1 | #!/bin/ksh |
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2 | |
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3 | #************************************************************** |
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4 | # Author: Sebastien Denvil, Martial Mancip |
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5 | # Contact: Martial.Mancip_ipsl.jussieu.fr |
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6 | # $Date$ |
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7 | # $Author$ |
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8 | # $Revision$ |
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9 | # IPSL (2006) |
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10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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11 | # History: |
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12 | # Modification: |
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13 | # |
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14 | #************************************************************** |
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15 | |
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16 | #========================================================= |
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17 | # The documentation of this file can be automatically generated |
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18 | # if you use the prefix #D- for comments to be extracted. |
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19 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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20 | #========================================================= |
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21 | |
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22 | #D-#================================================== |
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23 | #D-LibIGCM_sys for Mercure SX8-R |
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24 | #D-#================================================== |
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25 | #D- |
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26 | #D- This ksh library if a layer under some usefull |
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27 | #D-environment variables and shell commands. |
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28 | #D-All those definitions depend on host particularities. |
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29 | #D-It manages a stack mechanism and test validity of operations. |
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30 | #D-All function described bellow must be prefixed by IGCM_sys. |
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31 | |
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32 | #==================================================== |
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33 | # libIGCM_sys PARAMETERS |
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34 | #==================================================== |
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35 | |
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36 | # gawk specific location on SX9 |
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37 | export PATH=/applications/gawk-3.0.4/bin:${PATH} |
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38 | |
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39 | #==================================================== |
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40 | # set DEBUG_sys to true to output calls of function |
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41 | typeset -r DEBUG_sys=${DEBUG_sys:=true} |
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42 | |
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43 | #==================================================== |
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44 | # Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get) |
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45 | typeset -r DRYRUN=${DRYRUN:=0} |
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46 | |
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47 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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48 | # ------------------------------------------------------------------------------------- |
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49 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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50 | # | | Cp/Exe param files | | Chmod | | |
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51 | # | | Qsub | | | | |
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52 | # ------------------------------------------------------------------------------------- |
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53 | # | 0 | yes | yes | yes | yes | |
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54 | # ------------------------------------------------------------------------------------- |
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55 | # | 1 | yes | yes | yes | no | |
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56 | # ------------------------------------------------------------------------------------- |
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57 | # | 2 | yes | yes | no | no | |
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58 | # ------------------------------------------------------------------------------------- |
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59 | # | 3 | yes | no | no | no | |
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60 | # ------------------------------------------------------------------------------------- |
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61 | |
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62 | #===================================================== |
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63 | # Global Variables : |
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64 | #===================================================== |
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65 | # Language : "fr" or "en" |
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66 | typeset -r MYLANG="fr" |
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67 | |
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68 | #===================================================== |
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69 | # Host and user names |
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70 | # $hostname ou hostname |
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71 | typeset HOST=${HOST:=$( hostname )} |
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72 | # $username ou whoami |
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73 | typeset LOGIN=${LOGIN:=$( whoami )} |
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74 | # $hostname of the MASTER job |
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75 | typeset -r MASTER=mercure-old |
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76 | |
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77 | #D- |
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78 | #D-#================================================== |
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79 | #D-Program used in libIGCM |
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80 | #D-#================================================== |
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81 | |
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82 | # rsync with path |
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83 | typeset -r RSYNC=/home/cont003/p86denv/SX_RSYNC/bin/rsync |
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84 | # RSYNC_opt args to rsync |
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85 | typeset -r RSYNC_opt="-va" |
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86 | # ie storage filesystem |
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87 | typeset -r RHOST=mercure |
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88 | |
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89 | #==================================================== |
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90 | # Host specific DIRECTORIES |
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91 | #==================================================== |
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92 | |
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93 | #==================================================== |
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94 | #- R_EXE (==> BIN_DIR = ${MODIPSL}/bin ) |
