| 1 | #-Q- cesium #!/bin/ksh |
|---|
| 2 | #-Q- cesium ################################################### |
|---|
| 3 | #-Q- cesium ## CESIUM CEA ## |
|---|
| 4 | #-Q- cesium ## Usefull for postprocessing. AA_job not tested ## |
|---|
| 5 | #-Q- cesium ################################################### |
|---|
| 6 | #-Q- cesium #MSUB -r ::Jobname:: # Nom du job |
|---|
| 7 | #-Q- cesium #MSUB -N 1 # Reservation du noeud |
|---|
| 8 | #-Q- cesium #MSUB -n 1 # Reservation du processus |
|---|
| 9 | #-Q- cesium #MSUB -T 86400 # Limite de temps elapsed du job |
|---|
| 10 | #-Q- cesium #MSUB -E "-j o" |
|---|
| 11 | #-Q- cesium #MSUB -E "-S /bin/ksh" |
|---|
| 12 | #-Q- platine #!/usr/bin/ksh |
|---|
| 13 | #-Q- platine ################## |
|---|
| 14 | #-Q- platine ## PLATINE CEA ## |
|---|
| 15 | #-Q- platine ################## |
|---|
| 16 | #-Q- platine #BSUB -J ::Jobname:: # nom de la requete |
|---|
| 17 | #-Q- platine #BSUB -N # message a la fin du job |
|---|
| 18 | #-Q- platine #BSUB -o Script_Output_::Jobname::.000001 # nom du fichier de sortie |
|---|
| 19 | #-Q- platine #BSUB -n ::JobNumProcTot:: # reservation des processeurs pour le job |
|---|
| 20 | #-Q- platine #BSUB -W 1:00 # Limite temps |
|---|
| 21 | #-Q- platine BATCH_NUM_PROC_TOT=$SLURM_NPROCS |
|---|
| 22 | #-Q- titane #!/usr/bin/ksh |
|---|
| 23 | #-Q- titane ################## |
|---|
| 24 | #-Q- titane ## TITANE CEA ## |
|---|
| 25 | #-Q- titane ################## |
|---|
| 26 | #-Q- titane #MSUB -r ::Jobname:: # nom de la requete |
|---|
| 27 | #-Q- titane #MSUB -o Script_Output_::Jobname::.000001 # nom du fichier de sortie |
|---|
| 28 | #-Q- titane #MSUB -n ::JobNumProcTot:: # reservation des processeurs pour le job |
|---|
| 29 | #-Q- titane #MSUB -T 86400 # Limite temps (en secondes) |
|---|
| 30 | #-Q- titane #MSUB -p gen2211 |
|---|
| 31 | #-Q- titane BATCH_NUM_PROC_TOT=$BRIDGE_MSUB_NPROC |
|---|
| 32 | #-Q- sx8brodie ####################### |
|---|
| 33 | #-Q- sx8brodie ## SX8BRODIE IDRIS ## |
|---|
| 34 | #-Q- sx8brodie ####################### |
|---|
| 35 | #-Q- sx8brodie #PBS -N ::Jobname:: # nom de la requete |
|---|
| 36 | #-Q- sx8brodie #PBS -m a # message a la fin du job |
|---|
| 37 | #-Q- sx8brodie #PBS -j o # regroupement des sorties du job : standard error et output |
|---|
| 38 | #-Q- sx8brodie #PBS -o Script_Output_::Jobname::.000001 # nom du fichier de sortie |
|---|
| 39 | #-Q- sx8brodie #PBS -S /usr/bin/ksh # shell de soumission |
|---|
| 40 | #-Q- sx8brodie #PBS -v BATCH_NUM_PROC_TOT=::JobNumProcTot:: |
|---|
| 41 | #-Q- sx8brodie #PBS -q ::JobClass:: # classe multi pour BATCH_NUM_PROC_TOT superieur a 2, mono sinon |
|---|
| 42 | #-Q- sx8brodie #PBS -l cpunum_job=${BATCH_NUM_PROC_TOT} # reservation des processeurs pour le job |
|---|
| 43 | #-Q- sx8brodie #PBS -l memsz_job=15.0gb # Limite memoire |
|---|
| 44 | #-Q- sx8brodie #PBS -l cputim_job=1:00:00 # Limite temps |
|---|
| 45 | #-Q- aix6 #!/usr/bin/ksh |
|---|
| 46 | #-Q- aix6 # ###################### |
|---|
| 47 | #-Q- aix6 # ## VARGAS IDRIS ## |
|---|
| 48 | #-Q- aix6 # ###################### |
|---|
| 49 | #-Q- aix6 # Nom de la requete |
|---|
| 50 | #-Q- aix6 # @ job_name = ::Jobname:: |
|---|
| 51 | #-Q- aix6 # Type de travail |
|---|
| 52 | #-Q- aix6 # @ job_type = parallel |
|---|
| 53 | #-Q- aix6 # Fichier de sortie standard |
|---|
| 54 | #-Q- aix6 # @ output = $(job_name).$(jobid) |
