#-Q- aix6 #######################
30#-Q- aix6 # Temps Elapsed max. d'une requete hh:mm:ss
31#-Q- aix6 # @ wall_clock_limit = 10:00:00
32#-Q- aix6 # Nom du travail LoadLeveler
33#-Q- aix6 # @ job_name   = MONITORING
34#-Q- aix6 # Fichier de sortie standard du travail       
35#-Q- aix6 # @ output     = $(job_name).$(jobid)
36#-Q- aix6 # Fichier de sortie d'erreur du travail
37#-Q- aix6 # @ error      =  $(job_name).$(jobid)
38#-Q- aix6 # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
39#-Q- aix6 # @ notification = error
40#-Q- aix6 # @ environment  = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $libIGCM_SX ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER
41#-Q- aix6 # @ queue
42#-Q- sx8mercure #!/bin/ksh
43#-Q- sx8mercure ######################
44#-Q- sx8mercure ## SX8MERCURE   CEA ##
45#-Q- sx8mercure ######################
46#-Q- sx8mercure #PBS -N  MONITORING          # Nom du job
47#-Q- sx8mercure #PBS -j o                    # regroupement des stdout et stderr
48#-Q- sx8mercure #PBS -S /usr/bin/ksh         # shell de soumission
49#-Q- sx8mercure #PBS -l memsz_job=1gb        # Limite memoire a 1 Go
50#-Q- sx8mercure #PBS -l cputim_job=1:00:00   # Limite temps a 2 heures
51#-Q- sx8mercure #PBS -q scalaire
52#-Q- default #!/bin/ksh
53#-Q- default ##################
54#-Q- default ## DEFAULT HOST ##
55#-Q- default ##################
56
57# $Date$
58# $Author$
59# $Revision$
60# IPSL (2006)
61#  This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC
62
63#set -eu
64#set -vx
65
66date
67
68#-Q- sx8brodie export OMP_NUM_THREADS=1
69#-Q- aix6 export OMP_NUM_THREADS=1
70
71######################################################################
72
73. ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh
74      ( ${DEBUG_debug} ) && IGCM_debug_Check
75. ${libIGCM}/libIGCM_card/libIGCM_card.ksh
76     ( ${DEBUG_debug} ) && IGCM_card_Check
77. ${libIGCM}/libIGCM_date/libIGCM_date.ksh
78     ( ${DEBUG_debug} ) && IGCM_date_Check
79#-------
80. ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh
81
82######################################################################
83
84#set -vx
85
86#===========================================
87RUN_DIR=${RUN_DIR_PATH}
88IGCM_sys_MkdirWork ${RUN_DIR}
89IGCM_sys_Cd ${RUN_DIR}
90
91if [ ${StandAlone} = true ] ; then
92    CARD_DIR=${SUBMIT_DIR}
93else
94    CARD_DIR=${RUN_DIR}/$( basename ${SUBMIT_DIR} )
95    IGCM_sys_Get_Master ${SUBMIT_DIR} ${RUN_DIR}
96fi
97
98#
99# First of all
100#
101IGCM_card_DefineArrayFromSection       ${CARD_DIR}/config.card UserChoices
102typeset option
103for option in ${config_UserChoices[*]} ; do
104    IGCM_card_DefineVariableFromOption ${CARD_DIR}/config.card UserChoices ${option}
105done
106IGCM_card_DefineArrayFromSection       ${CARD_DIR}/config.card ListOfComponents
107
108#
109R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_UserChoices_JobName}
110
111#
112IGCM_sys_TestDirArchive ${R_SAVE}/MONITORING
113if [ $? = 0 ] ; then
114    IGCM_debug_Print 1 "Get MONITORING directory from archive"
115    IGCM_sys_Get_Dir ${R_SAVE}/MONITORING ${RUN_DIR}
116else
117    IGCM_debug_Print 1 "MONITORING first pass. Nothing has been done before"
118fi
119# --------------------------------------------
120# Insert your commands between III...III lines
121# and precise produced directories to save
122# IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
123
124for comp in ${config_ListOfComponents[*]} ; do
125    liste_file_monitoring=""
126    IGCM_card_DefineArrayFromOption ${CARD_DIR}/config.card ListOfComponents ${comp}
127    eval compname=\${config_ListOfComponents_${comp}[0]}                > /dev/null 2>&1
128    eval monitoring_file=monitoring01_${compname}_\${RESOL_${comp}}.cfg > /dev/null 2>&1
129    #
130    if [ -f ${FER_ATLAS}/${monitoring_file} ] ; then
131        IGCM_debug_Print 1 "Determine which files we need."
132        . monitoring01 -l2 --listcommand 'IGCM_sys_RshArchive ls' ${FER_ATLAS}/${monitoring_file} ${R_SAVE}/${comp}/Analyse/TS_MO
133        liste_file_monitoring=$( . monitoring01 -q -l2 --listcommand 'IGCM_sys_RshArchive ls' ${FER_ATLAS}/${monitoring_file} ${R_SAVE}/${comp}/Analyse/TS_MO )
134    else
135        IGCM_debug_Print 1 "WARNING. This file does not exist : ${FER_ATLAS}/${monitoring_file}"
136    fi
137    #
138    if [ ! "X${liste_file_monitoring}" = X ] ; then
139        IGCM_sys_Get /l liste_file_monitoring ${RUN_DIR}
140        monitoring01 -c ${CARD_DIR} -p ${comp} --time -t "${config_UserChoices_JobName} monitoring" -o ${RUN_DIR}/MONITORING ${FER_ATLAS}/${monitoring_file} .
141    else
142        IGCM_debug_Print 1 "No time series detected by this command :"
143        IGCM_debug_Print 1 "monitoring01 -l2 --listcommand 'IGCM_sys_RshArchive ls' ${FER_ATLAS}/${monitoring_file} ${R_SAVE}/${comp}/Analyse/TS_MO"
144        . monitoring01 -l2 --listcommand 'IGCM_sys_RshArchive ls' ${FER_ATLAS}/${monitoring_file} ${R_SAVE}/${comp}/Analyse/TS_MO
145    fi
146    #
147done
148
149# IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
150
151# Save files
152IGCM_sys_Put_Dir MONITORING ${R_SAVE}
153
154# Dods copy
155IGCM_sys_Put_Dods MONITORING
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