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95 | typeset -r R_EXE="${MODIPSL}/bin" |
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96 | |
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97 | #==================================================== |
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98 | #- SUBMIT_DIR : submission dir |
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99 | typeset SUBMIT_DIR=${SUBMIT_DIR:=${PBS_O_WORKDIR}} |
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100 | |
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101 | #==================================================== |
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102 | #- ARCHIVE |
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103 | typeset -r ARCHIVE=${DMFDIR} |
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104 | |
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105 | # ============ CESIUM START ============ # |
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106 | |
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107 | #==================================================== |
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108 | #- Mirror libIGCM from mercure to cesium if needed |
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109 | #ROOTSYS=$( echo ${libIGCM} | gawk -F"/" '{print $2}' ) |
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110 | #if [ ! ${ROOTSYS} = "home" ] ; then |
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111 | # typeset -r MirrorlibIGCM=${MirrorlibIGCM:=true} |
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112 | #else |
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113 | # typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false} |
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114 | #fi |
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115 | |
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116 | #==================================================== |
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117 | #- libIGCM_POST |
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118 | #if ( ${MirrorlibIGCM} ) ; then |
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119 | # PATHlibIGCM=$( echo ${libIGCM} | gawk -F"${LOGIN}/" '{print $2}' | sed -e "s&/libIGCM&&" ) |
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120 | # typeset -r libIGCM_POST=${HOME}/MIRROR/${PATHlibIGCM}/libIGCM |
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121 | #else |
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122 | # typeset -r libIGCM_POST=${libIGCM} |
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123 | #fi |
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124 | |
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125 | # ============ CESIUM END ============ # |
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126 | |
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127 | #==================================================== |
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128 | #- Mirror libIGCM from mercure to cesium if needed |
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129 | typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false} |
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130 | |
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131 | #==================================================== |
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132 | #- libIGCM_POST |
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133 | typeset -r libIGCM_POST=${libIGCM} |
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134 | |
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135 | #==================================================== |
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136 | #- IN |
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137 | typeset -r R_IN=${R_IN:=/dmnfs/cont003/p86ipsl/IGCM} |
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138 | |
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139 | #==================================================== |
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140 | #- OUT |
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141 | typeset -r R_OUT=${ARCHIVE}/IGCM_OUT |
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142 | |
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143 | #==================================================== |
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144 | #- OUT_POST |
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145 | typeset -r R_OUT_POST=${SCRATCHDIR}/IGCM_OUT |
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146 | |
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147 | #==================================================== |
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148 | #- RUN_DIR_PATH : Temporary working directory (=> TMP) |
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149 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${LOCALTMPDIR}} |
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150 | |
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151 | #==================================================== |
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152 | #- BIG_DIR : BIG_DIR to store files waiting for rebuild |
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153 | typeset -r BIG_DIR=${BIG_DIR:=${SCRATCHDIR}/REBUILD} |
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154 | |
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155 | #==================================================== |
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156 | #- HOST_MPIRUN_COMMAND |
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157 | typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="mpirun"} |
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158 | |
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159 | #==================================================== |
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160 | #- Max number of arguments passed to nco operator or demigration command |
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161 | UNIX_MAX_LIMIT=360 |
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162 | |
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163 | #D-#================================================== |
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164 | #D-function IGCM_sys_RshArchive |
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165 | #D-* Purpose: Archive rsh command |
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166 | #D-* Examples: |
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167 | #D- |
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168 | function IGCM_sys_RshArchive { |
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169 | IGCM_debug_PushStack "IGCM_sys_RshArchive" $@ |
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170 | /bin/ksh <<-EOF |
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171 | ${@} |
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172 | EOF |
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173 | if [ $? -gt 0 ] ; then |
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174 | echo "IGCM_sys_RshArchive : erreur." |
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175 | IGCM_debug_Exit "IGCM_sys_RshArchive" |
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176 | fi |
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177 | IGCM_debug_PopStack "IGCM_sys_RshArchive" |
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178 | } |
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179 | |
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180 | #D-#================================================== |
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181 | #D-function IGCM_sys_RshPost |
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182 | #D-* Purpose: Post-process rsh command |
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183 | #D-* Examples: |
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184 | #D- |
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185 | function IGCM_sys_RshPost { |
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186 | IGCM_debug_PushStack "IGCM_sys_RshPost" $@ |
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187 | if ( $DEBUG_sys ) ; then |
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188 | echo "IGCM_sys_RshPost :" $@ |
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189 | fi |
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190 | |
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191 | # ============ CESIUM START ============ # |
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192 | # typeset NB_ESSAI DELAI status |
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193 | # #nombre d'essai avant abandon |
