1 | #!/bin/ksh |
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2 | |
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3 | #************************************************************** |
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4 | # Author: Sebastien Denvil, Martial Mancip |
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5 | # Contact: Martial.Mancip_ipsl.jussieu.fr |
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6 | # $Date$ |
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7 | # $Author$ |
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8 | # $Revision$ |
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9 | # IPSL (2006) |
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10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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11 | # History: |
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12 | # Modification: |
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13 | # |
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14 | #************************************************************** |
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15 | |
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16 | #========================================================= |
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17 | # The documentation of this file can be automatically generated |
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18 | # if you use the prefix #D- for comments to be extracted. |
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19 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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20 | #========================================================= |
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21 | |
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22 | #D-#================================================== |
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23 | #D-LibIGCM_sys for Platine |
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24 | #D-#================================================== |
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25 | #D- |
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26 | #D- This ksh library if a layer under some usefull |
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27 | #D-environment variables and shell commands. |
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28 | #D-All those definitions depend on host particularities. |
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29 | #D-It manages a stack mechanism and test validity of operations. |
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30 | #D-All function described bellow must be prefixed by IGCM_sys. |
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31 | |
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32 | #==================================================== |
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33 | # libIGCM_sys PARAMETERS |
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34 | #==================================================== |
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35 | |
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36 | #==================================================== |
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37 | # set DEBUG_sys to true to output calls of function |
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38 | typeset -r DEBUG_sys=${DEBUG_sys:=true} |
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39 | |
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40 | #==================================================== |
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41 | # Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get) |
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42 | typeset -r DRYRUN=${DRYRUN:=0} |
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43 | |
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44 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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45 | # ------------------------------------------------------------------------------------- |
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46 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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47 | # | | Cp/Exe param files | | Chmod | | |
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48 | # | | Qsub | | | | |
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49 | # ------------------------------------------------------------------------------------- |
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50 | # | 0 | yes | yes | yes | yes | |
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51 | # ------------------------------------------------------------------------------------- |
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52 | # | 1 | yes | yes | yes | no | |
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53 | # ------------------------------------------------------------------------------------- |
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54 | # | 2 | yes | yes | no | no | |
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55 | # ------------------------------------------------------------------------------------- |
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56 | # | 3 | yes | no | no | no | |
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57 | # ------------------------------------------------------------------------------------- |
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58 | |
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59 | #===================================================== |
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60 | # Global Variables : |
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61 | #===================================================== |
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62 | # Language : "fr" or "en" |
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63 | typeset -r MYLANG="fr" |
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64 | |
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65 | #===================================================== |
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66 | # Host and user names |
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67 | # $hostname ou hostname |
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68 | typeset HOST=${HOST:=$( hostname )} |
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69 | # $username ou whoami |
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70 | typeset LOGIN=${LOGIN:=$( whoami )} |
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71 | # $hostname of the MASTER job |
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72 | typeset MASTER=platine |
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73 | |
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74 | #D- |
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75 | #D-#================================================== |
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76 | #D-Program used in libIGCM |
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77 | #D-#================================================== |
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78 | |
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79 | # rsync with path |
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80 | typeset -r RSYNC=/usr/bin/rsync |
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81 | # RSYNC_opt args to rsync |
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82 | typeset -r RSYNC_opt="-va" |
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83 | # ie storage filesystem |
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84 | typeset -r RHOST=platine |
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85 | |
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86 | #==================================================== |
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87 | # Set environment tools (ferret, nco, cdo) |
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88 | #==================================================== |
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89 | . /home/cont003/p86ipsl/.atlas_env_platine_ksh |
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90 | |
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91 | #==================================================== |
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92 | # Specific for ocean additionnal diagnostic |
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93 | export FER_GO="$FER_GO /home/cont003/p86denv/IGCM_POST_UTIL/JNL /home/cont003/p86denv/GRAF /home/cont003/p86denv/GRAF/GO" |
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94 | export FER_PALETTE="$FER_PALETTE /home/cont003/p86denv/GRAF/PALET" |
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95 | |
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96 | #==================================================== |
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97 | # Host specific DIRECTORIES |
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98 | #==================================================== |
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99 | |
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100 | #==================================================== |
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101 | #- R_EXE (==> BIN_DIR = ${MODIPSL}/bin ) |
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102 | typeset -r R_EXE="${MODIPSL}/bin" |
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103 | |
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104 | #==================================================== |