|---|
| 55 | #-Q- aix6 # Fichier de sortie erreur (le meme) |
|---|
| 56 | #-Q- aix6 # @ error = $(job_name).$(jobid) |
|---|
| 57 | #-Q- aix6 # Nombre de processus demandes |
|---|
| 58 | #-Q- aix6 # @ total_tasks = ::JobNumProcTot:: |
|---|
| 59 | #-Q- aix6 # @ environment = "BATCH_NUM_PROC_TOT=::JobNumProcTot::" |
|---|
| 60 | #-Q- aix6 # Temps CPU max. par processus MPI hh:mm:ss |
|---|
| 61 | #-Q- aix6 # @ wall_clock_limit = 1:00:00 |
|---|
| 62 | #-Q- aix6 # Memoire max. utilisee par processus |
|---|
| 63 | #-Q- aix6 # @ data_limit = 3.2gb |
|---|
| 64 | #-Q- aix6 # Memoire stack demandee |
|---|
| 65 | #-Q- aix6 # @ stack_limit = 0.3gb,0.3gb |
|---|
| 66 | #-Q- aix6 # Pas d OpenMP |
|---|
| 67 | #-Q- aix6 # @ resources = ConsumableCpus(1) |
|---|
| 68 | #-Q- aix6 # Fin de l entete |
|---|
| 69 | #-Q- aix6 # @ queue |
|---|
| 70 | #-Q- sx8mercure #!/bin/ksh |
|---|
| 71 | #-Q- sx8mercure ###################### |
|---|
| 72 | #-Q- sx8mercure ## SX8MERCURE CEA ## |
|---|
| 73 | #-Q- sx8mercure ###################### |
|---|
| 74 | #-Q- sx8mercure #PBS -N ::Jobname:: # nom de la requete |
|---|
| 75 | #-Q- sx8mercure #PBS -m a # message a la fin du job |
|---|
| 76 | #-Q- sx8mercure #PBS -j o # regroupement des sorties du job : standard error et output |
|---|
| 77 | #-Q- sx8mercure ####PBS -A gen6178 |
|---|
| 78 | #-Q- sx8mercure #PBS -o Script_Output_::Jobname::.000001 # nom du fichier de sortie |
|---|
| 79 | #-Q- sx8mercure #PBS -S /usr/bin/ksh # shell de soumission |
|---|
| 80 | #-Q- sx8mercure #PBS -v BATCH_NUM_PROC_TOT=::JobNumProcTot:: |
|---|
| 81 | #-Q- sx8mercure #PBS -l cpunum_job=${BATCH_NUM_PROC_TOT} # reservation des processeurs pour le job |
|---|
| 82 | #-Q- sx8mercure #PBS -l memsz_job=15.0gb # limite memoire |
|---|
| 83 | #-Q- sx8mercure #PBS -l elapstim_req=01:00:00 # limite en temps elapsed |
|---|
| 84 | #-Q- sx9mercure #!/bin/ksh |
|---|
| 85 | #-Q- sx9mercure ###################### |
|---|
| 86 | #-Q- sx9mercure ## SX9MERCURE CEA ## |
|---|
| 87 | #-Q- sx9mercure ###################### |
|---|
| 88 | #-Q- sx9mercure #PBS -N ::Jobname:: # nom de la requete |
|---|
| 89 | #-Q- sx9mercure #PBS -m a # message a la fin du job |
|---|
| 90 | #-Q- sx9mercure #PBS -j o # regroupement des sorties du job : standard error et output |
|---|
| 91 | #-Q- sx9mercure #PBS -o Script_Output_::Jobname::.000001 # nom du fichier de sortie |
|---|
| 92 | #-Q- sx9mercure #PBS -S /usr/bin/ksh # shell de soumission |
|---|
| 93 | #-Q- sx9mercure #PBS -v BATCH_NUM_PROC_TOT=::JobNumProcTot:: |
|---|
| 94 | #-Q- sx9mercure #PBS -l cpunum_job=${BATCH_NUM_PROC_TOT} # reservation des processeurs pour le job |
|---|
| 95 | #-Q- sx9mercure #PBS -l memsz_job=16.0gb # limite memoire |
|---|
| 96 | #-Q- sx9mercure #PBS -l elapstim_req=24:00:00 # limite en temps elapsed |
|---|
| 97 | #-Q- sx9mercure #PBS -A gen6178 # groupe obligatoire sur SX9 |
|---|
| 98 | #-Q- sx9mercure #PBS -q para-sx9 # para-sx9 or prio-sx9 (for CMIP5 top priorities) or test-sx9 (if elapsed<1h) |
|---|
| 99 | #-Q- lxiv8 ###################### |
|---|
| 100 | #-Q- lxiv8 ## OBELIX LSCE ## |
|---|
| 101 | #-Q- lxiv8 ###################### |
|---|
| 102 | #-Q- lxiv8 #PBS -N ::Jobname:: |
|---|
| 103 | #-Q- lxiv8 #PBS -m a |
|---|
| 104 | #-Q- lxiv8 #PBS -j oe |
|---|
| 105 | #-Q- lxiv8 #PBS -q medium |
|---|
| 106 | #-Q- lxiv8 #PBS -o Script_Output_::Jobname::.000001 |
|---|