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194 | # NB_ESSAI=5 |
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195 | # #temps entre chaque essai |
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196 | # DELAI=10 |
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197 | # i=0 |
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198 | # while [ $i -ne $NB_ESSAI ] ; do |
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199 | # ssh -t mercure ssh cesium /bin/ksh ${@} 2>/dev/null |
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200 | # status=$? |
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201 | # if [ ${status} -ne 0 ]; |
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202 | # then |
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203 | # sleep $DELAI |
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204 | # else |
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205 | # break |
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206 | # fi |
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207 | # let i=$i+1 |
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208 | # done |
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209 | # ============ CESIUM END ============ # |
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210 | |
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211 | |
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212 | /bin/ksh ${@} |
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213 | if [ $? -gt 0 ] ; then |
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214 | echo "IGCM_sys_RshPost : erreur." |
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215 | IGCM_debug_Exit "IGCM_sys_RshPost" |
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216 | fi |
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217 | IGCM_debug_PopStack "IGCM_sys_RshPost" |
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218 | } |
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219 | |
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220 | #D-#================================================== |
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221 | #D-function IGCM_sys_SendMail |
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222 | #D-* Purpose: Send mail when simulation is over |
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223 | #D-* Examples: |
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224 | #D- |
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225 | function IGCM_sys_SendMail { |
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226 | IGCM_debug_PushStack "IGCM_sys_SendMailPost" $@ |
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227 | if ( $DEBUG_sys ) ; then |
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228 | echo "IGCM_sys_SendMail :" $@ |
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229 | fi |
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230 | |
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231 | ssh mercure-old /bin/ksh <<-EOF |
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232 | export LOGIN=${LOGIN} |
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233 | export config_UserChoices_JobName=${config_UserChoices_JobName} |
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234 | export config_UserChoices_MailName=${config_UserChoices_MailName} |
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235 | export DateBegin=${DateBegin} |
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236 | export DateEnd=${DateEnd} |
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237 | export R_SAVE=${R_SAVE} |
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238 | export SUBMIT_DIR=${SUBMIT_DIR} |
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239 | |
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240 | cat << END_MAIL > job_end.mail |
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241 | Dear ${LOGIN}, |
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242 | |
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243 | Simulation ${config_UserChoices_JobName} is finished on supercomputer `hostname`. |
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244 | Job started : ${DateBegin} |
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245 | Job ended : ${DateEnd} |
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246 | Ouput files are available in ${R_SAVE} |
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247 | Script files and Script Outputs are available in ${SUBMIT_DIR} |
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248 | END_MAIL |
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249 | |
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250 | if [ ! -z ${config_UserChoices_MailName} ] ; then |
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251 | mailx -s "${config_UserChoices_JobName} completed" ${config_UserChoices_MailName} < job_end.mail |
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252 | elif [ -f ~/.forward ] ; then |
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253 | mailx -s "${config_UserChoices_JobName} completed" $( cat ~/.forward ) < job_end.mail |
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254 | fi |
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255 | |
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256 | sleep 10 |
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257 | rm -f job_end.mail |
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258 | EOF |
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259 | |
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260 | if [ $? -gt 0 ] ; then |
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261 | echo "IGCM_sys_SendMail : erreur." |
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262 | IGCM_debug_Exit "IGCM_sys_SendMail" |
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263 | fi |
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264 | IGCM_debug_PopStack "IGCM_sys_SendMail" |
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265 | } |
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266 | |
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267 | #D-#================================================== |
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268 | #D-function IGCM_sys_Mkdir |
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269 | #D-* Purpose: Master locale mkdir command |
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270 | #D-* Examples: |
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271 | #D- |
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272 | function IGCM_sys_Mkdir { |
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273 | IGCM_debug_PushStack "IGCM_sys_Mkdir" $@ |
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274 | if ( $DEBUG_sys ) ; then |
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275 | echo "IGCM_sys_Mkdir :" $@ |
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276 | fi |
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277 | if [ ! -d ${1} ]; then |
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278 | \mkdir -p $1 |
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279 | if [ $? -gt 0 ] ; then |
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280 | echo "IGCM_sys_Mkdir : erreur." |
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281 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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282 | fi |
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283 | fi |
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284 | # vérification : |
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285 | if [ ! -d ${1} ] ; then |
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286 | echo "IGCM_sys_Mkdir : erreur." |
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287 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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288 | fi |
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289 | IGCM_debug_PopStack "IGCM_sys_Mkdir" |
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290 | } |
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291 | |
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292 | #D-#================================================== |
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293 | #D-function IGCM_sys_MkdirArchive |
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294 | #D-* Purpose: Mkdir on Archive |
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295 | #D-* Examples: |
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296 | #D- |
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297 | function IGCM_sys_MkdirArchive { |
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298 | IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@ |
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299 | if ( $DEBUG_sys ) ; then |