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105 | #- SUBMIT_DIR : submission dir |
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106 | typeset SUBMIT_DIR=${SUBMIT_DIR:=${PWD}} |
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107 | |
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108 | #==================================================== |
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109 | #- ARCHIVE |
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110 | typeset -r ARCHIVE=${DMFDIR} |
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111 | |
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112 | #==================================================== |
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113 | #- libIGCM_POST |
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114 | typeset -r libIGCM_POST=${libIGCM} |
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115 | |
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116 | #==================================================== |
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117 | #- IN |
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118 | typeset -r R_IN=${R_IN:=/dmnfs/cont003/p86ipsl/IGCM} |
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119 | |
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120 | #==================================================== |
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121 | #- OUT |
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122 | typeset -r R_OUT=${ARCHIVE}/IGCM_OUT |
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123 | |
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124 | #==================================================== |
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125 | #- OUT_SCR (ONLY FOR double copy an scratch) |
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126 | typeset -r R_OUT_SCR=${SCRATCHDIR}/IGCM_OUT |
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127 | |
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128 | #==================================================== |
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129 | #- OUT_POST |
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130 | typeset -r R_OUT_POST=${SCRATCHDIR}/IGCM_OUT |
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131 | |
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132 | #==================================================== |
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133 | #- RUN_DIR_PATH : Temporary working directory (=> TMP) |
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134 | typeset RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}} |
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135 | if [ $LSB_QUEUE == post ] ; then |
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136 | typeset -r RUN_DIR_PATH=${SCRATCHDIR}/TMPDIR_IGCM/tmp$$ |
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137 | if [ ! -d ${RUN_DIR_PATH} ]; then |
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138 | \mkdir -p ${RUN_DIR_PATH} |
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139 | if [ $? -gt 0 ] ; then |
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140 | echo "Error in creation of "${RUN_DIR_PATH} |
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141 | fi |
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142 | fi |
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143 | fi |
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144 | |
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145 | #==================================================== |
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146 | #- BIG_DIR : BIG_DIR to store files waiting for rebuild |
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147 | typeset -r BIG_DIR=${BIG_DIR:=${SCRATCHDIR}/REBUILD} |
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148 | |
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149 | #==================================================== |
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150 | #- HOST_MPIRUN_COMMAND |
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151 | typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="time srun"} |
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152 | |
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153 | #==================================================== |
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154 | #- Max number of arguments passed to nco operator or demigration command |
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155 | UNIX_MAX_LIMIT=360 |
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156 | |
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157 | #D-#================================================== |
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158 | #D-function IGCM_sys_RshMaster |
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159 | #D-* Purpose: Just a fake command to wrapp |
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160 | #D- IGCM_card call in post-treatment |
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161 | #D- Ulam do not see brodie filesystem |
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162 | #D- Cesium do not see all mercure filesystem |
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163 | #D- That's why we need this hack. |
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164 | #D-* Examples: |
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165 | #D- |
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166 | function IGCM_sys_RshMaster { |
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167 | IGCM_debug_PushStack "IGCM_sys_RshMaster" $@ |
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168 | /bin/ksh <<-EOF |
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169 | export libIGCM=${libIGCM} |
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170 | export DEBUG_debug=${DEBUG_debug} |
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171 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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172 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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173 | ${@} |
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174 | EOF |
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175 | if [ $? -gt 0 ] ; then |
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176 | echo "IGCM_sys_RshMaster : erreur." |
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177 | IGCM_debug_Exit "IGCM_sys_RshMaster" |
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178 | fi |
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179 | IGCM_debug_PopStack "IGCM_sys_RshMaster" |
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180 | } |
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181 | |
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182 | #D-#================================================== |
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183 | #D-function IGCM_sys_RshArchive |
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184 | #D-* Purpose: Archive rsh command |
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185 | #D-* Examples: |
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186 | #D- |
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187 | function IGCM_sys_RshArchive { |
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188 | IGCM_debug_PushStack "IGCM_sys_RshArchive" $@ |
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189 | /bin/ksh <<-EOF |
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190 | ${@} |
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191 | EOF |
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192 | if [ $? -gt 0 ] ; then |
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193 | echo "IGCM_sys_RshArchive : erreur." |
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194 | IGCM_debug_Exit "IGCM_sys_RshArchive" |
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195 | fi |
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196 | IGCM_debug_PopStack "IGCM_sys_RshArchive" |
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197 | } |
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198 | |
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199 | #D-#================================================== |
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200 | #D-function IGCM_sys_RshPost |
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201 | #D-* Purpose: Post-process rsh command |
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202 | #D-* Examples: |
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203 | #D- |
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204 | function IGCM_sys_RshPost { |
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205 | IGCM_debug_PushStack "IGCM_sys_RshPost" $@ |
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206 | if ( $DEBUG_sys ) ; then |
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207 | echo "IGCM_sys_RshPost :" $@ |
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208 | fi |
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209 | /bin/ksh ${@} |
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210 | if [ $? -gt 0 ] ; then |
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211 | echo "IGCM_sys_RshPost : erreur." |
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212 | IGCM_debug_Exit "IGCM_sys_RshPost" |
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213 | fi |
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214 | IGCM_debug_PopStack "IGCM_sys_RshPost" |
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215 | } |
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216 | |
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217 | #D-#================================================== |