| 107 | #-Q- lxiv8 #PBS -S /bin/ksh |
|---|
| 108 | #-Q- lxiv8 #PBS -v BATCH_NUM_PROC_TOT=::JobNumProcTot:: |
|---|
| 109 | #-Q- lxiv8 #PBS -l nodes=1:ppn=::JobNumProcTot:: |
|---|
| 110 | #-Q- default #!/bin/ksh |
|---|
| 111 | #-Q- default ################## |
|---|
| 112 | #-Q- default ## DEFAULT HOST ## |
|---|
| 113 | #-Q- default ################## |
|---|
| 114 | #-Q- default #For MPI use, uncomment next line : |
|---|
| 115 | #-Q- default #BATCH_NUM_PROC_TOT=::JobNumProcTot:: |
|---|
| 116 | |
|---|
| 117 | # $Date$ |
|---|
| 118 | # $Author$ |
|---|
| 119 | # $Revision$ |
|---|
| 120 | # IPSL (2006) |
|---|
| 121 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
|---|
| 122 | |
|---|
| 123 | #set -eu |
|---|
| 124 | #set -vx |
|---|
| 125 | |
|---|
| 126 | date |
|---|
| 127 | echo |
|---|
| 128 | echo "#######################################" |
|---|
| 129 | echo "# ANOTHER GREAT SIMULATION #" |
|---|
| 130 | echo "#######################################" |
|---|
| 131 | echo |
|---|
| 132 | |
|---|
| 133 | #D--------------------------------------------------------------------== |
|---|
| 134 | #D--------------------------------------------------------------------== |
|---|
| 135 | #D- |
|---|
| 136 | #D- Job to launch IGCM models |
|---|
| 137 | #D- |
|---|
| 138 | #D--------------------------------------------------------------------== |
|---|
| 139 | #D--------------------------------------------------------------------== |
|---|
| 140 | #D- |
|---|
| 141 | |
|---|
| 142 | MODIPSL=::modipsl:: |
|---|
| 143 | libIGCM=${MODIPSL}/libIGCM |
|---|
| 144 | |
|---|
| 145 | #D--------------------------------------------------------------------== |
|---|
| 146 | #D- -1. User modification place |
|---|
| 147 | #D- - Job Verbosity |
|---|
| 148 | #D- - PeriodNb |
|---|
| 149 | #D- - Experience type : DEB(ug), DEV(elopment), RUN |
|---|
| 150 | #D--------------------------------------------------------------------== |
|---|
| 151 | |
|---|
| 152 | #D- Increased verbosity (1, 2, 3) |
|---|
| 153 | Verbosity=3 |
|---|
| 154 | #D- Number of execution in one job |
|---|
| 155 | PeriodNb=1 |
|---|
| 156 | #-Q- sx9mercure PeriodNb=60 |
|---|
| 157 | |
|---|
| 158 | #D- |
|---|
| 159 | # -------------------------------------------------------------------- |
|---|
| 160 | #D- ! Optionnal features /!\ Use with care ! |
|---|
| 161 | # -------------------------------------------------------------------- |
|---|
| 162 | |
|---|
| 163 | #D- Low level debug : to bypass lib test checks and stack construction |
|---|
| 164 | #D- Default=true |
|---|
| 165 | DEBUG_debug=false |
|---|
| 166 | |
|---|
| 167 | #D- Set DEBUG_sys to false to disable output calls of function |
|---|
| 168 | #D- Default=true |
|---|
| 169 | #DEBUG_sys=false |
|---|
| 170 | |
|---|
| 171 | #D- Experience type : DEB(ug), DEV(elopment), RUN (default) |
|---|
| 172 | JobType=RUN |
|---|
| 173 | |
|---|
| 174 | #D- Define running directory |
|---|
| 175 | #D- Default=${TMPDIR} ie temporary batch directory |
|---|
| 176 | #RUN_DIR_PATH=/workdir/or/scratchdir/of/this/machine |
|---|
| 177 | |
|---|
| 178 | #D- Define submit directory |
|---|
| 179 | #D- Default= where you launch qsub (variable from scheduler) |
|---|
| 180 | #SUBMIT_DIR=$( pwd ) |
|---|
| 181 | |
|---|
| 182 | #D- Define BIG_DIR directory |
|---|
| 183 | #D- Default=(strongly machine dependant/see libIGCM_sys for details) |
|---|