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300 | echo "IGCM_sys_MkdirArchive :" $@ |
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301 | fi |
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302 | #- creation de repertoire sur le serveur fichier |
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303 | if [ ! -d ${1} ]; then |
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304 | \mkdir -p $1 |
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305 | if [ $? -gt 0 ] ; then |
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306 | echo "IGCM_sys_MkdirArchive : erreur." |
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307 | IGCM_debug_Exit "IGCM_sys_MkdirArchive" |
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308 | fi |
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309 | fi |
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310 | IGCM_debug_PopStack "IGCM_sys_MkdirArchive" |
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311 | } |
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312 | |
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313 | #D-#================================================== |
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314 | #D-function IGCM_sys_MkdirWork |
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315 | #D-* Purpose: Mkdir on Work |
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316 | #D-* Examples: |
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317 | #D- |
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318 | function IGCM_sys_MkdirWork { |
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319 | IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@ |
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320 | if ( $DEBUG_sys ) ; then |
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321 | echo "IGCM_sys_MkdirWork :" $@ |
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322 | fi |
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323 | #- creation de repertoire sur le serveur fichier |
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324 | if [ ! -d ${1} ]; then |
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325 | \mkdir -p $1 |
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326 | if [ $? -gt 0 ] ; then |
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327 | echo "IGCM_sys_MkdirWork : erreur." |
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328 | IGCM_debug_Exit "IGCM_sys_MkdirWork" |
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329 | fi |
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330 | fi |
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331 | IGCM_debug_PopStack "IGCM_sys_MkdirWork" |
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332 | } |
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333 | |
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334 | #D-#================================================== |
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335 | #D-function IGCM_sys_Cd |
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336 | #D-* Purpose: master cd command |
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337 | #D-* Examples: |
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338 | #D- |
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339 | function IGCM_sys_Cd { |
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340 | IGCM_debug_PushStack "IGCM_sys_Cd" $@ |
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341 | if ( $DEBUG_sys ) ; then |
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342 | echo "IGCM_sys_Cd :" $@ |
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343 | fi |
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344 | \cd $1 |
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345 | if [ $? -gt 0 ] ; then |
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346 | echo "IGCM_sys_Cd : erreur." |
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347 | IGCM_debug_Exit "IGCM_sys_Cd" |
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348 | fi |
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349 | IGCM_debug_PopStack "IGCM_sys_Cd" |
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350 | } |
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351 | |
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352 | #D-#================================================== |
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353 | #D-function IGCM_sys_Chmod |
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354 | #D-* Purpose: Chmod |
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355 | #D-* Examples: |
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356 | #D- |
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357 | function IGCM_sys_Chmod { |
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358 | IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@ |
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359 | if ( $DEBUG_sys ) ; then |
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360 | echo "IGCM_sys_Chmod :" $@ |
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361 | fi |
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362 | if [ $DRYRUN -le 1 ]; then |
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363 | \chmod $@ |
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364 | if [ $? -gt 0 ] ; then |
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365 | echo "IGCM_sys_Chmod : erreur." |
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366 | IGCM_debug_Exit "IGCM_sys_Chmod" |
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367 | fi |
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368 | else |
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369 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
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370 | fi |
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371 | IGCM_debug_PopStack "IGCM_sys_Chmod" |
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372 | } |
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373 | |
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374 | #D-#================================================== |
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375 | #D-function IGCM_sys_FileSize |
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376 | #D-* Purpose: Filesize |
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377 | #D-* Examples: |
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378 | #D- |
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379 | function IGCM_sys_FileSize { |
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380 | IGCM_debug_PushStack "IGCM_sys_FileSize" $@ |
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381 | |
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382 | typeset sizeF |
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383 | set +A sizeF -- $( ls -la ${1} ) |
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384 | if [ $? -gt 0 ] ; then |
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385 | IGCM_debug_Exit "IGCM_sys_FileSize" |
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386 | fi |
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387 | eval ${2}=${sizeF[4]} |
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388 | |
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389 | IGCM_debug_PopStack "IGCM_sys_FileSize" |
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390 | } |
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391 | |
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392 | #D-#================================================== |
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393 | #D-function IGCM_sys_TestDir |
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394 | #D-* Purpose: Test Directory that must exists |
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395 | #D-* Examples: |
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396 | #D- |
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397 | function IGCM_sys_TestDir { |
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398 | IGCM_debug_PushStack "IGCM_sys_TestDir" $@ |
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399 | if ( $DEBUG_sys ) ; then |
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400 | echo "IGCM_sys_TestDir :" $@ |
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401 | fi |
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402 | typeset ExistFlag |
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403 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
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404 | IGCM_debug_PopStack "IGCM_sys_TestDir" |
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405 | |
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406 | return ${ExistFlag} |
