source: tags/libIGCM_v1_7/AA_atlas_PISCES @ 1579

Last change on this file since 1579 was 299, checked in by mafoipsl, 14 years ago

Use mercure (scalaire) new front end for SX8 post-processing.
File size: 7.8 KB
Line 
1#-Q- platine #!/usr/bin/ksh
2#-Q- platine ##################
3#-Q- platine ## PLATINE   CEA ##
4#-Q- platine ##################
5#-Q- platine #BSUB -J ATL_PIS           # Nom du job
6#-Q- platine #BSUB -N                   # message a la fin du job
7#-Q- platine #BSUB -n 1                 # reservation des processeurs pour le job
8#-Q- platine #BSUB -W 1:00              # Limite temps
9#-Q- platine #BSUB -q post              # Passage en queue post
10#-Q- sx8brodie #!/bin/ksh
11#-Q- sx8brodie #######################
12#-Q- sx8brodie ## SX8BRODIE   IDRIS ##
13#-Q- sx8brodie #######################
14#-Q- sx8brodie # Temps Elapsed max. d'une requete hh:mm:ss
15#-Q- sx8brodie # @ wall_clock_limit = 10:00:00
16#-Q- sx8brodie # Nom du travail LoadLeveler
17#-Q- sx8brodie # @ job_name   = ATL_PIS
18#-Q- sx8brodie # Fichier de sortie standard du travail       
19#-Q- sx8brodie # @ output     = $(job_name).$(jobid)
20#-Q- sx8brodie # Fichier de sortie d'erreur du travail
21#-Q- sx8brodie # @ error      =  $(job_name).$(jobid)
22#-Q- sx8brodie # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
23#-Q- sx8brodie # @ notification = error
24#-Q- sx8brodie # @ environment  = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER ; $libIGCM_SX
25#-Q- sx8brodie # @ queue
26#-Q- aix6 #!/bin/ksh
27#-Q- aix6 #######################
28#-Q- aix6 ##   VARGAS   IDRIS  ##
29#-Q- aix6 #######################
30#-Q- aix6 # Temps Elapsed max. d'une requete hh:mm:ss
31#-Q- aix6 # @ wall_clock_limit = 10:00:00
32#-Q- aix6 # Nom du travail LoadLeveler
33#-Q- aix6 # @ job_name   = ATL_PIS
34#-Q- aix6 # Fichier de sortie standard du travail       
35#-Q- aix6 # @ output     = $(job_name).$(jobid)
36#-Q- aix6 # Fichier de sortie d'erreur du travail
37#-Q- aix6 # @ error      =  $(job_name).$(jobid)
38#-Q- aix6 # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
39#-Q- aix6 # @ notification = error
40#-Q- aix6 # @ environment  = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER ; $libIGCM_SX
41#-Q- aix6 # @ queue
42#-Q- sx8mercure #!/bin/ksh
43#-Q- sx8mercure ######################
44#-Q- sx8mercure ## SX8MERCURE   CEA ##
45#-Q- sx8mercure ######################
46#-Q- sx8mercure #PBS -N  ATL_PIS             # Nom du job
47#-Q- sx8mercure #PBS -j o                    # regroupement des stdout et stderr
48#-Q- sx8mercure #PBS -S /usr/bin/ksh         # shell de soumission
49#-Q- sx8mercure #PBS -l memsz_job=1gb        # Limite memoire a 1 Go
50#-Q- sx8mercure #PBS -l cputim_job=2:00:00   # Limite temps a 2 heures
51#-Q- sx8mercure #PBS -q scalaire
52#-Q- sx9mercure #!/bin/ksh
53#-Q- sx9mercure ######################
54#-Q- sx9mercure ## SX9MERCURE   CEA ##
55#-Q- sx9mercure ######################
56#-Q- sx9mercure #PBS -N  ATL_PIS             # Nom du job
57#-Q- sx9mercure #PBS -j o                    # regroupement des stdout et stderr
58#-Q- sx9mercure #PBS -S /usr/bin/ksh         # shell de soumission
59#-Q- sx9mercure #PBS -l memsz_job=1gb        # Limite memoire a 1 Go
60#-Q- sx9mercure #PBS -l cputim_job=2:00:00   # Limite temps a 2 heures
61#-Q- sx9mercure #PBS -q scalaire
62#-Q- default #!/bin/ksh
63#-Q- default ##################
64#-Q- default ## DEFAULT HOST ##
65#-Q- default ##################
66
67# $Date: 2010-01-22 12:24:21 +0100 (Fri, 22 Jan 2010) $
68# $Author: aclsce $
69# $Revision: 215 $
70# IPSL (2006)
71#  This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC
72
73#set -eu
74#set -vx
75
76date
77
78#-Q- sx8brodie export OMP_NUM_THREADS=1
79#-Q- aix6 export OMP_NUM_THREADS=1
80
81########################################################################
82
83. ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh
84      ( ${DEBUG_debug} ) && IGCM_debug_Check
85. ${libIGCM}/libIGCM_card/libIGCM_card.ksh
86     ( ${DEBUG_debug} ) && IGCM_card_Check
87. ${libIGCM}/libIGCM_date/libIGCM_date.ksh
88     ( ${DEBUG_debug} ) && IGCM_date_Check