| 184 | #BIG_DIR=/somewhere/with/lot/of/space/scratchdir/may/be |
|---|
| 185 | |
|---|
| 186 | #D- Turn in dry run mode ? (0,1,2,3) |
|---|
| 187 | #D- Default=0 |
|---|
| 188 | #DRYRUN=3 |
|---|
| 189 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
|---|
| 190 | # ------------------------------------------------------------------------------------- |
|---|
| 191 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
|---|
| 192 | # | | Cp/Exe param files | | Chmod | | |
|---|
| 193 | # | | Qsub | | | | |
|---|
| 194 | # ------------------------------------------------------------------------------------- |
|---|
| 195 | # | 0 | yes | yes | yes | yes | |
|---|
| 196 | # ------------------------------------------------------------------------------------- |
|---|
| 197 | # | 1 | yes | yes | yes | no | |
|---|
| 198 | # ------------------------------------------------------------------------------------- |
|---|
| 199 | # | 2 | yes | yes | no | no | |
|---|
| 200 | # ------------------------------------------------------------------------------------- |
|---|
| 201 | # | 3 | yes | no | no | no | |
|---|
| 202 | # ------------------------------------------------------------------------------------- |
|---|
| 203 | |
|---|
| 204 | #D- Define input file root directory |
|---|
| 205 | #D- Default=/IGCMG/common/account/of/this/machine |
|---|
| 206 | #R_IN=/u/rech/por/rpor111/DATA |
|---|
| 207 | |
|---|
| 208 | #D- |
|---|
| 209 | #D--------------------------------------------------------------------== |
|---|
| 210 | #D- 0. System Environment |
|---|
| 211 | #D- - Define variables for Number of processors |
|---|
| 212 | #D- - Define MPI variables |
|---|
| 213 | #D- - Define batch scheduler variables |
|---|
| 214 | #D- - Source IGCM Library |
|---|
| 215 | #D- - Get RESOLution in .resol file (temporary) |
|---|
| 216 | #D--------------------------------------------------------------------== |
|---|
| 217 | |
|---|
| 218 | #D--------------------------------------------------------------------== |
|---|
| 219 | |
|---|
| 220 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
|---|
| 221 | ( ${DEBUG_debug} ) && IGCM_debug_Check |
|---|
| 222 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
|---|
| 223 | ( ${DEBUG_debug} ) && IGCM_card_Check |
|---|
| 224 | . ${libIGCM}/libIGCM_date/libIGCM_date.ksh |
|---|
| 225 | ( ${DEBUG_debug} ) && IGCM_date_Check |
|---|
| 226 | #------- |
|---|
| 227 | . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh |
|---|
| 228 | . ${libIGCM}/libIGCM_config/libIGCM_config.ksh |
|---|
| 229 | . ${libIGCM}/libIGCM_comp/libIGCM_comp.ksh |
|---|
| 230 | . ${libIGCM}/libIGCM_post/libIGCM_post.ksh |
|---|
| 231 | |
|---|
| 232 | #D--------------------------------------------------------------------== |
|---|
| 233 | |
|---|
| 234 | #-- Resolution FLAG for oasis input |
|---|
| 235 | [ -f ${SUBMIT_DIR}/../.resol ] && RESOL=$(head -1 ${SUBMIT_DIR}/../.resol) |
|---|
| 236 | #RESOL="ORCA2xLMD9671" |
|---|
| 237 | |
|---|
| 238 | #D- |
|---|
| 239 | #D--------------------------------------------------------------------== |
|---|
| 240 | #D- 1. INITIALIZE CONFIGURATION AND THEN COMPONENTS |
|---|
| 241 | #D--------------------------------------------------------------------== |
|---|
| 242 | |
|---|
| 243 | # --------------------------------------------------------------------== |
|---|
| 244 | #D- Initialize configuration : |