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407 | } |
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408 | |
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409 | #D-#================================================== |
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410 | #D-function IGCM_sys_TestDirArchive |
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411 | #D-* Purpose: Test Directory that must exists on Archive |
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412 | #D-* Examples: |
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413 | #D- |
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414 | function IGCM_sys_TestDirArchive { |
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415 | IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@ |
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416 | if ( $DEBUG_sys ) ; then |
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417 | echo "IGCM_sys_TestDirArchive :" $@ |
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418 | fi |
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419 | typeset ExistFlag |
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420 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
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421 | IGCM_debug_PopStack "IGCM_sys_TestDirArchive" |
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422 | |
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423 | return ${ExistFlag} |
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424 | } |
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425 | |
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426 | #D-#================================================== |
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427 | #D-function IGCM_sys_TestFileArchive |
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428 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
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429 | #D-* Examples: |
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430 | #D- |
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431 | function IGCM_sys_TestFileArchive { |
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432 | IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@ |
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433 | typeset ExistFlag |
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434 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
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435 | IGCM_debug_PopStack "IGCM_sys_TestFileArchive" |
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436 | |
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437 | return ${ExistFlag} |
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438 | } |
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439 | |
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440 | #D-#================================================== |
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441 | #D-function IGCM_sys_CountFileArchive |
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442 | #D-* Purpose: Count files on Archive filesystem |
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443 | #D-* Examples: |
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444 | #D- |
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445 | function IGCM_sys_CountFileArchive { |
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446 | IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@ |
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447 | ls ${@} 2>/dev/null | wc -l |
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448 | if [ $? -gt 0 ] ; then |
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449 | echo "IGCM_sys_CountFileArchive : erreur." |
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450 | fi |
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451 | IGCM_debug_PopStack "IGCM_sys_CountFileArchive" |
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452 | } |
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453 | |
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454 | #D-#================================================== |
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455 | #D-function IGCM_sys_Tree |
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456 | #D-* Purpose: Tree directories with files on ${ARCHIVE} |
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457 | #D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT} |
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458 | #D- |
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459 | function IGCM_sys_Tree { |
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460 | IGCM_debug_PushStack "IGCM_sys_Tree" $@ |
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461 | if ( $DEBUG_sys ) ; then |
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462 | echo "IGCM_sys_Tree :" $@ |
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463 | fi |
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464 | |
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465 | \ls -lR ${@} |
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466 | |
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467 | IGCM_debug_PopStack "IGCM_sys_Tree" |
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468 | } |
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469 | |
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470 | #D-#================================================== |
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471 | #D-function IGCM_sys_Tar |
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472 | #D-* Purpose: master un-tar command |
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473 | #D-* Examples: |
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474 | #D- |
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475 | function IGCM_sys_Tar { |
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476 | IGCM_debug_PushStack "IGCM_sys_Tar" $@ |
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477 | if ( $DEBUG_sys ) ; then |
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478 | echo "IGCM_sys_Tar :" $@ |
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479 | fi |
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480 | \tar xvf $1 |
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481 | if [ $? -gt 0 ] ; then |
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482 | echo "IGCM_sys_Tar : erreur." |
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483 | IGCM_debug_Exit "IGCM_sys_Tar" |
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484 | fi |
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485 | IGCM_debug_PopStack "IGCM_sys_Tar" |
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486 | } |
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487 | |
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488 | #D-#================================================== |
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489 | #D-function IGCM_sys_UnTar |
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490 | #D-* Purpose: master un-tar command |
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491 | #D-* Examples: |
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492 | #D- |
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493 | function IGCM_sys_UnTar { |
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494 | IGCM_debug_PushStack "IGCM_sys_UnTar" $@ |
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495 | if ( $DEBUG_sys ) ; then |
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496 | echo "IGCM_sys_UnTar :" $@ |
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497 | fi |
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498 | \tar xvf $1 |
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499 | if [ $? -gt 0 ] ; then |
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500 | echo "IGCM_sys_UnTar : erreur." |
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501 | IGCM_debug_Exit "IGCM_sys_UnTar" |
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502 | fi |
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503 | IGCM_debug_PopStack "IGCM_sys_UnTar" |
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504 | } |
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505 | |
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506 | #D-#================================================== |
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507 | #D-function IGCM_sys_Qsub |
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508 | #D-* Purpose: Qsub new job |
---|
509 | #D-* Examples: |
---|
510 | #D- |
---|
511 | function IGCM_sys_Qsub { |
---|
512 | IGCM_debug_PushStack "IGCM_sys_Qsub" $@ |
---|
513 | if ( $DEBUG_sys ) ; then |
---|
514 | echo "IGCM_sys_Qsub :" $@ |
---|
515 | fi |
---|