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218 | #D-function IGCM_sys_SendMail |
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219 | #D-* Purpose: Send mail when simulation is over |
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220 | #D-* Examples: |
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221 | #D- |
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222 | function IGCM_sys_SendMail { |
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223 | IGCM_debug_PushStack "IGCM_sys_SendMailPost" $@ |
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224 | if ( $DEBUG_sys ) ; then |
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225 | echo "IGCM_sys_SendMail :" $@ |
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226 | fi |
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227 | cat << END_MAIL > job_end.mail |
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228 | Dear ${LOGIN}, |
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229 | |
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230 | Simulation ${config_UserChoices_JobName} is finished on supercomputer `hostname`. |
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231 | Job started : ${DateBegin} |
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232 | Job ended : ${DateEnd} |
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233 | Ouput files are available in ${R_SAVE} |
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234 | Script files and Script Outputs are available in ${SUBMIT_DIR} |
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235 | END_MAIL |
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236 | |
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237 | if [ ! -z ${config_UserChoices_MailName} ] ; then |
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238 | mailx -s "${config_UserChoices_JobName} completed" ${config_UserChoices_MailName} < job_end.mail |
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239 | elif [ -f ~/.forward ] ; then |
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240 | mailx -s "${config_UserChoices_JobName} completed" $( cat ~/.forward ) < job_end.mail |
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241 | fi |
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242 | |
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243 | if [ $? -gt 0 ] ; then |
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244 | echo "IGCM_sys_SendMail : erreur." |
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245 | IGCM_debug_Exit "IGCM_sys_SendMail" |
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246 | fi |
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247 | IGCM_debug_PopStack "IGCM_sys_SendMail" |
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248 | } |
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249 | |
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250 | #D-#================================================== |
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251 | #D-function IGCM_sys_Mkdir |
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252 | #D-* Purpose: Master locale mkdir command |
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253 | #D-* Examples: |
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254 | #D- |
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255 | function IGCM_sys_Mkdir { |
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256 | IGCM_debug_PushStack "IGCM_sys_Mkdir" $@ |
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257 | if ( $DEBUG_sys ) ; then |
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258 | echo "IGCM_sys_Mkdir :" $@ |
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259 | fi |
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260 | if [ ! -d ${1} ]; then |
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261 | \mkdir -p $1 |
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262 | if [ $? -gt 0 ] ; then |
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263 | echo "IGCM_sys_Mkdir : erreur." |
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264 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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265 | fi |
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266 | fi |
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267 | # vérification : |
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268 | if [ ! -d ${1} ] ; then |
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269 | echo "IGCM_sys_Mkdir : erreur." |
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270 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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271 | fi |
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272 | IGCM_debug_PopStack "IGCM_sys_Mkdir" |
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273 | } |
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274 | |
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275 | #D-#================================================== |
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276 | #D-function IGCM_sys_MkdirArchive |
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277 | #D-* Purpose: Mkdir on Archive |
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278 | #D-* Examples: |
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279 | #D- |
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280 | function IGCM_sys_MkdirArchive { |
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281 | IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@ |
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282 | if ( $DEBUG_sys ) ; then |
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283 | echo "IGCM_sys_MkdirArchive :" $@ |
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284 | fi |
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285 | #- creation de repertoire sur le serveur fichier |
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286 | if [ ! -d ${1} ]; then |
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287 | \mkdir -p $1 |
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288 | if [ $? -gt 0 ] ; then |
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289 | echo "IGCM_sys_MkdirArchive : erreur." |
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290 | IGCM_debug_Exit "IGCM_sys_MkdirArchive" |
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291 | fi |
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292 | fi |
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293 | IGCM_debug_PopStack "IGCM_sys_MkdirArchive" |
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294 | } |
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295 | |
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296 | #D-#================================================== |
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297 | #D-function IGCM_sys_MkdirWork |
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298 | #D-* Purpose: Mkdir on Work |
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299 | #D-* Examples: |
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300 | #D- |
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301 | function IGCM_sys_MkdirWork { |
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302 | IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@ |
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303 | if ( $DEBUG_sys ) ; then |
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304 | echo "IGCM_sys_MkdirWork :" $@ |
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305 | fi |
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306 | #- creation de repertoire sur le serveur fichier |
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307 | if [ ! -d ${1} ]; then |
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308 | \mkdir -p $1 |
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309 | if [ $? -gt 0 ] ; then |
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310 | echo "IGCM_sys_MkdirWork : erreur." |
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311 | IGCM_debug_Exit "IGCM_sys_MkdirWork" |
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312 | fi |
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313 | fi |
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314 | IGCM_debug_PopStack "IGCM_sys_MkdirWork" |
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315 | } |
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316 | |
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317 | #D-#================================================== |
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318 | #D-function IGCM_sys_Cd |
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319 | #D-* Purpose: master cd command |
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320 | #D-* Examples: |
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321 | #D- |
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322 | function IGCM_sys_Cd { |
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323 | IGCM_debug_PushStack "IGCM_sys_Cd" $@ |
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324 | if ( $DEBUG_sys ) ; then |
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325 | echo "IGCM_sys_Cd :" $@ |
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326 | fi |
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327 | \cd $1 |
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328 | if [ $? -gt 0 ] ; then |
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329 | echo "IGCM_sys_Cd : erreur." |
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330 | IGCM_debug_Exit "IGCM_sys_Cd" |
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331 | fi |
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332 | IGCM_debug_PopStack "IGCM_sys_Cd" |
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333 | } |