|---|
| 245 | #D- - Simulation configuration |
|---|
| 246 | #D- - Simulation parameters |
|---|
| 247 | #D- - Execution parameter |
|---|
| 248 | #D- - Define input files directory |
|---|
| 249 | #D- - Read or initialize CumulPeriod |
|---|
| 250 | #D- - run.card |
|---|
| 251 | #D- |
|---|
| 252 | # --------------------------------------------------------------------== |
|---|
| 253 | IGCM_config_Initialize |
|---|
| 254 | |
|---|
| 255 | # --------------------------------------------------------------------== |
|---|
| 256 | #D- Define, create and cd RUN_DIR |
|---|
| 257 | #D- |
|---|
| 258 | # --------------------------------------------------------------------== |
|---|
| 259 | RUN_DIR=${RUN_DIR_PATH}/${config_UserChoices_TagName}/${config_UserChoices_JobName}.${$} |
|---|
| 260 | IGCM_sys_MkdirWork ${RUN_DIR} |
|---|
| 261 | IGCM_sys_Cd ${RUN_DIR} |
|---|
| 262 | |
|---|
| 263 | # --------------------------------------------------------------------== |
|---|
| 264 | #D- Initialize each components taking part |
|---|
| 265 | #D- into simulation configuration : |
|---|
| 266 | #D- - Define component executable |
|---|
| 267 | #D- - Define Write Frequency by component "1M" "1D" ... |
|---|
| 268 | #D- - Source ${comp}.driver |
|---|
| 269 | #D- - Define Storage Places by component |
|---|
| 270 | #D- - ${comp}_Initialize : |
|---|
| 271 | #D- - Patterns to sed |
|---|
| 272 | #D- - Variables from namelist |
|---|
| 273 | #D- |
|---|
| 274 | # --------------------------------------------------------------------== |
|---|
| 275 | IGCM_comp_Initialize |
|---|
| 276 | |
|---|
| 277 | # --------------------------------------------------------------------== |
|---|
| 278 | #D- Verify compatibility of period length, write frequencies, ... |
|---|
| 279 | #D- Verify compatibility of rebuild choices and post-process choices |
|---|
| 280 | #D- Will stop here if something is wrong |
|---|
| 281 | # --------------------------------------------------------------------== |
|---|
| 282 | #IGCM_config_Check |
|---|
| 283 | |
|---|
| 284 | #D--------------------------------------------------------------------== |
|---|
| 285 | #D- 2. ENTER THE DEEP EXECUTION LOOP |
|---|
| 286 | #D- !!!! FASTEN YOUR SEAT BELTS !!!! |
|---|
| 287 | #D- !!!!! PLEASE. !!!! |
|---|
| 288 | #D- !! WE WILL CROSS TURBULENCES. !! |
|---|
| 289 | #D--------------------------------------------------------------------== |
|---|
| 290 | |
|---|
| 291 | Period=1 |
|---|
| 292 | |
|---|
| 293 | PeriodContinue=false |
|---|
| 294 | if [ ${Period} -le ${PeriodNb} ]; then |
|---|
| 295 | PeriodContinue=true |
|---|
| 296 | fi |
|---|
| 297 | while ( ${PeriodContinue} ) ; do |
|---|
| 298 | |
|---|
| 299 | echo |
|---|
| 300 | echo "Starting iteration ${Period} / ${PeriodNb}" |
|---|
| 301 | |
|---|
| 302 | #D- |
|---|
| 303 | # ------------------------------------------------------------------ |
|---|
| 304 | #D- COMPUTE AND DEFINE DATE STUFF. |
|---|
| 305 | # ------------------------------------------------------------------ |
|---|
| 306 | IGCM_config_PeriodStart |
|---|
| 307 | #D- => ${PeriodDateBegin} |
|---|
| 308 | #D- => ${PeriodDateEnd} |
|---|
| 309 | #D- => ${CumulPeriod} |
|---|
| 310 | #D- => ${DatesPeriod}=${PeriodDateBegin}_${PeriodDateEnd} |
|---|
| 311 | #D- => ${PeriodLength} => JOURS=31 , 28, 29, 30 ; MOIS=0 ; ANS=0 |
|---|
| 312 | #D- => update run.card value |