516 | /usr/bin/nqsII/qsub -o ${Script_Output} -N ${config_UserChoices_JobName}.${CumulPeriod} < $1 |
---|
517 | if [ $? -gt 0 ] ; then |
---|
518 | echo "IGCM_sys_Qsub : erreur -o ${Script_Output} -N ${config_UserChoices_JobName}.${CumulPeriod} $@." |
---|
519 | IGCM_debug_Exit "IGCM_sys_Qsub" |
---|
520 | fi |
---|
521 | IGCM_debug_PopStack "IGCM_sys_Qsub" |
---|
522 | } |
---|
523 | |
---|
524 | #D-#================================================== |
---|
525 | #D-function IGCM_sys_QsubPost |
---|
526 | #D-* Purpose: Qsub new job on scalaire |
---|
527 | #D-* Examples: |
---|
528 | #D- |
---|
529 | function IGCM_sys_QsubPost { |
---|
530 | IGCM_debug_PushStack "IGCM_sys_QsubPost" $@ |
---|
531 | if ( $DEBUG_sys ) ; then |
---|
532 | echo "IGCM_sys_QsubPost :" $@ |
---|
533 | fi |
---|
534 | # ============ CESIUM START ============ # |
---|
535 | #/usr/local/bin/ccc_msub -o ${POST_DIR}/$1.${PeriodDateEnd}.out -e ${POST_DIR}/$1.${PeriodDateEnd}.e.out -E "-v ${listVarEnv}" ${libIGCM_POST}/$1.job |
---|
536 | # ============ CESIUM END ============ # |
---|
537 | /usr/bin/nqsII/qsub -o ${POST_DIR}/$1.${PeriodDateEnd}.out ${libIGCM}/$1.job -v ${listVarEnv} |
---|
538 | if [ $? -gt 0 ] ; then |
---|
539 | echo "IGCM_sys_QsubPost : erreur " $@ |
---|
540 | IGCM_debug_Exit "IGCM_sys_QsubPost" |
---|
541 | fi |
---|
542 | IGCM_debug_PopStack "IGCM_sys_QsubPost" |
---|
543 | } |
---|
544 | |
---|
545 | #D-************************* |
---|
546 | #D- File transfer functions |
---|
547 | #D-************************* |
---|
548 | #D- |
---|
549 | |
---|
550 | #D-#================================================== |
---|
551 | #D-function IGCM_sys_Rsync_out |
---|
552 | #D-* Purpose: treat return val of rsync |
---|
553 | #D-* Examples: IGCM_sys_Rsync_out out_RET_rsync |
---|
554 | #D- Error values and explanations can depend on your system version. |
---|
555 | function IGCM_sys_Rsync_out { |
---|
556 | RET=$1 |
---|
557 | if [ ! $RET ] ; then |
---|
558 | echo "rsync error !" |
---|
559 | fi |
---|
560 | |
---|
561 | if [ $MYLANG = "fr" ]; then |
---|
562 | case $RET in |
---|
563 | 0) return ;; |
---|
564 | 1) echo "Erreur de rsync ; RERR_SYNTAX : " |
---|
565 | echo "Erreur de syntaxe ou d'utilisation." |
---|
566 | return;; |
---|
567 | 2) echo "Erreur de rsync ; RERR_PROTOCOL : " |
---|
568 | echo "Incompatibilité de protocole." |
---|
569 | return;; |
---|
570 | 3) echo "Erreur de rsync ; RERR_FILESELECT 3" |
---|
571 | echo "Erreurs lors de la sélection des fichiers d'entrée sortie et" |
---|
572 | echo "répertoires" |
---|
573 | return;; |
---|
574 | 4) echo "Erreur de rsync ; RERR_UNSUPPORTED" |
---|
575 | echo "Action demandée non supportée : une tentative de manipulation de" |
---|
576 | echo "fichiers 64-bits sur une plate-forme qui ne les supporte pas a" |
---|
577 | echo "été faite ; ou une option qui est supportée par le client mais" |
---|
578 | echo "pas par le serveur a été spécifiée." |
---|
579 | return;; |
---|
580 | 10) echo "Erreur de rsync ; RERR_SOCKETIO" |
---|
581 | echo "Erreur dans le socket d'entrée sortie" |
---|
582 | return;; |
---|
583 | 11) echo "Erreur de rsync ; RERR_FILEIO" |
---|
584 | echo "Erreur d'entrée sortie fichier" |
---|
585 | return;; |
---|
586 | 12) echo "Erreur de rsync ; RERR_STREAMIO" |
---|
587 | echo "Erreur dans flux de donnée du protocole rsync" |
---|
588 | return;; |
---|
589 | 13) echo "Erreur de rsync ; RERR_MESSAGEIO" |
---|
590 | echo "Erreur avec les diagnostics du programme" |
---|
591 | return;; |
---|
592 | 14) echo "Erreur de rsync ; RERR_IPC" |
---|
593 | echo "Erreur dans le code IPC" |
---|
594 | return;; |
---|
595 | 20) echo "Erreur de rsync ; RERR_SIGNAL" |
---|
596 | echo "SIGUSR1 ou SIGINT reçu" |
---|
597 | return;; |
---|
598 | 21) echo "Erreur de rsync ; RERR_WAITCHILD" |
---|
599 | echo "Une erreur retournée par waitpid()" |
---|
600 | return;; |
---|
601 | 22) echo "Erreur de rsync ; RERR_MALLOC" |
---|
602 | echo "Erreur lors de l'allocation des tampons de mémoire de coeur" |
---|
603 | return;; |
---|
604 | 23) echo "" |
---|
605 | echo "Erreur fichier inexistant" |
---|
606 | return;; |
---|
607 | 30) echo "Erreur de rsync ; RERR_TIMEOUT" |
---|
608 | echo "Temps d'attente écoulé dans l'envoi/réception de données" |
---|
609 | return;; |
---|
610 | *) echo "Erreur de rsync : code de retour de rsync inconnu :" $RET |
---|
611 | return;; |
---|
612 | esac |
---|
613 | elif [ $MYLANG = "en" ] ; then |
---|
614 | case $RET in |
---|
615 | 0) return;; |
---|
616 | 1) echo "rsync error : Syntax or usage error " |
---|
617 | return;; |
---|
618 | 2) echo "rsync error : Protocol incompatibility " |
---|
619 | return;; |
---|
620 | 3) echo "rsync error : Errors selecting input/output files, dirs" |
---|
621 | return;; |
---|
622 | 4) echo "rsync error : Requested action not supported: an attempt" |
---|
623 | echo "was made to manipulate 64-bit files on a platform that cannot support" |
---|
624 | echo "them; or an option was specified that is supported by the client and" |
---|
625 | echo "not by the server." |
---|
626 | return;; |
---|
627 | 5) echo "rsync error : Error starting client-server protocol" |
---|
628 | return;; |
---|
629 | 10) echo "rsync error : Error in socket I/O " |
---|
630 | return;; |
---|
631 | 11) echo "rsync error : Error in file I/O " |
---|
632 | return;; |
---|
633 | 12) echo "rsync error : Error in rsync protocol data stream " |
---|
634 | return;; |
---|
635 | 13) echo "rsync error : Errors with program diagnostics " |
---|
636 | return;; |
---|
637 | 14) echo "rsync error : Error in IPC code " |
---|
638 | return;; |
---|
639 | 20) echo "rsync error : Received SIGUSR1 or SIGINT " |
---|
640 | return;; |
---|
641 | 21) echo "rsync error : Some error returned by waitpid() " |
---|
642 | return;; |
---|
643 | 22) echo "rsync error : Error allocating core memory buffers " |
---|
644 | return;; |
---|
645 | 23) echo "rsync error : Partial transfer due to error" |
---|
646 | return;; |
---|
647 | 24) echo "rsync error : Partial transfer due to vanished source files" |
---|
648 | return;; |
---|
649 | 30) echo "rsync error : Timeout in data send/receive " |
---|
650 | return;; |
---|
651 | *) echo "rsync error : return code of rsync unknown :" $RET |
---|
652 | return;; |
---|
653 | esac |
---|
654 | else |
---|
655 | echo "unknown language $MYLANG." |
---|
656 | return |
---|
657 | fi |
---|
658 | } |
---|
659 | |
---|
660 | |
---|
661 | #D-#================================================== |
---|
662 | #D-function IGCM_sys_Miror_libIGCM |
---|
663 | #D-* Purpose: Mirror libIGCM PATH and lib to cesium |
---|
664 | #D-* Examples: |
---|
665 | #D- |
---|
666 | function IGCM_sys_Mirror_libIGCM { |
---|
667 | IGCM_debug_PushStack "IGCM_sys_Mirror_libIGCM" |
---|
668 | if ( $DEBUG_sys ) ; then |
---|
669 | echo "IGCM_sys_Mirror_libIGCM" |
---|
670 | fi |
---|
671 | |
---|
672 | typeset RET DEST |
---|
673 | |
---|
674 | mkdir -p ${HOME}/MIRROR/${PATHlibIGCM} |
---|
675 | |
---|
676 | echo ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} > out_rsync 2>&1 |
---|
677 | ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} >> out_rsync 2>&1 |
---|
678 | RET=$? |
---|
679 | |
---|
680 | if [ ${RET} -gt 0 ] ; then |
---|
681 | echo "IGCM_sys_Mirror_libIGCM Warning : no libIGCM on cesium." |
---|
682 | cat out_rsync |
---|
683 | fi |
---|
684 | IGCM_debug_PopStack "IGCM_sys_Mirror_libIGCM" |
---|
685 | } |
---|
686 | |
---|
687 | #==================================================== |
---|
688 | #- Call IGCM_sys_Mirror_libIGCM now ! |
---|
689 | if ( $MirrorlibIGCM ) ; then |
---|
690 | IGCM_sys_Mirror_libIGCM |
---|
691 | fi |
---|
692 | |
---|
693 | #D-#================================================== |
---|
694 | #D-function IGCM_sys_Cp |
---|
695 | #D-* Purpose: generic cp |
---|
696 | #D-* Examples: |
---|
697 | #D- |
---|
698 | function IGCM_sys_Cp { |
---|
699 | IGCM_debug_PushStack "IGCM_sys_Cp" $@ |
---|
700 | if ( $DEBUG_sys ) ; then |
---|
701 | echo "IGCM_sys_Cp :" $@ |
---|
702 | fi |
---|
703 | |
---|
704 | typeset RET |
---|
705 | |
---|
706 | echo cp $@ > out_rsync 2>&1 |
---|
707 | \cp $@ >> out_rsync 2>&1 |
---|
708 | RET=$? |
---|
709 | |
---|
710 | if [ ${RET} -gt 0 ] ; then |
---|
711 | echo "IGCM_sys_Cp : error." |
---|
712 | cat out_rsync |
---|
713 | IGCM_debug_Exit "IGCM_sys_Cp" |
---|
714 | fi |
---|
715 | IGCM_debug_PopStack "IGCM_sys_Cp" |
---|
716 | } |
---|
717 | |
---|
718 | #D-#================================================== |
---|
719 | #D-function IGCM_sys_Rm |
---|
720 | #D-* Purpose: generic rm |
---|
721 | #D-* Examples: |
---|
722 | #D- |
---|
723 | function IGCM_sys_Rm { |
---|
724 | IGCM_debug_PushStack "IGCM_sys_Rm" -- $@ |
---|
725 | if ( $DEBUG_sys ) ; then |
---|
726 | echo "IGCM_sys_Rm :" $@ |
---|
727 | fi |
---|
728 | |
---|
729 | typeset RET |
---|
730 | |
---|
731 | echo rm $@ > out_rsync 2>&1 |
---|
732 | \rm $@ >> out_rsync 2>&1 |
---|
733 | RET=$? |
---|
734 | |
---|
735 | if [ ${RET} -gt 0 ] ; then |