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334 | |
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335 | #D-#================================================== |
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336 | #D-function IGCM_sys_Chmod |
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337 | #D-* Purpose: Chmod |
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338 | #D-* Examples: |
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339 | #D- |
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340 | function IGCM_sys_Chmod { |
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341 | IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@ |
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342 | if ( $DEBUG_sys ) ; then |
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343 | echo "IGCM_sys_Chmod :" $@ |
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344 | fi |
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345 | if [ $DRYRUN -le 1 ]; then |
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346 | \chmod $@ |
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347 | if [ $? -gt 0 ] ; then |
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348 | echo "IGCM_sys_Chmod : erreur." |
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349 | IGCM_debug_Exit "IGCM_sys_Chmod" |
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350 | fi |
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351 | else |
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352 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
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353 | fi |
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354 | IGCM_debug_PopStack "IGCM_sys_Chmod" |
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355 | } |
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356 | |
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357 | #D-#================================================== |
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358 | #D-function IGCM_sys_FileSize |
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359 | #D-* Purpose: Filesize |
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360 | #D-* Examples: |
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361 | #D- |
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362 | function IGCM_sys_FileSize { |
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363 | IGCM_debug_PushStack "IGCM_sys_FileSize" $@ |
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364 | |
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365 | typeset sizeF |
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366 | set +A sizeF -- $( ls -la ${1} ) |
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367 | if [ $? -gt 0 ] ; then |
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368 | IGCM_debug_Exit "IGCM_sys_FileSize" |
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369 | fi |
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370 | eval ${2}=${sizeF[4]} |
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371 | |
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372 | IGCM_debug_PopStack "IGCM_sys_FileSize" |
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373 | } |
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374 | |
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375 | #D-#================================================== |
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376 | #D-function IGCM_sys_TestDir |
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377 | #D-* Purpose: Test Directory that must exists |
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378 | #D-* Examples: |
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379 | #D- |
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380 | function IGCM_sys_TestDir { |
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381 | IGCM_debug_PushStack "IGCM_sys_TestDir" $@ |
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382 | if ( $DEBUG_sys ) ; then |
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383 | echo "IGCM_sys_TestDir :" $@ |
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384 | fi |
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385 | typeset ExistFlag |
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386 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
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387 | IGCM_debug_PopStack "IGCM_sys_TestDir" |
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388 | |
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389 | return ${ExistFlag} |
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390 | } |
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391 | |
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392 | #D-#================================================== |
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393 | #D-function IGCM_sys_TestDirArchive |
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394 | #D-* Purpose: Test Directory that must exists on Archive |
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395 | #D-* Examples: |
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396 | #D- |
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397 | function IGCM_sys_TestDirArchive { |
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398 | IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@ |
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399 | if ( $DEBUG_sys ) ; then |
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400 | echo "IGCM_sys_TestDirArchive :" $@ |
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401 | fi |
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402 | typeset ExistFlag |
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403 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
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404 | IGCM_debug_PopStack "IGCM_sys_TestDirArchive" |
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405 | |
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406 | return ${ExistFlag} |
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407 | } |
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408 | |
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409 | #D-#================================================== |
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410 | #D-function IGCM_sys_TestFileArchive |
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411 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
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412 | #D-* Examples: |
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413 | #D- |
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414 | function IGCM_sys_TestFileArchive { |
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415 | IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@ |
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416 | if ( $DEBUG_sys ) ; then |
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417 | echo "IGCM_sys_TestFileArchive :" $@ |
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418 | fi |
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419 | typeset ExistFlag |
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420 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
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421 | IGCM_debug_PopStack "IGCM_sys_TestFileArchive" |
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422 | |
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423 | return ${ExistFlag} |
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424 | } |
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425 | |
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426 | #D-#================================================== |
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427 | #D-function IGCM_sys_CountFileArchive |
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428 | #D-* Purpose: Count files on Archive filesystem |
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429 | #D-* Examples: |
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430 | #D- |
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431 | function IGCM_sys_CountFileArchive { |
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432 | IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@ |
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433 | ls ${@} 2>/dev/null | wc -l |
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434 | if [ $? -gt 0 ] ; then |
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435 | echo "IGCM_sys_CountFileArchive : erreur." |
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436 | fi |
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437 | IGCM_debug_PopStack "IGCM_sys_CountFileArchive" |
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438 | } |
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439 | |
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440 | #D-#================================================== |
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441 | #D-function IGCM_sys_Tree |
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442 | #D-* Purpose: Tree directories with files on ${ARCHIVE} |
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443 | #D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT} |
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444 | #D- |
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445 | function IGCM_sys_Tree { |
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446 | IGCM_debug_PushStack "IGCM_sys_Tree" $@ |
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447 | if ( $DEBUG_sys ) ; then |
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448 | echo "IGCM_sys_Tree :" $@ |
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449 | fi |
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450 | |