|---|
| 313 | |
|---|
| 314 | #D- |
|---|
| 315 | # ------------------------------------------------------------------ |
|---|
| 316 | #D- Optionnal function in driver |
|---|
| 317 | #D- to set special variables used in forward lists (Param, Init or Bc). |
|---|
| 318 | # ------------------------------------------------------------------ |
|---|
| 319 | IGCM_comp_PeriodStart |
|---|
| 320 | |
|---|
| 321 | #D- |
|---|
| 322 | # ------------------------------------------------------------------ |
|---|
| 323 | #D- Get parameters text files updated by job (.def, namelist ...) |
|---|
| 324 | #D- READ AND USE BY GCM AT EACH EXECUTION. |
|---|
| 325 | # ------------------------------------------------------------------ |
|---|
| 326 | IGCM_comp_GetInputParametersFiles |
|---|
| 327 | |
|---|
| 328 | #D- |
|---|
| 329 | # ------------------------------------------------------------------ |
|---|
| 330 | #D- Get initial state (Etat0, carteveg,relief...) |
|---|
| 331 | #D- NECESSARY ONLY IF CumulPeriod= (=> NUMERO) == 1 |
|---|
| 332 | #D- AND ???_Restart=NO |
|---|
| 333 | #D- READ AND USE BY GCM FOR ONLY ONE EXECUTION. |
|---|
| 334 | # ------------------------------------------------------------------ |
|---|
| 335 | IGCM_comp_GetInputInitialStateFiles |
|---|
| 336 | |
|---|
| 337 | #D- |
|---|
| 338 | # ------------------------------------------------------------------ |
|---|
| 339 | #D- Get Boundaries Conditions (SST, WIND[X,Y,Z], LAI ...) |
|---|
| 340 | #D- READ AND USE BY GCM AT EACH EXECUTION. |
|---|
| 341 | # ------------------------------------------------------------------ |
|---|
| 342 | IGCM_comp_GetInputBoundaryFiles |
|---|
| 343 | |
|---|
| 344 | #D- |
|---|
| 345 | # ------------------------------------------------------------------ |
|---|
| 346 | #D- Get SmoothFiles Conditions (SST, WIND[X,Y,Z], LAI ...) |
|---|
| 347 | #D- READ AND USE BY GCM AT EACH EXECUTION but varying in time |
|---|
| 348 | # ------------------------------------------------------------------ |
|---|
| 349 | IGCM_comp_GetInputSmoothFiles |
|---|
| 350 | |
|---|
| 351 | #D- |
|---|
| 352 | # ------------------------------------------------------------------ |
|---|
| 353 | #D- Get restart files (restartphy.nc, orca_restart.nc ...) |
|---|
| 354 | #D- READ AND USE BY GCM AT EACH EXECUTION. |
|---|
| 355 | #D- |
|---|
| 356 | #D- IF A COMPONENT DO NOT RESTART FROM PREVIOULSY COMPUTED RESTART |
|---|
| 357 | #D- ONLY IF CumulPeriod= (=> NUMERO) == 1 |
|---|
| 358 | #D- MUST EXECUTE CREATE ETAT0_LIMIT (TYPICALLY LMDZ AND ./create_etat0_limit.e) |
|---|
| 359 | #D- |
|---|
| 360 | #D- IF CumulPeriod == 1 |
|---|
| 361 | #D- AND A COMPONENT RESTART FROM PREVIOULSY COMPUTED RESTART |
|---|
| 362 | #D- MUST BRING THIS RESTART IN ${RUN_DIR_PATH} |
|---|
| 363 | #D- |
|---|
| 364 | #D- ELSE BRING RESTART FROM ${JobName} IN ${RUN_DIR_PATH} |
|---|
| 365 | # ------------------------------------------------------------------ |
|---|
| 366 | IGCM_comp_GetInputRestartFiles |
|---|
| 367 | |
|---|
| 368 | #D- |
|---|
| 369 | # ------------------------------------------------------------------ |
|---|
| 370 | #D- Test if all was right before Update |
|---|
| 371 | # ------------------------------------------------------------------ |
|---|
| 372 | IGCM_debug_Verif_Exit |
|---|
| 373 | |
|---|
| 374 | # ------------------------------------------------------------------ |
|---|