---|
736 | echo "IGCM_sys_Rm : error." |
---|
737 | cat out_rsync |
---|
738 | IGCM_debug_Exit "IGCM_sys_Rm" |
---|
739 | fi |
---|
740 | IGCM_debug_PopStack "IGCM_sys_Rm" |
---|
741 | } |
---|
742 | |
---|
743 | #D-#================================================== |
---|
744 | #D-function IGCM_sys_Mv |
---|
745 | #D-* Purpose: generic move |
---|
746 | #D-* Examples: |
---|
747 | #D- |
---|
748 | function IGCM_sys_Mv { |
---|
749 | IGCM_debug_PushStack "IGCM_sys_Mv" $@ |
---|
750 | if ( $DEBUG_sys ) ; then |
---|
751 | echo "IGCM_sys_Mv :" $@ |
---|
752 | fi |
---|
753 | |
---|
754 | if [ $DRYRUN = 0 ]; then |
---|
755 | |
---|
756 | typeset RET |
---|
757 | |
---|
758 | echo mv $@ > out_rsync 2>&1 |
---|
759 | \mv $@ >> out_rsync 2>&1 |
---|
760 | RET=$? |
---|
761 | |
---|
762 | if [ ${RET} -gt 0 ] ; then |
---|
763 | echo "IGCM_sys_Mv : error in mv." |
---|
764 | cat out_rsync |
---|
765 | IGCM_debug_Exit "IGCM_sys_Mv" |
---|
766 | fi |
---|
767 | else |
---|
768 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
769 | fi |
---|
770 | |
---|
771 | IGCM_debug_PopStack "IGCM_sys_Mv" |
---|
772 | } |
---|
773 | |
---|
774 | #D-#================================================== |
---|
775 | #D-function IGCM_sys_Put_Dir |
---|
776 | #D-* Purpose: Copy a complete directory on $(ARCHIVE) |
---|
777 | #D-* Examples: |
---|
778 | #D- |
---|
779 | function IGCM_sys_Put_Dir { |
---|
780 | IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@ |
---|
781 | if ( $DEBUG_sys ) ; then |
---|
782 | echo "IGCM_sys_Put_Dir :" $@ |
---|
783 | fi |
---|
784 | if [ $DRYRUN = 0 ]; then |
---|
785 | if [ ! -d ${1} ] ; then |
---|
786 | echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ." |
---|
787 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
788 | return |
---|
789 | fi |
---|
790 | |
---|
791 | typeset RET |
---|
792 | |
---|
793 | # Only if we use rsync |
---|
794 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
795 | # |
---|
796 | #USUAL WAY |
---|
797 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
798 | RET=$? |
---|
799 | |
---|
800 | if [ ${RET} -gt 0 ] ; then |
---|
801 | echo "IGCM_sys_Put_Dir : error." |
---|
802 | cat out_rsync |
---|
803 | IGCM_debug_Exit "IGCM_sys_Put_Dir" |
---|
804 | fi |
---|
805 | else |
---|
806 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
807 | fi |
---|
808 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
809 | } |
---|
810 | |
---|
811 | #D-#================================================== |
---|
812 | #D-function IGCM_sys_Get_Dir |
---|
813 | #D-* Purpose: Copy a complete directory from $(ARCHIVE) |
---|
814 | #D-* Examples: |
---|
815 | #D- |
---|
816 | function IGCM_sys_Get_Dir { |
---|
817 | IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@ |
---|
818 | if ( $DEBUG_sys ) ; then |
---|
819 | echo "IGCM_sys_Get_Dir :" $@ |
---|
820 | fi |
---|
821 | if [ $DRYRUN = 0 ]; then |
---|
822 | if [ ! -d ${1} ] ; then |
---|
823 | echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ." |
---|
824 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
825 | return |
---|
826 | fi |
---|
827 | |
---|
828 | typeset RET |
---|
829 | |
---|
830 | # Only if we use rsync |
---|
831 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
832 | # |
---|
833 | #USUAL WAY |
---|
834 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
835 | RET=$? |
---|
836 | |
---|
837 | if [ ${RET} -gt 0 ] ; then |
---|
838 | echo "IGCM_sys_Get_Dir : error." |
---|
839 | cat out_rsync |
---|
840 | IGCM_debug_Exit "IGCM_sys_Get_Dir" |
---|
841 | fi |
---|
842 | else |
---|
843 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
844 | fi |
---|
845 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
846 | } |
---|
847 | |
---|
848 | #D-#================================================== |
---|
849 | #D-function IGCM_sys_Put_Rest |
---|
850 | #D-* Purpose: Put computied restarts on $(ARCHIVE). |
---|
851 | #D- File and target directory must exist. |
---|
852 | #D-* Examples: |
---|
853 | #D- |
---|
854 | function IGCM_sys_Put_Rest { |
---|
855 | IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@ |
---|
856 | if ( $DEBUG_sys ) ; then |
---|
857 | echo "IGCM_sys_Put_Rest :" $@ |
---|
858 | fi |
---|
859 | if [ $DRYRUN = 0 ]; then |
---|
860 | if [ ! -f ${1} ] ; then |
---|
861 | echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ." |
---|
862 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
863 | fi |
---|
864 | |
---|
865 | typeset RET |
---|
866 | # |
---|
867 | if [ X${JobType} = XRUN ] ; then |
---|
868 | IGCM_sys_Chmod 444 ${1} |
---|
869 | fi |
---|
870 | # |
---|
871 | IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
872 | # |
---|
873 | # USUAL WAY |
---|
874 | putfer $1 $2 > out_rsync 2>&1 |
---|
875 | RET=$? |
---|
876 | |
---|
877 | # #RSYNC WITH NETWORK SSH CALL |
---|
878 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1 |
---|
879 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1 |
---|
880 | |
---|
881 | # #RSYNC WITH NFS USE |
---|
882 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
883 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
884 | |
---|
885 | # RET=$? |
---|
886 | # IGCM_sys_Rsync_out $RET |
---|
887 | |
---|
888 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
889 | # (( RET=RET+$? )) |
---|
890 | |
---|
891 | if [ ${RET} -gt 0 ] ; then |
---|
892 | echo "IGCM_sys_Put_Rest : error." |
---|
893 | cat out_rsync |
---|
894 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
895 | fi |
---|
896 | else |
---|
897 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
898 | fi |
---|
899 | IGCM_debug_PopStack "IGCM_sys_Put_Rest" |
---|
900 | } |
---|
901 | |
---|
902 | #D-#================================================== |
---|
903 | #D-function IGCM_sys_Put_Out |
---|
904 | #D-* Purpose: Copy a file on $(ARCHIVE) after have chmod it in readonly |
---|
905 | #D-* Examples: |
---|
906 | #D- |
---|
907 | function IGCM_sys_Put_Out { |
---|
908 | IGCM_debug_PushStack "IGCM_sys_Put_Out" $@ |
---|
909 | if ( $DEBUG_sys ) ; then |
---|
910 | echo "IGCM_sys_Put_Out :" $@ |
---|
911 | fi |
---|
912 | if [ $DRYRUN = 0 ]; then |
---|
913 | if [ ! -f ${1} ] ; then |
---|
914 | echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ." |
---|
915 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
916 | return 1 |
---|
917 | fi |
---|
918 | # |
---|
919 | IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
920 | # |
---|
921 | typeset RET |
---|
922 | |
---|
923 | #===================================================== |
---|
924 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
925 | #===================================================== |
---|
926 | |
---|
927 | #echo ${2} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
928 | #if [ $? -eq 0 ] ; then |
---|
929 | # typeset WORKPATH FILEPATH |
---|
930 | # WORKPATH=$( dirname $2 | sed -e "s|${R_OUT}|${R_OUT_SCR}|" ) |
---|
931 | # IGCM_sys_MkdirWork ${WORKPATH} |
---|
932 | # FILEPATH=${WORKPATH}/$( basename $2 ) |
---|
933 | # # |
---|
934 | # IGCM_sys_Cp ${1} ${FILEPATH} |
---|
935 | #fi |
---|
936 | |
---|
937 | if [ X${JobType} = XRUN ] ; then |
---|
938 | if [ X${3} = X ] ; then |
---|
939 | IGCM_sys_Chmod 444 ${1} |
---|
940 | fi |
---|
941 | fi |
---|
942 | # |
---|
943 | # USUAL WAY |
---|
944 | putfer $1 $2 > out_rsync 2>&1 |
---|
945 | RET=$? |
---|
946 | |
---|
947 | # #RSYNC WITH NETWORK SSH CALL |
---|
948 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1 |
---|
949 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1 |
---|
950 | |
---|
951 | # #RSYNC WITH NFS USE |
---|
952 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
953 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
954 | |
---|
955 | # RET=$? |
---|
956 | # IGCM_sys_Rsync_out $RET |
---|
957 | |
---|
958 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
959 | # (( RET=RET+$? )) |
---|
960 | |
---|
961 | if [ ${RET} -gt 0 ] ; then |
---|
962 | echo "IGCM_sys_Put_Out : error." |
---|
963 | cat out_rsync |
---|
964 | IGCM_debug_Exit "IGCM_sys_Put_Out" |
---|
965 | fi |
---|
966 | else |
---|
967 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
968 | fi |
---|
969 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
970 | return 0 |
---|
971 | } |
---|
972 | |
---|
973 | #D-#================================================== |
---|
974 | #D-function IGCM_sys_Get |
---|
975 | #D-* Purpose: Get a file from ${ARCHIVE} |
---|
976 | #D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX |
---|
977 | #D- IGCM_sys_Get /l Array_contain_myfiles /destpath/ |
---|
978 | function IGCM_sys_Get { |
---|
979 | IGCM_debug_PushStack "IGCM_sys_Get" $@ |
---|
980 | |
---|
981 | typeset DEST RET dm_liste ifile target file_work |
---|
982 | |
---|
983 | if ( $DEBUG_sys ) ; then |
---|
984 | echo "IGCM_sys_Get :" $@ |
---|
985 | fi |
---|
986 | if [ $DRYRUN -le 2 ]; then |
---|
987 | if [ X${1} = X'/l' ] ; then |
---|
988 | # test if the first file is present in the old computation : |