89#-------
90. ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh
91
92########################################################################
93
94#set -vx
95
96IGCM_sys_MkdirWork ${RUN_DIR_PATH}
97IGCM_sys_Cd ${RUN_DIR_PATH}
98
99if [ ${StandAlone} = true ] ; then
100    CARD_DIR=${SUBMIT_DIR}
101else
102    CARD_DIR=${RUN_DIR_PATH}/$( basename ${SUBMIT_DIR} )
103    IGCM_sys_Get_Master ${SUBMIT_DIR} ${RUN_DIR_PATH}
104fi
105#
106# First of all
107#
108IGCM_card_DefineArrayFromSection       ${CARD_DIR}/config.card UserChoices
109typeset option
110for option in ${config_UserChoices[*]} ; do
111    IGCM_card_DefineVariableFromOption ${CARD_DIR}/config.card UserChoices ${option}
112done
113
114#
115echo
116IGCM_debug_Print 1 "DefineArrayFromOption  : config_UserChoices"
117IGCM_debug_PrintVariables 3 config_UserChoices_JobName
118IGCM_debug_PrintVariables 3 config_UserChoices_LongName
119IGCM_debug_PrintVariables 3 config_UserChoices_TagName
120IGCM_debug_PrintVariables 3 config_UserChoices_SpaceName
121IGCM_debug_PrintVariables 3 config_UserChoices_ExperimentName
122IGCM_debug_PrintVariables 3 config_UserChoices_CalendarType
123IGCM_debug_PrintVariables 3 config_UserChoices_DateBegin
124IGCM_debug_PrintVariables 3 config_UserChoices_DateEnd
125IGCM_debug_PrintVariables 3 config_UserChoices_PeriodLength
126echo
127
128#==================================
129#R_SAVE : Job output directory
130if ( [ ! X${config_UserChoices_SpaceName} = X ] && [ ! X${config_UserChoices_ExperimentName} = X ] ) ; then
131    FreeName=$( echo ${config_UserChoices_JobName} | sed 's/.*_//' )
132    R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${FreeName}
133    R_DODS=${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${FreeName}
134else
135    R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_UserChoices_JobName}
136    R_DODS=${config_UserChoices_TagName}/${config_UserChoices_JobName}
137fi
138#
139
140R_ATLAS=ATLAS/SE_${YEARS}
141R_OUT_MBG=${R_SAVE}/MBG
142
143RUN_DIR=${RUN_DIR_PATH}/ATLAS_PISCES_${YEARS}
144IGCM_sys_MkdirWork ${RUN_DIR}
145IGCM_sys_Cd ${RUN_DIR}
146
147# --------------------------------------------
148# Insert your commands between III...III lines
149# and precise produced directories to save
150# IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
151
152IGCM_sys_Get ${R_OUT_MBG}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_ptrc_T.nc  ${RUN_DIR}
153IGCM_sys_Get ${R_OUT_MBG}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_diad_T.nc  ${RUN_DIR}
154
155atlas -o ${RUN_DIR}/${R_ATLAS}/MBG_T -l ${FER_ATLAS}/atlas_p_PISCES_diag1_*.cfg  \
156                                        ${FER_ATLAS}/atlas_p_PISCES_diag0_a.cfg  ${RUN_DIR}/${config_UserChoices_JobName}_SE_${YEARS}_1M_ptrc_T.nc
157atlas -o ${RUN_DIR}/${R_ATLAS}/MBG_F -l ${FER_ATLAS}/atlas_p_PISCES_diag2_a.cfg  \
158                                        ${FER_ATLAS}/atlas_p_PISCES_diag0_b.cfg  ${RUN_DIR}/${config_UserChoices_JobName}_SE_${YEARS}_1M_diad_T.nc
159
160# IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
161
162# Put ferret journal files together
163for file in $( ls ${R_ATLAS}/MBG_T/*/*jnl ) ; do
164    echo -e "\n\n################################" ;
165    echo -e "$file\n" ; cat $file ;
166done  > ${R_ATLAS}/MBG_T/allferretscript.txt
167
168for file in $( ls ${R_ATLAS}/MBG_F/*/*jnl ) ; do
169    echo -e "\n\n################################" ;
170    echo -e "$file\n" ; cat $file ;
171done  > ${R_ATLAS}/MBG_F/allferretscript.txt
172# Clear some files
173find . \( -name "*.stdout" -o -name "*.jnl" \) -print -exec rm -f {} \;
174
175# Save files
176IGCM_sys_Put_Dir ATLAS ${R_SAVE}
177
178IGCM_sys_Rm -Rf ATLAS
179IGCM_sys_Rm ${config_UserChoices_JobName}_SE_${YEARS}_1M_ptrc_T.nc
180IGCM_sys_Rm ${config_UserChoices_JobName}_SE_${YEARS}_1M_diad_T.nc
181
182# DODS copy
183IGCM_sys_TestDirArchive ${R_SAVE}/${R_ATLAS}
184[ $? = 0 ] && IGCM_sys_Put_Dods ${R_ATLAS}
185
186# Clean RUN_DIR_PATH (necessary for cesium)
187IGCM_sys_RmRunDir -Rf ${RUN_DIR_PATH}
Note: See TracBrowser for help on using the repository browser.