| 375 | #D- Activate running environnement variables |
|---|
| 376 | # ------------------------------------------------------------------ |
|---|
| 377 | IGCM_sys_activ_variables |
|---|
| 378 | |
|---|
| 379 | #D- |
|---|
| 380 | # ------------------------------------------------------------------ |
|---|
| 381 | #D- UPDATE ParametersFiles (.def, namelist ...) with |
|---|
| 382 | #D- current value of (ORCA_NIT00, ORCA_LRSTAR, RAZ_DATE, ...) |
|---|
| 383 | # ------------------------------------------------------------------ |
|---|
| 384 | IGCM_comp_Update |
|---|
| 385 | |
|---|
| 386 | #D- |
|---|
| 387 | # ------------------------------------------------------------------ |
|---|
| 388 | #D- Test if all was right before execution |
|---|
| 389 | # ------------------------------------------------------------------ |
|---|
| 390 | IGCM_debug_Verif_Exit |
|---|
| 391 | |
|---|
| 392 | #D- |
|---|
| 393 | #D----------------------------------------------------------------== |
|---|
| 394 | #D- 3. Execution |
|---|
| 395 | #D----------------------------------------------------------------== |
|---|
| 396 | |
|---|
| 397 | echo |
|---|
| 398 | echo "#######################################" |
|---|
| 399 | echo "# DIR BEFORE RUN EXECUTION #" |
|---|
| 400 | echo "#######################################" |
|---|
| 401 | echo |
|---|
| 402 | ls -lrt |
|---|
| 403 | |
|---|
| 404 | echo "========================================================================" |
|---|
| 405 | if ( [ X${BATCH_NUM_PROC_TOT} != X ] && [ "${BATCH_NUM_PROC_TOT}" -gt 1 ] ) ; then |
|---|
| 406 | MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND} |
|---|
| 407 | eval MPIRUN_OPTIONS=${config_UserChoices_JobRunOptions} |
|---|
| 408 | else |
|---|
| 409 | MPIRUN_COMMAND=${MPIRUN_COMMAND:="time "} |
|---|
| 410 | MPIRUN_OPTIONS=${MPIRUN_OPTIONS:=""} |
|---|
| 411 | fi |
|---|
| 412 | |
|---|
| 413 | if [ ${DRYRUN} -le 1 ] ; then |
|---|
| 414 | REAL_DATE_INIT=$( date ) |
|---|
| 415 | echo "EXECUTION of : ${MPIRUN_COMMAND} ${MPIRUN_OPTIONS} ./${config_Executable_Name} > ${Exe_Output} 2>&1" |
|---|
| 416 | echo > ${Exe_Output} |
|---|
| 417 | echo "#######################################" >> ${Exe_Output} |
|---|
| 418 | echo "EXECUTION of : ${MPIRUN_COMMAND} ${MPIRUN_OPTIONS} ./${config_Executable_Name}" >> ${Exe_Output} |
|---|
| 419 | echo >> ${Exe_Output} |
|---|
| 420 | typeset RET |
|---|
| 421 | RUN_DATE_BEGIN=$( date '+%Y-%m-%dT%H:%M:%S' ) |
|---|
| 422 | ${MPIRUN_COMMAND} ${MPIRUN_OPTIONS} ./${config_Executable_Name} >> ${Exe_Output} 2>&1 |
|---|
| 423 | RET=$? |
|---|
| 424 | RUN_DATE_END=$( date '+%Y-%m-%dT%H:%M:%S' ) |
|---|
| 425 | if [ ${RET} -gt 0 ] ; then |
|---|
| 426 | echo "Return code of executable :" ${RET} |
|---|
| 427 | IGCM_debug_Exit "EXECUTABLE" |
|---|
| 428 | IGCM_sys_Cp ${Exe_Output} ${SUBMIT_DIR}/${PREFIX}_${Exe_Output}_error |
|---|
| 429 | fi |
|---|
| 430 | echo >> ${Exe_Output} |
|---|
| 431 | echo "#######################################" >> ${Exe_Output} |
|---|
| 432 | echo "libIGCM RunDateBegin=${RUN_DATE_BEGIN}" >> ${Exe_Output} |
|---|
| 433 | echo "libIGCM RunDateEnd=${RUN_DATE_END}" >> ${Exe_Output} |
|---|
| 434 | echo >> ${Exe_Output} |
|---|
| 435 | else |
|---|
| 436 | echo "EXECUTION of : ${MPIRUN_COMMAND} ${MPIRUN_OPTIONS} ./${config_Executable_Name} simulated for DRYRUN = " $DRYRUN |
|---|
| 437 | if ( $DEBUG_debug ) ; then |