---|
989 | eval set +A dm_liste \${${2}} |
---|
990 | else |
---|
991 | eval set +A dm_liste ${1} |
---|
992 | fi |
---|
993 | eval DEST=\${${#}} |
---|
994 | |
---|
995 | #===================================================== |
---|
996 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
997 | #===================================================== |
---|
998 | |
---|
999 | # Is it an R_OUT file (not R_IN) ? |
---|
1000 | #echo ${dm_liste[0]} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
1001 | #if [ $? -eq 0 ] ; then |
---|
1002 | # # Yes ? then we try to get it in SCRATCHDIR |
---|
1003 | # set +A file_work $( echo ${dm_liste[*]} | sed -e "s|${R_OUT}|${R_OUT_SCR}|" ) |
---|
1004 | # if [ -f ${file_work[0]} ] ; then |
---|
1005 | # IGCM_sys_Cp ${file_work[*]} ${DEST} |
---|
1006 | # IGCM_debug_PopStack "IGCM_sys_Get" |
---|
1007 | # return |
---|
1008 | # fi |
---|
1009 | #fi |
---|
1010 | |
---|
1011 | # test if the (first) file is present in the old computation : |
---|
1012 | IGCM_sys_TestFileArchive ${dm_liste[0]} |
---|
1013 | RET=$? |
---|
1014 | if [ ${RET} -gt 0 ] ; then |
---|
1015 | echo "IGCM_sys_Get, ERROR : regular file ${dm_liste[0]} DOES NOT EXIST ." |
---|
1016 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
1017 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
1018 | return |
---|
1019 | fi |
---|
1020 | |
---|
1021 | dmget ${dm_liste[*]} > out_rsync 2>&1 |
---|
1022 | RET=$? |
---|
1023 | if [ ${RET} -gt 0 ] ; then |
---|
1024 | echo "IGCM_sys_Get : demigration error." |
---|
1025 | cat out_rsync |
---|
1026 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
1027 | fi |
---|
1028 | |
---|
1029 | #USUAL WAY |
---|
1030 | if [ X${1} = X'/l' ] ; then |
---|
1031 | (( RET=0 )) |
---|
1032 | for target in ${dm_liste[*]} ; do |
---|
1033 | local_file=$( basename ${target} ) |
---|
1034 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
1035 | (( RET = RET + $? )) |
---|
1036 | done |
---|
1037 | else |
---|
1038 | \cp ${dm_liste} ${DEST} >> out_rsync 2>&1 |
---|
1039 | RET=$? |
---|
1040 | fi |
---|
1041 | |
---|
1042 | # #RSYNC WITH NETWORK SSH CALL |
---|
1043 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
1044 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
1045 | |
---|
1046 | # #RSYNC WITH NFS USE |
---|
1047 | # echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
1048 | # ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
1049 | |
---|
1050 | # RET=$? |
---|
1051 | # IGCM_sys_Rsync_out $RET |
---|
1052 | |
---|
1053 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
1054 | # (( RET=RET+$? )) |
---|
1055 | |
---|
1056 | if [ ${RET} -gt 0 ] ; then |
---|
1057 | echo "IGCM_sys_Get : copy error." |
---|
1058 | cat out_rsync |
---|
1059 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
1060 | fi |
---|
1061 | else |
---|
1062 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
1063 | fi |
---|
1064 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
1065 | } |
---|
1066 | |
---|
1067 | ############################################################## A FINIR !! |
---|
1068 | |
---|
1069 | #D-#================================================== |
---|
1070 | #D-function IGCM_sys_GetDate_FichWork |
---|
1071 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK |
---|
1072 | #D-* Examples: |
---|
1073 | #D- |
---|
1074 | function IGCM_sys_GetDate_FichWork { |
---|
1075 | IGCM_debug_PushStack "IGCM_sys_FichWork" $@ |
---|
1076 | if ( $DEBUG_sys ) ; then |
---|
1077 | echo "IGCM_sys_GetDate_FichWork :" $@ |
---|
1078 | fi |
---|
1079 | # donne la date filesys d'un fichier sur la machine work |
---|
1080 | IGCM_debug_PopStack "IGCM_sys_FichWork" |
---|
1081 | } |
---|
1082 | |
---|
1083 | #D-#================================================== |
---|
1084 | #D-function IGCM_sys_GetDate_FichArchive |
---|
1085 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE |
---|
1086 | #D-* Examples: |
---|
1087 | #D- |
---|
1088 | function IGCM_sys_GetDate_FichArchive { |
---|
1089 | IGCM_debug_PushStack "IGCM_sys_FichArchive" $@ |
---|
1090 | if ( $DEBUG_sys ) ; then |
---|
1091 | echo "IGCM_sys_GetDate_FichArchive :" $@ |
---|
1092 | fi |
---|
1093 | IGCM_debug_PopStack "IGCM_sys_FichArchive" |
---|
1094 | } |
---|
1095 | |
---|
1096 | ############################################################## |
---|
1097 | # REBUILD OPERATOR |
---|
1098 | |
---|
1099 | function IGCM_sys_rebuild { |
---|
1100 | IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@ |
---|
1101 | if ( $DEBUG_sys ) ; then |
---|
1102 | echo "IGCM_sys_rebuild :" $@ |
---|
1103 | fi |
---|
1104 | /home/cont003/p86ipsl/SX8/bin/rebuild -f -o $@ |
---|
1105 | if [ $? -gt 0 ] ; then |
---|
1106 | echo "IGCM_sys_rebuild : erreur ${@}." |
---|
1107 | IGCM_debug_Exit "rebuild" |
---|
1108 | fi |
---|
1109 | |
---|
1110 | IGCM_debug_PopStack "IGCM_sys_rebuild" |
---|
1111 | } |
---|
1112 | |
---|
1113 | ############################################################ |
---|
1114 | # Activate Running Environnment Variables |
---|
1115 | |
---|
1116 | function IGCM_sys_activ_variables { |
---|
1117 | IGCM_debug_PushStack "IGCM_sys_activ_variables" |
---|
1118 | if ( $DEBUG_sys ) ; then |
---|
1119 | echo "IGCM_sys_activ_variables" |
---|
1120 | fi |
---|
1121 | |
---|
1122 | # -------------------------------------------------------------------- |
---|
1123 | #D- MPI specifications |
---|
1124 | # -------------------------------------------------------------------- |
---|
1125 | |
---|
1126 | #D-- MPISUSPEND |
---|
1127 | export MPISUSPEND=${MPISUSPEND:=OFF} |
---|
1128 | |
---|
1129 | #D-- MPIPROGINF #other choices : ALL_DETAIL2 |
---|
1130 | export MPIPROGINF=ALL |
---|
1131 | #D- activate ftrace (with -ftrace) |
---|
1132 | export F_FTRACE=YES |
---|
1133 | #D- communication information (with -ftrace) |
---|
1134 | export MPICOMMINF=DETAIL |
---|
1135 | |
---|
1136 | # -------------------------------------------------------------------- |
---|
1137 | #D- Other specifications |
---|
1138 | # -------------------------------------------------------------------- |
---|
1139 | |
---|
1140 | #D- max number of character/line in output job |
---|
1141 | export F_SYSLEN=5000 |
---|
1142 | #D- number of error that can be admitted on the NEC |
---|
1143 | export F_ERRCNT=0 |
---|
1144 | #D- global performance |
---|
1145 | export F_PROGINF=DETAIL |
---|
1146 | |
---|
1147 | #D- I/O performance (FORTRAN I/O only not netCDF) |
---|
1148 | export F_FILEINF=${F_FILEINF:=NO} |
---|
1149 | #D- netCDF I/O performance |
---|
1150 | export NC_FILEINF=${NC_FILEINF:=NO} |
---|
1151 | |
---|
1152 | IGCM_debug_PopStack "IGCM_sys_activ_variables" |
---|
1153 | } |
---|
1154 | |
---|
1155 | ############################################################ |
---|
1156 | # Desactivate Running Environnment Variables |
---|
1157 | |
---|
1158 | function IGCM_sys_desactiv_variables { |
---|
1159 | IGCM_debug_PushStack "IGCM_sys_desactiv_variables" |
---|
1160 | if ( $DEBUG_sys ) ; then |
---|
1161 | echo "IGCM_sys_desactiv_variables" |
---|
1162 | fi |
---|
1163 | # -------------------------------------------------------------------- |
---|
1164 | #D- MPI specifications |
---|
1165 | # -------------------------------------------------------------------- |
---|
1166 | |
---|
1167 | #D-- MPIPROGINF |
---|
1168 | export MPIPROGINF=NO |
---|
1169 | |
---|
1170 | # -------------------------------------------------------------------- |
---|
1171 | #D- Other specifications |
---|
1172 | # -------------------------------------------------------------------- |
---|
1173 | |
---|
1174 | #D- global performance |
---|
1175 | export F_PROGINF=NO |
---|
1176 | |
---|
1177 | IGCM_debug_PopStack "IGCM_sys_desactiv_variables" |
---|
1178 | } |
---|
1179 | |
---|
1180 | ############################################################ |
---|
1181 | # Build run file |
---|
1182 | |
---|
1183 | function IGCM_sys_build_run_file { |
---|
1184 | IGCM_debug_PushStack "IGCM_sys_build_run_file" $@ |
---|
1185 | if ( $DEBUG_sys ) ; then |
---|
1186 | echo "IGCM_sys_build_run_file " $@ |
---|
1187 | fi |
---|
1188 | (( NUM_PROC_ATM = BATCH_NUM_PROC_TOT - 1 )) |
---|
1189 | (( NUM_PROC_OASIS = BATCH_NUM_PROC_TOT - NUM_PROC_ATM )) |
---|
1190 | (( NUM_PROC_OCE = BATCH_NUM_PROC_TOT - NUM_PROC_ATM )) |
---|
1191 | |
---|
1192 | if [ $1 = MPI2 ]; then |
---|
1193 | cat <<EOF > run_file |
---|
1194 | -p 1 -np 1 -e ./oasis |
---|
1195 | EOF |
---|
1196 | (( NUM_PROCESS = BATCH_NUM_PROC_TOT + 1 )) |
---|
1197 | config_UserChoices_JobRunOptions='"-max_np ${NUM_PROCESS} -f"' |
---|
1198 | |
---|
1199 | elif [ $1 = MPI1 ]; then |
---|
1200 | cat <<EOF > run_file |
---|
1201 | -p $NUM_PROC_OASIS -e ./oasis |
---|
1202 | -p $NUM_PROC_ATM -e ./lmdz.x |
---|
1203 | -p $NUM_PROC_OCE -e ./opa.xx |
---|
1204 | EOF |
---|
1205 | |
---|
1206 | fi |
---|
1207 | |
---|
1208 | IGCM_debug_PopStack "IGCM_sys_build_run_file" |
---|
1209 | |
---|
1210 | } |
---|