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451 | \tree -f $@ |
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452 | |
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453 | IGCM_debug_PopStack "IGCM_sys_Tree" |
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454 | } |
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455 | |
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456 | #D-#================================================== |
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457 | #D-function IGCM_sys_Tar |
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458 | #D-* Purpose: master un-tar command |
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459 | #D-* Examples: |
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460 | #D- |
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461 | function IGCM_sys_Tar { |
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462 | IGCM_debug_PushStack "IGCM_sys_Tar" $@ |
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463 | if ( $DEBUG_sys ) ; then |
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464 | echo "IGCM_sys_Tar :" $@ |
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465 | fi |
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466 | \tar cvf $@ |
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467 | if [ $? -gt 0 ] ; then |
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468 | echo "IGCM_sys_Tar : erreur." |
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469 | IGCM_debug_Exit "IGCM_sys_Tar" |
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470 | fi |
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471 | \tar tvf $1 |
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472 | |
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473 | IGCM_debug_PopStack "IGCM_sys_Tar" |
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474 | } |
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475 | |
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476 | #D-#================================================== |
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477 | #D-function IGCM_sys_UnTar |
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478 | #D-* Purpose: master un-tar command |
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479 | #D-* Examples: |
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480 | #D- |
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481 | function IGCM_sys_UnTar { |
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482 | IGCM_debug_PushStack "IGCM_sys_UnTar" $@ |
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483 | if ( $DEBUG_sys ) ; then |
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484 | echo "IGCM_sys_UnTar :" $@ |
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485 | fi |
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486 | \tar xvf $1 |
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487 | if [ $? -gt 0 ] ; then |
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488 | echo "IGCM_sys_UnTar : erreur." |
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489 | IGCM_debug_Exit "IGCM_sys_UnTar" |
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490 | fi |
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491 | IGCM_debug_PopStack "IGCM_sys_UnTar" |
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492 | } |
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493 | |
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494 | #D-#================================================== |
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495 | #D-function IGCM_sys_Qsub |
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496 | #D-* Purpose: Qsub new job |
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497 | #D-* Examples: |
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498 | #D- |
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499 | function IGCM_sys_Qsub { |
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500 | IGCM_debug_PushStack "IGCM_sys_Qsub" $@ |
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501 | if ( $DEBUG_sys ) ; then |
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502 | echo "IGCM_sys_Qsub :" $@ |
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503 | fi |
---|
504 | bsub -o ${Script_Output} -J ${config_UserChoices_JobName}.${CumulPeriod} < $1 |
---|
505 | if [ $? -gt 0 ] ; then |
---|
506 | echo "IGCM_sys_Qsub : erreur " $@ |
---|
507 | IGCM_debug_Exit "IGCM_sys_Qsub" |
---|
508 | fi |
---|
509 | IGCM_debug_PopStack "IGCM_sys_Qsub" |
---|
510 | } |
---|
511 | |
---|
512 | #D-#================================================== |
---|
513 | #D-function IGCM_sys_QsubPost |
---|
514 | #D-* Purpose: Qsub new job on scalaire |
---|
515 | #D-* Examples: |
---|
516 | #D- |
---|
517 | function IGCM_sys_QsubPost { |
---|
518 | IGCM_debug_PushStack "IGCM_sys_QsubPost" $@ |
---|
519 | if ( $DEBUG_sys ) ; then |
---|
520 | echo "IGCM_sys_QsubPost :" $@ |
---|
521 | fi |
---|
522 | bsub -o ${POST_DIR}/$1.${PeriodDateEnd}.out < ${libIGCM_POST}/$1.job |
---|
523 | if [ $? -gt 0 ] ; then |
---|
524 | echo "IGCM_sys_QsubPost : erreur " $@ |
---|
525 | IGCM_debug_Exit "IGCM_sys_QsubPost" |
---|
526 | fi |
---|
527 | IGCM_debug_PopStack "IGCM_sys_QsubPost" |
---|
528 | } |
---|
529 | |
---|
530 | #D-************************* |
---|
531 | #D- File transfer functions |
---|
532 | #D-************************* |
---|
533 | #D- |
---|
534 | |
---|
535 | #D-#================================================== |
---|
536 | #D-function IGCM_sys_Rsync_out |
---|
537 | #D-* Purpose: treat return val of rsync |
---|
538 | #D-* Examples: IGCM_sys_Rsync_out out_RET_rsync |
---|
539 | #D- Error values and explanations can depend on your system version. |
---|
540 | function IGCM_sys_Rsync_out { |
---|
541 | RET=$1 |
---|
542 | if [ ! $RET ] ; then |
---|
543 | echo "rsync error !" |
---|
544 | fi |
---|
545 | |
---|
546 | if [ $MYLANG = "fr" ]; then |
---|
547 | case $RET in |
---|
548 | 0) return ;; |
---|
549 | 1) echo "Erreur de rsync ; RERR_SYNTAX : " |
---|
550 | echo "Erreur de syntaxe ou d'utilisation." |
---|
551 | return;; |
---|
552 | 2) echo "Erreur de rsync ; RERR_PROTOCOL : " |
---|
553 | echo "Incompatibilité de protocole." |
---|
554 | return;; |
---|
555 | 3) echo "Erreur de rsync ; RERR_FILESELECT 3" |
---|
556 | echo "Erreurs lors de la sélection des fichiers d'entrée sortie et" |
---|
557 | echo "répertoires" |
---|
558 | return;; |
---|
559 | 4) echo "Erreur de rsync ; RERR_UNSUPPORTED" |
---|
560 | echo "Action demandée non supportée : une tentative de manipulation de" |
---|
561 | echo "fichiers 64-bits sur une plate-forme qui ne les supporte pas a" |
---|
562 | echo "été faite ; ou une option qui est supportée par le client mais" |
---|
563 | echo "pas par le serveur a été spécifiée." |
---|
564 | return;; |
---|
565 | 10) echo "Erreur de rsync ; RERR_SOCKETIO" |
---|
566 | echo "Erreur dans le socket d'entrée sortie" |
---|
567 | return;; |
---|
568 | 11) echo "Erreur de rsync ; RERR_FILEIO" |
---|
569 | echo "Erreur d'entrée sortie fichier" |
---|
570 | return;; |
---|
571 | 12) echo "Erreur de rsync ; RERR_STREAMIO" |
---|
572 | echo "Erreur dans flux de donnée du protocole rsync" |
---|
573 | return;; |
---|
574 | 13) echo "Erreur de rsync ; RERR_MESSAGEIO" |
---|
575 | echo "Erreur avec les diagnostics du programme" |
---|
576 | return;; |
---|
577 | 14) echo "Erreur de rsync ; RERR_IPC" |
---|
578 | echo "Erreur dans le code IPC" |
---|
579 | return;; |
---|
580 | 20) echo "Erreur de rsync ; RERR_SIGNAL" |
---|
581 | echo "SIGUSR1 ou SIGINT reçu" |
---|
582 | return;; |
---|
583 | 21) echo "Erreur de rsync ; RERR_WAITCHILD" |
---|
584 | echo "Une erreur retournée par waitpid()" |
---|
585 | return;; |
---|
586 | 22) echo "Erreur de rsync ; RERR_MALLOC" |
---|
587 | echo "Erreur lors de l'allocation des tampons de mémoire de coeur" |
---|
588 | return;; |
---|
589 | 23) echo "" |
---|
590 | echo "Erreur fichier inexistant" |
---|
591 | return;; |
---|
592 | 30) echo "Erreur de rsync ; RERR_TIMEOUT" |
---|
593 | echo "Temps d'attente écoulé dans l'envoi/réception de données" |
---|
594 | return;; |
---|
595 | *) echo "Erreur de rsync : code de retour de rsync inconnu :" $RET |
---|
596 | return;; |
---|
597 | esac |
---|
598 | elif [ $MYLANG = "en" ] ; then |
---|
599 | case $RET in |
---|
600 | 0) return;; |
---|
601 | 1) echo "rsync error : Syntax or usage error " |
---|
602 | return;; |
---|
603 | 2) echo "rsync error : Protocol incompatibility " |
---|
604 | return;; |
---|
605 | 3) echo "rsync error : Errors selecting input/output files, dirs" |
---|
606 | return;; |
---|
607 | 4) echo "rsync error : Requested action not supported: an attempt" |
---|
608 | echo "was made to manipulate 64-bit files on a platform that cannot support" |
---|
609 | echo "them; or an option was specified that is supported by the client and" |
---|
610 | echo "not by the server." |
---|
611 | return;; |
---|
612 | 5) echo "rsync error : Error starting client-server protocol" |
---|
613 | return;; |
---|
614 | 10) echo "rsync error : Error in socket I/O " |
---|
615 | return;; |
---|
616 | 11) echo "rsync error : Error in file I/O " |
---|
617 | return;; |
---|
618 | 12) echo "rsync error : Error in rsync protocol data stream " |
---|
619 | return;; |
---|
620 | 13) echo "rsync error : Errors with program diagnostics " |
---|
621 | return;; |
---|
622 | 14) echo "rsync error : Error in IPC code " |
---|
623 | return;; |
---|
624 | 20) echo "rsync error : Received SIGUSR1 or SIGINT " |
---|
625 | return;; |
---|
626 | 21) echo "rsync error : Some error returned by waitpid() " |
---|
627 | return;; |
---|
628 | 22) echo "rsync error : Error allocating core memory buffers " |
---|
629 | return;; |
---|
630 | 23) echo "rsync error : Partial transfer due to error" |
---|
631 | return;; |
---|
632 | 24) echo "rsync error : Partial transfer due to vanished source files" |