|---|
| 438 | echo "FOR EXECUTION DRYRUN mode = " $DRYRUN >> stack |
|---|
| 439 | fi |
|---|
| 440 | fi |
|---|
| 441 | echo "========================================================================" |
|---|
| 442 | |
|---|
| 443 | echo |
|---|
| 444 | echo "#######################################" |
|---|
| 445 | echo "# DIR AFTER RUN EXECUTION #" |
|---|
| 446 | echo "#######################################" |
|---|
| 447 | echo |
|---|
| 448 | ls -lrt |
|---|
| 449 | |
|---|
| 450 | #D- |
|---|
| 451 | # ------------------------------------------------------------------ |
|---|
| 452 | #D- Desactivate running environnement variables |
|---|
| 453 | # ------------------------------------------------------------------ |
|---|
| 454 | IGCM_sys_desactiv_variables |
|---|
| 455 | |
|---|
| 456 | #D- |
|---|
| 457 | #D----------------------------------------------------------------== |
|---|
| 458 | #D- 4. Post execution operations |
|---|
| 459 | #D----------------------------------------------------------------== |
|---|
| 460 | |
|---|
| 461 | #D- |
|---|
| 462 | # ------------------------------------------------------------------ |
|---|
| 463 | #D- Save on archive machine netcdf outputs, restarts |
|---|
| 464 | #D- and text files of models |
|---|
| 465 | # ------------------------------------------------------------------ |
|---|
| 466 | IGCM_comp_Finalize |
|---|
| 467 | |
|---|
| 468 | #D- |
|---|
| 469 | # ------------------------------------------------------------------ |
|---|
| 470 | #D- Test if all was right after Finalize |
|---|
| 471 | # ------------------------------------------------------------------ |
|---|
| 472 | IGCM_debug_Verif_Exit |
|---|
| 473 | |
|---|
| 474 | #D- |
|---|
| 475 | # ------------------------------------------------------------------ |
|---|
| 476 | #D- Launch remote rebuild or/and post-treatment process if necessary |
|---|
| 477 | # ------------------------------------------------------------------ |
|---|
| 478 | IGCM_post_Configure |
|---|
| 479 | |
|---|
| 480 | #D- |
|---|
| 481 | # ------------------------------------------------------------------ |
|---|
| 482 | #D- Save job output |
|---|
| 483 | #D- Manage executable size to save only different binary |
|---|
| 484 | #D- Write in run.card user, system and elapse time |
|---|
| 485 | #D- Check that everything went well ! No ? then we stop. |
|---|
| 486 | #D- Determine next computed period |
|---|
| 487 | # ------------------------------------------------------------------ |
|---|
| 488 | IGCM_config_PeriodEnd |
|---|
| 489 | |
|---|
| 490 | echo "Ending iteration ${Period}" |
|---|
| 491 | (( Period = Period + 1 )) |
|---|
| 492 | |
|---|
| 493 | # End loop if date end is reached |
|---|
| 494 | if [ ${SimulationLengthInDays} -ge ${ExperienceLengthInDays} ] ; then |
|---|
| 495 | break ; |
|---|
| 496 | fi |
|---|
| 497 | |
|---|
| 498 | PeriodContinue=false |
|---|
| 499 | if [ ${Period} -le ${PeriodNb} ]; then |
|---|
| 500 | PeriodContinue=true |
|---|
| 501 | fi |
|---|
| 502 | done |
|---|
| 503 | |
|---|
| 504 | #D- |
|---|
| 505 | #D--------------------------------------------------------------------== |
|---|
| 506 | #D- 5. Submit next job or send mail if simulation over. |
|---|
| 507 | #D--------------------------------------------------------------------== |
|---|
| 508 | IGCM_config_Finalize |
|---|
| 509 | |
|---|
| 510 | date |
|---|