---|
633 | return;; |
---|
634 | 30) echo "rsync error : Timeout in data send/receive " |
---|
635 | return;; |
---|
636 | *) echo "rsync error : return code of rsync unknown :" $RET |
---|
637 | return;; |
---|
638 | esac |
---|
639 | else |
---|
640 | echo "unknown language $MYLANG." |
---|
641 | return |
---|
642 | fi |
---|
643 | } |
---|
644 | |
---|
645 | #D-#================================================== |
---|
646 | #D-function IGCM_sys_Cp |
---|
647 | #D-* Purpose: generic cp |
---|
648 | #D-* Examples: |
---|
649 | #D- |
---|
650 | function IGCM_sys_Cp { |
---|
651 | IGCM_debug_PushStack "IGCM_sys_Cp" $@ |
---|
652 | if ( $DEBUG_sys ) ; then |
---|
653 | echo "IGCM_sys_Cp :" $@ |
---|
654 | fi |
---|
655 | |
---|
656 | typeset RET |
---|
657 | |
---|
658 | echo cp $@ > out_rsync 2>&1 |
---|
659 | \cp $@ >> out_rsync 2>&1 |
---|
660 | RET=$? |
---|
661 | |
---|
662 | if [ ${RET} -gt 0 ] ; then |
---|
663 | echo "IGCM_sys_Cp : error." |
---|
664 | cat out_rsync |
---|
665 | IGCM_debug_Exit "IGCM_sys_Cp" |
---|
666 | else |
---|
667 | rm out_rsync |
---|
668 | fi |
---|
669 | IGCM_debug_PopStack "IGCM_sys_Cp" |
---|
670 | } |
---|
671 | |
---|
672 | #D-#================================================== |
---|
673 | #D-function IGCM_sys_Rm |
---|
674 | #D-* Purpose: generic rm |
---|
675 | #D-* Examples: |
---|
676 | #D- |
---|
677 | function IGCM_sys_Rm { |
---|
678 | IGCM_debug_PushStack "IGCM_sys_Rm" -- $@ |
---|
679 | if ( $DEBUG_sys ) ; then |
---|
680 | echo "IGCM_sys_Rm :" $@ |
---|
681 | fi |
---|
682 | |
---|
683 | typeset RET |
---|
684 | |
---|
685 | echo rm $@ > out_rsync 2>&1 |
---|
686 | \rm $@ >> out_rsync 2>&1 |
---|
687 | RET=$? |
---|
688 | |
---|
689 | if [ ${RET} -gt 0 ] ; then |
---|
690 | echo "IGCM_sys_Rm : error." |
---|
691 | cat out_rsync |
---|
692 | IGCM_debug_Exit "IGCM_sys_Rm" |
---|
693 | else |
---|
694 | rm out_rsync |
---|
695 | fi |
---|
696 | IGCM_debug_PopStack "IGCM_sys_Rm" |
---|
697 | } |
---|
698 | |
---|
699 | #D-#================================================== |
---|
700 | #D-function IGCM_sys_RmRunDir |
---|
701 | #D-* Purpose: rm tmpdir (dummy function most of the time batch |
---|
702 | #D- scheduler will do the job) |
---|
703 | #D-* Examples: |
---|
704 | #D- |
---|
705 | function IGCM_sys_RmRunDir { |
---|
706 | IGCM_debug_PushStack "IGCM_sys_RmRunDir" -- $@ |
---|
707 | if ( $DEBUG_sys ) ; then |
---|
708 | echo "IGCM_sys_RmRunDir :" $@ |
---|
709 | echo "Dummy call, let the scheduler do that." |
---|
710 | fi |
---|
711 | IGCM_debug_PopStack "IGCM_sys_RmRunDir" |
---|
712 | } |
---|
713 | |
---|
714 | #D-#================================================== |
---|
715 | #D-function IGCM_sys_Mv |
---|
716 | #D-* Purpose: generic move |
---|
717 | #D-* Examples: |
---|
718 | #D- |
---|
719 | function IGCM_sys_Mv { |
---|
720 | IGCM_debug_PushStack "IGCM_sys_Mv" $@ |
---|
721 | if ( $DEBUG_sys ) ; then |
---|
722 | echo "IGCM_sys_Mv :" $@ |
---|
723 | fi |
---|
724 | |
---|
725 | if [ $DRYRUN = 0 ]; then |
---|
726 | |
---|
727 | typeset RET |
---|
728 | |
---|
729 | echo mv $@ > out_rsync 2>&1 |
---|
730 | \mv $@ >> out_rsync 2>&1 |
---|
731 | RET=$? |
---|
732 | |
---|
733 | if [ ${RET} -gt 0 ] ; then |
---|
734 | echo "IGCM_sys_Mv : error in mv." |
---|
735 | cat out_rsync |
---|
736 | IGCM_debug_Exit "IGCM_sys_Mv" |
---|
737 | else |
---|
738 | rm out_rsync |
---|
739 | fi |
---|
740 | else |
---|
741 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
742 | fi |
---|
743 | |
---|
744 | IGCM_debug_PopStack "IGCM_sys_Mv" |
---|
745 | } |
---|
746 | |
---|
747 | #D-#================================================== |
---|
748 | #D-function IGCM_sys_Put_Dir |
---|
749 | #D-* Purpose: Copy a complete directory on $(ARCHIVE) |
---|
750 | #D-* Examples: |
---|
751 | #D- |
---|
752 | function IGCM_sys_Put_Dir { |
---|
753 | IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@ |
---|
754 | if ( $DEBUG_sys ) ; then |
---|
755 | echo "IGCM_sys_Put_Dir :" $@ |
---|
756 | fi |
---|
757 | if [ $DRYRUN = 0 ]; then |
---|
758 | if [ ! -d ${1} ] ; then |
---|
759 | echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ." |
---|
760 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
761 | return |
---|
762 | fi |
---|
763 | |
---|
764 | typeset RET |
---|
765 | |
---|
766 | # Only if we use rsync |
---|
767 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
768 | # |
---|
769 | #USUAL WAY |
---|
770 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
771 | RET=$? |
---|
772 | |
---|
773 | if [ ${RET} -gt 0 ] ; then |
---|
774 | echo "IGCM_sys_Put_Dir : error." |
---|
775 | cat out_rsync |
---|
776 | IGCM_debug_Exit "IGCM_sys_Put_Dir" |
---|
777 | else |
---|
778 | rm out_rsync |
---|
779 | fi |
---|
780 | else |
---|
781 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
782 | fi |
---|
783 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
784 | } |
---|
785 | |
---|
786 | #D-#================================================== |
---|
787 | #D-function IGCM_sys_Get_Dir |
---|
788 | #D-* Purpose: Copy a complete directory from $(ARCHIVE) |
---|
789 | #D-* Examples: |
---|
790 | #D- |
---|
791 | function IGCM_sys_Get_Dir { |
---|
792 | IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@ |
---|
793 | if ( $DEBUG_sys ) ; then |
---|
794 | echo "IGCM_sys_Get_Dir :" $@ |
---|
795 | fi |
---|
796 | if [ $DRYRUN = 0 ]; then |
---|
797 | # if [ ! -d ${1} ] ; then |
---|
798 | # echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ." |
---|
799 | # IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
800 | # return |
---|
801 | # fi |
---|
802 | |
---|
803 | typeset RET |
---|
804 | |
---|
805 | # Only if we use rsync |
---|
806 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
807 | # |
---|
808 | #USUAL WAY |
---|
809 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
810 | RET=$? |
---|
811 | |
---|
812 | if [ ${RET} -gt 0 ] ; then |
---|
813 | echo "IGCM_sys_Get_Dir : error." |
---|
814 | cat out_rsync |
---|
815 | IGCM_debug_Exit "IGCM_sys_Get_Dir" |
---|
816 | else |
---|
817 | rm out_rsync |
---|
818 | fi |
---|
819 | else |
---|
820 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
821 | fi |
---|
822 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
823 | } |
---|
824 | |
---|
825 | #D-#================================================== |
---|
826 | #D-function IGCM_sys_Get_Master |
---|
827 | #D-* Purpose: Copy a complete directory from MASTER filesystem |
---|
828 | #D-* Examples: |
---|
829 | #D- |
---|
830 | function IGCM_sys_Get_Master { |
---|
831 | IGCM_debug_PushStack "IGCM_sys_Get_Master" $@ |
---|
832 | if ( $DEBUG_sys ) ; then |
---|
833 | echo "IGCM_sys_Get_Master :" $@ |
---|
834 | fi |
---|
835 | if [ $DRYRUN = 0 ]; then |
---|
836 | if [ ! -d ${1} ] ; then |
---|
837 | echo "WARNING : IGCM_sys_Get_Master ${1} DOES NOT EXIST ." |
---|
838 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
839 | return |
---|
840 | fi |
---|
841 | |
---|
842 | typeset RET |
---|
843 | sleep 60 |
---|
844 | |
---|
845 | #USUAL WAY |
---|
846 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
847 | RET=$? |
---|
848 | |
---|
849 | if [ ${RET} -gt 0 ] ; then |
---|
850 | echo "IGCM_sys_Get_Master : error." |
---|
851 | cat out_rsync |
---|
852 | IGCM_debug_Exit "IGCM_sys_Get_Master" |
---|
853 | fi |
---|
854 | else |
---|
855 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
856 | fi |
---|
857 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
858 | } |
---|
859 | |
---|
860 | #D-#================================================== |
---|
861 | #D-function IGCM_sys_Put_Rest |
---|
862 | #D-* Purpose: Put computied restarts on $(ARCHIVE). |
---|
863 | #D- File and target directory must exist. |
---|
864 | #D-* Examples: |
---|
865 | #D- |
---|
866 | function IGCM_sys_Put_Rest { |
---|
867 | IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@ |
---|
868 | if ( $DEBUG_sys ) ; then |
---|
869 | echo "IGCM_sys_Put_Rest :" $@ |
---|
870 | fi |
---|
871 | if [ $DRYRUN = 0 ]; then |
---|
872 | if [ ! -f ${1} ] ; then |
---|
873 | echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ." |
---|
874 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
875 | fi |
---|
876 | |
---|
877 | typeset RET |
---|
878 | # |
---|
879 | if [ X${JobType} = XRUN ] ; then |
---|
880 | IGCM_sys_Chmod 444 ${1} |
---|
881 | fi |
---|
882 | # |
---|
883 | IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
884 | # |
---|
885 | # USUAL WAY |
---|
886 | putfer $1 $2 > out_rsync 2>&1 |
---|
887 | RET=$? |
---|
888 | |
---|
889 | # #RSYNC WITH NETWORK RSH CALL |
---|
890 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1 |
---|
891 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1 |
---|
892 | |
---|
893 | # #RSYNC WITH NFS USE |
---|
894 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
895 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
896 | |
---|
897 | # RET=$? |
---|
898 | # IGCM_sys_Rsync_out $RET |
---|
899 | |
---|
900 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
901 | # (( RET=RET+$? )) |
---|
902 | |
---|
903 | if [ ${RET} -gt 0 ] ; then |
---|
904 | echo "IGCM_sys_Put_Rest : error." |
---|
905 | cat out_rsync |
---|
906 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
907 | else |
---|
908 | rm out_rsync |
---|
909 | fi |
---|
910 | else |
---|
911 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
912 | fi |
---|
913 | IGCM_debug_PopStack "IGCM_sys_Put_Rest" |
---|
914 | } |
---|
915 | |
---|
916 | #D-#================================================== |
---|
917 | #D-function IGCM_sys_Put_Out |
---|
918 | #D-* Purpose: Copy a file on $(ARCHIVE) after have chmod it in readonly |
---|
919 | #D-* Examples: |
---|
920 | #D- |
---|
921 | function IGCM_sys_Put_Out { |
---|
922 | IGCM_debug_PushStack "IGCM_sys_Put_Out" $@ |
---|
923 | if ( $DEBUG_sys ) ; then |
---|
924 | echo "IGCM_sys_Put_Out :" $@ |
---|
925 | fi |
---|
926 | if [ $DRYRUN = 0 ]; then |
---|
927 | if [ ! -f ${1} ] ; then |
---|
928 | echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ." |
---|
929 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
930 | return 1 |
---|
931 | fi |
---|
932 | # |
---|
933 | IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
934 | # |
---|
935 | typeset RET |
---|
936 | # |
---|
937 | if [ X${JobType} = XRUN ] ; then |
---|
938 | if [ X${3} = X ] ; then |
---|
939 | IGCM_sys_Chmod 444 ${1} |
---|
940 | fi |
---|
941 | fi |
---|
942 | # |
---|
943 | # USUAL WAY |
---|
944 | putfer $1 $2 > out_rsync 2>&1 |
---|
945 | RET=$? |
---|
946 | |
---|
947 | # #RSYNC WITH NETWORK RSH CALL |
---|
948 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1 |
---|
949 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1 |
---|
950 | |
---|
951 | # #RSYNC WITH NFS USE |
---|
952 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
953 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
954 | |
---|
955 | # RET=$? |
---|
956 | # IGCM_sys_Rsync_out $RET |
---|
957 | |
---|
958 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
959 | # (( RET=RET+$? )) |
---|
960 | |
---|
961 | if [ ${RET} -gt 0 ] ; then |
---|
962 | echo "IGCM_sys_Put_Out : error." |
---|
963 | cat out_rsync |
---|
964 | IGCM_debug_Exit "IGCM_sys_Put_Out" |
---|
965 | else |
---|
966 | rm out_rsync |
---|
967 | fi |
---|
968 | else |
---|
969 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
970 | fi |
---|
971 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
972 | return 0 |
---|
973 | } |
---|
974 | |
---|
975 | #D-#================================================== |
---|
976 | #D-function IGCM_sys_Get |
---|
977 | #D-* Purpose: Get a file from ${ARCHIVE} |
---|
978 | #D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX |
---|
979 | #D- IGCM_sys_Get /l Array_contain_myfiles /destpath/ |
---|
980 | function IGCM_sys_Get { |
---|
981 | IGCM_debug_PushStack "IGCM_sys_Get" $@ |
---|
982 | |
---|
983 | typeset DEST RET dm_liste ifile target file_work |
---|
984 | |
---|
985 | if ( $DEBUG_sys ) ; then |
---|
986 | echo "IGCM_sys_Get :" $@ |
---|
987 | fi |
---|
988 | if [ $DRYRUN -le 2 ]; then |
---|
989 | if [ X${1} = X'/l' ] ; then |
---|
990 | # test if the first file is present in the old computation : |
---|
991 | eval set +A dm_liste \${${2}} |
---|
992 | else |
---|
993 | eval set +A dm_liste ${1} |
---|
994 | fi |
---|
995 | eval DEST=\${${#}} |
---|
996 | |
---|
997 | #===================================================== |
---|
998 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
999 | #===================================================== |
---|
1000 | |
---|
1001 | # Is it an R_OUT file (not R_IN) ? |
---|
1002 | #echo ${dm_liste[0]} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
1003 | #if [ $? -eq 0 ] ; then |
---|
1004 | # # Yes ? then we try to get it in SCRATCHDIR |
---|
1005 | # set +A file_work $( echo ${dm_liste[*]} | sed -e "s|${R_OUT}|${R_OUT_SCR}|g" ) |
---|
1006 | # if [ -f ${file_work[0]} ] ; then |
---|
1007 | # IGCM_sys_Cp ${file_work[*]} ${DEST} |
---|
1008 | # IGCM_debug_PopStack "IGCM_sys_Get" |
---|
1009 | # return |
---|
1010 | # fi |
---|
1011 | #fi |
---|
1012 | |
---|
1013 | # test if the (first) file is present in the old computation : |
---|
1014 | IGCM_sys_TestFileArchive ${dm_liste[0]} |
---|
1015 | RET=$? |
---|
1016 | if [ ${RET} -gt 0 ] ; then |
---|
1017 | echo "IGCM_sys_Get, ERROR : regular file ${dm_liste[0]} DOES NOT EXIST ." |
---|
1018 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
1019 | #IGCM_debug_PopStack "IGCM_sys_Get" |
---|
1020 | #return |
---|
1021 | fi |
---|
1022 | |
---|
1023 | # dmget ${dm_liste[*]} > out_rsync 2>&1 |
---|
1024 | # RET=$? |
---|
1025 | # if [ ${RET} -gt 0 ] ; then |
---|
1026 | # echo "IGCM_sys_Get : demigration error." |
---|
1027 | # cat out_rsync |
---|
1028 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
1029 | # IGCM_debug_PopStack "IGCM_sys_Get" |
---|
1030 | # return |
---|
1031 | # fi |
---|
1032 | |
---|
1033 | #USUAL WAY |
---|
1034 | (( RET=0 )) |
---|
1035 | if [ X${1} = X'/l' ] ; then |
---|
1036 | (( RET=0 )) |
---|
1037 | for target in ${dm_liste[*]} ; do |
---|
1038 | local_file=$( basename ${target} ) |
---|
1039 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
1040 | (( RET = RET + $? )) |
---|
1041 | done |
---|
1042 | else |
---|
1043 | \cp ${dm_liste} ${DEST} >> out_rsync 2>&1 |
---|
1044 | RET=$? |
---|
1045 | fi |
---|
1046 | |
---|
1047 | # #RSYNC WITH NETWORK RSH CALL |
---|
1048 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
1049 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
1050 | |
---|
1051 | # #RSYNC WITH NFS USE |
---|
1052 | # echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
1053 | # ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
1054 | |
---|
1055 | # RET=$? |
---|
1056 | # IGCM_sys_Rsync_out $RET |
---|
1057 | |
---|
1058 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
1059 | # (( RET=RET+$? )) |
---|
1060 | |
---|
1061 | if [ ${RET} -gt 0 ] ; then |
---|
1062 | echo "IGCM_sys_Get : copy error." |
---|
1063 | cat out_rsync |
---|
1064 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
1065 | else |
---|
1066 | rm out_rsync |
---|
1067 | fi |
---|
1068 | else |
---|
1069 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
1070 | fi |
---|
1071 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
1072 | } |
---|
1073 | |
---|
1074 | #D-#================================================== |
---|
1075 | #D-function IGCM_sys_Dods_Rm |
---|
1076 | #D-* Purpose: DO NOTHING ! Put $(ARCHIVE) files on DODS internet protocole. |
---|
1077 | #D-* Examples: |
---|
1078 | #D- |
---|
1079 | function IGCM_sys_Dods_Rm { |
---|
1080 | if ( $DEBUG_sys ) ; then |
---|
1081 | echo "IGCM_sys_Dods_Rm :" $@ |
---|
1082 | fi |
---|
1083 | typeset RET |
---|
1084 | RET=0 |
---|
1085 | if [ $DRYRUN = 0 ]; then |
---|
1086 | if [ ! -d /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} ] ; then |
---|
1087 | echo "WARNING : IGCM_sys_Dods_Rm /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} DOES NOT EXIST ." |
---|
1088 | echo "Nothing has been done." |
---|
1089 | return |
---|
1090 | fi |
---|
1091 | dods_rm public/${LOGIN}/${R_DODS}/${1} > out_dods_rm 2>&1 |
---|
1092 | RET=$? |
---|
1093 | |
---|
1094 | if [ ${RET} -gt 0 ] ; then |
---|
1095 | echo "IGCM_sys_Put_Dods : error." |
---|
1096 | cat out_dods_rm |
---|
1097 | IGCM_debug_Exit "IGCM_sys_Dods_Rm" |
---|
1098 | else |
---|
1099 | rm out_dods_rm |
---|
1100 | fi |
---|
1101 | else |
---|
1102 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
1103 | fi |
---|
1104 | return $RET |
---|
1105 | } |
---|
1106 | |
---|
1107 | |
---|
1108 | #D-#================================================== |
---|
1109 | #D-function IGCM_sys_Dods_Cp |
---|
1110 | #D-* Purpose: Copy $(ARCHIVE) files on DODS internet protocole. |
---|
1111 | #D-* Examples: |
---|
1112 | #D- |
---|
1113 | function IGCM_sys_Dods_Cp { |
---|
1114 | if ( $DEBUG_sys ) ; then |
---|
1115 | echo "IGCM_sys_Dods_Cp :" $@ |
---|
1116 | fi |
---|
1117 | typeset RET |
---|
1118 | RET=0 |
---|
1119 | if [ $DRYRUN = 0 ]; then |
---|
1120 | if [ ! -d ${R_SAVE}/${1} ] ; then |
---|
1121 | echo "WARNING : IGCM_sys_Dods_Cp ${R_SAVE}/${1} DOES NOT EXIST ." |
---|
1122 | echo "Nothing has been done." |
---|
1123 | return |
---|
1124 | fi |
---|
1125 | # |
---|
1126 | dods_cp ${1} public/${LOGIN}/${R_DODS} > out_dods_cp 2>&1 |
---|
1127 | RET=$? |
---|
1128 | |
---|
1129 | if [ ${RET} -gt 0 ] ; then |
---|
1130 | echo "IGCM_sys_Dods_Cp : error." |
---|
1131 | cat out_dods_cp |
---|
1132 | IGCM_debug_Exit "IGCM_sys_Dods_Cp" |
---|
1133 | else |
---|
1134 | rm out_dods_cp |
---|
1135 | fi |
---|
1136 | else |
---|
1137 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
1138 | fi |
---|
1139 | return $RET |
---|
1140 | } |
---|
1141 | |
---|
1142 | #D-#================================================== |
---|
1143 | #D-function IGCM_sys_Put_Dods |
---|
1144 | #D-* Purpose: Put $(ARCHIVE) files on DODS internet protocole. |
---|
1145 | #D-* Examples: |
---|
1146 | #D- |
---|
1147 | function IGCM_sys_Put_Dods { |
---|
1148 | IGCM_debug_PushStack "IGCM_sys_Put_Dods" $@ |
---|
1149 | if ( $DEBUG_sys ) ; then |
---|
1150 | echo "IGCM_sys_Put_Dods :" $@ |
---|
1151 | fi |
---|
1152 | if [ $DRYRUN = 0 ]; then |
---|
1153 | if [ ! -d ${R_SAVE}/${1} ] ; then |
---|
1154 | echo "WARNING : IGCM_sys_Put_Dods ${R_SAVE}/${1} DOES NOT EXIST ." |
---|
1155 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
1156 | return |
---|
1157 | fi |
---|
1158 | |
---|
1159 | typeset RET |
---|
1160 | # |
---|
1161 | cd ${R_SAVE} |
---|
1162 | IGCM_sys_Dods_Rm ${1} |
---|
1163 | IGCM_sys_Dods_Cp ${1} |
---|
1164 | RET=0 |
---|
1165 | |
---|
1166 | if [ ${RET} -gt 0 ] ; then |
---|
1167 | echo "IGCM_sys_Put_Dods : error." |
---|
1168 | IGCM_debug_Exit "IGCM_sys_Put_Dods" |
---|
1169 | fi |
---|
1170 | else |
---|
1171 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
1172 | fi |
---|
1173 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
1174 | } |
---|
1175 | |
---|
1176 | ############################################################## A FINIR !! |
---|
1177 | |
---|
1178 | #D-#================================================== |
---|
1179 | #D-function IGCM_sys_GetDate_FichWork |
---|
1180 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK |
---|
1181 | #D-* Examples: |
---|
1182 | #D- |
---|
1183 | function IGCM_sys_GetDate_FichWork { |
---|
1184 | IGCM_debug_PushStack "IGCM_sys_FichWork" $@ |
---|
1185 | if ( $DEBUG_sys ) ; then |
---|
1186 | echo "IGCM_sys_GetDate_FichWork :" $@ |
---|
1187 | fi |
---|
1188 | # donne la date filesys d'un fichier sur la machine work |
---|
1189 | IGCM_debug_PopStack "IGCM_sys_FichWork" |
---|
1190 | } |
---|
1191 | |
---|
1192 | #D-#================================================== |
---|
1193 | #D-function IGCM_sys_GetDate_FichArchive |
---|
1194 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE |
---|
1195 | #D-* Examples: |
---|
1196 | #D- |
---|
1197 | function IGCM_sys_GetDate_FichArchive { |
---|
1198 | IGCM_debug_PushStack "IGCM_sys_FichArchive" $@ |
---|
1199 | if ( $DEBUG_sys ) ; then |
---|
1200 | echo "IGCM_sys_GetDate_FichArchive :" $@ |
---|
1201 | fi |
---|
1202 | IGCM_debug_PopStack "IGCM_sys_FichArchive" |
---|
1203 | } |
---|
1204 | |
---|
1205 | ############################################################## |
---|
1206 | # REBUILD OPERATOR |
---|
1207 | |
---|
1208 | function IGCM_sys_rebuild { |
---|
1209 | IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@ |
---|
1210 | if ( $DEBUG_sys ) ; then |
---|
1211 | echo "IGCM_sys_rebuild :" $@ |
---|
1212 | fi |
---|
1213 | /home/cont003/p86ipsl/IA64/bin/rebuild -f -o $@ |
---|
1214 | if [ $? -gt 0 ] ; then |
---|
1215 | echo "IGCM_sys_rebuild : erreur ${@}." |
---|
1216 | IGCM_debug_Exit "rebuild" |
---|
1217 | fi |
---|
1218 | |
---|
1219 | IGCM_debug_PopStack "IGCM_sys_rebuild" |
---|
1220 | } |
---|
1221 | |
---|
1222 | ############################################################## |
---|
1223 | # NCO OPERATOR |
---|
1224 | |
---|
1225 | function IGCM_sys_ncap { |
---|
1226 | IGCM_debug_PushStack "IGCM_sys_ncap" -- $@ |
---|
1227 | if ( $DEBUG_sys ) ; then |
---|
1228 | echo "IGCM_sys_ncap :" $@ |
---|
1229 | fi |
---|
1230 | /applications/nco/bin/ncap $@ |
---|
1231 | if [ $? -gt 0 ] ; then |
---|
1232 | echo "IGCM_sys_ncap : erreur ${@}." |
---|
1233 | # IGCM_debug_Exit "ncap" |
---|
1234 | fi |
---|
1235 | |
---|
1236 | IGCM_debug_PopStack "IGCM_sys_ncap" |
---|
1237 | } |
---|
1238 | |
---|
1239 | ncatted=/applications/nco/bin/ncatted |
---|
1240 | # Problem with ksh and string passed in this function to ncatted ! |
---|
1241 | # function IGCM_sys_ncatted { |
---|
1242 | # IGCM_debug_PushStack "IGCM_sys_ncatted" -- $@ |
---|
1243 | # if ( $DEBUG_sys ) ; then |
---|
1244 | # echo "IGCM_sys_ncatted :" $@ |
---|
1245 | # fi |
---|
1246 | # /usr/local/bin/ncatted $@ |
---|
1247 | # if [ $? -gt 0 ] ; then |
---|
1248 | # echo "IGCM_sys_ncatted : erreur ${@}." |
---|
1249 | # IGCM_debug_Exit "ncatted" |
---|
1250 | # fi |
---|
1251 | |
---|
1252 | # IGCM_debug_PopStack "IGCM_sys_ncatted" |
---|
1253 | # } |
---|
1254 | |
---|
1255 | function IGCM_sys_ncbo { |
---|
1256 | IGCM_debug_PushStack "IGCM_sys_ncbo" -- $@ |
---|
1257 | if ( $DEBUG_sys ) ; then |
---|
1258 | echo "IGCM_sys_ncbo :" $@ |
---|
1259 | fi |
---|
1260 | /applications/nco/bin/ncbo $@ |
---|
1261 | if [ $? -gt 0 ] ; then |
---|
1262 | echo "IGCM_sys_ncbo : erreur ${@}." |
---|
1263 | # IGCM_debug_Exit "ncbo" |
---|
1264 | fi |
---|
1265 | |
---|
1266 | IGCM_debug_PopStack "IGCM_sys_ncbo" |
---|
1267 | } |
---|
1268 | |
---|
1269 | function IGCM_sys_ncdiff { |
---|
1270 | IGCM_debug_PushStack "IGCM_sys_ncdiff" -- $@ |
---|
1271 | if ( $DEBUG_sys ) ; then |
---|
1272 | echo "IGCM_sys_ncdiff :" $@ |
---|
1273 | fi |
---|
1274 | /applications/nco/bin/ncdiff $@ |
---|
1275 | if [ $? -gt 0 ] ; then |
---|
1276 | echo "IGCM_sys_ncdiff : erreur ${@}." |
---|
1277 | # IGCM_debug_Exit "ncdiff" |
---|
1278 | fi |
---|
1279 | |
---|
1280 | IGCM_debug_PopStack "IGCM_sys_ncdiff" |
---|
1281 | } |
---|
1282 | |
---|
1283 | function IGCM_sys_ncea { |
---|
1284 | IGCM_debug_PushStack "IGCM_sys_ncea" -- $@ |
---|
1285 | if ( $DEBUG_sys ) ; then |
---|
1286 | echo "IGCM_sys_ncea :" $@ |
---|
1287 | fi |
---|
1288 | /applications/nco/bin/ncea $@ |
---|
1289 | if [ $? -gt 0 ] ; then |
---|
1290 | echo "IGCM_sys_ncea : erreur ${@}." |
---|
1291 | # IGCM_debug_Exit "ncea" |
---|
1292 | fi |
---|
1293 | |
---|
1294 | IGCM_debug_PopStack "IGCM_sys_ncea" |
---|
1295 | } |
---|
1296 | |
---|
1297 | function IGCM_sys_ncecat { |
---|
1298 | IGCM_debug_PushStack "IGCM_sys_ncecat" -- $@ |
---|
1299 | if ( $DEBUG_sys ) ; then |
---|
1300 | echo "IGCM_sys_ncecat :" $@ |
---|
1301 | fi |
---|
1302 | /applications/nco/bin/ncecat $@ |
---|
1303 | if [ $? -gt 0 ] ; then |
---|
1304 | echo "IGCM_sys_ncecat : erreur ${@}." |
---|
1305 | # IGCM_debug_Exit "ncecat" |
---|
1306 | fi |
---|
1307 | |
---|
1308 | IGCM_debug_PopStack "IGCM_sys_ncecat" |
---|
1309 | } |
---|
1310 | |
---|
1311 | function IGCM_sys_ncflint { |
---|
1312 | IGCM_debug_PushStack "IGCM_sys_ncflint" -- $@ |
---|
1313 | if ( $DEBUG_sys ) ; then |
---|
1314 | echo "IGCM_sys_ncflint :" $@ |
---|
1315 | fi |
---|
1316 | /usr/local/bin/ncflint $@ |
---|
1317 | if [ $? -gt 0 ] ; then |
---|
1318 | echo "IGCM_sys_ncflint : erreur ${@}." |
---|
1319 | # IGCM_debug_Exit "ncflint" |
---|
1320 | fi |
---|
1321 | |
---|
1322 | IGCM_debug_PopStack "IGCM_sys_ncflint" |
---|
1323 | } |
---|
1324 | |
---|
1325 | function IGCM_sys_ncks { |
---|
1326 | IGCM_debug_PushStack "IGCM_sys_ncks" -- $@ |
---|
1327 | if ( $DEBUG_sys ) ; then |
---|
1328 | echo "IGCM_sys_ncks :" $@ |
---|
1329 | fi |
---|
1330 | /applications/nco/bin/ncks $@ |
---|
1331 | if [ $? -gt 0 ] ; then |
---|
1332 | echo "IGCM_sys_ncks : erreur ${@}." |
---|
1333 | # IGCM_debug_Exit "ncks" |
---|
1334 | fi |
---|
1335 | |
---|
1336 | IGCM_debug_PopStack "IGCM_sys_ncks" |
---|
1337 | } |
---|
1338 | |
---|
1339 | function IGCM_sys_ncpdq { |
---|
1340 | IGCM_debug_PushStack "IGCM_sys_ncpdq" -- $@ |
---|
1341 | if ( $DEBUG_sys ) ; then |
---|
1342 | echo "IGCM_sys_ncpdq :" $@ |
---|
1343 | fi |
---|
1344 | /applications/nco/bin/ncpdq $@ |
---|
1345 | if [ $? -gt 0 ] ; then |
---|
1346 | echo "IGCM_sys_ncpdq : erreur ${@}." |
---|
1347 | # IGCM_debug_Exit "ncpdq" |
---|
1348 | fi |
---|
1349 | |
---|
1350 | IGCM_debug_PopStack "IGCM_sys_ncpdq" |
---|
1351 | } |
---|
1352 | |
---|
1353 | function IGCM_sys_ncra { |
---|
1354 | IGCM_debug_PushStack "IGCM_sys_ncra" -- $@ |
---|
1355 | if ( $DEBUG_sys ) ; then |
---|
1356 | echo "IGCM_sys_ncra :" $@ |
---|
1357 | fi |
---|
1358 | /applications/nco/bin/ncra $@ |
---|
1359 | if [ $? -gt 0 ] ; then |
---|
1360 | echo "IGCM_sys_ncra : erreur ${@}." |
---|
1361 | # IGCM_debug_Exit "ncra" |
---|
1362 | fi |
---|
1363 | |
---|
1364 | IGCM_debug_PopStack "IGCM_sys_ncra" |
---|
1365 | } |
---|
1366 | |
---|
1367 | function IGCM_sys_ncrcat { |
---|
1368 | IGCM_debug_PushStack "IGCM_sys_ncrcat" -- $@ |
---|
1369 | if ( $DEBUG_sys ) ; then |
---|
1370 | echo "IGCM_sys_ncrcat :" $@ |
---|
1371 | fi |
---|
1372 | /applications/nco/bin/ncrcat $@ |
---|
1373 | if [ $? -gt 0 ] ; then |
---|
1374 | echo "IGCM_sys_ncrcat : erreur ${@}." |
---|
1375 | # IGCM_debug_Exit "ncrcat" |
---|
1376 | fi |
---|
1377 | |
---|
1378 | IGCM_debug_PopStack "IGCM_sys_ncrcat" |
---|
1379 | } |
---|
1380 | |
---|
1381 | function IGCM_sys_ncrename { |
---|
1382 | IGCM_debug_PushStack "IGCM_sys_ncrename" -- $@ |
---|
1383 | if ( $DEBUG_sys ) ; then |
---|
1384 | echo "IGCM_sys_ncrename :" $@ |
---|
1385 | fi |
---|
1386 | /applications/nco/bin/ncrename $@ |
---|
1387 | if [ $? -gt 0 ] ; then |
---|
1388 | echo "IGCM_sys_ncrename : erreur ${@}." |
---|
1389 | # IGCM_debug_Exit "ncrename" |
---|
1390 | fi |
---|
1391 | |
---|
1392 | IGCM_debug_PopStack "IGCM_sys_ncrename" |
---|
1393 | } |
---|
1394 | |
---|
1395 | function IGCM_sys_ncwa { |
---|
1396 | IGCM_debug_PushStack "IGCM_sys_ncwa" -- $@ |
---|
1397 | if ( $DEBUG_sys ) ; then |
---|
1398 | echo "IGCM_sys_ncwa :" $@ |
---|
1399 | fi |
---|
1400 | /applications/nco/bin/ncwa $@ |
---|
1401 | if [ $? -gt 0 ] ; then |
---|
1402 | echo "IGCM_sys_ncwa : erreur ${@}." |
---|
1403 | # IGCM_debug_Exit "ncwa" |
---|
1404 | fi |
---|
1405 | |
---|
1406 | IGCM_debug_PopStack "IGCM_sys_ncwa" |
---|
1407 | } |
---|
1408 | |
---|
1409 | ############################################################## |
---|
1410 | # CDO OPERATOR |
---|
1411 | |
---|
1412 | function IGCM_sys_cdo { |
---|
1413 | IGCM_debug_PushStack "IGCM_sys_cdo" -- $@ |
---|
1414 | |
---|
1415 | \cdo $@ |
---|
1416 | if [ $? -gt 0 ] ; then |
---|
1417 | echo "IGCM_sys_cdo : erreur ${@}." |
---|
1418 | # IGCM_debug_Exit "cdo" |
---|
1419 | fi |
---|
1420 | |
---|
1421 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
1422 | } |
---|
1423 | |
---|
1424 | ############################################################ |
---|
1425 | # Activate Running Environnment Variables |
---|
1426 | |
---|
1427 | function IGCM_sys_activ_variables { |
---|
1428 | IGCM_debug_PushStack "IGCM_sys_activ_variables" |
---|
1429 | if ( $DEBUG_sys ) ; then |
---|
1430 | echo "IGCM_sys_activ_variables" |
---|
1431 | fi |
---|
1432 | ulimit -s 2097152 |
---|
1433 | IGCM_debug_PopStack "IGCM_sys_activ_variables" |
---|
1434 | } |
---|
1435 | |
---|
1436 | ############################################################ |
---|
1437 | # Desactivate Running Environnment Variables |
---|
1438 | |
---|
1439 | function IGCM_sys_desactiv_variables { |
---|
1440 | IGCM_debug_PushStack "IGCM_sys_desactiv_variables" |
---|
1441 | if ( $DEBUG_sys ) ; then |
---|
1442 | echo "IGCM_sys_desactiv_variables" |
---|
1443 | fi |
---|
1444 | IGCM_debug_PopStack "IGCM_sys_desactiv_variables" |
---|
1445 | } |
---|
1446 | |
---|
1447 | ############################################################ |
---|
1448 | # Build run file |
---|
1449 | |
---|
1450 | function IGCM_sys_build_run_file { |
---|
1451 | IGCM_debug_PushStack "IGCM_sys_build_run_file" $@ |
---|
1452 | if ( $DEBUG_sys ) ; then |
---|
1453 | echo "IGCM_sys_build_run_file " $@ |
---|
1454 | fi |
---|
1455 | NUM_PROC_OCE=1 |
---|
1456 | (( NUM_PROC_ATM = $BATCH_NUM_PROC_TOT - NUM_PROC_OCE - 1)) |
---|
1457 | (( nb_tot_m1 = $BATCH_NUM_PROC_TOT - NUM_PROC_OCE )) |
---|
1458 | if [ $1 = MPI1 ]; then |
---|
1459 | cat <<EOF > run_file |
---|
1460 | #!/bin/bash |
---|
1461 | if [ \$SLURM_PROCID -eq 0 ] |
---|
1462 | then ./oasis ; |
---|
1463 | elif ( [ \$SLURM_PROCID -ge 1 ] && [ \$SLURM_PROCID -lt ${nb_tot_m1} ] ) |
---|
1464 | then ./lmdz.x ; |
---|
1465 | else ./opa.xx ; |
---|
1466 | fi |
---|
1467 | EOF |
---|
1468 | config_UserChoices_JobRunOptions='"-n ${BATCH_NUM_PROC_TOT}"' |
---|
1469 | IGCM_sys_Chmod u+x run_file |
---|
1470 | fi |
---|
1471 | IGCM_debug_PopStack "IGCM_sys_build_run_file" |
---|
1472 | |
---|
1473 | } |
---|